Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:58:38 (1716618): wrapper (7.7.26015): starting
03:58:38 (1716618): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 03:58:38] Arguments: --nthreads 3
[2025-10-13 03:58:38] Threads: 3
[2025-10-13 03:58:38] Checking for CVMFS
[2025-10-13 03:58:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:58:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:58:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:58:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:58:38] 2.9.2.0 469795 2282 82404 151643 2 57 4225452 36864001 0 130560 0 1778476 99.991 78719 499 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 03:58:38] CVMFS is ok
[2025-10-13 03:58:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:58:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:58:38] Further information can be found at the LHC@home message board.
[2025-10-13 03:58:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:58:38] Checking for apptainer binary...
[2025-10-13 03:58:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:58:38] Running /usr/bin/apptainer --version
[2025-10-13 03:58:38] apptainer version 1.4.1-1.1
[2025-10-13 03:58:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:58:38] atlasA141
[2025-10-13 03:58:38] apptainer works
[2025-10-13 03:58:38] Set ATHENA_PROC_NUMBER=3
[2025-10-13 03:58:38] Set ATHENA_CORE_NUMBER=3
[2025-10-13 03:58:38] Starting ATLAS job with PandaID=6839385209
[2025-10-13 03:58:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:23:55]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:23:55]  protocol_id=None
[2025-10-13 05:23:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 05:23:55]  replicas=None
[2025-10-13 05:23:55]  scope=mc23_13p6TeV
[2025-10-13 05:23:55]  status=None
[2025-10-13 05:23:55]  status_code=0
[2025-10-13 05:23:55]  storage_token=
[2025-10-13 05:23:55]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6839385209/log.46676269._070453.job.log.tgz.1
[2025-10-13 05:23:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/f4/log.46676269._070453.job.log.tgz.1
[2025-10-13 05:23:55]  workdir=None
[2025-10-13 05:23:55] ]
[2025-10-13 05:23:55] 2025-10-13 03:22:43,950 | INFO     | transferring file log.46676269._070453.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6839385209/log.46676269._070453.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 05:23:55] 2025-10-13 03:22:43,950 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6839385209/log.46676269._070453.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0704
[2025-10-13 05:23:55] 2025-10-13 03:22:43,964 | INFO     | adding to output.list: log.46676269._070453.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/f4/log.46676269._070453.job.log.tg
[2025-10-13 05:23:55] 2025-10-13 03:22:43,965 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 05:23:55] 2025-10-13 03:22:43,965 | INFO     | summary of transferred files:
[2025-10-13 05:23:55] 2025-10-13 03:22:43,965 | INFO     |  -- lfn=log.46676269._070453.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 05:23:55] 2025-10-13 03:22:43,965 | INFO     | stage-out finished correctly
[2025-10-13 05:23:55] 2025-10-13 03:22:45,210 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 05:23:55] 2025-10-13 03:22:45,331 | INFO     | job 6839385209 has state=finished
[2025-10-13 05:23:55] 2025-10-13 03:22:45,331 | INFO     | preparing for final server update for job 6839385209 in state='finished'
[2025-10-13 05:23:55] 2025-10-13 03:22:45,332 | INFO     | this job has now completed (state=finished)
[2025-10-13 05:23:55] 2025-10-13 03:22:45,332 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 05:23:55] 2025-10-13 03:22:45,332 | INFO     | log transfer has been attempted: DONE
[2025-10-13 05:23:55] 2025-10-13 03:22:45,332 | INFO     | job 6839385209 has finished - writing final server update
[2025-10-13 05:23:55] 2025-10-13 03:22:45,332 | INFO     | total number of processed events: 400 (read)
[2025-10-13 05:23:55] 2025-10-13 03:22:45,333 | INFO     | executing command: lscpu
[2025-10-13 05:23:55] 2025-10-13 03:22:45,350 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 05:23:55] 2025-10-13 03:22:45,755 | INFO     | time since job start (5041s) is within the limit (172800.0s)
[2025-10-13 05:23:55] 2025-10-13 03:22:45,810 | INFO     | monitor loop #388: job 0:6839385209 is in state 'finished'
[2025-10-13 05:23:55] 2025-10-13 03:22:45,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:23:55] 2025-10-13 03:22:47,760 | INFO     | time since job start (5043s) is within the limit (172800.0s)
[2025-10-13 05:23:55] 2025-10-13 03:22:48,313 | INFO     | monitor loop #389: job 0:6839385209 is in state 'finished'
[2025-10-13 05:23:55] 2025-10-13 03:22:48,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:23:55] 2025-10-13 03:22:48,834 | INFO     | PID=1720353 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:23:55] 2025-10-13 03:22:49,834 | INFO     | time since job start (5045s) is within the limit (172800.0s)
[2025-10-13 05:23:55] 2025-10-13 03:22:50,536 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:23:55] 2025-10-13 03:22:50,537 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3544.0546666666673
[2025-10-13 05:23:55] 2025-10-13 03:22:50,538 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839385209/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:23:55] 2025-10-13 03:22:50,538 | INFO     | extracted standard info from prmon json
[2025-10-13 05:23:55] 2025-10-13 03:22:50,538 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:23:55] 2025-10-13 03:22:50,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:23:55] 2025-10-13 03:22:50,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:23:55] 2025-10-13 03:22:50,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | sum of square deviations: 136095575.0
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | sum of deviations: -2824695981.499999
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | mean x: 1760323336.5
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | mean y: 2378231.6447368423
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | -- intersect: 36538307153.30307
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | intersect: 36538307153.30307
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | chi2: 0.10025076638810208
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | -- intersect: 36538307153.30307
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | current memory leak: -20.76 B/s (using 76 data points, chi2=0.10)
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | could have reported an average CPU frequency of 3905 MHz (6 samples)
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | ..............................
[2025-10-13 05:23:55] 2025-10-13 03:22:50,539 | INFO     | . Timing measurements:
[2025-10-13 05:23:55] 2025-10-13 03:22:50,540 | INFO     | . get job = 0 s
[2025-10-13 05:23:55] 2025-10-13 03:22:50,540 | INFO     | . initial setup = 1 s
[2025-10-13 05:23:55] 2025-10-13 03:22:50,540 | INFO     | . payload setup = 2 s
[2025-10-13 05:23:55] 2025-10-13 03:22:50,540 | INFO     | . stage-in = 0 s
[2025-10-13 05:23:55] 2025-10-13 03:22:50,540 | INFO     | . payload execution = 5019 s
[2025-10-13 05:23:55] 2025-10-13 03:22:50,540 | INFO     | . stage-out = 0 s
[2025-10-13 05:23:55] 2025-10-13 03:22:50,540 | INFO     | . log creation = 0 s
[2025-10-13 05:23:55] 2025-10-13 03:22:50,540 | INFO     | ..............................
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | 
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | job summary report
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | --------------------------------------------------
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | PanDA job id: 6839385209
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | task id: 46676269
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | errors: (none)
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | pilot state: finished 
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | transexitcode: 0
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | exeerrorcode: 0
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | exeerrordiag: 
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | exitcode: 0
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | exitmsg: OK
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | cpuconsumptiontime: 14371 s
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | nevents: 400
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | neventsw: 0
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | pid: 1726852
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | pgrp: 1726852
[2025-10-13 05:23:55] 2025-10-13 03:22:50,570 | INFO     | corecount: 3
[2025-10-13 05:23:55] 2025-10-13 03:22:50,571 | INFO     | event service: False
[2025-10-13 05:23:55] 2025-10-13 03:22:50,571 | INFO     | sizes: {0: 2348858, 3: 2349120, 11: 2349148, 5026: 2384594, 5028: 2384594, 5033: 2384788}
[2025-10-13 05:23:55] 2025-10-13 03:22:50,571 | INFO     | --------------------------------------------------
[2025-10-13 05:23:55] 2025-10-13 03:22:50,571 | INFO     | 
[2025-10-13 05:23:55] 2025-10-13 03:22:50,571 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 05:23:55] 2025-10-13 03:22:50,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,583 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,583 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | job 6839385209 has completed (purged errors)
[2025-10-13 05:23:55] 2025-10-13 03:22:50,584 | INFO     | overall cleanup function is called
[2025-10-13 05:23:55] 2025-10-13 03:22:51,590 | INFO     | --- collectZombieJob: --- 10, [1726852]
[2025-10-13 05:23:55] 2025-10-13 03:22:51,591 | INFO     | zombie collector waiting for pid 1726852
[2025-10-13 05:23:55] 2025-10-13 03:22:51,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:23:55] 2025-10-13 03:22:51,591 | INFO     | collected zombie processes
[2025-10-13 05:23:55] 2025-10-13 03:22:51,591 | INFO     | will attempt to kill all subprocesses of pid=1726852
[2025-10-13 05:23:55] 2025-10-13 03:22:51,647 | INFO     | process IDs to be killed: [1726852] (in reverse order)
[2025-10-13 05:23:55] 2025-10-13 03:22:51,675 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:23:55] 2025-10-13 03:22:51,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:23:55] 2025-10-13 03:22:51,677 | INFO     | did not find any defunct processes belonging to 1726852
[2025-10-13 05:23:55] 2025-10-13 03:22:51,679 | INFO     | did not find any defunct processes belonging to 1726852
[2025-10-13 05:23:55] 2025-10-13 03:22:51,679 | INFO     | ready for new job
[2025-10-13 05:23:55] 2025-10-13 03:22:51,679 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:23:55] 2025-10-13 03:22:51,679 | INFO     | ***************************************
[2025-10-13 05:23:55] 2025-10-13 03:22:51,679 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:23:55] 2025-10-13 03:22:51,680 | INFO     | ***************************************
[2025-10-13 05:23:55] 2025-10-13 03:22:51,680 | INFO     | 
[2025-10-13 05:23:55] 2025-10-13 03:22:51,680 | INFO     | architecture information:
[2025-10-13 05:23:55] 2025-10-13 03:22:51,680 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:23:55] 2025-10-13 03:22:51,690 | INFO     | cat /etc/os-release:
[2025-10-13 05:23:55] NAME="CentOS Linux"
[2025-10-13 05:23:55] VERSION="7 (Core)"
[2025-10-13 05:23:55] ID="centos"
[2025-10-13 05:23:55] ID_LIKE="rhel fedora"
[2025-10-13 05:23:55] VERSION_ID="7"
[2025-10-13 05:23:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:23:55] ANSI_COLOR="0;31"
[2025-10-13 05:23:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:23:55] HOME_URL="https://www.centos.org/"
[2025-10-13 05:23:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:23:55] 
[2025-10-13 05:23:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:23:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:23:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:23:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:23:55] 
[2025-10-13 05:23:55] 2025-10-13 03:22:51,690 | INFO     | ***************************************
[2025-10-13 05:23:55] 2025-10-13 03:22:52,193 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 05:23:55] 2025-10-13 03:22:52,206 | INFO     | sufficient remaining disk space (355562684416 B)
[2025-10-13 05:23:55] 2025-10-13 03:22:52,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:23:55] 2025-10-13 03:22:52,207 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:23:55] 2025-10-13 03:22:52,207 | INFO     | update_server=False
[2025-10-13 05:23:55] 2025-10-13 03:22:52,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:23:55] 2025-10-13 03:22:52,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:23:55] 2025-10-13 03:22:52,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:23:55] 2025-10-13 03:22:52,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:23:55] 2025-10-13 03:22:52,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:23:55] 2025-10-13 03:22:52,207 | INFO     | aborting loop
[2025-10-13 05:23:55] 2025-10-13 03:22:52,435 | INFO     | all job control threads have been joined
[2025-10-13 05:23:55] 2025-10-13 03:22:52,472 | INFO     | all payload control threads have been joined
[2025-10-13 05:23:55] 2025-10-13 03:22:52,689 | INFO     | all data control threads have been joined
[2025-10-13 05:23:55] 2025-10-13 03:22:53,212 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:53,213 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:53,213 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:53,441 | INFO     | [job] control thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:53,477 | INFO     | [payload] control thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:53,674 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:53,694 | INFO     | [data] control thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:53,996 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:54,213 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:54,306 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:54,478 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:54,478 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:54,480 | INFO     | [job] validate thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:54,658 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:22:56,213 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:23:02,739 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:23:55] 2025-10-13 03:23:03,745 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:23:55] 2025-10-13 03:23:22,936 | INFO     | PID=1720353 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:23:55] 2025-10-13 03:23:22,937 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:23:55] 2025-10-13 03:23:22,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:23:55] 2025-10-13 03:23:22,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:23:55] 2025-10-13 03:23:50,583 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:23:55] 2025-10-13 03:23:50,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140426027284288)>', '<ExcThread(monitor, started 140425524389632)>']
[2025-10-13 05:23:55] 2025-10-13 03:23:51,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:23:55] 2025-10-13 03:23:51,076 | INFO     | [monitor] control thread has ended
[2025-10-13 05:23:55] 2025-10-13 03:23:55,747 | INFO     | all workflow threads have been joined
[2025-10-13 05:23:55] 2025-10-13 03:23:55,747 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:23:55] 2025-10-13 03:23:55,747 | INFO     | traces error code: 0
[2025-10-13 05:23:55] 2025-10-13 03:23:55,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:23:55] 2025-10-13 03:23:55,805 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:23:55] 2025-10-13 03:23:55,807 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:23:55] 2025-10-13 03:23:55,810 [wrapper] pilotpid: 1720353
[2025-10-13 05:23:55] 2025-10-13 03:23:55,812 [wrapper] Pilot exit status: 0
[2025-10-13 05:23:55] 2025-10-13 03:23:55,820 [wrapper] pandaids: 6839385209
[2025-10-13 05:23:55] 2025-10-13 03:23:55,841 [wrapper] cleanup supervisor_pilot 1758024 1720354
[2025-10-13 05:23:55] 2025-10-13 03:23:55,844 [wrapper] Test setup, not cleaning
[2025-10-13 05:23:55] 2025-10-13 03:23:55,846 [wrapper] apfmon messages muted
[2025-10-13 05:23:55] 2025-10-13 03:23:55,849 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:23:55] 2025-10-13 03:23:55,851 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:23:55]  *** Error codes and diagnostics ***
[2025-10-13 05:23:55]     "exeErrorCode": 0,
[2025-10-13 05:23:55]     "exeErrorDiag": "",
[2025-10-13 05:23:55]     "pilotErrorCode": 0,
[2025-10-13 05:23:55]     "pilotErrorDiag": "",
[2025-10-13 05:23:55]  *** Listing of results directory ***
[2025-10-13 05:23:55] total 414360
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:03 queuedata.json
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:04 pilot3.tar.gz
[2025-10-13 05:23:55] -rwx------ 1 boinc boinc     36292 Oct 12 06:04 runpilot2-wrapper.sh
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:23:55] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:58 run_atlas
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:58 job.xml
[2025-10-13 05:23:55] -rw-r--r-- 2 boinc boinc 224495475 Oct 13 03:58 EVNT.46676267._003231.pool.root.1
[2025-10-13 05:23:55] -rw-r--r-- 2 boinc boinc    569678 Oct 13 03:58 input.tar.gz
[2025-10-13 05:23:55] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:58 start_atlas.sh
[2025-10-13 05:23:55] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:58 shared
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:58 boinc_setup_complete
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc      6441 Oct 13 03:58 init_data.xml
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:58 boinc_lockfile
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc      2549 Oct 13 03:58 pandaJob.out
[2025-10-13 05:23:55] -rw------- 1 boinc boinc    975595 Oct 13 03:58 agis_schedconf.cvmfs.json
[2025-10-13 05:23:55] -rw------- 1 boinc boinc   1560580 Oct 13 03:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:23:55] drwx------ 5 boinc boinc      4096 Oct 13 03:58 pilot3
[2025-10-13 05:23:55] -rw------- 1 boinc boinc 193941451 Oct 13 05:22 HITS.46676269._070453.pool.root.1
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc       529 Oct 13 05:22 boinc_task_state.xml
[2025-10-13 05:23:55] -rw------- 1 boinc boinc      1022 Oct 13 05:22 memory_monitor_summary.json
[2025-10-13 05:23:55] -rw------- 1 boinc boinc    241764 Oct 13 05:22 log.46676269._070453.job.log.tgz.1
[2025-10-13 05:23:55] -rw------- 1 boinc boinc      7765 Oct 13 05:22 heartbeat.json
[2025-10-13 05:23:55] -rw------- 1 boinc boinc        95 Oct 13 05:23 pilot_heartbeat.json
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:23 boinc_mmap_file
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc        27 Oct 13 05:23 wrapper_checkpoint.txt
[2025-10-13 05:23:55] -rw------- 1 boinc boinc      4824 Oct 13 05:23 pilotlog.txt
[2025-10-13 05:23:55] -rw------- 1 boinc boinc    738680 Oct 13 05:23 log.46676269._070453.job.log.1
[2025-10-13 05:23:55] -rw------- 1 boinc boinc       357 Oct 13 05:23 output.list
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:23 runtime_log
[2025-10-13 05:23:55] -rw------- 1 boinc boinc   1003520 Oct 13 05:23 result.tar.gz
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc      8792 Oct 13 05:23 runtime_log.err
[2025-10-13 05:23:55] -rw------- 1 boinc boinc       661 Oct 13 05:23 JG2KDmMV2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqViNDmK3XaQn.diag
[2025-10-13 05:23:55] -rw-r--r-- 1 boinc boinc     21850 Oct 13 05:23 stderr.txt
[2025-10-13 05:23:55] HITS file was successfully produced:
[2025-10-13 05:23:55] -rw------- 1 boinc boinc 193941451 Oct 13 05:22 shared/HITS.pool.root.1
[2025-10-13 05:23:55]  *** Contents of shared directory: ***
[2025-10-13 05:23:55] total 410192
[2025-10-13 05:23:55] -rw-r--r-- 2 boinc boinc 224495475 Oct 13 03:58 ATLAS.root_0
[2025-10-13 05:23:55] -rw-r--r-- 2 boinc boinc    569678 Oct 13 03:58 input.tar.gz
[2025-10-13 05:23:55] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:58 start_atlas.sh
[2025-10-13 05:23:55] -rw------- 1 boinc boinc 193941451 Oct 13 05:22 HITS.pool.root.1
[2025-10-13 05:23:55] -rw------- 1 boinc boinc   1003520 Oct 13 05:23 result.tar.gz
05:23:57 (1716618): run_atlas exited; CPU time 14394.181893
05:23:57 (1716618): called boinc_finish(0)

</stderr_txt>
]]>

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