Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:20:55 (595): wrapper (7.7.26015): starting
07:20:55 (595): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:20:55] Arguments: --nthreads 8
[2025-10-12 07:20:55] Threads: 8
[2025-10-12 07:20:55] Checking for CVMFS
[2025-10-12 07:20:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:20:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:20:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:20:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:20:56] 2.11.2.0 2876 850 65508 151619 3 56 13404726 20275200 1 130560 0 591746 99.988 31953 38175 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:20:56] CVMFS is ok
[2025-10-12 07:20:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:20:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:20:56] Further information can be found at the LHC@home message board.
[2025-10-12 07:20:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:20:56] Checking for apptainer binary...
[2025-10-12 07:20:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:20:56] Running /usr/bin/apptainer --version
[2025-10-12 07:20:56] apptainer version 1.3.2-1.el7
[2025-10-12 07:20:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:20:58] c-204-40.aglt2.org
[2025-10-12 07:20:58] apptainer works
[2025-10-12 07:20:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:20:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:20:58] Starting ATLAS job with PandaID=6839591227
[2025-10-12 07:20:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:23:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:23:33] 2025-10-12 13:22:30,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:23:33] 2025-10-12 13:22:31,509 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 09:23:33] 2025-10-12 13:22:31,513 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-12 09:23:33] 2025-10-12 13:22:31,515 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839591227/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:23:33] 2025-10-12 13:22:31,516 | INFO     | extracted standard info from prmon json
[2025-10-12 09:23:33] 2025-10-12 13:22:31,516 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:23:33] 2025-10-12 13:22:31,516 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:23:33] 2025-10-12 13:22:31,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:23:33] 2025-10-12 13:22:31,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:23:33] 2025-10-12 13:22:31,520 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:23:33] 2025-10-12 13:22:31,520 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 09:23:33] 2025-10-12 13:22:31,521 | INFO     | sum of deviations: -6359720309.999999
[2025-10-12 09:23:33] 2025-10-12 13:22:31,521 | INFO     | mean x: 1760271705.0
[2025-10-12 09:23:33] 2025-10-12 13:22:31,521 | INFO     | mean y: 2606136.1596638653
[2025-10-12 09:23:33] 2025-10-12 13:22:31,521 | INFO     | -- intersect: 21428013396.941196
[2025-10-12 09:23:33] 2025-10-12 13:22:31,521 | INFO     | intersect: 21428013396.941196
[2025-10-12 09:23:33] 2025-10-12 13:22:31,522 | INFO     | chi2: 1.5976774883223754
[2025-10-12 09:23:33] 2025-10-12 13:22:31,522 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 09:23:33] 2025-10-12 13:22:31,523 | INFO     | sum of deviations: -5030564195.499997
[2025-10-12 09:23:33] 2025-10-12 13:22:31,523 | INFO     | mean x: 1760271552.5
[2025-10-12 09:23:33] 2025-10-12 13:22:31,523 | INFO     | mean y: 2609348.5701754387
[2025-10-12 09:23:33] 2025-10-12 13:22:31,523 | INFO     | -- intersect: 19279492140.307903
[2025-10-12 09:23:33] 2025-10-12 13:22:31,523 | INFO     | intersect: 19279492140.307903
[2025-10-12 09:23:33] 2025-10-12 13:22:31,523 | INFO     | chi2: 1.599802685355278
[2025-10-12 09:23:33] 2025-10-12 13:22:31,523 | INFO     | current chi2=1.599802685355278 (change=-0.13301789932172942 %)
[2025-10-12 09:23:33] 2025-10-12 13:22:31,524 | INFO     | right removable region: 113
[2025-10-12 09:23:33] 2025-10-12 13:22:31,524 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 09:23:33] 2025-10-12 13:22:31,525 | INFO     | sum of deviations: -24870913076.500004
[2025-10-12 09:23:33] 2025-10-12 13:22:31,525 | INFO     | mean x: 1760271857.5
[2025-10-12 09:23:33] 2025-10-12 13:22:31,525 | INFO     | mean y: 2650019.236842105
[2025-10-12 09:23:33] 2025-10-12 13:22:31,525 | INFO     | -- intersect: 95306822819.36064
[2025-10-12 09:23:33] 2025-10-12 13:22:31,525 | INFO     | intersect: 95306822819.36064
[2025-10-12 09:23:33] 2025-10-12 13:22:31,525 | INFO     | chi2: 0.1029842403567419
[2025-10-12 09:23:33] 2025-10-12 13:22:31,525 | INFO     | current chi2=0.1029842403567419 (change=93.55412834508425 %)
[2025-10-12 09:23:33] 2025-10-12 13:22:31,526 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 09:23:33] 2025-10-12 13:22:31,526 | INFO     | sum of deviations: -23669955355.000004
[2025-10-12 09:23:33] 2025-10-12 13:22:31,526 | INFO     | mean x: 1760272010.0
[2025-10-12 09:23:33] 2025-10-12 13:22:31,526 | INFO     | mean y: 2646797.018348624
[2025-10-12 09:23:33] 2025-10-12 13:22:31,527 | INFO     | -- intersect: 103768834071.97588
[2025-10-12 09:23:33] 2025-10-12 13:22:31,527 | INFO     | intersect: 103768834071.97588
[2025-10-12 09:23:33] 2025-10-12 13:22:31,527 | INFO     | chi2: 0.09183329634157719
[2025-10-12 09:23:33] 2025-10-12 13:22:31,527 | INFO     | current chi2=0.09183329634157719 (change=10.82781596148824 %)
[2025-10-12 09:23:33] 2025-10-12 13:22:31,527 | INFO     | left removable region: 20
[2025-10-12 09:23:33] 2025-10-12 13:22:31,527 | INFO     | sum of square deviations: 249388862.0
[2025-10-12 09:23:33] 2025-10-12 13:22:31,528 | INFO     | sum of deviations: -17219743009.0
[2025-10-12 09:23:33] 2025-10-12 13:22:31,528 | INFO     | mean x: 1760272132.0
[2025-10-12 09:23:33] 2025-10-12 13:22:31,528 | INFO     | mean y: 2639091.9032258065
[2025-10-12 09:23:33] 2025-10-12 13:22:31,528 | INFO     | -- intersect: 121545491871.52948
[2025-10-12 09:23:33] 2025-10-12 13:22:31,528 | INFO     | intersect: 121545491871.52948
[2025-10-12 09:23:33] 2025-10-12 13:22:31,529 | INFO     | chi2: 0.08180121052580311
[2025-10-12 09:23:33] 2025-10-12 13:22:31,529 | INFO     | -- intersect: 121545491871.52948
[2025-10-12 09:23:33] 2025-10-12 13:22:31,529 | INFO     | current memory leak: -69.05 B/s (using 93 data points, chi2=0.08)
[2025-10-12 09:23:33] 2025-10-12 13:22:31,529 | INFO     | could have reported an average CPU frequency of 1950 MHz (7 samples)
[2025-10-12 09:23:33] 2025-10-12 13:22:31,530 | INFO     | ..............................
[2025-10-12 09:23:33] 2025-10-12 13:22:31,530 | INFO     | . Timing measurements:
[2025-10-12 09:23:33] 2025-10-12 13:22:31,530 | INFO     | . get job = 0 s
[2025-10-12 09:23:33] 2025-10-12 13:22:31,530 | INFO     | . initial setup = 2 s
[2025-10-12 09:23:33] 2025-10-12 13:22:31,530 | INFO     | . payload setup = 8 s
[2025-10-12 09:23:33] 2025-10-12 13:22:31,530 | INFO     | . stage-in = 0 s
[2025-10-12 09:23:33] 2025-10-12 13:22:31,530 | INFO     | . payload execution = 7238 s
[2025-10-12 09:23:33] 2025-10-12 13:22:31,530 | INFO     | . stage-out = 0 s
[2025-10-12 09:23:33] 2025-10-12 13:22:31,530 | INFO     | . log creation = 0 s
[2025-10-12 09:23:33] 2025-10-12 13:22:31,531 | INFO     | ..............................
[2025-10-12 09:23:33] 2025-10-12 13:22:31,556 | INFO     | time since job start (7276s) is within the limit (172800.0s)
[2025-10-12 09:23:33] 2025-10-12 13:22:32,026 | INFO     | 
[2025-10-12 09:23:33] 2025-10-12 13:22:32,027 | INFO     | job summary report
[2025-10-12 09:23:33] 2025-10-12 13:22:32,027 | INFO     | --------------------------------------------------
[2025-10-12 09:23:33] 2025-10-12 13:22:32,027 | INFO     | PanDA job id: 6839591227
[2025-10-12 09:23:33] 2025-10-12 13:22:32,027 | INFO     | task id: 46676269
[2025-10-12 09:23:33] 2025-10-12 13:22:32,027 | INFO     | errors: (none)
[2025-10-12 09:23:33] 2025-10-12 13:22:32,028 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:23:33] 2025-10-12 13:22:32,028 | INFO     | pilot state: finished 
[2025-10-12 09:23:33] 2025-10-12 13:22:32,028 | INFO     | transexitcode: 0
[2025-10-12 09:23:33] 2025-10-12 13:22:32,028 | INFO     | exeerrorcode: 0
[2025-10-12 09:23:33] 2025-10-12 13:22:32,028 | INFO     | exeerrordiag: 
[2025-10-12 09:23:33] 2025-10-12 13:22:32,028 | INFO     | exitcode: 0
[2025-10-12 09:23:33] 2025-10-12 13:22:32,029 | INFO     | exitmsg: OK
[2025-10-12 09:23:33] 2025-10-12 13:22:32,029 | INFO     | cpuconsumptiontime: 53526 s
[2025-10-12 09:23:33] 2025-10-12 13:22:32,029 | INFO     | nevents: 400
[2025-10-12 09:23:33] 2025-10-12 13:22:32,029 | INFO     | neventsw: 0
[2025-10-12 09:23:33] 2025-10-12 13:22:32,029 | INFO     | pid: 10876
[2025-10-12 09:23:33] 2025-10-12 13:22:32,030 | INFO     | pgrp: 10876
[2025-10-12 09:23:33] 2025-10-12 13:22:32,030 | INFO     | corecount: 8
[2025-10-12 09:23:33] 2025-10-12 13:22:32,030 | INFO     | event service: False
[2025-10-12 09:23:33] 2025-10-12 13:22:32,030 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7249: 2376429, 7250: 2385427, 7251: 2385483, 7259: 2385805}
[2025-10-12 09:23:33] 2025-10-12 13:22:32,030 | INFO     | --------------------------------------------------
[2025-10-12 09:23:33] 2025-10-12 13:22:32,030 | INFO     | 
[2025-10-12 09:23:33] 2025-10-12 13:22:32,031 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:23:33] 2025-10-12 13:22:32,060 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,061 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,061 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,061 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,062 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,062 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,064 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:23:33] 2025-10-12 13:22:32,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,064 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:23:33] 2025-10-12 13:22:32,064 | INFO     | job 6839591227 has completed (purged errors)
[2025-10-12 09:23:33] 2025-10-12 13:22:32,065 | INFO     | overall cleanup function is called
[2025-10-12 09:23:33] 2025-10-12 13:22:32,677 | INFO     | PID=4461 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 09:23:33] 2025-10-12 13:22:33,073 | INFO     | --- collectZombieJob: --- 10, [10876]
[2025-10-12 09:23:33] 2025-10-12 13:22:33,073 | INFO     | zombie collector waiting for pid 10876
[2025-10-12 09:23:33] 2025-10-12 13:22:33,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:23:33] 2025-10-12 13:22:33,073 | INFO     | collected zombie processes
[2025-10-12 09:23:33] 2025-10-12 13:22:33,073 | INFO     | will attempt to kill all subprocesses of pid=10876
[2025-10-12 09:23:33] 2025-10-12 13:22:33,161 | INFO     | process IDs to be killed: [10876] (in reverse order)
[2025-10-12 09:23:33] 2025-10-12 13:22:33,221 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:23:33] 2025-10-12 13:22:33,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:23:33] 2025-10-12 13:22:33,225 | INFO     | did not find any defunct processes belonging to 10876
[2025-10-12 09:23:33] 2025-10-12 13:22:33,228 | INFO     | did not find any defunct processes belonging to 10876
[2025-10-12 09:23:33] 2025-10-12 13:22:33,228 | INFO     | ready for new job
[2025-10-12 09:23:33] 2025-10-12 13:22:33,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:23:33] 2025-10-12 13:22:33,230 | INFO     | ***************************************
[2025-10-12 09:23:33] 2025-10-12 13:22:33,230 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:23:33] 2025-10-12 13:22:33,230 | INFO     | ***************************************
[2025-10-12 09:23:33] 2025-10-12 13:22:33,231 | INFO     | 
[2025-10-12 09:23:33] 2025-10-12 13:22:33,231 | INFO     | architecture information:
[2025-10-12 09:23:33] 2025-10-12 13:22:33,232 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:23:33] 2025-10-12 13:22:33,250 | INFO     | cat /etc/os-release:
[2025-10-12 09:23:33] NAME="CentOS Linux"
[2025-10-12 09:23:33] VERSION="7 (Core)"
[2025-10-12 09:23:33] ID="centos"
[2025-10-12 09:23:33] ID_LIKE="rhel fedora"
[2025-10-12 09:23:33] VERSION_ID="7"
[2025-10-12 09:23:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:23:33] ANSI_COLOR="0;31"
[2025-10-12 09:23:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:23:33] HOME_URL="https://www.centos.org/"
[2025-10-12 09:23:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:23:33] 
[2025-10-12 09:23:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:23:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:23:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:23:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:23:33] 
[2025-10-12 09:23:33] 2025-10-12 13:22:33,251 | INFO     | ***************************************
[2025-10-12 09:23:33] 2025-10-12 13:22:33,754 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:23:33] 2025-10-12 13:22:33,775 | INFO     | sufficient remaining disk space (18559795200 B)
[2025-10-12 09:23:33] 2025-10-12 13:22:33,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:23:33] 2025-10-12 13:22:33,775 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:23:33] 2025-10-12 13:22:33,776 | INFO     | update_server=False
[2025-10-12 09:23:33] 2025-10-12 13:22:33,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:23:33] 2025-10-12 13:22:33,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:23:33] 2025-10-12 13:22:33,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:23:33] 2025-10-12 13:22:33,777 | INFO     | aborting loop
[2025-10-12 09:23:33] 2025-10-12 13:22:33,972 | INFO     | all payload control threads have been joined
[2025-10-12 09:23:33] 2025-10-12 13:22:34,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:23:33] 2025-10-12 13:22:34,086 | INFO     | all job control threads have been joined
[2025-10-12 09:23:33] 2025-10-12 13:22:34,173 | INFO     | all data control threads have been joined
[2025-10-12 09:23:33] 2025-10-12 13:22:34,782 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:34,783 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:34,923 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:34,978 | INFO     | [payload] control thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:35,090 | INFO     | [job] control thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:35,134 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:35,179 | INFO     | [data] control thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:35,376 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:35,642 | INFO     | [job] validate thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:35,783 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:35,962 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:36,045 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:36,055 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:36,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:23:33] 2025-10-12 13:22:37,650 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:38,069 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:22:44,562 | INFO     | job.realtimelogging is not enabled
[2025-10-12 09:23:33] 2025-10-12 13:22:45,567 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:23:33] 2025-10-12 13:23:04,880 | INFO     | PID=4461 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 09:23:33] 2025-10-12 13:23:04,881 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:23:33] 2025-10-12 13:23:04,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:23:33] 2025-10-12 13:23:04,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:23:33] 2025-10-12 13:23:26,731 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:23:33] 2025-10-12 13:23:28,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970420102976)>', '<ExcThread(monitor, started 139969611945728)>']
[2025-10-12 09:23:33] 2025-10-12 13:23:29,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:23:33] 2025-10-12 13:23:29,000 | INFO     | [monitor] control thread has ended
[2025-10-12 09:23:33] 2025-10-12 13:23:33,428 | INFO     | all workflow threads have been joined
[2025-10-12 09:23:33] 2025-10-12 13:23:33,428 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:23:33] 2025-10-12 13:23:33,429 | INFO     | traces error code: 0
[2025-10-12 09:23:33] 2025-10-12 13:23:33,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:23:33] 2025-10-12 13:23:33,545 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:23:33] 2025-10-12 13:23:33,550 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:23:33] 2025-10-12 13:23:33,554 [wrapper] pilotpid: 4461
[2025-10-12 09:23:33] 2025-10-12 13:23:33,560 [wrapper] Pilot exit status: 0
[2025-10-12 09:23:33] 2025-10-12 13:23:33,579 [wrapper] pandaids: 6839591227
[2025-10-12 09:23:33] 2025-10-12 13:23:33,633 [wrapper] cleanup supervisor_pilot 29151 4462
[2025-10-12 09:23:33] 2025-10-12 13:23:33,638 [wrapper] Test setup, not cleaning
[2025-10-12 09:23:33] 2025-10-12 13:23:33,643 [wrapper] apfmon messages muted
[2025-10-12 09:23:33] 2025-10-12 13:23:33,647 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:23:33] 2025-10-12 13:23:33,652 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:23:33]  *** Error codes and diagnostics ***
[2025-10-12 09:23:33]     "exeErrorCode": 0,
[2025-10-12 09:23:33]     "exeErrorDiag": "",
[2025-10-12 09:23:33]     "pilotErrorCode": 0,
[2025-10-12 09:23:33]     "pilotErrorDiag": "",
[2025-10-12 09:23:33]  *** Listing of results directory ***
[2025-10-12 09:23:33] total 411180
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:14 pilot3.tar.gz
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:28 queuedata.json
[2025-10-12 09:23:33] -rwx------ 1 boincer umatlas     36292 Oct 12 02:30 runpilot2-wrapper.sh
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas       100 Oct 12 07:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:23:33] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 07:20 run_atlas
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas       105 Oct 12 07:20 job.xml
[2025-10-12 09:23:33] -rw-r--r-- 2 boincer umatlas 218516818 Oct 12 07:20 EVNT.46676267._004509.pool.root.1
[2025-10-12 09:23:33] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:20 start_atlas.sh
[2025-10-12 09:23:33] drwxrwx--x 2 boincer umatlas      4096 Oct 12 07:20 shared
[2025-10-12 09:23:33] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 07:20 input.tar.gz
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas         0 Oct 12 07:20 boinc_lockfile
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 07:20 pandaJob.out
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas    975520 Oct 12 07:21 agis_schedconf.cvmfs.json
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas   1560580 Oct 12 07:21 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:23:33] drwx------ 5 boincer umatlas      4096 Oct 12 07:21 pilot3
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas 195848819 Oct 12 09:21 HITS.46676269._072659.pool.root.1
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas       529 Oct 12 09:21 boinc_task_state.xml
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas      1050 Oct 12 09:22 memory_monitor_summary.json
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas    366129 Oct 12 09:22 log.46676269._072659.job.log.tgz.1
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 09:22 init_data.xml
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas      7849 Oct 12 09:22 heartbeat.json
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas        95 Oct 12 09:23 pilot_heartbeat.json
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 09:23 boinc_mmap_file
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas        27 Oct 12 09:23 wrapper_checkpoint.txt
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas      4817 Oct 12 09:23 pilotlog.txt
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas   1022954 Oct 12 09:23 log.46676269._072659.job.log.1
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas       357 Oct 12 09:23 output.list
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas       620 Oct 12 09:23 runtime_log
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas   1413120 Oct 12 09:23 result.tar.gz
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 09:23 runtime_log.err
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas       659 Oct 12 09:23 arsMDmxl4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7qiNDmiT5IVn.diag
[2025-10-12 09:23:33] -rw-r--r-- 1 boincer umatlas     21169 Oct 12 09:23 stderr.txt
[2025-10-12 09:23:33] HITS file was successfully produced:
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas 195848819 Oct 12 09:21 shared/HITS.pool.root.1
[2025-10-12 09:23:33]  *** Contents of shared directory: ***
[2025-10-12 09:23:33] total 406616
[2025-10-12 09:23:33] -rw-r--r-- 2 boincer umatlas 218516818 Oct 12 07:20 ATLAS.root_0
[2025-10-12 09:23:33] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:20 start_atlas.sh
[2025-10-12 09:23:33] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 07:20 input.tar.gz
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas 195848819 Oct 12 09:21 HITS.pool.root.1
[2025-10-12 09:23:33] -rw------- 1 boincer umatlas   1413120 Oct 12 09:23 result.tar.gz
09:23:35 (595): run_atlas exited; CPU time 53539.159742
09:23:35 (595): called boinc_finish(0)

</stderr_txt>
]]>

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