Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:01:25 (4040): wrapper (7.7.26015): starting
17:01:25 (4040): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:01:25] Arguments: --nthreads 8
[2025-10-12 17:01:25] Threads: 8
[2025-10-12 17:01:25] Checking for CVMFS
[2025-10-12 17:01:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:01:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:01:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:01:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:01:28] 2.11.2.0 14339 220743 141984 151623 1 61 20558566 25165824 4632 130560 0 134161902 99.892 69671537 4446 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 17:01:28] CVMFS is ok
[2025-10-12 17:01:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:01:28] Checking for apptainer binary...
[2025-10-12 17:01:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:01:28] Running /usr/bin/apptainer --version
[2025-10-12 17:01:28] apptainer version 1.3.2-1.el7
[2025-10-12 17:01:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:01:36] cg-vwn496.simple-grid.lan
[2025-10-12 17:01:36] apptainer works
[2025-10-12 17:01:37] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:01:37] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:01:37] Starting ATLAS job with PandaID=6839591572
[2025-10-12 17:01:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:47:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:47:46] 2025-10-12 18:46:44,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:47:46] 2025-10-12 18:46:44,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:47:46] 2025-10-12 18:46:44,330 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:47:46] 2025-10-12 18:46:44,331 | INFO     | sum of square deviations: 2871616632.5
[2025-10-12 20:47:46] 2025-10-12 18:46:44,332 | INFO     | sum of deviations: 2568439678.499998
[2025-10-12 20:47:46] 2025-10-12 18:46:44,333 | INFO     | mean x: 1760288387.5
[2025-10-12 20:47:46] 2025-10-12 18:46:44,333 | INFO     | mean y: 2509781.719047619
[2025-10-12 20:47:46] 2025-10-12 18:46:44,333 | INFO     | -- intersect: -1571932464.1185086
[2025-10-12 20:47:46] 2025-10-12 18:46:44,333 | INFO     | intersect: -1571932464.1185086
[2025-10-12 20:47:46] 2025-10-12 18:46:44,333 | INFO     | chi2: 5.998526873352967
[2025-10-12 20:47:46] 2025-10-12 18:46:44,334 | INFO     | sum of square deviations: 2671343110.0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,335 | INFO     | sum of deviations: 17392997404.999996
[2025-10-12 20:47:46] 2025-10-12 18:46:44,336 | INFO     | mean x: 1760288235.0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,336 | INFO     | mean y: 2520866.0780487806
[2025-10-12 20:47:46] 2025-10-12 18:46:44,336 | INFO     | -- intersect: -11458638349.59718
[2025-10-12 20:47:46] 2025-10-12 18:46:44,336 | INFO     | intersect: -11458638349.59718
[2025-10-12 20:47:46] 2025-10-12 18:46:44,336 | INFO     | chi2: 5.27927944293077
[2025-10-12 20:47:46] 2025-10-12 18:46:44,336 | INFO     | current chi2=5.27927944293077 (change=11.99040107025748 %)
[2025-10-12 20:47:46] 2025-10-12 18:46:44,336 | INFO     | right removable region: 204
[2025-10-12 20:47:46] 2025-10-12 18:46:44,337 | INFO     | sum of square deviations: 2671343110.0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,338 | INFO     | sum of deviations: -68966411326.99998
[2025-10-12 20:47:46] 2025-10-12 18:46:44,338 | INFO     | mean x: 1760288540.0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,339 | INFO     | mean y: 2564163.9853658536
[2025-10-12 20:47:46] 2025-10-12 18:46:44,339 | INFO     | -- intersect: 45448161567.54925
[2025-10-12 20:47:46] 2025-10-12 18:46:44,339 | INFO     | intersect: 45448161567.54925
[2025-10-12 20:47:46] 2025-10-12 18:46:44,339 | INFO     | chi2: 1.522199751913592
[2025-10-12 20:47:46] 2025-10-12 18:46:44,339 | INFO     | current chi2=1.522199751913592 (change=74.62377373558827 %)
[2025-10-12 20:47:46] 2025-10-12 18:46:44,340 | INFO     | sum of square deviations: 2480604650.0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,341 | INFO     | sum of deviations: -87057981189.50002
[2025-10-12 20:47:46] 2025-10-12 18:46:44,341 | INFO     | mean x: 1760288692.5
[2025-10-12 20:47:46] 2025-10-12 18:46:44,341 | INFO     | mean y: 2578480.445
[2025-10-12 20:47:46] 2025-10-12 18:46:44,342 | INFO     | -- intersect: 61780734011.90164
[2025-10-12 20:47:46] 2025-10-12 18:46:44,342 | INFO     | intersect: 61780734011.90164
[2025-10-12 20:47:46] 2025-10-12 18:46:44,342 | INFO     | chi2: 0.9833877073230168
[2025-10-12 20:47:46] 2025-10-12 18:46:44,342 | INFO     | current chi2=0.9833877073230168 (change=35.396934200864386 %)
[2025-10-12 20:47:46] 2025-10-12 18:46:44,343 | INFO     | sum of square deviations: 2299168690.0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,344 | INFO     | sum of deviations: -82837170278.0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,344 | INFO     | mean x: 1760288845.0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,344 | INFO     | mean y: 2574924.7128205127
[2025-10-12 20:47:46] 2025-10-12 18:46:44,344 | INFO     | -- intersect: 63424344465.132645
[2025-10-12 20:47:46] 2025-10-12 18:46:44,345 | INFO     | intersect: 63424344465.132645
[2025-10-12 20:47:46] 2025-10-12 18:46:44,345 | INFO     | chi2: 0.9821006119617189
[2025-10-12 20:47:46] 2025-10-12 18:46:44,345 | INFO     | current chi2=0.9821006119617189 (change=0.13088381639441418 %)
[2025-10-12 20:47:46] 2025-10-12 18:46:44,346 | INFO     | left removable region: 30
[2025-10-12 20:47:46] 2025-10-12 18:46:44,346 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 20:47:46] 2025-10-12 18:46:44,347 | INFO     | sum of deviations: -51315295990.49998
[2025-10-12 20:47:46] 2025-10-12 18:46:44,347 | INFO     | mean x: 1760289119.5
[2025-10-12 20:47:46] 2025-10-12 18:46:44,347 | INFO     | mean y: 2573803.557471264
[2025-10-12 20:47:46] 2025-10-12 18:46:44,347 | INFO     | -- intersect: 55301795484.50977
[2025-10-12 20:47:46] 2025-10-12 18:46:44,348 | INFO     | intersect: 55301795484.50977
[2025-10-12 20:47:46] 2025-10-12 18:46:44,348 | INFO     | chi2: 0.180181044595377
[2025-10-12 20:47:46] 2025-10-12 18:46:44,348 | INFO     | -- intersect: 55301795484.50977
[2025-10-12 20:47:46] 2025-10-12 18:46:44,348 | INFO     | current memory leak: -31.41 B/s (using 174 data points, chi2=0.18)
[2025-10-12 20:47:46] 2025-10-12 18:46:44,349 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2025-10-12 20:47:46] 2025-10-12 18:46:44,349 | INFO     | ..............................
[2025-10-12 20:47:46] 2025-10-12 18:46:44,349 | INFO     | . Timing measurements:
[2025-10-12 20:47:46] 2025-10-12 18:46:44,349 | INFO     | . get job = 0 s
[2025-10-12 20:47:46] 2025-10-12 18:46:44,349 | INFO     | . initial setup = 5 s
[2025-10-12 20:47:46] 2025-10-12 18:46:44,350 | INFO     | . payload setup = 140 s
[2025-10-12 20:47:46] 2025-10-12 18:46:44,350 | INFO     | . stage-in = 0 s
[2025-10-12 20:47:46] 2025-10-12 18:46:44,350 | INFO     | . payload execution = 12940 s
[2025-10-12 20:47:46] 2025-10-12 18:46:44,350 | INFO     | . stage-out = 1 s
[2025-10-12 20:47:46] 2025-10-12 18:46:44,350 | INFO     | . log creation = 0 s
[2025-10-12 20:47:46] 2025-10-12 18:46:44,350 | INFO     | ..............................
[2025-10-12 20:47:46] 2025-10-12 18:46:44,801 | INFO     | 
[2025-10-12 20:47:46] 2025-10-12 18:46:44,801 | INFO     | job summary report
[2025-10-12 20:47:46] 2025-10-12 18:46:44,801 | INFO     | --------------------------------------------------
[2025-10-12 20:47:46] 2025-10-12 18:46:44,801 | INFO     | PanDA job id: 6839591572
[2025-10-12 20:47:46] 2025-10-12 18:46:44,801 | INFO     | task id: 46676269
[2025-10-12 20:47:46] 2025-10-12 18:46:44,801 | INFO     | errors: (none)
[2025-10-12 20:47:46] 2025-10-12 18:46:44,801 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | pilot state: finished 
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | transexitcode: 0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | exeerrorcode: 0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | exeerrordiag: 
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | exitcode: 0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | exitmsg: OK
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | cpuconsumptiontime: 48474 s
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | nevents: 400
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | neventsw: 0
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | pid: 14381
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | pgrp: 14381
[2025-10-12 20:47:46] 2025-10-12 18:46:44,802 | INFO     | corecount: 8
[2025-10-12 20:47:46] 2025-10-12 18:46:44,803 | INFO     | event service: False
[2025-10-12 20:47:46] 2025-10-12 18:46:44,803 | INFO     | sizes: {0: 2348029, 1: 2348715, 2: 2348914, 13: 2348914, 23: 2348970, 34: 2348998, 45: 2349154, 56: 2349182, 66: 2349210, 77: 2349238, 88: 2349294, 98: 2349892, 13
[2025-10-12 20:47:46] 2025-10-12 18:46:44,803 | INFO     | --------------------------------------------------
[2025-10-12 20:47:46] 2025-10-12 18:46:44,803 | INFO     | 
[2025-10-12 20:47:46] 2025-10-12 18:46:44,803 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-10-12 20:47:46] 2025-10-12 18:46:44,809 | INFO     | time since job start (13287s) is within the limit (172800.0s)
[2025-10-12 20:47:46] 2025-10-12 18:46:44,840 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,840 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,840 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,840 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,841 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,841 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,841 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,841 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,841 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,841 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,841 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,842 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,842 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,842 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:47:46] 2025-10-12 18:46:44,842 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,842 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:47:46] 2025-10-12 18:46:44,842 | INFO     | job 6839591572 has completed (purged errors)
[2025-10-12 20:47:46] 2025-10-12 18:46:44,842 | INFO     | overall cleanup function is called
[2025-10-12 20:47:46] 2025-10-12 18:46:45,849 | INFO     | --- collectZombieJob: --- 10, [14381]
[2025-10-12 20:47:46] 2025-10-12 18:46:45,849 | INFO     | zombie collector waiting for pid 14381
[2025-10-12 20:47:46] 2025-10-12 18:46:45,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:47:46] 2025-10-12 18:46:45,849 | INFO     | collected zombie processes
[2025-10-12 20:47:46] 2025-10-12 18:46:45,850 | INFO     | will attempt to kill all subprocesses of pid=14381
[2025-10-12 20:47:46] 2025-10-12 18:46:45,943 | INFO     | process IDs to be killed: [14381] (in reverse order)
[2025-10-12 20:47:46] 2025-10-12 18:46:46,010 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:47:46] 2025-10-12 18:46:46,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:47:46] 2025-10-12 18:46:46,014 | INFO     | did not find any defunct processes belonging to 14381
[2025-10-12 20:47:46] 2025-10-12 18:46:46,017 | INFO     | did not find any defunct processes belonging to 14381
[2025-10-12 20:47:46] 2025-10-12 18:46:46,017 | INFO     | ready for new job
[2025-10-12 20:47:46] 2025-10-12 18:46:46,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:47:46] 2025-10-12 18:46:46,019 | INFO     | ***************************************
[2025-10-12 20:47:46] 2025-10-12 18:46:46,019 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:47:46] 2025-10-12 18:46:46,019 | INFO     | ***************************************
[2025-10-12 20:47:46] 2025-10-12 18:46:46,019 | INFO     | 
[2025-10-12 20:47:46] 2025-10-12 18:46:46,020 | INFO     | pilot is running in a VM
[2025-10-12 20:47:46] 2025-10-12 18:46:46,020 | INFO     | architecture information:
[2025-10-12 20:47:46] 2025-10-12 18:46:46,021 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:47:46] 2025-10-12 18:46:46,045 | INFO     | cat /etc/os-release:
[2025-10-12 20:47:46] NAME="CentOS Linux"
[2025-10-12 20:47:46] VERSION="7 (Core)"
[2025-10-12 20:47:46] ID="centos"
[2025-10-12 20:47:46] ID_LIKE="rhel fedora"
[2025-10-12 20:47:46] VERSION_ID="7"
[2025-10-12 20:47:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:47:46] ANSI_COLOR="0;31"
[2025-10-12 20:47:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:47:46] HOME_URL="https://www.centos.org/"
[2025-10-12 20:47:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:47:46] 
[2025-10-12 20:47:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:47:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:47:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:47:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:47:46] 
[2025-10-12 20:47:46] 2025-10-12 18:46:46,046 | INFO     | ***************************************
[2025-10-12 20:47:46] 2025-10-12 18:46:46,549 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-10-12 20:47:46] 2025-10-12 18:46:46,583 | INFO     | sufficient remaining disk space (496737714176 B)
[2025-10-12 20:47:46] 2025-10-12 18:46:46,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:47:46] 2025-10-12 18:46:46,584 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:47:46] 2025-10-12 18:46:46,584 | INFO     | update_server=False
[2025-10-12 20:47:46] 2025-10-12 18:46:46,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:47:46] 2025-10-12 18:46:46,585 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 20:47:46] 2025-10-12 18:46:46,585 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:47:46] 2025-10-12 18:46:46,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:47:46] 2025-10-12 18:46:46,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:47:46] 2025-10-12 18:46:46,784 | INFO     | all payload control threads have been joined
[2025-10-12 20:47:46] 2025-10-12 18:46:46,987 | INFO     | all job control threads have been joined
[2025-10-12 20:47:46] 2025-10-12 18:46:47,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:47:46] 2025-10-12 18:46:47,286 | INFO     | all data control threads have been joined
[2025-10-12 20:47:46] 2025-10-12 18:46:47,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:47:46] 2025-10-12 18:46:47,432 | INFO     | aborting loop
[2025-10-12 20:47:46] 2025-10-12 18:46:47,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:47:46] 2025-10-12 18:46:47,600 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:47,711 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:47,787 | INFO     | [payload] control thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:47,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:47,993 | INFO     | [job] control thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:48,221 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:48,288 | INFO     | [job] validate thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:48,288 | INFO     | [data] control thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:48,439 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:48,481 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:48,644 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:48,988 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:49,126 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:49,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:47:46] 2025-10-12 18:46:49,606 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:50,490 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:46:51,224 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:47:46] 2025-10-12 18:47:39,730 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:47:46] 2025-10-12 18:47:40,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140065660372800)>', '<ExcThread(monitor, started 140065208506112)>']
[2025-10-12 20:47:46] 2025-10-12 18:47:40,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:47:46] 2025-10-12 18:47:40,824 | INFO     | [monitor] control thread has ended
[2025-10-12 20:47:46] 2025-10-12 18:47:45,703 | INFO     | all workflow threads have been joined
[2025-10-12 20:47:46] 2025-10-12 18:47:45,703 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:47:46] 2025-10-12 18:47:45,703 | INFO     | traces error code: 0
[2025-10-12 20:47:46] 2025-10-12 18:47:45,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:47:46] 2025-10-12 18:47:45,909 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:47:46] 2025-10-12 18:47:45,914 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:47:46] 2025-10-12 18:47:45,917 [wrapper] pilotpid: 7858
[2025-10-12 20:47:46] 2025-10-12 18:47:45,921 [wrapper] Pilot exit status: 0
[2025-10-12 20:47:46] 2025-10-12 18:47:45,942 [wrapper] pandaids: 6839591572
[2025-10-12 20:47:46] 2025-10-12 18:47:45,981 [wrapper] cleanup supervisor_pilot  6199 7859
[2025-10-12 20:47:46] 2025-10-12 18:47:45,989 [wrapper] Test setup, not cleaning
[2025-10-12 20:47:46] 2025-10-12 18:47:45,992 [wrapper] apfmon messages muted
[2025-10-12 20:47:46] 2025-10-12 18:47:45,995 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:47:46] 2025-10-12 18:47:45,998 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:47:46]  *** Error codes and diagnostics ***
[2025-10-12 20:47:46]     "exeErrorCode": 0,
[2025-10-12 20:47:46]     "exeErrorDiag": "",
[2025-10-12 20:47:46]     "pilotErrorCode": 0,
[2025-10-12 20:47:46]     "pilotErrorDiag": "",
[2025-10-12 20:47:46]  *** Listing of results directory ***
[2025-10-12 20:47:46] total 408464
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:14 pilot3.tar.gz
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc      5112 Oct 12 08:35 queuedata.json
[2025-10-12 20:47:46] -rwx------. 1 boinc boinc     36292 Oct 12 08:36 runpilot2-wrapper.sh
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc       100 Oct 12 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:47:46] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 17:01 run_atlas
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc       105 Oct 12 17:01 job.xml
[2025-10-12 20:47:46] -rw-r--r--. 2 boinc boinc 221011038 Oct 12 17:01 EVNT.46676267._004516.pool.root.1
[2025-10-12 20:47:46] -rw-r--r--. 2 boinc boinc    569681 Oct 12 17:01 input.tar.gz
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc      6391 Oct 12 17:01 init_data.xml
[2025-10-12 20:47:46] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:01 start_atlas.sh
[2025-10-12 20:47:46] drwxrwx--x. 2 boinc boinc        68 Oct 12 17:01 shared
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc         0 Oct 12 17:01 boinc_lockfile
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc      2550 Oct 12 17:01 pandaJob.out
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc    975528 Oct 12 17:05 agis_schedconf.cvmfs.json
[2025-10-12 20:47:46] drwx------. 5 boinc boinc      4096 Oct 12 17:05 pilot3
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc 188926377 Oct 12 20:45 HITS.46676269._072836.pool.root.1
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc        95 Oct 12 20:46 pilot_heartbeat.json
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc       530 Oct 12 20:46 boinc_task_state.xml
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc      1017 Oct 12 20:46 memory_monitor_summary.json
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc   1560580 Oct 12 20:46 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc    449529 Oct 12 20:46 log.46676269._072836.job.log.tgz.1
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc      7787 Oct 12 20:46 heartbeat.json
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc      8192 Oct 12 20:47 boinc_mmap_file
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc        28 Oct 12 20:47 wrapper_checkpoint.txt
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc      4616 Oct 12 20:47 pilotlog.txt
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc   1779581 Oct 12 20:47 log.46676269._072836.job.log.1
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc       357 Oct 12 20:47 output.list
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc       620 Oct 12 20:47 runtime_log
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc   2252800 Oct 12 20:47 result.tar.gz
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc      8717 Oct 12 20:47 runtime_log.err
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc       657 Oct 12 20:47 4UaNDmzr4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRtiNDmeQ9EVn.diag
[2025-10-12 20:47:46] -rw-r--r--. 1 boinc boinc      1839 Oct 12 20:47 stderr.txt
[2025-10-12 20:47:46] HITS file was successfully produced:
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc 188926377 Oct 12 20:45 shared/HITS.pool.root.1
[2025-10-12 20:47:46]  *** Contents of shared directory: ***
[2025-10-12 20:47:46] total 403108
[2025-10-12 20:47:46] -rw-r--r--. 2 boinc boinc 221011038 Oct 12 17:01 ATLAS.root_0
[2025-10-12 20:47:46] -rw-r--r--. 2 boinc boinc    569681 Oct 12 17:01 input.tar.gz
[2025-10-12 20:47:46] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:01 start_atlas.sh
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc 188926377 Oct 12 20:45 HITS.pool.root.1
[2025-10-12 20:47:46] -rw-------. 1 boinc boinc   2252800 Oct 12 20:47 result.tar.gz
20:47:47 (4040): run_atlas exited; CPU time 48647.895307
20:47:47 (4040): called boinc_finish(0)

</stderr_txt>
]]>

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