Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:15:25 (2706168): wrapper (7.7.26015): starting
04:15:25 (2706168): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 04:15:25] Arguments: --nthreads 3
[2025-10-13 04:15:25] Threads: 3
[2025-10-13 04:15:25] Checking for CVMFS
[2025-10-13 04:15:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:15:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:15:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:15:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:15:26] 2.9.2.0 1182477 5254 82372 151644 2 57 3826781 36864001 0 130560 0 4013151 99.991 181204 854 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 04:15:26] CVMFS is ok
[2025-10-13 04:15:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:15:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:15:26] Further information can be found at the LHC@home message board.
[2025-10-13 04:15:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:15:26] Checking for apptainer binary...
[2025-10-13 04:15:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:15:26] Running /usr/bin/apptainer --version
[2025-10-13 04:15:26] apptainer version 1.4.1-1.1
[2025-10-13 04:15:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:15:26] thA332
[2025-10-13 04:15:26] apptainer works
[2025-10-13 04:15:26] Set ATHENA_PROC_NUMBER=3
[2025-10-13 04:15:26] Set ATHENA_CORE_NUMBER=3
[2025-10-13 04:15:26] Starting ATLAS job with PandaID=6839821879
[2025-10-13 04:15:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:43:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:43:02] 2025-10-13 03:42:31,504 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:43:02] 2025-10-13 03:42:31,512 | INFO     | cat /etc/os-release:
[2025-10-13 05:43:02] NAME="CentOS Linux"
[2025-10-13 05:43:02] VERSION="7 (Core)"
[2025-10-13 05:43:02] ID="centos"
[2025-10-13 05:43:02] ID_LIKE="rhel fedora"
[2025-10-13 05:43:02] VERSION_ID="7"
[2025-10-13 05:43:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:43:02] ANSI_COLOR="0;31"
[2025-10-13 05:43:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:43:02] HOME_URL="https://www.centos.org/"
[2025-10-13 05:43:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:43:02] 
[2025-10-13 05:43:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:43:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:43:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:43:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:43:02] 
[2025-10-13 05:43:02] 2025-10-13 03:42:31,513 | INFO     | ***************************************
[2025-10-13 05:43:02] 2025-10-13 03:42:32,016 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 05:43:02] 2025-10-13 03:42:32,028 | INFO     | sufficient remaining disk space (255658557440 B)
[2025-10-13 05:43:02] 2025-10-13 03:42:32,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:43:02] 2025-10-13 03:42:32,028 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:43:02] 2025-10-13 03:42:32,028 | INFO     | update_server=False
[2025-10-13 05:43:02] 2025-10-13 03:42:32,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:43:02] 2025-10-13 03:42:32,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:43:02] 2025-10-13 03:42:32,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:43:02] 2025-10-13 03:42:32,029 | INFO     | aborting loop
[2025-10-13 05:43:02] 2025-10-13 03:42:32,463 | INFO     | all job control threads have been joined
[2025-10-13 05:43:02] 2025-10-13 03:42:32,965 | INFO     | all data control threads have been joined
[2025-10-13 05:43:02] 2025-10-13 03:42:33,034 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:33,034 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:33,074 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:33,097 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:33,097 | INFO     | all payload control threads have been joined
[2025-10-13 05:43:02] 2025-10-13 03:42:33,349 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:33,469 | INFO     | [job] control thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:33,662 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:33,920 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:33,971 | INFO     | [data] control thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:34,020 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:34,033 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:34,103 | INFO     | [payload] control thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:34,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:43:02] 2025-10-13 03:42:34,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:34,430 | INFO     | [job] validate thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:34,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:43:02] 2025-10-13 03:42:35,922 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:37,106 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:43:02] 2025-10-13 03:42:38,310 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:43:02] 2025-10-13 03:42:38,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140142038361920)>', '<ExcThread(monitor, started 140141553248000)>']
[2025-10-13 05:43:02] 2025-10-13 03:42:43,724 | INFO     | all workflow threads have been joined
[2025-10-13 05:43:02] 2025-10-13 03:42:43,725 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:43:02] 2025-10-13 03:42:43,725 | INFO     | traces error code: 0
[2025-10-13 05:43:02] 2025-10-13 03:42:43,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:43:02] 2025-10-13 03:43:02,594 | INFO     | PID=2709885 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:43:02] 2025-10-13 03:43:02,595 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:43:02] 2025-10-13 03:43:02,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:43:02] 2025-10-13 03:43:02,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:43:02] 2025-10-13 03:43:02,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:43:02] 2025-10-13 03:43:02,595 | INFO     | [monitor] control thread has ended
[2025-10-13 05:43:02] 2025-10-13 03:43:02,645 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:43:02] 2025-10-13 03:43:02,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:43:02] 2025-10-13 03:43:02,650 [wrapper] pilotpid: 2709885
[2025-10-13 05:43:02] 2025-10-13 03:43:02,652 [wrapper] Pilot exit status: 0
[2025-10-13 05:43:02] 2025-10-13 03:43:02,659 [wrapper] pandaids: 6839821879
[2025-10-13 05:43:02] 2025-10-13 03:43:02,675 [wrapper] cleanup supervisor_pilot 2728370 2709886
[2025-10-13 05:43:02] 2025-10-13 03:43:02,678 [wrapper] Test setup, not cleaning
[2025-10-13 05:43:02] 2025-10-13 03:43:02,680 [wrapper] apfmon messages muted
[2025-10-13 05:43:02] 2025-10-13 03:43:02,682 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:43:02] 2025-10-13 03:43:02,684 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:43:02]  *** Error codes and diagnostics ***
[2025-10-13 05:43:02]     "exeErrorCode": 0,
[2025-10-13 05:43:02]     "exeErrorDiag": "",
[2025-10-13 05:43:02]     "pilotErrorCode": 0,
[2025-10-13 05:43:02]     "pilotErrorDiag": "",
[2025-10-13 05:43:02]  *** Listing of results directory ***
[2025-10-13 05:43:02] total 415596
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:04 pilot3.tar.gz
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc      5112 Oct 12 11:18 queuedata.json
[2025-10-13 05:43:02] -rwx------ 1 boinc boinc     36292 Oct 12 11:18 runpilot2-wrapper.sh
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc       100 Oct 13 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:43:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 04:15 run_atlas
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc       105 Oct 13 04:15 job.xml
[2025-10-13 05:43:02] -rw-r--r-- 2 boinc boinc 220300032 Oct 13 04:15 EVNT.46676267._003568.pool.root.1
[2025-10-13 05:43:02] -rw-r--r-- 2 boinc boinc    569686 Oct 13 04:15 input.tar.gz
[2025-10-13 05:43:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:15 start_atlas.sh
[2025-10-13 05:43:02] drwxrwx--x 2 boinc boinc      4096 Oct 13 04:15 shared
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:15 boinc_setup_complete
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc      6437 Oct 13 04:15 init_data.xml
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:15 boinc_lockfile
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc      2550 Oct 13 04:15 pandaJob.out
[2025-10-13 05:43:02] -rw------- 1 boinc boinc    975595 Oct 13 04:15 agis_schedconf.cvmfs.json
[2025-10-13 05:43:02] -rw------- 1 boinc boinc   1560580 Oct 13 04:15 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:43:02] drwx------ 5 boinc boinc      4096 Oct 13 04:15 pilot3
[2025-10-13 05:43:02] -rw------- 1 boinc boinc 199329811 Oct 13 05:42 HITS.46676269._075200.pool.root.1
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc       529 Oct 13 05:42 boinc_task_state.xml
[2025-10-13 05:43:02] -rw------- 1 boinc boinc      1021 Oct 13 05:42 memory_monitor_summary.json
[2025-10-13 05:43:02] -rw------- 1 boinc boinc    263040 Oct 13 05:42 log.46676269._075200.job.log.tgz.1
[2025-10-13 05:43:02] -rw------- 1 boinc boinc      7763 Oct 13 05:42 heartbeat.json
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc        27 Oct 13 05:42 wrapper_checkpoint.txt
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:42 boinc_mmap_file
[2025-10-13 05:43:02] -rw------- 1 boinc boinc       747 Oct 13 05:43 pilotlog.txt
[2025-10-13 05:43:02] -rw------- 1 boinc boinc        95 Oct 13 05:43 pilot_heartbeat.json
[2025-10-13 05:43:02] -rw------- 1 boinc boinc    763640 Oct 13 05:43 log.46676269._075200.job.log.1
[2025-10-13 05:43:02] -rw------- 1 boinc boinc       357 Oct 13 05:43 output.list
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:43 runtime_log
[2025-10-13 05:43:02] -rw------- 1 boinc boinc   1044480 Oct 13 05:43 result.tar.gz
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc      8777 Oct 13 05:43 runtime_log.err
[2025-10-13 05:43:02] -rw------- 1 boinc boinc       659 Oct 13 05:43 KO5KDmAP7R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLZTMDmMBt5kn.diag
[2025-10-13 05:43:02] -rw-r--r-- 1 boinc boinc      8883 Oct 13 05:43 stderr.txt
[2025-10-13 05:43:02] HITS file was successfully produced:
[2025-10-13 05:43:02] -rw------- 1 boinc boinc 199329811 Oct 13 05:42 shared/HITS.pool.root.1
[2025-10-13 05:43:02]  *** Contents of shared directory: ***
[2025-10-13 05:43:02] total 411400
[2025-10-13 05:43:02] -rw-r--r-- 2 boinc boinc 220300032 Oct 13 04:15 ATLAS.root_0
[2025-10-13 05:43:02] -rw-r--r-- 2 boinc boinc    569686 Oct 13 04:15 input.tar.gz
[2025-10-13 05:43:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:15 start_atlas.sh
[2025-10-13 05:43:02] -rw------- 1 boinc boinc 199329811 Oct 13 05:42 HITS.pool.root.1
[2025-10-13 05:43:02] -rw------- 1 boinc boinc   1044480 Oct 13 05:43 result.tar.gz
05:43:04 (2706168): run_atlas exited; CPU time 14946.290496
05:43:04 (2706168): called boinc_finish(0)

</stderr_txt>
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