Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:22:50 (13336): wrapper (7.7.26015): starting
17:22:50 (13336): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:22:50] Arguments: --nthreads 8
[2025-10-12 17:22:50] Threads: 8
[2025-10-12 17:22:50] Checking for CVMFS
[2025-10-12 17:22:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:22:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:22:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:22:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:22:52] 2.11.2.0 14831 24041 91388 151625 3 60 16518218 25165824 4632 130560 0 5907419 99.927 2464695 1268 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 17:22:52] CVMFS is ok
[2025-10-12 17:22:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:22:52] Checking for apptainer binary...
[2025-10-12 17:22:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:22:52] Running /usr/bin/apptainer --version
[2025-10-12 17:22:52] apptainer version 1.3.2-1.el7
[2025-10-12 17:22:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:22:58] cg-vwn334.simple-grid.lan
[2025-10-12 17:22:58] apptainer works
[2025-10-12 17:22:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:22:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:22:58] Starting ATLAS job with PandaID=6838849744
[2025-10-12 17:22:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:39:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:39:52] 2025-10-12 19:39:05,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:39:52] 2025-10-12 19:39:05,823 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:39:52] 2025-10-12 19:39:05,828 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:39:52] 2025-10-12 19:39:05,829 | INFO     | sum of square deviations: 4286517580.0
[2025-10-12 21:39:52] 2025-10-12 19:39:05,831 | INFO     | sum of deviations: 38961711166.50002
[2025-10-12 21:39:52] 2025-10-12 19:39:05,831 | INFO     | mean x: 1760290533.5
[2025-10-12 21:39:52] 2025-10-12 19:39:05,831 | INFO     | mean y: 2476926.904166667
[2025-10-12 21:39:52] 2025-10-12 19:39:05,832 | INFO     | -- intersect: -15997441434.646385
[2025-10-12 21:39:52] 2025-10-12 19:39:05,832 | INFO     | intersect: -15997441434.646385
[2025-10-12 21:39:52] 2025-10-12 19:39:05,832 | INFO     | chi2: 7.153484198689976
[2025-10-12 21:39:52] 2025-10-12 19:39:05,833 | INFO     | sum of square deviations: 4024149870.0
[2025-10-12 21:39:52] 2025-10-12 19:39:05,834 | INFO     | sum of deviations: 54115208953.0
[2025-10-12 21:39:52] 2025-10-12 19:39:05,835 | INFO     | mean x: 1760290381.0
[2025-10-12 21:39:52] 2025-10-12 19:39:05,835 | INFO     | mean y: 2485579.429787234
[2025-10-12 21:39:52] 2025-10-12 19:39:05,835 | INFO     | -- intersect: -23669217727.62696
[2025-10-12 21:39:52] 2025-10-12 19:39:05,835 | INFO     | intersect: -23669217727.62696
[2025-10-12 21:39:52] 2025-10-12 19:39:05,836 | INFO     | chi2: 6.450689746753011
[2025-10-12 21:39:52] 2025-10-12 19:39:05,836 | INFO     | current chi2=6.450689746753011 (change=9.824505547459914 %)
[2025-10-12 21:39:52] 2025-10-12 19:39:05,836 | INFO     | right removable region: 234
[2025-10-12 21:39:52] 2025-10-12 19:39:05,837 | INFO     | sum of square deviations: 4024149870.0
[2025-10-12 21:39:52] 2025-10-12 19:39:05,839 | INFO     | sum of deviations: -44393724475.00007
[2025-10-12 21:39:52] 2025-10-12 19:39:05,839 | INFO     | mean x: 1760290686.0
[2025-10-12 21:39:52] 2025-10-12 19:39:05,839 | INFO     | mean y: 2525337.480851064
[2025-10-12 21:39:52] 2025-10-12 19:39:05,839 | INFO     | -- intersect: 19421747343.293686
[2025-10-12 21:39:52] 2025-10-12 19:39:05,840 | INFO     | intersect: 19421747343.293686
[2025-10-12 21:39:52] 2025-10-12 19:39:05,840 | INFO     | chi2: 2.3802083153607154
[2025-10-12 21:39:52] 2025-10-12 19:39:05,840 | INFO     | current chi2=2.3802083153607154 (change=66.72658736288807 %)
[2025-10-12 21:39:52] 2025-10-12 19:39:05,841 | INFO     | sum of square deviations: 3772712597.5
[2025-10-12 21:39:52] 2025-10-12 19:39:05,843 | INFO     | sum of deviations: -83740745313.5
[2025-10-12 21:39:52] 2025-10-12 19:39:05,843 | INFO     | mean x: 1760290838.5
[2025-10-12 21:39:52] 2025-10-12 19:39:05,843 | INFO     | mean y: 2549044.039130435
[2025-10-12 21:39:52] 2025-10-12 19:39:05,843 | INFO     | -- intersect: 39074718729.63784
[2025-10-12 21:39:52] 2025-10-12 19:39:05,843 | INFO     | intersect: 39074718729.63784
[2025-10-12 21:39:52] 2025-10-12 19:39:05,843 | INFO     | chi2: 1.021183703908042
[2025-10-12 21:39:52] 2025-10-12 19:39:05,844 | INFO     | current chi2=1.021183703908042 (change=57.09687688603492 %)
[2025-10-12 21:39:52] 2025-10-12 19:39:05,844 | INFO     | sum of square deviations: 3531973200.0
[2025-10-12 21:39:52] 2025-10-12 19:39:05,849 | INFO     | sum of deviations: -80247045984.0
[2025-10-12 21:39:52] 2025-10-12 19:39:05,849 | INFO     | mean x: 1760290991.0
[2025-10-12 21:39:52] 2025-10-12 19:39:05,849 | INFO     | mean y: 2546805.231111111
[2025-10-12 21:39:52] 2025-10-12 19:39:05,849 | INFO     | -- intersect: 39996664569.2045
[2025-10-12 21:39:52] 2025-10-12 19:39:05,850 | INFO     | intersect: 39996664569.2045
[2025-10-12 21:39:52] 2025-10-12 19:39:05,850 | INFO     | chi2: 1.0109044504990485
[2025-10-12 21:39:52] 2025-10-12 19:39:05,850 | INFO     | current chi2=1.0109044504990485 (change=1.0066017866966612 %)
[2025-10-12 21:39:52] 2025-10-12 19:39:05,850 | INFO     | left removable region: 30
[2025-10-12 21:39:52] 2025-10-12 19:39:05,851 | INFO     | sum of square deviations: 2632440055.0
[2025-10-12 21:39:52] 2025-10-12 19:39:05,852 | INFO     | sum of deviations: -43436690289.99998
[2025-10-12 21:39:52] 2025-10-12 19:39:05,853 | INFO     | mean x: 1760291265.5
[2025-10-12 21:39:52] 2025-10-12 19:39:05,853 | INFO     | mean y: 2543240.274509804
[2025-10-12 21:39:52] 2025-10-12 19:39:05,853 | INFO     | -- intersect: 29048304937.482697
[2025-10-12 21:39:52] 2025-10-12 19:39:05,853 | INFO     | intersect: 29048304937.482697
[2025-10-12 21:39:52] 2025-10-12 19:39:05,853 | INFO     | chi2: 0.20315159487532158
[2025-10-12 21:39:52] 2025-10-12 19:39:05,854 | INFO     | -- intersect: 29048304937.482697
[2025-10-12 21:39:52] 2025-10-12 19:39:05,854 | INFO     | current memory leak: -16.50 B/s (using 204 data points, chi2=0.20)
[2025-10-12 21:39:52] 2025-10-12 19:39:05,857 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 21:39:52] 2025-10-12 19:39:05,858 | INFO     | ..............................
[2025-10-12 21:39:52] 2025-10-12 19:39:05,858 | INFO     | . Timing measurements:
[2025-10-12 21:39:52] 2025-10-12 19:39:05,858 | INFO     | . get job = 0 s
[2025-10-12 21:39:52] 2025-10-12 19:39:05,858 | INFO     | . initial setup = 6 s
[2025-10-12 21:39:52] 2025-10-12 19:39:05,858 | INFO     | . payload setup = 124 s
[2025-10-12 21:39:52] 2025-10-12 19:39:05,858 | INFO     | . stage-in = 0 s
[2025-10-12 21:39:52] 2025-10-12 19:39:05,858 | INFO     | . payload execution = 14753 s
[2025-10-12 21:39:52] 2025-10-12 19:39:05,858 | INFO     | . stage-out = 4 s
[2025-10-12 21:39:52] 2025-10-12 19:39:05,858 | INFO     | . log creation = 1 s
[2025-10-12 21:39:52] 2025-10-12 19:39:05,858 | INFO     | ..............................
[2025-10-12 21:39:52] 2025-10-12 19:39:06,038 | INFO     | 
[2025-10-12 21:39:52] 2025-10-12 19:39:06,038 | INFO     | job summary report
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | --------------------------------------------------
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | PanDA job id: 6838849744
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | task id: 46676269
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | errors: (none)
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | pilot state: finished 
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | transexitcode: 0
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | exeerrorcode: 0
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | exeerrordiag: 
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | exitcode: 0
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | exitmsg: OK
[2025-10-12 21:39:52] 2025-10-12 19:39:06,039 | INFO     | cpuconsumptiontime: 55110 s
[2025-10-12 21:39:52] 2025-10-12 19:39:06,040 | INFO     | nevents: 400
[2025-10-12 21:39:52] 2025-10-12 19:39:06,040 | INFO     | neventsw: 0
[2025-10-12 21:39:52] 2025-10-12 19:39:06,040 | INFO     | pid: 23684
[2025-10-12 21:39:52] 2025-10-12 19:39:06,040 | INFO     | pgrp: 23684
[2025-10-12 21:39:52] 2025-10-12 19:39:06,040 | INFO     | corecount: 8
[2025-10-12 21:39:52] 2025-10-12 19:39:06,040 | INFO     | event service: False
[2025-10-12 21:39:52] 2025-10-12 19:39:06,040 | INFO     | sizes: {0: 2348029, 1: 2348885, 12: 2348885, 23: 2348913, 34: 2348941, 44: 2348969, 55: 2349125, 66: 2349153, 76: 2349181, 87: 2349237, 95: 2349527, 98: 2349835, 1
[2025-10-12 21:39:52] 2025-10-12 19:39:06,040 | INFO     | --------------------------------------------------
[2025-10-12 21:39:52] 2025-10-12 19:39:06,040 | INFO     | 
[2025-10-12 21:39:52] 2025-10-12 19:39:06,040 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-12 21:39:52] 2025-10-12 19:39:06,496 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,496 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,496 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,497 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,497 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,498 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,498 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:39:52] 2025-10-12 19:39:06,498 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,498 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:39:52] 2025-10-12 19:39:06,498 | INFO     | job 6838849744 has completed (purged errors)
[2025-10-12 21:39:52] 2025-10-12 19:39:06,498 | INFO     | overall cleanup function is called
[2025-10-12 21:39:52] 2025-10-12 19:39:07,507 | INFO     | --- collectZombieJob: --- 10, [23684]
[2025-10-12 21:39:52] 2025-10-12 19:39:07,508 | INFO     | zombie collector waiting for pid 23684
[2025-10-12 21:39:52] 2025-10-12 19:39:07,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:39:52] 2025-10-12 19:39:07,508 | INFO     | collected zombie processes
[2025-10-12 21:39:52] 2025-10-12 19:39:07,508 | INFO     | will attempt to kill all subprocesses of pid=23684
[2025-10-12 21:39:52] 2025-10-12 19:39:07,629 | INFO     | process IDs to be killed: [23684] (in reverse order)
[2025-10-12 21:39:52] 2025-10-12 19:39:08,599 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:39:52] 2025-10-12 19:39:08,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:39:52] 2025-10-12 19:39:08,603 | INFO     | did not find any defunct processes belonging to 23684
[2025-10-12 21:39:52] 2025-10-12 19:39:08,606 | INFO     | did not find any defunct processes belonging to 23684
[2025-10-12 21:39:52] 2025-10-12 19:39:08,607 | INFO     | ready for new job
[2025-10-12 21:39:52] 2025-10-12 19:39:08,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:39:52] 2025-10-12 19:39:08,609 | INFO     | ***************************************
[2025-10-12 21:39:52] 2025-10-12 19:39:08,609 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:39:52] 2025-10-12 19:39:08,609 | INFO     | ***************************************
[2025-10-12 21:39:52] 2025-10-12 19:39:08,609 | INFO     | 
[2025-10-12 21:39:52] 2025-10-12 19:39:08,610 | INFO     | pilot is running in a VM
[2025-10-12 21:39:52] 2025-10-12 19:39:08,610 | INFO     | architecture information:
[2025-10-12 21:39:52] 2025-10-12 19:39:08,624 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:39:52] 2025-10-12 19:39:08,765 | INFO     | cat /etc/os-release:
[2025-10-12 21:39:52] NAME="CentOS Linux"
[2025-10-12 21:39:52] VERSION="7 (Core)"
[2025-10-12 21:39:52] ID="centos"
[2025-10-12 21:39:52] ID_LIKE="rhel fedora"
[2025-10-12 21:39:52] VERSION_ID="7"
[2025-10-12 21:39:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:39:52] ANSI_COLOR="0;31"
[2025-10-12 21:39:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:39:52] HOME_URL="https://www.centos.org/"
[2025-10-12 21:39:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:39:52] 
[2025-10-12 21:39:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:39:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:39:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:39:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:39:52] 
[2025-10-12 21:39:52] 2025-10-12 19:39:08,766 | INFO     | ***************************************
[2025-10-12 21:39:52] 2025-10-12 19:39:09,269 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-12 21:39:52] 2025-10-12 19:39:09,355 | INFO     | sufficient remaining disk space (495820210176 B)
[2025-10-12 21:39:52] 2025-10-12 19:39:09,355 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:39:52] 2025-10-12 19:39:09,355 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:39:52] 2025-10-12 19:39:09,356 | INFO     | update_server=False
[2025-10-12 21:39:52] 2025-10-12 19:39:09,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:39:52] 2025-10-12 19:39:09,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:39:52] 2025-10-12 19:39:09,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:39:52] 2025-10-12 19:39:09,362 | INFO     | aborting loop
[2025-10-12 21:39:52] 2025-10-12 19:39:09,469 | INFO     | all job control threads have been joined
[2025-10-12 21:39:52] 2025-10-12 19:39:10,250 | INFO     | all data control threads have been joined
[2025-10-12 21:39:52] 2025-10-12 19:39:10,361 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:10,367 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:10,474 | INFO     | [job] control thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:10,614 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:10,644 | INFO     | all payload control threads have been joined
[2025-10-12 21:39:52] 2025-10-12 19:39:10,989 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:11,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:39:52] 2025-10-12 19:39:11,008 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:11,144 | INFO     | [job] validate thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:11,256 | INFO     | [data] control thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:11,311 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:11,363 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:11,364 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:11,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:39:52] 2025-10-12 19:39:11,642 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:11,649 | INFO     | [payload] control thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:11,674 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:12,010 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:15,497 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:39:52] 2025-10-12 19:39:38,401 | INFO     | PID=17139 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 21:39:52] 2025-10-12 19:39:38,401 | INFO     | .. there are 9 such processes running
[2025-10-12 21:39:52] 2025-10-12 19:39:38,401 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:39:52] 2025-10-12 19:39:38,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:39:52] 2025-10-12 19:39:38,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:39:52] 2025-10-12 19:39:42,022 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:39:52] 2025-10-12 19:39:42,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666330498880)>', '<ExcThread(monitor, started 140665665083136)>']
[2025-10-12 21:39:52] 2025-10-12 19:39:43,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:39:52] 2025-10-12 19:39:43,431 | INFO     | [monitor] control thread has ended
[2025-10-12 21:39:52] 2025-10-12 19:39:47,912 | INFO     | all workflow threads have been joined
[2025-10-12 21:39:52] 2025-10-12 19:39:47,912 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:39:52] 2025-10-12 19:39:47,913 | INFO     | traces error code: 0
[2025-10-12 21:39:52] 2025-10-12 19:39:47,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:39:52] 2025-10-12 19:39:48,239 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:39:52] 2025-10-12 19:39:48,281 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:39:52] 2025-10-12 19:39:48,340 [wrapper] pilotpid: 17139
[2025-10-12 21:39:52] 2025-10-12 19:39:48,440 [wrapper] Pilot exit status: 0
[2025-10-12 21:39:52] 2025-10-12 19:39:48,893 [wrapper] pandaids: 6838849744
[2025-10-12 21:39:52] 2025-10-12 19:39:49,387 [wrapper] cleanup supervisor_pilot   895 17140
[2025-10-12 21:39:52] 2025-10-12 19:39:49,498 [wrapper] Test setup, not cleaning
[2025-10-12 21:39:52] 2025-10-12 19:39:49,566 [wrapper] apfmon messages muted
[2025-10-12 21:39:52] 2025-10-12 19:39:49,682 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:39:52] 2025-10-12 19:39:49,744 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:39:52]  *** Error codes and diagnostics ***
[2025-10-12 21:39:52]     "exeErrorCode": 0,
[2025-10-12 21:39:52]     "exeErrorDiag": "",
[2025-10-12 21:39:52]     "pilotErrorCode": 0,
[2025-10-12 21:39:52]     "pilotErrorDiag": "",
[2025-10-12 21:39:52]  *** Listing of results directory ***
[2025-10-12 21:39:52] total 413180
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc    557409 Oct 11 20:41 pilot3.tar.gz
[2025-10-12 21:39:52] -rwx------. 1 boinc boinc     36292 Oct 11 20:45 runpilot2-wrapper.sh
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc      5112 Oct 11 20:45 queuedata.json
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc       100 Oct 12 17:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:39:52] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 17:22 run_atlas
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc       105 Oct 12 17:22 job.xml
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc      6388 Oct 12 17:22 init_data.xml
[2025-10-12 21:39:52] -rw-r--r--. 2 boinc boinc 221076098 Oct 12 17:22 EVNT.46676267._002530.pool.root.1
[2025-10-12 21:39:52] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:22 start_atlas.sh
[2025-10-12 21:39:52] drwxrwx--x. 2 boinc boinc        68 Oct 12 17:22 shared
[2025-10-12 21:39:52] -rw-r--r--. 2 boinc boinc    569678 Oct 12 17:22 input.tar.gz
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc         0 Oct 12 17:22 boinc_lockfile
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc      2550 Oct 12 17:22 pandaJob.out
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc    975528 Oct 12 17:26 agis_schedconf.cvmfs.json
[2025-10-12 21:39:52] drwx------. 5 boinc boinc      4096 Oct 12 17:26 pilot3
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc 193096000 Oct 12 21:36 HITS.46676269._063005.pool.root.1
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc       531 Oct 12 21:36 boinc_task_state.xml
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc      1017 Oct 12 21:37 memory_monitor_summary.json
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc   1560580 Oct 12 21:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc    482788 Oct 12 21:37 log.46676269._063005.job.log.tgz.1
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc      7786 Oct 12 21:39 heartbeat.json
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc        95 Oct 12 21:39 pilot_heartbeat.json
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc      8192 Oct 12 21:39 boinc_mmap_file
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc        28 Oct 12 21:39 wrapper_checkpoint.txt
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc      4884 Oct 12 21:39 pilotlog.txt
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc   2034379 Oct 12 21:39 log.46676269._063005.job.log.1
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc       357 Oct 12 21:39 output.list
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc       620 Oct 12 21:39 runtime_log
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc   2539520 Oct 12 21:39 result.tar.gz
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc      8703 Oct 12 21:39 runtime_log.err
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc       656 Oct 12 21:39 Qq0KDm5ltR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1IhNDm7ACxJo.diag
[2025-10-12 21:39:52] -rw-r--r--. 1 boinc boinc     20536 Oct 12 21:39 stderr.txt
[2025-10-12 21:39:52] HITS file was successfully produced:
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc 193096000 Oct 12 21:36 shared/HITS.pool.root.1
[2025-10-12 21:39:52]  *** Contents of shared directory: ***
[2025-10-12 21:39:52] total 407524
[2025-10-12 21:39:52] -rw-r--r--. 2 boinc boinc 221076098 Oct 12 17:22 ATLAS.root_0
[2025-10-12 21:39:52] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:22 start_atlas.sh
[2025-10-12 21:39:52] -rw-r--r--. 2 boinc boinc    569678 Oct 12 17:22 input.tar.gz
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc 193096000 Oct 12 21:36 HITS.pool.root.1
[2025-10-12 21:39:52] -rw-------. 1 boinc boinc   2539520 Oct 12 21:39 result.tar.gz
21:39:53 (13336): run_atlas exited; CPU time 55320.402446
21:39:53 (13336): called boinc_finish(0)

</stderr_txt>
]]>

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