Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:22:05 (1382330): wrapper (7.7.26015): starting
17:22:05 (1382330): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 17:22:05] Arguments: --nthreads 4
[2025-10-13 17:22:05] Threads: 4
[2025-10-13 17:22:05] Checking for CVMFS
[2025-10-13 17:22:05] No cvmfs_config command found, will try listing directly
[2025-10-13 17:22:05] CVMFS is ok
[2025-10-13 17:22:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:22:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:22:05] Further information can be found at the LHC@home message board.
[2025-10-13 17:22:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:22:05] Checking for apptainer binary...
[2025-10-13 17:22:05] which: no apptainer in ((null))
[2025-10-13 17:22:05] apptainer is not installed, using version from CVMFS
[2025-10-13 17:22:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:22:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-13 17:22:05] apptainer works
[2025-10-13 17:22:05] Set ATHENA_PROC_NUMBER=4
[2025-10-13 17:22:05] Set ATHENA_CORE_NUMBER=4
[2025-10-13 17:22:05] Starting ATLAS job with PandaID=6838230423
[2025-10-13 17:22:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:47:14 (1474004): wrapper (7.7.26015): starting
18:47:14 (1474004): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 18:47:14] Arguments: --nthreads 4
[2025-10-13 18:47:14] Threads: 4
[2025-10-13 18:47:14] This job has been restarted, cleaning up previous attempt
[2025-10-13 18:47:14] Checking for CVMFS
[2025-10-13 18:47:14] No cvmfs_config command found, will try listing directly
[2025-10-13 18:47:15] CVMFS is ok
[2025-10-13 18:47:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:47:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:47:15] Further information can be found at the LHC@home message board.
[2025-10-13 18:47:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:47:15] Checking for apptainer binary...
[2025-10-13 18:47:15] which: no apptainer in ((null))
[2025-10-13 18:47:15] apptainer is not installed, using version from CVMFS
[2025-10-13 18:47:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:47:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-13 18:47:15] apptainer works
[2025-10-13 18:47:15] Set ATHENA_PROC_NUMBER=4
[2025-10-13 18:47:15] Set ATHENA_CORE_NUMBER=4
[2025-10-13 18:47:15] Starting ATLAS job with PandaID=6838230423
[2025-10-13 18:47:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:30:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:30:58] 2025-10-13 19:20:07,295 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:30:58] 2025-10-13 19:20:07,295 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:30:58] 2025-10-13 19:20:07,298 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:30:58] 2025-10-13 19:20:07,299 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 21:30:58] 2025-10-13 19:20:07,300 | INFO     | sum of deviations: -1819681300.9999986
[2025-10-13 21:30:58] 2025-10-13 19:20:07,300 | INFO     | mean x: 1760378618.5
[2025-10-13 21:30:58] 2025-10-13 19:20:07,300 | INFO     | mean y: 2362342.28
[2025-10-13 21:30:58] 2025-10-13 19:20:07,300 | INFO     | -- intersect: 3063398915.462378
[2025-10-13 21:30:58] 2025-10-13 19:20:07,300 | INFO     | intersect: 3063398915.462378
[2025-10-13 21:30:58] 2025-10-13 19:20:07,300 | INFO     | chi2: 1.2960192409143778
[2025-10-13 21:30:58] 2025-10-13 19:20:07,301 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,301 | INFO     | sum of deviations: -2091074083.00001
[2025-10-13 21:30:58] 2025-10-13 19:20:07,301 | INFO     | mean x: 1760378466.0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,302 | INFO     | mean y: 2361952.8206896554
[2025-10-13 21:30:58] 2025-10-13 19:20:07,302 | INFO     | -- intersect: 3896521066.6409664
[2025-10-13 21:30:58] 2025-10-13 19:20:07,302 | INFO     | intersect: 3896521066.6409664
[2025-10-13 21:30:58] 2025-10-13 19:20:07,302 | INFO     | chi2: 1.2924719392238415
[2025-10-13 21:30:58] 2025-10-13 19:20:07,302 | INFO     | current chi2=1.2924719392238415 (change=0.27370748662910105 %)
[2025-10-13 21:30:58] 2025-10-13 19:20:07,302 | INFO     | right removable region: 144
[2025-10-13 21:30:58] 2025-10-13 19:20:07,302 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,303 | INFO     | sum of deviations: -15980826908.999998
[2025-10-13 21:30:58] 2025-10-13 19:20:07,303 | INFO     | mean x: 1760378771.0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,303 | INFO     | mean y: 2383127.3034482757
[2025-10-13 21:30:58] 2025-10-13 19:20:07,303 | INFO     | -- intersect: 29763114247.34488
[2025-10-13 21:30:58] 2025-10-13 19:20:07,304 | INFO     | intersect: 29763114247.34488
[2025-10-13 21:30:58] 2025-10-13 19:20:07,304 | INFO     | chi2: 0.10137862590266586
[2025-10-13 21:30:58] 2025-10-13 19:20:07,304 | INFO     | current chi2=0.10137862590266586 (change=92.17769129483445 %)
[2025-10-13 21:30:58] 2025-10-13 19:20:07,304 | INFO     | sum of square deviations: 850825255.0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,305 | INFO     | sum of deviations: -10817494475.000004
[2025-10-13 21:30:58] 2025-10-13 19:20:07,305 | INFO     | mean x: 1760378923.5
[2025-10-13 21:30:58] 2025-10-13 19:20:07,305 | INFO     | mean y: 2374802.2285714285
[2025-10-13 21:30:58] 2025-10-13 19:20:07,305 | INFO     | -- intersect: 22384043854.668377
[2025-10-13 21:30:58] 2025-10-13 19:20:07,305 | INFO     | intersect: 22384043854.668377
[2025-10-13 21:30:58] 2025-10-13 19:20:07,306 | INFO     | chi2: 0.07358153446311513
[2025-10-13 21:30:58] 2025-10-13 19:20:07,306 | INFO     | current chi2=0.07358153446311513 (change=27.419084833758607 %)
[2025-10-13 21:30:58] 2025-10-13 19:20:07,306 | INFO     | sum of square deviations: 762879420.0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,307 | INFO     | sum of deviations: -7470797734.000001
[2025-10-13 21:30:58] 2025-10-13 19:20:07,307 | INFO     | mean x: 1760379076.0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,307 | INFO     | mean y: 2368993.940740741
[2025-10-13 21:30:58] 2025-10-13 19:20:07,307 | INFO     | -- intersect: 17241575698.405014
[2025-10-13 21:30:58] 2025-10-13 19:20:07,307 | INFO     | intersect: 17241575698.405014
[2025-10-13 21:30:58] 2025-10-13 19:20:07,307 | INFO     | chi2: 0.06323548243436675
[2025-10-13 21:30:58] 2025-10-13 19:20:07,307 | INFO     | current chi2=0.06323548243436675 (change=14.060663594797203 %)
[2025-10-13 21:30:58] 2025-10-13 19:20:07,307 | INFO     | left removable region: 30
[2025-10-13 21:30:58] 2025-10-13 19:20:07,308 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 21:30:58] 2025-10-13 19:20:07,308 | INFO     | sum of deviations: 678493301.0000001
[2025-10-13 21:30:58] 2025-10-13 19:20:07,308 | INFO     | mean x: 1760379350.5
[2025-10-13 21:30:58] 2025-10-13 19:20:07,308 | INFO     | mean y: 2351163.2280701753
[2025-10-13 21:30:58] 2025-10-13 19:20:07,308 | INFO     | -- intersect: -2597762123.231383
[2025-10-13 21:30:58] 2025-10-13 19:20:07,309 | INFO     | intersect: -2597762123.231383
[2025-10-13 21:30:58] 2025-10-13 19:20:07,309 | INFO     | chi2: 0.0015302229211713173
[2025-10-13 21:30:58] 2025-10-13 19:20:07,309 | INFO     | -- intersect: -2597762123.231383
[2025-10-13 21:30:58] 2025-10-13 19:20:07,309 | INFO     | current memory leak: 1.48 B/s (using 114 data points, chi2=0.00)
[2025-10-13 21:30:58] 2025-10-13 19:20:07,309 | INFO     | could have reported an average CPU frequency of 2700 MHz (9 samples)
[2025-10-13 21:30:58] 2025-10-13 19:20:07,310 | INFO     | ..............................
[2025-10-13 21:30:58] 2025-10-13 19:20:07,310 | INFO     | . Timing measurements:
[2025-10-13 21:30:58] 2025-10-13 19:20:07,310 | INFO     | . get job = 0 s
[2025-10-13 21:30:58] 2025-10-13 19:20:07,310 | INFO     | . initial setup = 1 s
[2025-10-13 21:30:58] 2025-10-13 19:20:07,310 | INFO     | . payload setup = 5 s
[2025-10-13 21:30:58] 2025-10-13 19:20:07,310 | INFO     | . stage-in = 0 s
[2025-10-13 21:30:58] 2025-10-13 19:20:07,310 | INFO     | . payload execution = 9124 s
[2025-10-13 21:30:58] 2025-10-13 19:20:07,310 | INFO     | . stage-out = 1 s
[2025-10-13 21:30:58] 2025-10-13 19:20:07,310 | INFO     | . log creation = 0 s
[2025-10-13 21:30:58] 2025-10-13 19:20:07,310 | INFO     | ..............................
[2025-10-13 21:30:58] 2025-10-13 19:20:07,404 | INFO     | 
[2025-10-13 21:30:58] 2025-10-13 19:20:07,404 | INFO     | job summary report
[2025-10-13 21:30:58] 2025-10-13 19:20:07,404 | INFO     | --------------------------------------------------
[2025-10-13 21:30:58] 2025-10-13 19:20:07,405 | INFO     | PanDA job id: 6838230423
[2025-10-13 21:30:58] 2025-10-13 19:20:07,405 | INFO     | task id: 46676269
[2025-10-13 21:30:58] 2025-10-13 19:20:07,405 | INFO     | errors: (none)
[2025-10-13 21:30:58] 2025-10-13 19:20:07,405 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:30:58] 2025-10-13 19:20:07,405 | INFO     | pilot state: finished 
[2025-10-13 21:30:58] 2025-10-13 19:20:07,405 | INFO     | transexitcode: 0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,405 | INFO     | exeerrorcode: 0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,405 | INFO     | exeerrordiag: 
[2025-10-13 21:30:58] 2025-10-13 19:20:07,405 | INFO     | exitcode: 0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,405 | INFO     | exitmsg: OK
[2025-10-13 21:30:58] 2025-10-13 19:20:07,405 | INFO     | cpuconsumptiontime: 34869 s
[2025-10-13 21:30:58] 2025-10-13 19:20:07,406 | INFO     | nevents: 400
[2025-10-13 21:30:58] 2025-10-13 19:20:07,406 | INFO     | neventsw: 0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,406 | INFO     | pid: 1485379
[2025-10-13 21:30:58] 2025-10-13 19:20:07,406 | INFO     | pgrp: 1485379
[2025-10-13 21:30:58] 2025-10-13 19:20:07,406 | INFO     | corecount: 4
[2025-10-13 21:30:58] 2025-10-13 19:20:07,406 | INFO     | event service: False
[2025-10-13 21:30:58] 2025-10-13 19:20:07,406 | INFO     | sizes: {0: 2348868, 5: 2349130, 11: 2349186, 9133: 2377573, 9134: 2377572, 9135: 2386648, 9137: 2386832, 9144: 2387090}
[2025-10-13 21:30:58] 2025-10-13 19:20:07,406 | INFO     | --------------------------------------------------
[2025-10-13 21:30:58] 2025-10-13 19:20:07,406 | INFO     | 
[2025-10-13 21:30:58] 2025-10-13 19:20:07,406 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-10-13 21:30:58] 2025-10-13 19:20:07,428 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,428 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,428 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,428 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:30:58] 2025-10-13 19:20:07,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,430 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:30:58] 2025-10-13 19:20:07,430 | INFO     | job 6838230423 has completed (purged errors)
[2025-10-13 21:30:58] 2025-10-13 19:20:07,430 | INFO     | overall cleanup function is called
[2025-10-13 21:30:58] 2025-10-13 19:20:08,438 | INFO     | --- collectZombieJob: --- 10, [1485379]
[2025-10-13 21:30:58] 2025-10-13 19:20:08,438 | INFO     | zombie collector waiting for pid 1485379
[2025-10-13 21:30:58] 2025-10-13 19:20:08,438 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:30:58] 2025-10-13 19:20:08,438 | INFO     | collected zombie processes
[2025-10-13 21:30:58] 2025-10-13 19:20:08,438 | INFO     | will attempt to kill all subprocesses of pid=1485379
[2025-10-13 21:30:58] 2025-10-13 19:20:08,816 | INFO     | process IDs to be killed: [1485379] (in reverse order)
[2025-10-13 21:30:58] 2025-10-13 19:20:08,920 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:30:58] 2025-10-13 19:20:08,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:30:58] 2025-10-13 19:20:08,933 | INFO     | did not find any defunct processes belonging to 1485379
[2025-10-13 21:30:58] 2025-10-13 19:20:08,944 | INFO     | did not find any defunct processes belonging to 1485379
[2025-10-13 21:30:58] 2025-10-13 19:20:08,944 | INFO     | ready for new job
[2025-10-13 21:30:58] 2025-10-13 19:20:08,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:30:58] 2025-10-13 19:20:08,946 | INFO     | ***************************************
[2025-10-13 21:30:58] 2025-10-13 19:20:08,947 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:30:58] 2025-10-13 19:20:08,947 | INFO     | ***************************************
[2025-10-13 21:30:58] 2025-10-13 19:20:08,947 | INFO     | 
[2025-10-13 21:30:58] 2025-10-13 19:20:08,950 | INFO     | architecture information:
[2025-10-13 21:30:58] 2025-10-13 19:20:08,951 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:30:58] 2025-10-13 19:20:08,967 | INFO     | cat /etc/os-release:
[2025-10-13 21:30:58] NAME="CentOS Linux"
[2025-10-13 21:30:58] VERSION="7 (Core)"
[2025-10-13 21:30:58] ID="centos"
[2025-10-13 21:30:58] ID_LIKE="rhel fedora"
[2025-10-13 21:30:58] VERSION_ID="7"
[2025-10-13 21:30:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:30:58] ANSI_COLOR="0;31"
[2025-10-13 21:30:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:30:58] HOME_URL="https://www.centos.org/"
[2025-10-13 21:30:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:30:58] 
[2025-10-13 21:30:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:30:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:30:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:30:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:30:58] 
[2025-10-13 21:30:58] 2025-10-13 19:20:08,967 | INFO     | ***************************************
[2025-10-13 21:30:58] 2025-10-13 19:20:09,470 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-10-13 21:30:58] 2025-10-13 19:20:09,487 | INFO     | sufficient remaining disk space (695544578048 B)
[2025-10-13 21:30:58] 2025-10-13 19:20:09,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:30:58] 2025-10-13 19:20:09,488 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:30:58] 2025-10-13 19:20:09,488 | INFO     | update_server=False
[2025-10-13 21:30:58] 2025-10-13 19:20:09,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:30:58] 2025-10-13 19:20:09,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:30:58] 2025-10-13 19:20:09,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:30:58] 2025-10-13 19:20:09,490 | INFO     | aborting loop
[2025-10-13 21:30:58] 2025-10-13 19:20:09,752 | INFO     | all payload control threads have been joined
[2025-10-13 21:30:58] 2025-10-13 19:20:10,390 | INFO     | all data control threads have been joined
[2025-10-13 21:30:58] 2025-10-13 19:20:10,492 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:10,494 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:10,758 | INFO     | [payload] control thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:10,781 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:10,835 | INFO     | all job control threads have been joined
[2025-10-13 21:30:58] 2025-10-13 19:20:10,922 | INFO     | [job] validate thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:10,940 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:11,080 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:11,396 | INFO     | [data] control thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:11,429 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:11,495 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:11,495 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:11,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:30:58] 2025-10-13 19:20:11,727 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:11,841 | INFO     | [job] control thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:12,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:30:58] 2025-10-13 19:20:13,419 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:15,525 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:20,192 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:30:58] 2025-10-13 19:20:21,198 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:30:58] 2025-10-13 19:20:39,305 | INFO     | PID=1478415 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:30:58] 2025-10-13 19:20:39,305 | INFO     | .. there are 3 such processes running
[2025-10-13 21:30:58] 2025-10-13 19:20:39,305 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:30:58] 2025-10-13 19:20:39,305 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:30:58] 2025-10-13 19:20:39,305 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:30:58] 2025-10-13 19:20:42,111 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:30:58] 2025-10-13 19:20:42,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22779225921344)>', '<ExcThread(monitor, started 22778994464512)>']
[2025-10-13 21:30:58] 2025-10-13 19:20:43,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:30:58] 2025-10-13 19:20:43,326 | INFO     | [monitor] control thread has ended
[2025-10-13 21:30:58] 2025-10-13 19:20:47,395 | INFO     | all workflow threads have been joined
[2025-10-13 21:30:58] 2025-10-13 19:20:47,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:30:58] 2025-10-13 19:20:47,397 | INFO     | traces error code: 0
[2025-10-13 21:30:58] 2025-10-13 19:20:47,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:30:58] 2025-10-13 19:20:47,527 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:30:58] 2025-10-13 19:20:47,530 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:30:58] 2025-10-13 19:20:47,532 [wrapper] pilotpid: 1478415
[2025-10-13 21:30:58] 2025-10-13 19:20:47,535 [wrapper] Pilot exit status: 0
[2025-10-13 21:30:58] 2025-10-13 19:20:47,545 [wrapper] pandaids: 6838230423 6838230423
[2025-10-13 21:30:58] 2025-10-13 19:20:47,615 [wrapper] cleanup supervisor_pilot 1677404 1478416
[2025-10-13 21:30:58] 2025-10-13 19:20:47,618 [wrapper] Test setup, not cleaning
[2025-10-13 21:30:58] 2025-10-13 19:20:47,621 [wrapper] apfmon messages muted
[2025-10-13 21:30:58] 2025-10-13 19:20:47,624 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:30:58] 2025-10-13 19:20:47,626 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:30:58]  *** Error codes and diagnostics ***
[2025-10-13 21:30:58]     "exeErrorCode": 0,
[2025-10-13 21:30:58]     "exeErrorDiag": "",
[2025-10-13 21:30:58]     "pilotErrorCode": 0,
[2025-10-13 21:30:58]     "pilotErrorDiag": "",
[2025-10-13 21:30:58]  *** Listing of results directory ***
[2025-10-13 21:30:58] total 625744
[2025-10-13 21:30:58] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc    557409 Oct 11 10:32 pilot3.tar.gz
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc      5112 Oct 11 10:38 queuedata.json
[2025-10-13 21:30:58] -rwx------ 1 boinc boinc     36292 Oct 11 10:38 runpilot2-wrapper.sh
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:30:58] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:21 run_atlas
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:21 job.xml
[2025-10-13 21:30:58] -rw-r--r-- 3 boinc boinc 221970536 Oct 13 17:22 EVNT.46676267._002181.pool.root.1
[2025-10-13 21:30:58] -rw-r--r-- 3 boinc boinc 221970536 Oct 13 17:22 ATLAS.root_0
[2025-10-13 21:30:58] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:22 start_atlas.sh
[2025-10-13 21:30:58] drwxrwx--x 2 boinc boinc      4096 Oct 13 17:22 shared
[2025-10-13 21:30:58] -rw-r--r-- 2 boinc boinc    569675 Oct 13 17:22 input.tar.gz
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:22 boinc_lockfile
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc      6641 Oct 13 18:47 init_data.xml
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc      2550 Oct 13 18:47 pandaJob.out
[2025-10-13 21:30:58] -rw------- 1 boinc boinc    972783 Oct 13 18:47 agis_schedconf.cvmfs.json
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:19 boinc_task_state.xml
[2025-10-13 21:30:58] -rw------- 1 boinc boinc 189609251 Oct 13 21:19 HITS.46676269._054371.pool.root.1
[2025-10-13 21:30:58] -rw------- 1 boinc boinc        97 Oct 13 21:19 pilot_heartbeat.json
[2025-10-13 21:30:58] -rw------- 1 boinc boinc      1051 Oct 13 21:19 memory_monitor_summary.json
[2025-10-13 21:30:58] -rw------- 1 boinc boinc   1560580 Oct 13 21:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:30:58] -rw------- 1 boinc boinc    338936 Oct 13 21:19 log.46676269._054371.job.log.tgz.1
[2025-10-13 21:30:58] -rw------- 1 boinc boinc      7859 Oct 13 21:20 heartbeat.json
[2025-10-13 21:30:58] -rw------- 1 boinc boinc      4905 Oct 13 21:20 pilotlog.txt
[2025-10-13 21:30:58] -rw------- 1 boinc boinc   1307722 Oct 13 21:20 log.46676269._054371.job.log.1
[2025-10-13 21:30:58] -rw------- 1 boinc boinc       357 Oct 13 21:20 output.list
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:20 runtime_log
[2025-10-13 21:30:58] -rw------- 1 boinc boinc   1669120 Oct 13 21:20 result.tar.gz
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc      9146 Oct 13 21:20 runtime_log.err
[2025-10-13 21:30:58] -rw------- 1 boinc boinc       793 Oct 13 21:20 DQJLDmCIkR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYsfNDmSSAh2m.diag
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc        26 Oct 13 21:30 wrapper_checkpoint.txt
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:30 boinc_mmap_file
[2025-10-13 21:30:58] -rw-r--r-- 1 boinc boinc     22595 Oct 13 21:30 stderr.txt
[2025-10-13 21:30:58] HITS file was successfully produced:
[2025-10-13 21:30:58] -rw------- 1 boinc boinc 189609251 Oct 13 21:19 shared/HITS.pool.root.1
[2025-10-13 21:30:58]  *** Contents of shared directory: ***
[2025-10-13 21:30:58] total 404156
[2025-10-13 21:30:58] -rw-r--r-- 3 boinc boinc 221970536 Oct 13 17:22 ATLAS.root_0
[2025-10-13 21:30:58] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:22 start_atlas.sh
[2025-10-13 21:30:58] -rw-r--r-- 2 boinc boinc    569675 Oct 13 17:22 input.tar.gz
[2025-10-13 21:30:58] -rw------- 1 boinc boinc 189609251 Oct 13 21:19 HITS.pool.root.1
[2025-10-13 21:30:58] -rw------- 1 boinc boinc   1669120 Oct 13 21:20 result.tar.gz
21:31:00 (1474004): run_atlas exited; CPU time 35280.382190
21:31:00 (1474004): called boinc_finish(0)

</stderr_txt>
]]>

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