Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:27:40 (28621): wrapper (7.7.26015): starting
07:27:40 (28621): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:27:40] Arguments: --nthreads 8
[2025-10-12 07:27:40] Threads: 8
[2025-10-12 07:27:40] Checking for CVMFS
[2025-10-12 07:27:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:27:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:27:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:27:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:27:40] 2.11.2.0 3101 203572 83128 151619 3 56 15027498 20275201 1 130560 1 74055699 99.978 10415627 10335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:27:40] CVMFS is ok
[2025-10-12 07:27:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:27:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:27:40] Further information can be found at the LHC@home message board.
[2025-10-12 07:27:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:27:40] Checking for apptainer binary...
[2025-10-12 07:27:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:27:40] Running /usr/bin/apptainer --version
[2025-10-12 07:27:40] apptainer version 1.3.2-1.el7
[2025-10-12 07:27:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:27:42] c-204-15.aglt2.org
[2025-10-12 07:27:42] apptainer works
[2025-10-12 07:27:42] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:27:42] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:27:42] Starting ATLAS job with PandaID=6839319469
[2025-10-12 07:27:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:39:19]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:39:19] 2025-10-12 13:38:54,618 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:39:19] 2025-10-12 13:38:54,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:39:19] 2025-10-12 13:38:54,623 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:39:19] 2025-10-12 13:38:54,623 | INFO     | sum of square deviations: 665612480.0
[2025-10-12 09:39:19] 2025-10-12 13:38:54,624 | INFO     | sum of deviations: -16163256376.000002
[2025-10-12 09:39:19] 2025-10-12 13:38:54,624 | INFO     | mean x: 1760272415.0
[2025-10-12 09:39:19] 2025-10-12 13:38:54,624 | INFO     | mean y: 2531827.80620155
[2025-10-12 09:39:19] 2025-10-12 13:38:54,624 | INFO     | -- intersect: 42747725450.44631
[2025-10-12 09:39:19] 2025-10-12 13:38:54,625 | INFO     | intersect: 42747725450.44631
[2025-10-12 09:39:19] 2025-10-12 13:38:54,625 | INFO     | chi2: 2.618551993073263
[2025-10-12 09:39:19] 2025-10-12 13:38:54,625 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 09:39:19] 2025-10-12 13:38:54,626 | INFO     | sum of deviations: -5527207834.5
[2025-10-12 09:39:19] 2025-10-12 13:38:54,626 | INFO     | mean x: 1760272262.5
[2025-10-12 09:39:19] 2025-10-12 13:38:54,626 | INFO     | mean y: 2553001.185483871
[2025-10-12 09:39:19] 2025-10-12 13:38:54,626 | INFO     | -- intersect: 16460300969.400488
[2025-10-12 09:39:19] 2025-10-12 13:38:54,626 | INFO     | intersect: 16460300969.400488
[2025-10-12 09:39:19] 2025-10-12 13:38:54,627 | INFO     | chi2: 1.6327745356481056
[2025-10-12 09:39:19] 2025-10-12 13:38:54,627 | INFO     | current chi2=1.6327745356481056 (change=37.645899719875324 %)
[2025-10-12 09:39:19] 2025-10-12 13:38:54,627 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 09:39:19] 2025-10-12 13:38:54,628 | INFO     | sum of deviations: -4682778521.000011
[2025-10-12 09:39:19] 2025-10-12 13:38:54,628 | INFO     | mean x: 1760272110.0
[2025-10-12 09:39:19] 2025-10-12 13:38:54,628 | INFO     | mean y: 2554877.487394958
[2025-10-12 09:39:19] 2025-10-12 13:38:54,628 | INFO     | -- intersect: 15778478207.094246
[2025-10-12 09:39:19] 2025-10-12 13:38:54,629 | INFO     | intersect: 15778478207.094246
[2025-10-12 09:39:19] 2025-10-12 13:38:54,629 | INFO     | chi2: 1.6337238037315358
[2025-10-12 09:39:19] 2025-10-12 13:38:54,629 | INFO     | current chi2=1.6337238037315358 (change=-0.058138344437948526 %)
[2025-10-12 09:39:19] 2025-10-12 13:38:54,629 | INFO     | right removable region: 118
[2025-10-12 09:39:19] 2025-10-12 13:38:54,630 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 09:39:19] 2025-10-12 13:38:54,630 | INFO     | sum of deviations: -35496113500.0
[2025-10-12 09:39:19] 2025-10-12 13:38:54,631 | INFO     | mean x: 1760272567.5
[2025-10-12 09:39:19] 2025-10-12 13:38:54,631 | INFO     | mean y: 2570726.7419354836
[2025-10-12 09:39:19] 2025-10-12 13:38:54,631 | INFO     | -- intersect: 105695392228.5656
[2025-10-12 09:39:19] 2025-10-12 13:38:54,631 | INFO     | intersect: 105695392228.5656
[2025-10-12 09:39:19] 2025-10-12 13:38:54,631 | INFO     | chi2: 1.163958430892484
[2025-10-12 09:39:19] 2025-10-12 13:38:54,632 | INFO     | current chi2=1.163958430892484 (change=55.54953905931788 %)
[2025-10-12 09:39:19] 2025-10-12 13:38:54,632 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 09:39:19] 2025-10-12 13:38:54,633 | INFO     | sum of deviations: -33982848070.0
[2025-10-12 09:39:19] 2025-10-12 13:38:54,633 | INFO     | mean x: 1760272720.0
[2025-10-12 09:39:19] 2025-10-12 13:38:54,633 | INFO     | mean y: 2567273.7983193276
[2025-10-12 09:39:19] 2025-10-12 13:38:54,633 | INFO     | -- intersect: 114488227667.98654
[2025-10-12 09:39:19] 2025-10-12 13:38:54,633 | INFO     | intersect: 114488227667.98654
[2025-10-12 09:39:19] 2025-10-12 13:38:54,634 | INFO     | chi2: 1.1504268597342562
[2025-10-12 09:39:19] 2025-10-12 13:38:54,634 | INFO     | current chi2=1.1504268597342562 (change=1.162547630489882 %)
[2025-10-12 09:39:19] 2025-10-12 13:38:54,634 | INFO     | left removable region: 20
[2025-10-12 09:39:19] 2025-10-12 13:38:54,634 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 09:39:19] 2025-10-12 13:38:54,635 | INFO     | sum of deviations: -16339209473.0
[2025-10-12 09:39:19] 2025-10-12 13:38:54,635 | INFO     | mean x: 1760272689.5
[2025-10-12 09:39:19] 2025-10-12 13:38:54,635 | INFO     | mean y: 2579655.5306122447
[2025-10-12 09:39:19] 2025-10-12 13:38:54,635 | INFO     | -- intersect: 98562322804.0332
[2025-10-12 09:39:19] 2025-10-12 13:38:54,636 | INFO     | intersect: 98562322804.0332
[2025-10-12 09:39:19] 2025-10-12 13:38:54,636 | INFO     | chi2: 0.09827126359439221
[2025-10-12 09:39:19] 2025-10-12 13:38:54,636 | INFO     | -- intersect: 98562322804.0332
[2025-10-12 09:39:19] 2025-10-12 13:38:54,636 | INFO     | current memory leak: -55.99 B/s (using 98 data points, chi2=0.10)
[2025-10-12 09:39:19] 2025-10-12 13:38:54,637 | INFO     | could have reported an average CPU frequency of 1995 MHz (8 samples)
[2025-10-12 09:39:19] 2025-10-12 13:38:54,637 | INFO     | ..............................
[2025-10-12 09:39:19] 2025-10-12 13:38:54,637 | INFO     | . Timing measurements:
[2025-10-12 09:39:19] 2025-10-12 13:38:54,637 | INFO     | . get job = 0 s
[2025-10-12 09:39:19] 2025-10-12 13:38:54,638 | INFO     | . initial setup = 2 s
[2025-10-12 09:39:19] 2025-10-12 13:38:54,638 | INFO     | . payload setup = 8 s
[2025-10-12 09:39:19] 2025-10-12 13:38:54,638 | INFO     | . stage-in = 0 s
[2025-10-12 09:39:19] 2025-10-12 13:38:54,638 | INFO     | . payload execution = 7814 s
[2025-10-12 09:39:19] 2025-10-12 13:38:54,638 | INFO     | . stage-out = 0 s
[2025-10-12 09:39:19] 2025-10-12 13:38:54,638 | INFO     | . log creation = 0 s
[2025-10-12 09:39:19] 2025-10-12 13:38:54,638 | INFO     | ..............................
[2025-10-12 09:39:19] 2025-10-12 13:38:55,139 | INFO     | time since job start (7855s) is within the limit (172800.0s)
[2025-10-12 09:39:19] 2025-10-12 13:38:55,205 | INFO     | 
[2025-10-12 09:39:19] 2025-10-12 13:38:55,205 | INFO     | job summary report
[2025-10-12 09:39:19] 2025-10-12 13:38:55,205 | INFO     | --------------------------------------------------
[2025-10-12 09:39:19] 2025-10-12 13:38:55,206 | INFO     | PanDA job id: 6839319469
[2025-10-12 09:39:19] 2025-10-12 13:38:55,206 | INFO     | task id: 46676269
[2025-10-12 09:39:19] 2025-10-12 13:38:55,206 | INFO     | errors: (none)
[2025-10-12 09:39:19] 2025-10-12 13:38:55,206 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:39:19] 2025-10-12 13:38:55,206 | INFO     | pilot state: finished 
[2025-10-12 09:39:19] 2025-10-12 13:38:55,207 | INFO     | transexitcode: 0
[2025-10-12 09:39:19] 2025-10-12 13:38:55,207 | INFO     | exeerrorcode: 0
[2025-10-12 09:39:19] 2025-10-12 13:38:55,207 | INFO     | exeerrordiag: 
[2025-10-12 09:39:19] 2025-10-12 13:38:55,207 | INFO     | exitcode: 0
[2025-10-12 09:39:19] 2025-10-12 13:38:55,207 | INFO     | exitmsg: OK
[2025-10-12 09:39:19] 2025-10-12 13:38:55,207 | INFO     | cpuconsumptiontime: 58362 s
[2025-10-12 09:39:19] 2025-10-12 13:38:55,207 | INFO     | nevents: 400
[2025-10-12 09:39:19] 2025-10-12 13:38:55,208 | INFO     | neventsw: 0
[2025-10-12 09:39:19] 2025-10-12 13:38:55,208 | INFO     | pid: 6509
[2025-10-12 09:39:19] 2025-10-12 13:38:55,208 | INFO     | pgrp: 6509
[2025-10-12 09:39:19] 2025-10-12 13:38:55,208 | INFO     | corecount: 8
[2025-10-12 09:39:19] 2025-10-12 13:38:55,208 | INFO     | event service: False
[2025-10-12 09:39:19] 2025-10-12 13:38:55,209 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 12: 2349175, 7826: 2376860, 7827: 2385858, 7829: 2386042, 7838: 2386236}
[2025-10-12 09:39:19] 2025-10-12 13:38:55,209 | INFO     | --------------------------------------------------
[2025-10-12 09:39:19] 2025-10-12 13:38:55,209 | INFO     | 
[2025-10-12 09:39:19] 2025-10-12 13:38:55,209 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:39:19] 2025-10-12 13:38:55,240 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,240 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,241 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,241 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,242 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,242 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,242 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,243 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:39:19] 2025-10-12 13:38:55,243 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:39:19] 2025-10-12 13:38:55,244 | INFO     | job 6839319469 has completed (purged errors)
[2025-10-12 09:39:19] 2025-10-12 13:38:55,244 | INFO     | overall cleanup function is called
[2025-10-12 09:39:19] 2025-10-12 13:38:56,253 | INFO     | --- collectZombieJob: --- 10, [6509]
[2025-10-12 09:39:19] 2025-10-12 13:38:56,253 | INFO     | zombie collector waiting for pid 6509
[2025-10-12 09:39:19] 2025-10-12 13:38:56,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:39:19] 2025-10-12 13:38:56,253 | INFO     | collected zombie processes
[2025-10-12 09:39:19] 2025-10-12 13:38:56,253 | INFO     | will attempt to kill all subprocesses of pid=6509
[2025-10-12 09:39:19] 2025-10-12 13:38:56,343 | INFO     | process IDs to be killed: [6509] (in reverse order)
[2025-10-12 09:39:19] 2025-10-12 13:38:56,400 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:39:19] 2025-10-12 13:38:56,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:39:19] 2025-10-12 13:38:56,405 | INFO     | did not find any defunct processes belonging to 6509
[2025-10-12 09:39:19] 2025-10-12 13:38:56,409 | INFO     | did not find any defunct processes belonging to 6509
[2025-10-12 09:39:19] 2025-10-12 13:38:56,409 | INFO     | ready for new job
[2025-10-12 09:39:19] 2025-10-12 13:38:56,409 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:39:19] 2025-10-12 13:38:56,412 | INFO     | ***************************************
[2025-10-12 09:39:19] 2025-10-12 13:38:56,412 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:39:19] 2025-10-12 13:38:56,412 | INFO     | ***************************************
[2025-10-12 09:39:19] 2025-10-12 13:38:56,412 | INFO     | 
[2025-10-12 09:39:19] 2025-10-12 13:38:56,413 | INFO     | architecture information:
[2025-10-12 09:39:19] 2025-10-12 13:38:56,413 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:39:19] 2025-10-12 13:38:56,433 | INFO     | cat /etc/os-release:
[2025-10-12 09:39:19] NAME="CentOS Linux"
[2025-10-12 09:39:19] VERSION="7 (Core)"
[2025-10-12 09:39:19] ID="centos"
[2025-10-12 09:39:19] ID_LIKE="rhel fedora"
[2025-10-12 09:39:19] VERSION_ID="7"
[2025-10-12 09:39:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:39:19] ANSI_COLOR="0;31"
[2025-10-12 09:39:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:39:19] HOME_URL="https://www.centos.org/"
[2025-10-12 09:39:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:39:19] 
[2025-10-12 09:39:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:39:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:39:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:39:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:39:19] 
[2025-10-12 09:39:19] 2025-10-12 13:38:56,433 | INFO     | ***************************************
[2025-10-12 09:39:19] 2025-10-12 13:38:56,936 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:39:19] 2025-10-12 13:38:56,957 | INFO     | sufficient remaining disk space (18579718144 B)
[2025-10-12 09:39:19] 2025-10-12 13:38:56,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:39:19] 2025-10-12 13:38:56,958 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:39:19] 2025-10-12 13:38:56,958 | INFO     | update_server=False
[2025-10-12 09:39:19] 2025-10-12 13:38:56,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:39:19] 2025-10-12 13:38:56,959 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 09:39:19] 2025-10-12 13:38:56,959 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:39:19] 2025-10-12 13:38:56,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:39:19] 2025-10-12 13:38:56,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:39:19] 2025-10-12 13:38:56,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:39:19] 2025-10-12 13:38:56,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:39:19] 2025-10-12 13:38:56,960 | INFO     | aborting loop
[2025-10-12 09:39:19] 2025-10-12 13:38:57,067 | INFO     | all data control threads have been joined
[2025-10-12 09:39:19] 2025-10-12 13:38:57,287 | INFO     | all payload control threads have been joined
[2025-10-12 09:39:19] 2025-10-12 13:38:57,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:39:19] 2025-10-12 13:38:57,659 | INFO     | all job control threads have been joined
[2025-10-12 09:39:19] 2025-10-12 13:38:57,961 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:57,965 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:58,073 | INFO     | [data] control thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:58,075 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:58,131 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:58,221 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:58,292 | INFO     | [payload] control thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:58,299 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:58,665 | INFO     | [job] control thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:58,733 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:58,772 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:59,110 | INFO     | [job] validate thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:59,329 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:38:59,769 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:39:19] 2025-10-12 13:39:00,774 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:39:00,965 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:39:07,440 | INFO     | job.realtimelogging is not enabled
[2025-10-12 09:39:19] 2025-10-12 13:39:08,446 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:39:19] 2025-10-12 13:39:12,247 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:39:19] 2025-10-12 13:39:14,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139869926004544)>', '<ExcThread(monitor, started 139868806039296)>']
[2025-10-12 09:39:19] 2025-10-12 13:39:15,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:39:19] 2025-10-12 13:39:15,050 | INFO     | [monitor] control thread has ended
[2025-10-12 09:39:19] 2025-10-12 13:39:19,324 | INFO     | all workflow threads have been joined
[2025-10-12 09:39:19] 2025-10-12 13:39:19,324 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:39:19] 2025-10-12 13:39:19,336 | INFO     | traces error code: 0
[2025-10-12 09:39:19] 2025-10-12 13:39:19,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:39:19] 2025-10-12 13:39:19,464 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:39:19] 2025-10-12 13:39:19,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:39:19] 2025-10-12 13:39:19,473 [wrapper] pilotpid: 32303
[2025-10-12 09:39:19] 2025-10-12 13:39:19,479 [wrapper] Pilot exit status: 0
[2025-10-12 09:39:19] 2025-10-12 13:39:19,498 [wrapper] pandaids: 6839319469
[2025-10-12 09:39:19] 2025-10-12 13:39:19,542 [wrapper] cleanup supervisor_pilot 30510 32304
[2025-10-12 09:39:19] 2025-10-12 13:39:19,547 [wrapper] Test setup, not cleaning
[2025-10-12 09:39:19] 2025-10-12 13:39:19,552 [wrapper] apfmon messages muted
[2025-10-12 09:39:19] 2025-10-12 13:39:19,557 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:39:19] 2025-10-12 13:39:19,561 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:39:19]  *** Error codes and diagnostics ***
[2025-10-12 09:39:19]     "exeErrorCode": 0,
[2025-10-12 09:39:19]     "exeErrorDiag": "",
[2025-10-12 09:39:19]     "pilotErrorCode": 0,
[2025-10-12 09:39:19]     "pilotErrorDiag": "",
[2025-10-12 09:39:19]  *** Listing of results directory ***
[2025-10-12 09:39:19] total 417140
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 23:35 pilot3.tar.gz
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 23:50 queuedata.json
[2025-10-12 09:39:19] -rwx------ 1 boincer umatlas     36292 Oct 11 23:50 runpilot2-wrapper.sh
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas       100 Oct 12 07:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:39:19] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 07:27 run_atlas
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas       105 Oct 12 07:27 job.xml
[2025-10-12 09:39:19] -rw-r--r-- 2 boincer umatlas 221964470 Oct 12 07:27 EVNT.46676267._003221.pool.root.1
[2025-10-12 09:39:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:27 start_atlas.sh
[2025-10-12 09:39:19] drwxrwx--x 2 boincer umatlas      4096 Oct 12 07:27 shared
[2025-10-12 09:39:19] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 07:27 input.tar.gz
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas         0 Oct 12 07:27 boinc_lockfile
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 07:27 pandaJob.out
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas    975520 Oct 12 07:27 agis_schedconf.cvmfs.json
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas   1560580 Oct 12 07:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:39:19] drwx------ 5 boincer umatlas      4096 Oct 12 07:28 pilot3
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 09:36 init_data.xml
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas 198336927 Oct 12 09:38 HITS.46676269._070171.pool.root.1
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas       529 Oct 12 09:38 boinc_task_state.xml
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas      1048 Oct 12 09:38 memory_monitor_summary.json
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas    374985 Oct 12 09:38 log.46676269._070171.job.log.tgz.1
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas        95 Oct 12 09:38 pilot_heartbeat.json
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas      7847 Oct 12 09:38 heartbeat.json
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 09:39 boinc_mmap_file
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas        27 Oct 12 09:39 wrapper_checkpoint.txt
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas      4624 Oct 12 09:39 pilotlog.txt
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas   1101035 Oct 12 09:39 log.46676269._070171.job.log.1
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas       357 Oct 12 09:39 output.list
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas       620 Oct 12 09:39 runtime_log
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas   1495040 Oct 12 09:39 result.tar.gz
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 09:39 runtime_log.err
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas       660 Oct 12 09:39 faoLDmRH2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmr5SMDmqiPNim.diag
[2025-10-12 09:39:19] -rw-r--r-- 1 boincer umatlas     20779 Oct 12 09:39 stderr.txt
[2025-10-12 09:39:19] HITS file was successfully produced:
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas 198336927 Oct 12 09:38 shared/HITS.pool.root.1
[2025-10-12 09:39:19]  *** Contents of shared directory: ***
[2025-10-12 09:39:19] total 412492
[2025-10-12 09:39:19] -rw-r--r-- 2 boincer umatlas 221964470 Oct 12 07:27 ATLAS.root_0
[2025-10-12 09:39:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:27 start_atlas.sh
[2025-10-12 09:39:19] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 07:27 input.tar.gz
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas 198336927 Oct 12 09:38 HITS.pool.root.1
[2025-10-12 09:39:19] -rw------- 1 boincer umatlas   1495040 Oct 12 09:39 result.tar.gz
09:39:21 (28621): run_atlas exited; CPU time 58296.530501
09:39:21 (28621): called boinc_finish(0)

</stderr_txt>
]]>

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