Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:21:15 (3857525): wrapper (7.7.26015): starting
04:21:15 (3857525): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 04:21:15] Arguments: --nthreads 8
[2025-10-12 04:21:15] Threads: 8
[2025-10-12 04:21:15] Checking for CVMFS
[2025-10-12 04:21:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:21:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:21:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:21:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:21:17] 2.11.3.0 98278 29827 191780 151619 2 217 33147079 45568000 11975 130560 0 207390105 99.861 88432990 13922 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 04:21:17] CVMFS is ok
[2025-10-12 04:21:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:21:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:21:17] Further information can be found at the LHC@home message board.
[2025-10-12 04:21:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:21:17] Checking for apptainer binary...
[2025-10-12 04:21:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:21:17] Running /usr/bin/apptainer --version
[2025-10-12 04:21:17] apptainer version 1.4.1-1.el9
[2025-10-12 04:21:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:21:17] wns0010.triumf.lcg
[2025-10-12 04:21:17] apptainer works
[2025-10-12 04:21:18] Set ATHENA_PROC_NUMBER=8
[2025-10-12 04:21:18] Set ATHENA_CORE_NUMBER=8
[2025-10-12 04:21:18] Starting ATLAS job with PandaID=6841574122
[2025-10-12 04:21:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 04:28:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 04:28:29] 2025-10-12 11:27:54,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 04:28:29] 2025-10-12 11:27:54,547 | WARNING  | wrong length of table data, x=[1760268251.0, 1760268312.0], y=[1594.0, 606161.0] (must be same and length>=4)
[2025-10-12 04:28:29] 2025-10-12 11:27:54,547 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | ..............................
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . Timing measurements:
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . get job = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . initial setup = 7 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . payload setup = 39 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . stage-in = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . payload execution = 98 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . stage-out = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . log creation = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | ..............................
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6841574122/pilotlog.txt
[2025-10-12 04:28:29] 2025-10-12 11:27:54,748 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 04:28:29] - Log from pilotlog.txt -
[2025-10-12 04:28:29] 2025-10-12 11:27:54,485 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6841574122/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 04:28:29] 2025-10-12 11:27:54,486 | INFO     | extracted standard info from prmon json
[2025-10-12 04:28:29] 2025-10-12 11:27:54,486 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 04:28:29] 2025-10-12 11:27:54,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 04:28:29] 2025-10-12 11:27:54,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 04:28:29] 2025-10-12 11:27:54,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 04:28:29] 2025-10-12 11:27:54,547 | WARNING  | wrong length of table data, x=[1760268251.0, 1760268312.0], y=[1594.0, 606161.0] (must be same and length>=4)
[2025-10-12 04:28:29] 2025-10-12 11:27:54,547 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | ..............................
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . Timing measurements:
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . get job = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . initial setup = 7 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . payload setup = 39 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . stage-in = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . payload execution = 98 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . stage-out = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . log creation = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | ..............................
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6841574122/pilotlog.txt
[2025-10-12 04:28:29] 2025-10-12 11:27:54,748 | WARNING  | 
[2025-10-12 04:28:29] [begin log extracts]
[2025-10-12 04:28:29] - Log from pilotlog.txt -
[2025-10-12 04:28:29] 2025-10-12 11:27:54,485 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6841574122/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 04:28:29] 2025-10-12 11:27:54,486 | INFO     | extracted standard info from prmon json
[2025-10-12 04:28:29] 2025-10-12 11:27:54,486 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 04:28:29] 2025-10-12 11:27:54,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 04:28:29] 2025-10-12 11:27:54,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 04:28:29] 2025-10-12 11:27:54,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 04:28:29] 2025-10-12 11:27:54,547 | WARNING  | wrong length of table data, x=[1760268251.0, 1760268312.0], y=[1594.0, 606161.0] (must be same and length>=4)
[2025-10-12 04:28:29] 2025-10-12 11:27:54,547 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | ..............................
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . Timing measurements:
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . get job = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . initial setup = 7 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,560 | INFO     | . payload setup = 39 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . stage-in = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . payload execution = 98 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . stage-out = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | . log creation = 0 s
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | ..............................
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 04:28:29] 2025-10-12 11:27:54,561 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6841574122/pilotlog.txt
[2025-10-12 04:28:29] [end log extracts]
[2025-10-12 04:28:29] 2025-10-12 11:27:54,749 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 04:28:29] 2025-10-12 11:27:54,749 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 04:28:29] 2025-10-12 11:27:55,154 | INFO     | 
[2025-10-12 04:28:29] 2025-10-12 11:27:55,155 | INFO     | job summary report
[2025-10-12 04:28:29] 2025-10-12 11:27:55,155 | INFO     | --------------------------------------------------
[2025-10-12 04:28:29] 2025-10-12 11:27:55,176 | INFO     | PanDA job id: 6841574122
[2025-10-12 04:28:29] 2025-10-12 11:27:55,176 | INFO     | task id: 46376905
[2025-10-12 04:28:29] 2025-10-12 11:27:55,176 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 04:25:16,880 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | pilot state: failed 
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | transexitcode: 65
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | exeerrorcode: 65
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | exitcode: 65
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | cpuconsumptiontime: 20 s
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | nevents: 0
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | neventsw: 0
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | pid: 3868123
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | pgrp: 3868123
[2025-10-12 04:28:29] 2025-10-12 11:27:55,178 | INFO     | corecount: 8
[2025-10-12 04:28:29] 2025-10-12 11:27:55,207 | INFO     | event service: False
[2025-10-12 04:28:29] 2025-10-12 11:27:55,207 | INFO     | sizes: {0: 2348767, 1: 2348767, 12: 2348795, 22: 2348823, 28: 2349113, 33: 2349141, 141: 2372516, 142: 2372492, 144: 2376840, 286: 2377006}
[2025-10-12 04:28:29] 2025-10-12 11:27:55,215 | INFO     | --------------------------------------------------
[2025-10-12 04:28:29] 2025-10-12 11:27:55,215 | INFO     | 
[2025-10-12 04:28:29] 2025-10-12 11:27:55,215 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 04:28:29] 2025-10-12 11:27:55,309 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,309 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,309 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 04:28:29] 2025-10-12 11:27:55,310 | INFO     | job 6841574122 has completed (purged errors)
[2025-10-12 04:28:29] 2025-10-12 11:27:55,311 | INFO     | overall cleanup function is called
[2025-10-12 04:28:29] 2025-10-12 11:27:55,669 | INFO     | PID=3861299 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 04:28:29] 2025-10-12 11:27:55,669 | INFO     | .. there are 26 such processes running
[2025-10-12 04:28:29] 2025-10-12 11:27:56,319 | INFO     | --- collectZombieJob: --- 10, [3868123]
[2025-10-12 04:28:29] 2025-10-12 11:27:56,319 | INFO     | zombie collector waiting for pid 3868123
[2025-10-12 04:28:29] 2025-10-12 11:27:56,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 04:28:29] 2025-10-12 11:27:56,319 | INFO     | collected zombie processes
[2025-10-12 04:28:29] 2025-10-12 11:27:56,320 | INFO     | will attempt to kill all subprocesses of pid=3868123
[2025-10-12 04:28:29] 2025-10-12 11:27:56,874 | INFO     | process IDs to be killed: [3868123] (in reverse order)
[2025-10-12 04:28:29] 2025-10-12 11:27:56,943 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 04:28:29] 2025-10-12 11:27:56,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 04:28:29] 2025-10-12 11:27:56,952 | INFO     | did not find any defunct processes belonging to 3868123
[2025-10-12 04:28:29] 2025-10-12 11:27:56,960 | INFO     | did not find any defunct processes belonging to 3868123
[2025-10-12 04:28:29] 2025-10-12 11:27:56,961 | INFO     | ready for new job
[2025-10-12 04:28:29] 2025-10-12 11:27:56,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 04:28:29] 2025-10-12 11:27:56,963 | INFO     | ***************************************
[2025-10-12 04:28:29] 2025-10-12 11:27:56,963 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 04:28:29] 2025-10-12 11:27:56,963 | INFO     | ***************************************
[2025-10-12 04:28:29] 2025-10-12 11:27:56,963 | INFO     | 
[2025-10-12 04:28:29] 2025-10-12 11:27:56,965 | INFO     | architecture information:
[2025-10-12 04:28:29] 2025-10-12 11:27:56,968 | INFO     | executing command: cat /etc/os-release
[2025-10-12 04:28:29] 2025-10-12 11:27:57,016 | INFO     | cat /etc/os-release:
[2025-10-12 04:28:29] NAME="CentOS Linux"
[2025-10-12 04:28:29] VERSION="7 (Core)"
[2025-10-12 04:28:29] ID="centos"
[2025-10-12 04:28:29] ID_LIKE="rhel fedora"
[2025-10-12 04:28:29] VERSION_ID="7"
[2025-10-12 04:28:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 04:28:29] ANSI_COLOR="0;31"
[2025-10-12 04:28:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 04:28:29] HOME_URL="https://www.centos.org/"
[2025-10-12 04:28:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 04:28:29] 
[2025-10-12 04:28:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 04:28:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 04:28:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 04:28:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 04:28:29] 
[2025-10-12 04:28:29] 2025-10-12 11:27:57,016 | INFO     | ***************************************
[2025-10-12 04:28:29] 2025-10-12 11:27:57,520 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 04:28:29] 2025-10-12 11:27:57,614 | INFO     | sufficient remaining disk space (1204311556096 B)
[2025-10-12 04:28:29] 2025-10-12 11:27:57,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 04:28:29] 2025-10-12 11:27:57,625 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 04:28:29] 2025-10-12 11:27:57,626 | INFO     | update_server=False
[2025-10-12 04:28:29] 2025-10-12 11:27:57,626 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 04:28:29] 2025-10-12 11:27:57,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:28:29] 2025-10-12 11:27:57,630 | INFO     | aborting loop
[2025-10-12 04:28:29] 2025-10-12 11:27:57,904 | INFO     | all data control threads have been joined
[2025-10-12 04:28:29] 2025-10-12 11:27:58,231 | INFO     | all payload control threads have been joined
[2025-10-12 04:28:29] 2025-10-12 11:27:58,631 | INFO     | [job] retrieve thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:58,645 | INFO     | [job] job monitor thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:58,659 | INFO     | all job control threads have been joined
[2025-10-12 04:28:29] 2025-10-12 11:27:58,716 | INFO     | [payload] failed_post thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:58,910 | INFO     | [data] control thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:59,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 04:28:29] 2025-10-12 11:27:59,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 04:28:29] 2025-10-12 11:27:59,238 | INFO     | [payload] control thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:59,259 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:59,300 | INFO     | [data] copytool_in thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:59,395 | INFO     | [payload] validate_post thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:59,447 | INFO     | [job] validate thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:59,638 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:59,665 | INFO     | [job] control thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:59,821 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:27:59,827 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:28:00,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:28:29] 2025-10-12 11:28:01,094 | INFO     | [data] copytool_out thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:28:01,113 | INFO     | [job] queue monitor thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:28:03,209 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 04:28:29] 2025-10-12 11:28:12,407 | INFO     | [monitor] cgroup control has ended
[2025-10-12 04:28:29] 2025-10-12 11:28:13,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139981188269888)>', '<ExcThread(monitor, started 139980416472832)>']
[2025-10-12 04:28:29] 2025-10-12 11:28:18,660 | INFO     | all workflow threads have been joined
[2025-10-12 04:28:29] 2025-10-12 11:28:18,660 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 04:28:29] 2025-10-12 11:28:18,661 | INFO     | traces error code: 0
[2025-10-12 04:28:29] 2025-10-12 11:28:18,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 04:28:29] 2025-10-12 11:28:28,440 | INFO     | PID=3861299 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 04:28:29] 2025-10-12 11:28:28,441 | INFO     | .. there are 26 such processes running
[2025-10-12 04:28:29] 2025-10-12 11:28:28,446 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 04:28:29] 2025-10-12 11:28:28,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 04:28:29] 2025-10-12 11:28:28,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 04:28:29] 2025-10-12 11:28:28,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 04:28:29] 2025-10-12 11:28:28,447 | INFO     | [monitor] control thread has ended
[2025-10-12 04:28:29] 2025-10-12 11:28:28,674 [wrapper] ==== pilot stdout END ====
[2025-10-12 04:28:29] 2025-10-12 11:28:28,676 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 04:28:29] 2025-10-12 11:28:28,678 [wrapper] pilotpid: 3861299
[2025-10-12 04:28:29] 2025-10-12 11:28:28,680 [wrapper] Pilot exit status: 0
[2025-10-12 04:28:29] 2025-10-12 11:28:28,693 [wrapper] pandaids: 6841574122
[2025-10-12 04:28:29] 2025-10-12 11:28:28,778 [wrapper] cleanup supervisor_pilot 3861305 3861300
[2025-10-12 04:28:29] 2025-10-12 11:28:28,789 [wrapper] Test setup, not cleaning
[2025-10-12 04:28:29] 2025-10-12 11:28:28,797 [wrapper] apfmon messages muted
[2025-10-12 04:28:29] 2025-10-12 11:28:28,835 [wrapper] ==== wrapper stdout END ====
[2025-10-12 04:28:29] 2025-10-12 11:28:28,846 [wrapper] ==== wrapper stderr END ====
[2025-10-12 04:28:29]  *** Error codes and diagnostics ***
[2025-10-12 04:28:29]     "exeErrorCode": 65,
[2025-10-12 04:28:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 04:28:29]     "pilotErrorCode": 1305,
[2025-10-12 04:28:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 04:28:29]  *** Listing of results directory ***
[2025-10-12 04:28:29] total 214296
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc    557409 Oct 12 02:04 pilot3.tar.gz
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc      5112 Oct 12 02:13 queuedata.json
[2025-10-12 04:28:29] -rwx------. 1 boinc boinc     36292 Oct 12 02:13 runpilot2-wrapper.sh
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc       100 Oct 12 04:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 04:28:29] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 04:21 run_atlas
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc       105 Oct 12 04:21 job.xml
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc      6444 Oct 12 04:21 init_data.xml
[2025-10-12 04:28:29] -rw-r--r--. 2 boinc boinc 215287152 Oct 12 04:21 EVNT.46376901._004605.pool.root.1
[2025-10-12 04:28:29] -rw-r--r--. 2 boinc boinc     15120 Oct 12 04:21 start_atlas.sh
[2025-10-12 04:28:29] drwxrwx--x. 2 boinc boinc      4096 Oct 12 04:21 shared
[2025-10-12 04:28:29] -rw-r--r--. 2 boinc boinc    569670 Oct 12 04:21 input.tar.gz
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc         0 Oct 12 04:21 boinc_lockfile
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc      2521 Oct 12 04:21 pandaJob.out
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc    975520 Oct 12 04:22 agis_schedconf.cvmfs.json
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc   1560580 Oct 12 04:22 agis_ddmendpoints.agis.ALL.json
[2025-10-12 04:28:29] drwx------. 5 boinc boinc      4096 Oct 12 04:22 pilot3
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc       524 Oct 12 04:25 boinc_task_state.xml
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc       993 Oct 12 04:25 memory_monitor_summary.json
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc     22249 Oct 12 04:25 log.46376905._136407.job.log.tgz.1
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc      8397 Oct 12 04:27 heartbeat.json
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc       823 Oct 12 04:28 pilotlog.txt
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc        95 Oct 12 04:28 pilot_heartbeat.json
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc    102600 Oct 12 04:28 log.46376905._136407.job.log.1
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc        23 Oct 12 04:28 wrapper_checkpoint.txt
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc       188 Oct 12 04:28 output.list
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc       620 Oct 12 04:28 runtime_log
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc    143360 Oct 12 04:28 result.tar.gz
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc      8526 Oct 12 04:28 runtime_log.err
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc       645 Oct 12 04:28 j2pNDmGK7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrJjNDmYcdaWn.diag
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc      8192 Oct 12 04:28 boinc_mmap_file
[2025-10-12 04:28:29] -rw-r--r--. 1 boinc boinc     22007 Oct 12 04:28 stderr.txt
[2025-10-12 04:28:29] No HITS result produced
[2025-10-12 04:28:29]  *** Contents of shared directory: ***
[2025-10-12 04:28:29] total 210964
[2025-10-12 04:28:29] -rw-r--r--. 2 boinc boinc 215287152 Oct 12 04:21 ATLAS.root_0
[2025-10-12 04:28:29] -rw-r--r--. 2 boinc boinc     15120 Oct 12 04:21 start_atlas.sh
[2025-10-12 04:28:29] -rw-r--r--. 2 boinc boinc    569670 Oct 12 04:21 input.tar.gz
[2025-10-12 04:28:29] -rw-------. 1 boinc boinc    143360 Oct 12 04:28 result.tar.gz
04:28:31 (3857525): run_atlas exited; CPU time 32.796168
04:28:31 (3857525): called boinc_finish(0)

</stderr_txt>
]]>

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