Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:09:09 (383649): wrapper (7.7.26015): starting
00:09:09 (383649): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 00:09:09] Arguments: --nthreads 4
[2025-10-13 00:09:09] Threads: 4
[2025-10-13 00:09:09] Checking for CVMFS
[2025-10-13 00:09:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:09:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:09:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:09:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:09:09] 2.9.2.0 4261 1070 84288 151639 0 56 33010076 36864001 0 130560 0 981948 99.993 39796 682 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 00:09:09] CVMFS is ok
[2025-10-13 00:09:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:09:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:09:09] Further information can be found at the LHC@home message board.
[2025-10-13 00:09:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:09:09] Checking for apptainer binary...
[2025-10-13 00:09:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:09:09] Running /usr/bin/apptainer --version
[2025-10-13 00:09:09] apptainer version 1.4.1-1.1
[2025-10-13 00:09:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:09:09] atlasA237
[2025-10-13 00:09:09] apptainer works
[2025-10-13 00:09:09] Set ATHENA_PROC_NUMBER=4
[2025-10-13 00:09:09] Set ATHENA_CORE_NUMBER=4
[2025-10-13 00:09:09] Starting ATLAS job with PandaID=6839590660
[2025-10-13 00:09:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:21:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:21:28] 2025-10-12 23:20:31,537 | INFO     | aborting loop
[2025-10-13 01:21:28] 2025-10-12 23:20:31,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:21:28] 2025-10-12 23:20:32,019 | INFO     | all job control threads have been joined
[2025-10-13 01:21:28] 2025-10-12 23:20:32,119 | INFO     | all data control threads have been joined
[2025-10-13 01:21:28] 2025-10-12 23:20:32,542 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:32,542 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:32,542 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:32,582 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:32,876 | INFO     | all payload control threads have been joined
[2025-10-13 01:21:28] 2025-10-12 23:20:33,025 | INFO     | [job] control thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:33,091 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:33,125 | INFO     | [data] control thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:33,416 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:33,561 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:33,680 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:33,692 | INFO     | [job] validate thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:33,777 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:33,825 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:33,882 | INFO     | [payload] control thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:33,955 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:20:34,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:21:28] 2025-10-12 23:20:38,348 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:21:28] 2025-10-12 23:21:01,692 | INFO     | PID=387460 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 01:21:28] 2025-10-12 23:21:01,692 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:21:28] 2025-10-12 23:21:01,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:21:28] 2025-10-12 23:21:01,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:21:28] 2025-10-12 23:21:22,277 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:21:28] 2025-10-12 23:21:22,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899948742464)>', '<ExcThread(monitor, started 139899013420800)>']
[2025-10-13 01:21:28] 2025-10-12 23:21:23,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:21:28] 2025-10-12 23:21:23,805 | INFO     | [monitor] control thread has ended
[2025-10-13 01:21:28] 2025-10-12 23:21:27,861 | INFO     | all workflow threads have been joined
[2025-10-13 01:21:28] 2025-10-12 23:21:27,861 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:21:28] 2025-10-12 23:21:27,861 | INFO     | traces error code: 0
[2025-10-13 01:21:28] 2025-10-12 23:21:27,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:21:28] 2025-10-12 23:21:27,931 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:21:28] 2025-10-12 23:21:27,934 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:21:28] 2025-10-12 23:21:27,938 [wrapper] pilotpid: 387460
[2025-10-13 01:21:28] 2025-10-12 23:21:27,942 [wrapper] Pilot exit status: 0
[2025-10-13 01:21:28] 2025-10-12 23:21:27,952 [wrapper] pandaids: 6839590660
[2025-10-13 01:21:28] 2025-10-12 23:21:27,974 [wrapper] cleanup supervisor_pilot  403858 387461
[2025-10-13 01:21:28] 2025-10-12 23:21:27,977 [wrapper] Test setup, not cleaning
[2025-10-13 01:21:28] 2025-10-12 23:21:27,981 [wrapper] apfmon messages muted
[2025-10-13 01:21:28] 2025-10-12 23:21:27,984 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:21:28] 2025-10-12 23:21:27,987 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:21:28]  *** Error codes and diagnostics ***
[2025-10-13 01:21:28]     "exeErrorCode": 0,
[2025-10-13 01:21:28]     "exeErrorDiag": "",
[2025-10-13 01:21:28]     "pilotErrorCode": 0,
[2025-10-13 01:21:28]     "pilotErrorDiag": "",
[2025-10-13 01:21:28]  *** Listing of results directory ***
[2025-10-13 01:21:28] total 414376
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc    557409 Oct 12 07:26 pilot3.tar.gz
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc      5112 Oct 12 08:10 queuedata.json
[2025-10-13 01:21:28] -rwx------ 1 boinc boinc     36292 Oct 12 08:11 runpilot2-wrapper.sh
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc       100 Oct 13 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:21:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 00:09 run_atlas
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc       105 Oct 13 00:09 job.xml
[2025-10-13 01:21:28] -rw-r--r-- 2 boinc boinc 222375019 Oct 13 00:09 EVNT.46676267._004332.pool.root.1
[2025-10-13 01:21:28] -rw-r--r-- 2 boinc boinc    569680 Oct 13 00:09 input.tar.gz
[2025-10-13 01:21:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:09 start_atlas.sh
[2025-10-13 01:21:28] drwxrwx--x 2 boinc boinc      4096 Oct 13 00:09 shared
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:09 boinc_setup_complete
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc      6370 Oct 13 00:09 init_data.xml
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:09 boinc_lockfile
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc      2550 Oct 13 00:09 pandaJob.out
[2025-10-13 01:21:28] -rw------- 1 boinc boinc    975528 Oct 13 00:09 agis_schedconf.cvmfs.json
[2025-10-13 01:21:28] -rw------- 1 boinc boinc   1560580 Oct 13 00:09 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:21:28] drwx------ 5 boinc boinc      4096 Oct 13 00:09 pilot3
[2025-10-13 01:21:28] -rw------- 1 boinc boinc 196272148 Oct 13 01:20 HITS.46676269._072229.pool.root.1
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc       530 Oct 13 01:20 boinc_task_state.xml
[2025-10-13 01:21:28] -rw------- 1 boinc boinc      1022 Oct 13 01:20 memory_monitor_summary.json
[2025-10-13 01:21:28] -rw------- 1 boinc boinc    256846 Oct 13 01:20 log.46676269._072229.job.log.tgz.1
[2025-10-13 01:21:28] -rw------- 1 boinc boinc      7765 Oct 13 01:20 heartbeat.json
[2025-10-13 01:21:28] -rw------- 1 boinc boinc        95 Oct 13 01:21 pilot_heartbeat.json
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:21 boinc_mmap_file
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:21 wrapper_checkpoint.txt
[2025-10-13 01:21:28] -rw------- 1 boinc boinc      4751 Oct 13 01:21 pilotlog.txt
[2025-10-13 01:21:28] -rw------- 1 boinc boinc    634516 Oct 13 01:21 log.46676269._072229.job.log.1
[2025-10-13 01:21:28] -rw------- 1 boinc boinc       357 Oct 13 01:21 output.list
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:21 runtime_log
[2025-10-13 01:21:28] -rw------- 1 boinc boinc    911360 Oct 13 01:21 result.tar.gz
[2025-10-13 01:21:28] -rw------- 1 boinc boinc       661 Oct 13 01:21 vo3KDm2T4R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFKTMDmTG27Sn.diag
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc      8792 Oct 13 01:21 runtime_log.err
[2025-10-13 01:21:28] -rw-r--r-- 1 boinc boinc      6932 Oct 13 01:21 stderr.txt
[2025-10-13 01:21:28] HITS file was successfully produced:
[2025-10-13 01:21:28] -rw------- 1 boinc boinc 196272148 Oct 13 01:20 shared/HITS.pool.root.1
[2025-10-13 01:21:28]  *** Contents of shared directory: ***
[2025-10-13 01:21:28] total 410316
[2025-10-13 01:21:28] -rw-r--r-- 2 boinc boinc 222375019 Oct 13 00:09 ATLAS.root_0
[2025-10-13 01:21:28] -rw-r--r-- 2 boinc boinc    569680 Oct 13 00:09 input.tar.gz
[2025-10-13 01:21:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:09 start_atlas.sh
[2025-10-13 01:21:28] -rw------- 1 boinc boinc 196272148 Oct 13 01:20 HITS.pool.root.1
[2025-10-13 01:21:28] -rw------- 1 boinc boinc    911360 Oct 13 01:21 result.tar.gz
01:21:29 (383649): run_atlas exited; CPU time 16137.881824
01:21:29 (383649): called boinc_finish(0)

</stderr_txt>
]]>

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