Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:44:18 (26758): wrapper (7.7.26015): starting
07:44:18 (26758): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 07:44:18] Arguments: --nthreads 12
[2025-10-12 07:44:18] Threads: 12
[2025-10-12 07:44:18] Checking for CVMFS
[2025-10-12 07:44:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:44:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:44:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:44:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:44:19] 2.11.2.0 25590 123519 92508 151619 1 57 14867022 20275201 1 130560 2 77566971 99.991 3955729 22015 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:44:19] CVMFS is ok
[2025-10-12 07:44:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:44:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:44:19] Further information can be found at the LHC@home message board.
[2025-10-12 07:44:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:44:19] Checking for apptainer binary...
[2025-10-12 07:44:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:44:19] Running /usr/bin/apptainer --version
[2025-10-12 07:44:19] apptainer version 1.3.2-1.el7
[2025-10-12 07:44:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:44:20] c-205-24.aglt2.org
[2025-10-12 07:44:20] apptainer works
[2025-10-12 07:44:20] Set ATHENA_PROC_NUMBER=12
[2025-10-12 07:44:20] Set ATHENA_CORE_NUMBER=12
[2025-10-12 07:44:20] Starting ATLAS job with PandaID=6839588823
[2025-10-12 07:44:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:56:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:56:00]  mtime=0
[2025-10-12 08:56:00]  protocol_id=None
[2025-10-12 08:56:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 08:56:00]  replicas=None
[2025-10-12 08:56:00]  scope=mc23_13p6TeV
[2025-10-12 08:56:00]  status=None
[2025-10-12 08:56:00]  status_code=0
[2025-10-12 08:56:00]  storage_token=
[2025-10-12 08:56:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839588823/log.46676269._072015.job.log.tgz.1
[2025-10-12 08:56:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/45/log.46676269._072015.job.log.tgz.1
[2025-10-12 08:56:00]  workdir=None
[2025-10-12 08:56:00] ]
[2025-10-12 08:56:00] 2025-10-12 12:55:22,351 | INFO     | transferring file log.46676269._072015.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839588823/log.46676269._072015.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 08:56:00] 2025-10-12 12:55:22,352 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839588823/log.46676269._072015.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._072015.job
[2025-10-12 08:56:00] 2025-10-12 12:55:22,379 | INFO     | adding to output.list: log.46676269._072015.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/45/log.46676269._072015.job.log.tg
[2025-10-12 08:56:00] 2025-10-12 12:55:22,380 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 08:56:00] 2025-10-12 12:55:22,380 | INFO     | summary of transferred files:
[2025-10-12 08:56:00] 2025-10-12 12:55:22,380 | INFO     |  -- lfn=log.46676269._072015.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 08:56:00] 2025-10-12 12:55:22,381 | INFO     | stage-out finished correctly
[2025-10-12 08:56:00] 2025-10-12 12:55:22,464 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 08:56:00] 2025-10-12 12:55:22,548 | INFO     | job 6839588823 has state=finished
[2025-10-12 08:56:00] 2025-10-12 12:55:22,548 | INFO     | preparing for final server update for job 6839588823 in state='finished'
[2025-10-12 08:56:00] 2025-10-12 12:55:22,549 | INFO     | this job has now completed (state=finished)
[2025-10-12 08:56:00] 2025-10-12 12:55:22,549 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 08:56:00] 2025-10-12 12:55:22,549 | INFO     | log transfer has been attempted: DONE
[2025-10-12 08:56:00] 2025-10-12 12:55:22,549 | INFO     | job 6839588823 has finished - writing final server update
[2025-10-12 08:56:00] 2025-10-12 12:55:22,550 | INFO     | total number of processed events: 400 (read)
[2025-10-12 08:56:00] 2025-10-12 12:55:22,551 | INFO     | executing command: lscpu
[2025-10-12 08:56:00] 2025-10-12 12:55:22,576 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 08:56:00] 2025-10-12 12:55:23,093 | INFO     | time since job start (4248s) is within the limit (172800.0s)
[2025-10-12 08:56:00] 2025-10-12 12:55:25,098 | INFO     | time since job start (4250s) is within the limit (172800.0s)
[2025-10-12 08:56:00] 2025-10-12 12:55:25,661 | WARNING  | process 4530 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 08:56:00] 2025-10-12 12:55:25,661 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839588823/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:56:00] 2025-10-12 12:55:25,752 | INFO     | number of running child processes to parent process 4530: 1
[2025-10-12 08:56:00] 2025-10-12 12:55:25,752 | INFO     | maximum number of monitored processes: 6
[2025-10-12 08:56:00] 2025-10-12 12:55:27,103 | INFO     | time since job start (4252s) is within the limit (172800.0s)
[2025-10-12 08:56:00] 2025-10-12 12:55:27,269 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 08:56:00] 2025-10-12 12:55:27,273 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 08:56:00] 2025-10-12 12:55:27,275 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839588823/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:56:00] 2025-10-12 12:55:27,276 | INFO     | extracted standard info from prmon json
[2025-10-12 08:56:00] 2025-10-12 12:55:27,276 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:56:00] 2025-10-12 12:55:27,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:56:00] 2025-10-12 12:55:27,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:56:00] 2025-10-12 12:55:27,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:56:00] 2025-10-12 12:55:27,279 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:56:00] 2025-10-12 12:55:27,279 | INFO     | sum of square deviations: 77515872.0
[2025-10-12 08:56:00] 2025-10-12 12:55:27,279 | INFO     | sum of deviations: -7225762808.000001
[2025-10-12 08:56:00] 2025-10-12 12:55:27,279 | INFO     | mean x: 1760271700.0
[2025-10-12 08:56:00] 2025-10-12 12:55:27,280 | INFO     | mean y: 2780293.888888889
[2025-10-12 08:56:00] 2025-10-12 12:55:27,280 | INFO     | -- intersect: 164089249989.21704
[2025-10-12 08:56:00] 2025-10-12 12:55:27,280 | INFO     | intersect: 164089249989.21704
[2025-10-12 08:56:00] 2025-10-12 12:55:27,280 | INFO     | chi2: 0.04950822940131357
[2025-10-12 08:56:00] 2025-10-12 12:55:27,280 | INFO     | -- intersect: 164089249989.21704
[2025-10-12 08:56:00] 2025-10-12 12:55:27,280 | INFO     | current memory leak: -93.22 B/s (using 63 data points, chi2=0.05)
[2025-10-12 08:56:00] 2025-10-12 12:55:27,281 | INFO     | could have reported an average CPU frequency of 2036 MHz (6 samples)
[2025-10-12 08:56:00] 2025-10-12 12:55:27,281 | INFO     | ..............................
[2025-10-12 08:56:00] 2025-10-12 12:55:27,281 | INFO     | . Timing measurements:
[2025-10-12 08:56:00] 2025-10-12 12:55:27,281 | INFO     | . get job = 0 s
[2025-10-12 08:56:00] 2025-10-12 12:55:27,281 | INFO     | . initial setup = 2 s
[2025-10-12 08:56:00] 2025-10-12 12:55:27,281 | INFO     | . payload setup = 7 s
[2025-10-12 08:56:00] 2025-10-12 12:55:27,281 | INFO     | . stage-in = 0 s
[2025-10-12 08:56:00] 2025-10-12 12:55:27,281 | INFO     | . payload execution = 4221 s
[2025-10-12 08:56:00] 2025-10-12 12:55:27,281 | INFO     | . stage-out = 1 s
[2025-10-12 08:56:00] 2025-10-12 12:55:27,282 | INFO     | . log creation = 0 s
[2025-10-12 08:56:00] 2025-10-12 12:55:27,282 | INFO     | ..............................
[2025-10-12 08:56:00] 2025-10-12 12:55:27,823 | INFO     | 
[2025-10-12 08:56:00] 2025-10-12 12:55:27,823 | INFO     | job summary report
[2025-10-12 08:56:00] 2025-10-12 12:55:27,823 | INFO     | --------------------------------------------------
[2025-10-12 08:56:00] 2025-10-12 12:55:27,823 | INFO     | PanDA job id: 6839588823
[2025-10-12 08:56:00] 2025-10-12 12:55:27,824 | INFO     | task id: 46676269
[2025-10-12 08:56:00] 2025-10-12 12:55:27,824 | INFO     | errors: (none)
[2025-10-12 08:56:00] 2025-10-12 12:55:27,824 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:56:00] 2025-10-12 12:55:27,824 | INFO     | pilot state: finished 
[2025-10-12 08:56:00] 2025-10-12 12:55:27,824 | INFO     | transexitcode: 0
[2025-10-12 08:56:00] 2025-10-12 12:55:27,824 | INFO     | exeerrorcode: 0
[2025-10-12 08:56:00] 2025-10-12 12:55:27,825 | INFO     | exeerrordiag: 
[2025-10-12 08:56:00] 2025-10-12 12:55:27,825 | INFO     | exitcode: 0
[2025-10-12 08:56:00] 2025-10-12 12:55:27,825 | INFO     | exitmsg: OK
[2025-10-12 08:56:00] 2025-10-12 12:55:27,825 | INFO     | cpuconsumptiontime: 45764 s
[2025-10-12 08:56:00] 2025-10-12 12:55:27,825 | INFO     | nevents: 400
[2025-10-12 08:56:00] 2025-10-12 12:55:27,825 | INFO     | neventsw: 0
[2025-10-12 08:56:00] 2025-10-12 12:55:27,826 | INFO     | pid: 4530
[2025-10-12 08:56:00] 2025-10-12 12:55:27,826 | INFO     | pgrp: 4530
[2025-10-12 08:56:00] 2025-10-12 12:55:27,826 | INFO     | corecount: 12
[2025-10-12 08:56:00] 2025-10-12 12:55:27,826 | INFO     | event service: False
[2025-10-12 08:56:00] 2025-10-12 12:55:27,826 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 4229: 2375127, 4231: 2384309, 4235: 2384447}
[2025-10-12 08:56:00] 2025-10-12 12:55:27,826 | INFO     | --------------------------------------------------
[2025-10-12 08:56:00] 2025-10-12 12:55:27,826 | INFO     | 
[2025-10-12 08:56:00] 2025-10-12 12:55:27,827 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 08:56:00] 2025-10-12 12:55:27,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,850 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,850 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,851 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,853 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,853 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:56:00] 2025-10-12 12:55:27,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,853 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:56:00] 2025-10-12 12:55:27,854 | INFO     | job 6839588823 has completed (purged errors)
[2025-10-12 08:56:00] 2025-10-12 12:55:27,854 | INFO     | overall cleanup function is called
[2025-10-12 08:56:00] 2025-10-12 12:55:28,862 | INFO     | --- collectZombieJob: --- 10, [4530]
[2025-10-12 08:56:00] 2025-10-12 12:55:28,862 | INFO     | zombie collector waiting for pid 4530
[2025-10-12 08:56:00] 2025-10-12 12:55:28,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:56:00] 2025-10-12 12:55:28,863 | INFO     | collected zombie processes
[2025-10-12 08:56:00] 2025-10-12 12:55:28,863 | INFO     | will attempt to kill all subprocesses of pid=4530
[2025-10-12 08:56:00] 2025-10-12 12:55:28,954 | INFO     | process IDs to be killed: [4530] (in reverse order)
[2025-10-12 08:56:00] 2025-10-12 12:55:29,007 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:56:00] 2025-10-12 12:55:29,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:56:00] 2025-10-12 12:55:29,010 | INFO     | did not find any defunct processes belonging to 4530
[2025-10-12 08:56:00] 2025-10-12 12:55:29,012 | INFO     | did not find any defunct processes belonging to 4530
[2025-10-12 08:56:00] 2025-10-12 12:55:29,012 | INFO     | ready for new job
[2025-10-12 08:56:00] 2025-10-12 12:55:29,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:56:00] 2025-10-12 12:55:29,014 | INFO     | ***************************************
[2025-10-12 08:56:00] 2025-10-12 12:55:29,014 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:56:00] 2025-10-12 12:55:29,014 | INFO     | ***************************************
[2025-10-12 08:56:00] 2025-10-12 12:55:29,014 | INFO     | 
[2025-10-12 08:56:00] 2025-10-12 12:55:29,014 | INFO     | architecture information:
[2025-10-12 08:56:00] 2025-10-12 12:55:29,015 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:56:00] 2025-10-12 12:55:29,030 | INFO     | cat /etc/os-release:
[2025-10-12 08:56:00] NAME="CentOS Linux"
[2025-10-12 08:56:00] VERSION="7 (Core)"
[2025-10-12 08:56:00] ID="centos"
[2025-10-12 08:56:00] ID_LIKE="rhel fedora"
[2025-10-12 08:56:00] VERSION_ID="7"
[2025-10-12 08:56:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:56:00] ANSI_COLOR="0;31"
[2025-10-12 08:56:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:56:00] HOME_URL="https://www.centos.org/"
[2025-10-12 08:56:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:56:00] 
[2025-10-12 08:56:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:56:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:56:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:56:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:56:00] 
[2025-10-12 08:56:00] 2025-10-12 12:55:29,030 | INFO     | ***************************************
[2025-10-12 08:56:00] 2025-10-12 12:55:29,533 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 08:56:00] 2025-10-12 12:55:29,551 | INFO     | sufficient remaining disk space (29370613760 B)
[2025-10-12 08:56:00] 2025-10-12 12:55:29,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:56:00] 2025-10-12 12:55:29,552 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:56:00] 2025-10-12 12:55:29,552 | INFO     | update_server=False
[2025-10-12 08:56:00] 2025-10-12 12:55:29,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:56:00] 2025-10-12 12:55:29,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:56:00] 2025-10-12 12:55:29,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:56:00] 2025-10-12 12:55:29,553 | INFO     | aborting loop
[2025-10-12 08:56:00] 2025-10-12 12:55:29,802 | INFO     | job.realtimelogging is not enabled
[2025-10-12 08:56:00] 2025-10-12 12:55:30,403 | INFO     | all job control threads have been joined
[2025-10-12 08:56:00] 2025-10-12 12:55:30,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:56:00] 2025-10-12 12:55:30,481 | INFO     | all payload control threads have been joined
[2025-10-12 08:56:00] 2025-10-12 12:55:30,558 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:30,559 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:30,635 | INFO     | all data control threads have been joined
[2025-10-12 08:56:00] 2025-10-12 12:55:30,807 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:30,808 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:31,107 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:31,183 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:31,275 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:31,325 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:31,408 | INFO     | [job] control thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:31,487 | INFO     | [payload] control thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:31,640 | INFO     | [data] control thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:31,945 | INFO     | [job] validate thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:31,960 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:32,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:56:00] 2025-10-12 12:55:32,480 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:33,386 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:33,559 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:56:00] 2025-10-12 12:55:42,228 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:56:00] 2025-10-12 12:55:43,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120325338944)>', '<ExcThread(monitor, started 140119726081792)>']
[2025-10-12 08:56:00] 2025-10-12 12:55:48,964 | INFO     | all workflow threads have been joined
[2025-10-12 08:56:00] 2025-10-12 12:55:48,964 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:56:00] 2025-10-12 12:55:48,965 | INFO     | traces error code: 0
[2025-10-12 08:56:00] 2025-10-12 12:55:48,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:56:00] 2025-10-12 12:56:00,311 | INFO     | PID=30432 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 08:56:00] 2025-10-12 12:56:00,312 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:56:00] 2025-10-12 12:56:00,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:56:00] 2025-10-12 12:56:00,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:56:00] 2025-10-12 12:56:00,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:56:00] 2025-10-12 12:56:00,312 | INFO     | [monitor] control thread has ended
[2025-10-12 08:56:00] 2025-10-12 12:56:00,400 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:56:00] 2025-10-12 12:56:00,404 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:56:00] 2025-10-12 12:56:00,408 [wrapper] pilotpid: 30432
[2025-10-12 08:56:00] 2025-10-12 12:56:00,412 [wrapper] Pilot exit status: 0
[2025-10-12 08:56:00] 2025-10-12 12:56:00,429 [wrapper] pandaids: 6839588823
[2025-10-12 08:56:00] 2025-10-12 12:56:00,471 [wrapper] cleanup supervisor_pilot 23244 30433
[2025-10-12 08:56:00] 2025-10-12 12:56:00,475 [wrapper] Test setup, not cleaning
[2025-10-12 08:56:00] 2025-10-12 12:56:00,479 [wrapper] apfmon messages muted
[2025-10-12 08:56:00] 2025-10-12 12:56:00,483 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:56:00] 2025-10-12 12:56:00,487 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:56:00]  *** Error codes and diagnostics ***
[2025-10-12 08:56:00]     "exeErrorCode": 0,
[2025-10-12 08:56:00]     "exeErrorDiag": "",
[2025-10-12 08:56:00]     "pilotErrorCode": 0,
[2025-10-12 08:56:00]     "pilotErrorDiag": "",
[2025-10-12 08:56:00]  *** Listing of results directory ***
[2025-10-12 08:56:00] total 406612
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 01:26 pilot3.tar.gz
[2025-10-12 08:56:00] -rwx------ 1 boincer umatlas     36292 Oct 12 01:29 runpilot2-wrapper.sh
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 01:29 queuedata.json
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas       100 Oct 12 07:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:56:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 07:44 run_atlas
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas       105 Oct 12 07:44 job.xml
[2025-10-12 08:56:00] -rw-r--r-- 2 boincer umatlas 219500944 Oct 12 07:44 EVNT.46676267._004323.pool.root.1
[2025-10-12 08:56:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:44 start_atlas.sh
[2025-10-12 08:56:00] drwxrwx--x 2 boincer umatlas      4096 Oct 12 07:44 shared
[2025-10-12 08:56:00] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 07:44 input.tar.gz
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas         0 Oct 12 07:44 boinc_lockfile
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 07:44 pandaJob.out
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas    975520 Oct 12 07:44 agis_schedconf.cvmfs.json
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas   1560580 Oct 12 07:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:56:00] drwx------ 5 boincer umatlas      4096 Oct 12 07:44 pilot3
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 08:46 init_data.xml
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas 190935487 Oct 12 08:54 HITS.46676269._072015.pool.root.1
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas       529 Oct 12 08:55 boinc_task_state.xml
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas      1048 Oct 12 08:55 memory_monitor_summary.json
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas    392615 Oct 12 08:55 log.46676269._072015.job.log.tgz.1
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas      7857 Oct 12 08:55 heartbeat.json
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 08:55 boinc_mmap_file
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas        27 Oct 12 08:55 wrapper_checkpoint.txt
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas        95 Oct 12 08:56 pilot_heartbeat.json
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas       745 Oct 12 08:56 pilotlog.txt
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas    619009 Oct 12 08:56 log.46676269._072015.job.log.1
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas       357 Oct 12 08:56 output.list
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas       620 Oct 12 08:56 runtime_log
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas   1034240 Oct 12 08:56 result.tar.gz
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 08:56 runtime_log.err
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas       659 Oct 12 08:56 hdGLDmxo3R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwITMDmUIKGdn.diag
[2025-10-12 08:56:00] -rw-r--r-- 1 boincer umatlas     21654 Oct 12 08:56 stderr.txt
[2025-10-12 08:56:00] HITS file was successfully produced:
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas 190935487 Oct 12 08:54 shared/HITS.pool.root.1
[2025-10-12 08:56:00]  *** Contents of shared directory: ***
[2025-10-12 08:56:00] total 402420
[2025-10-12 08:56:00] -rw-r--r-- 2 boincer umatlas 219500944 Oct 12 07:44 ATLAS.root_0
[2025-10-12 08:56:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:44 start_atlas.sh
[2025-10-12 08:56:00] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 07:44 input.tar.gz
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas 190935487 Oct 12 08:54 HITS.pool.root.1
[2025-10-12 08:56:00] -rw------- 1 boincer umatlas   1034240 Oct 12 08:56 result.tar.gz
08:56:02 (26758): run_atlas exited; CPU time 45735.522237
08:56:02 (26758): called boinc_finish(0)

</stderr_txt>
]]>

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