Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:35:08 (25963): wrapper (7.7.26015): starting
07:35:08 (25963): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:35:08] Arguments: --nthreads 8
[2025-10-12 07:35:08] Threads: 8
[2025-10-12 07:35:08] Checking for CVMFS
[2025-10-12 07:35:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:35:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:35:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:35:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:35:09] 2.11.2.0 2893 861 66304 151619 1 57 14198784 20275201 1 130560 0 602294 99.988 31949 34539 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:35:09] CVMFS is ok
[2025-10-12 07:35:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:35:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:35:09] Further information can be found at the LHC@home message board.
[2025-10-12 07:35:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:35:09] Checking for apptainer binary...
[2025-10-12 07:35:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:35:09] Running /usr/bin/apptainer --version
[2025-10-12 07:35:09] apptainer version 1.3.2-1.el7
[2025-10-12 07:35:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:35:11] c-204-22.aglt2.org
[2025-10-12 07:35:11] apptainer works
[2025-10-12 07:35:11] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:35:11] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:35:11] Starting ATLAS job with PandaID=6839591245
[2025-10-12 07:35:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:33:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:33:46] 2025-10-12 13:32:47,122 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839591245/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:33:46] 2025-10-12 13:32:47,221 | INFO     | number of running child processes to parent process 4007: 1
[2025-10-12 09:33:46] 2025-10-12 13:32:47,221 | INFO     | maximum number of monitored processes: 6
[2025-10-12 09:33:46] 2025-10-12 13:32:48,095 | INFO     | time since job start (7040s) is within the limit (172800.0s)
[2025-10-12 09:33:46] 2025-10-12 13:32:49,334 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 09:33:46] 2025-10-12 13:32:49,337 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-10-12 09:33:46] 2025-10-12 13:32:49,339 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839591245/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:33:46] 2025-10-12 13:32:49,340 | INFO     | extracted standard info from prmon json
[2025-10-12 09:33:46] 2025-10-12 13:32:49,340 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:33:46] 2025-10-12 13:32:49,340 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:33:46] 2025-10-12 13:32:49,341 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:33:46] 2025-10-12 13:32:49,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:33:46] 2025-10-12 13:32:49,344 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:33:46] 2025-10-12 13:32:49,345 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 09:33:46] 2025-10-12 13:32:49,345 | INFO     | sum of deviations: -1743748623.0000005
[2025-10-12 09:33:46] 2025-10-12 13:32:49,345 | INFO     | mean x: 1760272437.0
[2025-10-12 09:33:46] 2025-10-12 13:32:49,345 | INFO     | mean y: 2566454.3130434784
[2025-10-12 09:33:46] 2025-10-12 13:32:49,346 | INFO     | -- intersect: 6511722175.304593
[2025-10-12 09:33:46] 2025-10-12 13:32:49,346 | INFO     | intersect: 6511722175.304593
[2025-10-12 09:33:46] 2025-10-12 13:32:49,346 | INFO     | chi2: 1.5549149366966342
[2025-10-12 09:33:46] 2025-10-12 13:32:49,346 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 09:33:46] 2025-10-12 13:32:49,347 | INFO     | sum of deviations: -1184159022.999996
[2025-10-12 09:33:46] 2025-10-12 13:32:49,347 | INFO     | mean x: 1760272284.5
[2025-10-12 09:33:46] 2025-10-12 13:32:49,347 | INFO     | mean y: 2567904.690909091
[2025-10-12 09:33:46] 2025-10-12 13:32:49,347 | INFO     | -- intersect: 5053473993.147568
[2025-10-12 09:33:46] 2025-10-12 13:32:49,347 | INFO     | intersect: 5053473993.147568
[2025-10-12 09:33:46] 2025-10-12 13:32:49,347 | INFO     | chi2: 1.5565362612220417
[2025-10-12 09:33:46] 2025-10-12 13:32:49,348 | INFO     | current chi2=1.5565362612220417 (change=-0.10427094673435841 %)
[2025-10-12 09:33:46] 2025-10-12 13:32:49,348 | INFO     | right removable region: 109
[2025-10-12 09:33:46] 2025-10-12 13:32:49,348 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 09:33:46] 2025-10-12 13:32:49,349 | INFO     | sum of deviations: -18563805815.5
[2025-10-12 09:33:46] 2025-10-12 13:32:49,349 | INFO     | mean x: 1760272589.5
[2025-10-12 09:33:46] 2025-10-12 13:32:49,349 | INFO     | mean y: 2609139.7
[2025-10-12 09:33:46] 2025-10-12 13:32:49,349 | INFO     | -- intersect: 79184589130.24124
[2025-10-12 09:33:46] 2025-10-12 13:32:49,349 | INFO     | intersect: 79184589130.24124
[2025-10-12 09:33:46] 2025-10-12 13:32:49,349 | INFO     | chi2: 0.13130559241685405
[2025-10-12 09:33:46] 2025-10-12 13:32:49,349 | INFO     | current chi2=0.13130559241685405 (change=91.55544851245635 %)
[2025-10-12 09:33:46] 2025-10-12 13:32:49,350 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 09:33:46] 2025-10-12 13:32:49,350 | INFO     | sum of deviations: -18422089364.999996
[2025-10-12 09:33:46] 2025-10-12 13:32:49,350 | INFO     | mean x: 1760272742.0
[2025-10-12 09:33:46] 2025-10-12 13:32:49,350 | INFO     | mean y: 2608580.123809524
[2025-10-12 09:33:46] 2025-10-12 13:32:49,351 | INFO     | -- intersect: 90349230960.5154
[2025-10-12 09:33:46] 2025-10-12 13:32:49,351 | INFO     | intersect: 90349230960.5154
[2025-10-12 09:33:46] 2025-10-12 13:32:49,351 | INFO     | chi2: 0.10318331182868763
[2025-10-12 09:33:46] 2025-10-12 13:32:49,351 | INFO     | current chi2=0.10318331182868763 (change=21.41742790275604 %)
[2025-10-12 09:33:46] 2025-10-12 13:32:49,351 | INFO     | left removable region: 20
[2025-10-12 09:33:46] 2025-10-12 13:32:49,351 | INFO     | sum of square deviations: 218571540.0
[2025-10-12 09:33:46] 2025-10-12 13:32:49,352 | INFO     | sum of deviations: -11757395651.000002
[2025-10-12 09:33:46] 2025-10-12 13:32:49,352 | INFO     | mean x: 1760272864.0
[2025-10-12 09:33:46] 2025-10-12 13:32:49,352 | INFO     | mean y: 2593500.191011236
[2025-10-12 09:33:46] 2025-10-12 13:32:49,352 | INFO     | -- intersect: 94691154123.25711
[2025-10-12 09:33:46] 2025-10-12 13:32:49,352 | INFO     | intersect: 94691154123.25711
[2025-10-12 09:33:46] 2025-10-12 13:32:49,353 | INFO     | chi2: 0.09456728553771092
[2025-10-12 09:33:46] 2025-10-12 13:32:49,353 | INFO     | -- intersect: 94691154123.25711
[2025-10-12 09:33:46] 2025-10-12 13:32:49,353 | INFO     | current memory leak: -53.79 B/s (using 89 data points, chi2=0.09)
[2025-10-12 09:33:46] 2025-10-12 13:32:49,353 | INFO     | could have reported an average CPU frequency of 1959 MHz (7 samples)
[2025-10-12 09:33:46] 2025-10-12 13:32:49,353 | INFO     | ..............................
[2025-10-12 09:33:46] 2025-10-12 13:32:49,354 | INFO     | . Timing measurements:
[2025-10-12 09:33:46] 2025-10-12 13:32:49,354 | INFO     | . get job = 0 s
[2025-10-12 09:33:46] 2025-10-12 13:32:49,354 | INFO     | . initial setup = 2 s
[2025-10-12 09:33:46] 2025-10-12 13:32:49,354 | INFO     | . payload setup = 8 s
[2025-10-12 09:33:46] 2025-10-12 13:32:49,354 | INFO     | . stage-in = 0 s
[2025-10-12 09:33:46] 2025-10-12 13:32:49,354 | INFO     | . payload execution = 7003 s
[2025-10-12 09:33:46] 2025-10-12 13:32:49,354 | INFO     | . stage-out = 1 s
[2025-10-12 09:33:46] 2025-10-12 13:32:49,354 | INFO     | . log creation = 0 s
[2025-10-12 09:33:46] 2025-10-12 13:32:49,354 | INFO     | ..............................
[2025-10-12 09:33:46] 2025-10-12 13:32:49,581 | INFO     | 
[2025-10-12 09:33:46] 2025-10-12 13:32:49,581 | INFO     | job summary report
[2025-10-12 09:33:46] 2025-10-12 13:32:49,581 | INFO     | --------------------------------------------------
[2025-10-12 09:33:46] 2025-10-12 13:32:49,581 | INFO     | PanDA job id: 6839591245
[2025-10-12 09:33:46] 2025-10-12 13:32:49,582 | INFO     | task id: 46676269
[2025-10-12 09:33:46] 2025-10-12 13:32:49,582 | INFO     | errors: (none)
[2025-10-12 09:33:46] 2025-10-12 13:32:49,582 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:33:46] 2025-10-12 13:32:49,582 | INFO     | pilot state: finished 
[2025-10-12 09:33:46] 2025-10-12 13:32:49,582 | INFO     | transexitcode: 0
[2025-10-12 09:33:46] 2025-10-12 13:32:49,582 | INFO     | exeerrorcode: 0
[2025-10-12 09:33:46] 2025-10-12 13:32:49,583 | INFO     | exeerrordiag: 
[2025-10-12 09:33:46] 2025-10-12 13:32:49,583 | INFO     | exitcode: 0
[2025-10-12 09:33:46] 2025-10-12 13:32:49,583 | INFO     | exitmsg: OK
[2025-10-12 09:33:46] 2025-10-12 13:32:49,583 | INFO     | cpuconsumptiontime: 51915 s
[2025-10-12 09:33:46] 2025-10-12 13:32:49,583 | INFO     | nevents: 400
[2025-10-12 09:33:46] 2025-10-12 13:32:49,583 | INFO     | neventsw: 0
[2025-10-12 09:33:46] 2025-10-12 13:32:49,583 | INFO     | pid: 4007
[2025-10-12 09:33:46] 2025-10-12 13:32:49,583 | INFO     | pgrp: 4007
[2025-10-12 09:33:46] 2025-10-12 13:32:49,584 | INFO     | corecount: 8
[2025-10-12 09:33:46] 2025-10-12 13:32:49,584 | INFO     | event service: False
[2025-10-12 09:33:46] 2025-10-12 13:32:49,584 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 11: 2349175, 7015: 2376368, 7016: 2385366, 7017: 2385550, 7024: 2385744}
[2025-10-12 09:33:46] 2025-10-12 13:32:49,584 | INFO     | --------------------------------------------------
[2025-10-12 09:33:46] 2025-10-12 13:32:49,584 | INFO     | 
[2025-10-12 09:33:46] 2025-10-12 13:32:49,584 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:33:46] 2025-10-12 13:32:49,612 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,613 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,613 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,613 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,616 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:33:46] 2025-10-12 13:32:49,616 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,616 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:33:46] 2025-10-12 13:32:49,616 | INFO     | job 6839591245 has completed (purged errors)
[2025-10-12 09:33:46] 2025-10-12 13:32:49,617 | INFO     | overall cleanup function is called
[2025-10-12 09:33:46] 2025-10-12 13:32:50,625 | INFO     | --- collectZombieJob: --- 10, [4007]
[2025-10-12 09:33:46] 2025-10-12 13:32:50,625 | INFO     | zombie collector waiting for pid 4007
[2025-10-12 09:33:46] 2025-10-12 13:32:50,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:33:46] 2025-10-12 13:32:50,625 | INFO     | collected zombie processes
[2025-10-12 09:33:46] 2025-10-12 13:32:50,625 | INFO     | will attempt to kill all subprocesses of pid=4007
[2025-10-12 09:33:46] 2025-10-12 13:32:50,714 | INFO     | process IDs to be killed: [4007] (in reverse order)
[2025-10-12 09:33:46] 2025-10-12 13:32:50,767 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:33:46] 2025-10-12 13:32:50,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:33:46] 2025-10-12 13:32:50,772 | INFO     | did not find any defunct processes belonging to 4007
[2025-10-12 09:33:46] 2025-10-12 13:32:50,775 | INFO     | did not find any defunct processes belonging to 4007
[2025-10-12 09:33:46] 2025-10-12 13:32:50,775 | INFO     | ready for new job
[2025-10-12 09:33:46] 2025-10-12 13:32:50,776 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:33:46] 2025-10-12 13:32:50,777 | INFO     | ***************************************
[2025-10-12 09:33:46] 2025-10-12 13:32:50,777 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:33:46] 2025-10-12 13:32:50,777 | INFO     | ***************************************
[2025-10-12 09:33:46] 2025-10-12 13:32:50,778 | INFO     | 
[2025-10-12 09:33:46] 2025-10-12 13:32:50,778 | INFO     | architecture information:
[2025-10-12 09:33:46] 2025-10-12 13:32:50,779 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:33:46] 2025-10-12 13:32:50,798 | INFO     | cat /etc/os-release:
[2025-10-12 09:33:46] NAME="CentOS Linux"
[2025-10-12 09:33:46] VERSION="7 (Core)"
[2025-10-12 09:33:46] ID="centos"
[2025-10-12 09:33:46] ID_LIKE="rhel fedora"
[2025-10-12 09:33:46] VERSION_ID="7"
[2025-10-12 09:33:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:33:46] ANSI_COLOR="0;31"
[2025-10-12 09:33:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:33:46] HOME_URL="https://www.centos.org/"
[2025-10-12 09:33:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:33:46] 
[2025-10-12 09:33:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:33:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:33:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:33:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:33:46] 
[2025-10-12 09:33:46] 2025-10-12 13:32:50,798 | INFO     | ***************************************
[2025-10-12 09:33:46] 2025-10-12 13:32:51,301 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:33:46] 2025-10-12 13:32:51,322 | INFO     | sufficient remaining disk space (18555600896 B)
[2025-10-12 09:33:46] 2025-10-12 13:32:51,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:33:46] 2025-10-12 13:32:51,323 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:33:46] 2025-10-12 13:32:51,323 | INFO     | update_server=False
[2025-10-12 09:33:46] 2025-10-12 13:32:51,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:33:46] 2025-10-12 13:32:51,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:33:46] 2025-10-12 13:32:51,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:33:46] 2025-10-12 13:32:51,324 | INFO     | aborting loop
[2025-10-12 09:33:46] 2025-10-12 13:32:51,476 | INFO     | all data control threads have been joined
[2025-10-12 09:33:46] 2025-10-12 13:32:51,585 | INFO     | all job control threads have been joined
[2025-10-12 09:33:46] 2025-10-12 13:32:52,329 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:52,329 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:52,330 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:52,482 | INFO     | [data] control thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:52,535 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:52,554 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:52,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:33:46] 2025-10-12 13:32:52,568 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:52,591 | INFO     | [job] control thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:52,759 | INFO     | all payload control threads have been joined
[2025-10-12 09:33:46] 2025-10-12 13:32:53,088 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:53,146 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:53,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:53,390 | INFO     | [job] validate thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:53,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:33:46] 2025-10-12 13:32:53,765 | INFO     | [payload] control thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:53,792 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:54,571 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:32:57,600 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:33:46] 2025-10-12 13:33:21,217 | INFO     | PID=29895 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 09:33:46] 2025-10-12 13:33:21,218 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:33:46] 2025-10-12 13:33:21,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:33:46] 2025-10-12 13:33:21,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:33:46] 2025-10-12 13:33:39,686 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:33:46] 2025-10-12 13:33:41,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113230337856)>', '<ExcThread(monitor, started 140112478324480)>']
[2025-10-12 09:33:46] 2025-10-12 13:33:42,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:33:46] 2025-10-12 13:33:42,317 | INFO     | [monitor] control thread has ended
[2025-10-12 09:33:46] 2025-10-12 13:33:46,377 | INFO     | all workflow threads have been joined
[2025-10-12 09:33:46] 2025-10-12 13:33:46,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:33:46] 2025-10-12 13:33:46,378 | INFO     | traces error code: 0
[2025-10-12 09:33:46] 2025-10-12 13:33:46,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:33:46] 2025-10-12 13:33:46,495 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:33:46] 2025-10-12 13:33:46,499 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:33:46] 2025-10-12 13:33:46,504 [wrapper] pilotpid: 29895
[2025-10-12 09:33:46] 2025-10-12 13:33:46,509 [wrapper] Pilot exit status: 0
[2025-10-12 09:33:46] 2025-10-12 13:33:46,527 [wrapper] pandaids: 6839591245
[2025-10-12 09:33:46] 2025-10-12 13:33:46,581 [wrapper] cleanup supervisor_pilot 24407 29896
[2025-10-12 09:33:46] 2025-10-12 13:33:46,586 [wrapper] Test setup, not cleaning
[2025-10-12 09:33:46] 2025-10-12 13:33:46,590 [wrapper] apfmon messages muted
[2025-10-12 09:33:46] 2025-10-12 13:33:46,595 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:33:46] 2025-10-12 13:33:46,599 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:33:46]  *** Error codes and diagnostics ***
[2025-10-12 09:33:46]     "exeErrorCode": 0,
[2025-10-12 09:33:46]     "exeErrorDiag": "",
[2025-10-12 09:33:46]     "pilotErrorCode": 0,
[2025-10-12 09:33:46]     "pilotErrorDiag": "",
[2025-10-12 09:33:46]  *** Listing of results directory ***
[2025-10-12 09:33:46] total 411500
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:14 pilot3.tar.gz
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:33 queuedata.json
[2025-10-12 09:33:46] -rwx------ 1 boincer umatlas     36292 Oct 12 02:33 runpilot2-wrapper.sh
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas       100 Oct 12 07:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:33:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 07:35 run_atlas
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas       105 Oct 12 07:35 job.xml
[2025-10-12 09:33:46] -rw-r--r-- 2 boincer umatlas 220875051 Oct 12 07:35 EVNT.46676267._004510.pool.root.1
[2025-10-12 09:33:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:35 start_atlas.sh
[2025-10-12 09:33:46] drwxrwx--x 2 boincer umatlas      4096 Oct 12 07:35 shared
[2025-10-12 09:33:46] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 07:35 input.tar.gz
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas         0 Oct 12 07:35 boinc_lockfile
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 07:35 pandaJob.out
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas    975520 Oct 12 07:35 agis_schedconf.cvmfs.json
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas   1560580 Oct 12 07:35 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:33:46] drwx------ 5 boincer umatlas      4096 Oct 12 07:35 pilot3
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 09:30 init_data.xml
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas 193905503 Oct 12 09:32 HITS.46676269._072677.pool.root.1
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas       529 Oct 12 09:32 boinc_task_state.xml
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas      1064 Oct 12 09:32 memory_monitor_summary.json
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas    355659 Oct 12 09:32 log.46676269._072677.job.log.tgz.1
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas      7848 Oct 12 09:32 heartbeat.json
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas        95 Oct 12 09:33 pilot_heartbeat.json
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 09:33 boinc_mmap_file
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas        27 Oct 12 09:33 wrapper_checkpoint.txt
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas      4746 Oct 12 09:33 pilotlog.txt
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas    991408 Oct 12 09:33 log.46676269._072677.job.log.1
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas       357 Oct 12 09:33 output.list
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas       620 Oct 12 09:33 runtime_log
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas   1361920 Oct 12 09:33 result.tar.gz
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 09:33 runtime_log.err
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas       659 Oct 12 09:33 MuMNDmDp4R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmuMTMDmA0X1Tn.diag
[2025-10-12 09:33:46] -rw-r--r-- 1 boincer umatlas     21088 Oct 12 09:33 stderr.txt
[2025-10-12 09:33:46] HITS file was successfully produced:
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas 193905503 Oct 12 09:32 shared/HITS.pool.root.1
[2025-10-12 09:33:46]  *** Contents of shared directory: ***
[2025-10-12 09:33:46] total 406976
[2025-10-12 09:33:46] -rw-r--r-- 2 boincer umatlas 220875051 Oct 12 07:35 ATLAS.root_0
[2025-10-12 09:33:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:35 start_atlas.sh
[2025-10-12 09:33:46] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 07:35 input.tar.gz
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas 193905503 Oct 12 09:32 HITS.pool.root.1
[2025-10-12 09:33:46] -rw------- 1 boincer umatlas   1361920 Oct 12 09:33 result.tar.gz
09:33:48 (25963): run_atlas exited; CPU time 51926.994694
09:33:48 (25963): called boinc_finish(0)

</stderr_txt>
]]>

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