Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:17:13 (1777): wrapper (7.7.26015): starting
07:17:13 (1777): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:17:13] Arguments: --nthreads 8
[2025-10-12 07:17:13] Threads: 8
[2025-10-12 07:17:13] Checking for CVMFS
[2025-10-12 07:17:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:17:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:17:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:17:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:17:14] 2.11.2.0 2790 5570 72704 151619 0 56 11925585 20275201 1 130560 0 3525402 99.989 194137 33768 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:17:14] CVMFS is ok
[2025-10-12 07:17:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:17:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:17:14] Further information can be found at the LHC@home message board.
[2025-10-12 07:17:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:17:14] Checking for apptainer binary...
[2025-10-12 07:17:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:17:14] Running /usr/bin/apptainer --version
[2025-10-12 07:17:14] apptainer version 1.3.2-1.el7
[2025-10-12 07:17:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:17:16] c-204-12.aglt2.org
[2025-10-12 07:17:16] apptainer works
[2025-10-12 07:17:16] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:17:16] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:17:16] Starting ATLAS job with PandaID=6839242558
[2025-10-12 07:17:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:22:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:22:52] 2025-10-12 13:21:54,426 | INFO     | time since job start (7461s) is within the limit (172800.0s)
[2025-10-12 09:22:52] 2025-10-12 13:21:56,435 | INFO     | time since job start (7463s) is within the limit (172800.0s)
[2025-10-12 09:22:52] 2025-10-12 13:21:56,834 | INFO     | monitor loop #555: job 0:6839242558 is in state 'finished'
[2025-10-12 09:22:52] 2025-10-12 13:21:56,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:22:52] 2025-10-12 13:21:57,776 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 09:22:52] 2025-10-12 13:21:57,780 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1795.5
[2025-10-12 09:22:52] 2025-10-12 13:21:57,783 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839242558/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:22:52] 2025-10-12 13:21:57,784 | INFO     | extracted standard info from prmon json
[2025-10-12 09:22:52] 2025-10-12 13:21:57,784 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:22:52] 2025-10-12 13:21:57,784 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:22:52] 2025-10-12 13:21:57,785 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:22:52] 2025-10-12 13:21:57,785 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:22:52] 2025-10-12 13:21:57,788 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:22:52] 2025-10-12 13:21:57,788 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 09:22:52] 2025-10-12 13:21:57,789 | INFO     | sum of deviations: -6029237834.49999
[2025-10-12 09:22:52] 2025-10-12 13:21:57,789 | INFO     | mean x: 1760271574.5
[2025-10-12 09:22:52] 2025-10-12 13:21:57,789 | INFO     | mean y: 2599552.893442623
[2025-10-12 09:22:52] 2025-10-12 13:21:57,789 | INFO     | -- intersect: 18852686390.824722
[2025-10-12 09:22:52] 2025-10-12 13:21:57,790 | INFO     | intersect: 18852686390.824722
[2025-10-12 09:22:52] 2025-10-12 13:21:57,790 | INFO     | chi2: 1.6443394503353097
[2025-10-12 09:22:52] 2025-10-12 13:21:57,790 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,791 | INFO     | sum of deviations: -4731462682.0000105
[2025-10-12 09:22:52] 2025-10-12 13:21:57,791 | INFO     | mean x: 1760271422.0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,791 | INFO     | mean y: 2602533.871794872
[2025-10-12 09:22:52] 2025-10-12 13:21:57,791 | INFO     | -- intersect: 16774058839.903887
[2025-10-12 09:22:52] 2025-10-12 13:21:57,791 | INFO     | intersect: 16774058839.903887
[2025-10-12 09:22:52] 2025-10-12 13:21:57,792 | INFO     | chi2: 1.6464805161645355
[2025-10-12 09:22:52] 2025-10-12 13:21:57,792 | INFO     | current chi2=1.6464805161645355 (change=-0.1302082625816218 %)
[2025-10-12 09:22:52] 2025-10-12 13:21:57,792 | INFO     | right removable region: 116
[2025-10-12 09:22:52] 2025-10-12 13:21:57,792 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,793 | INFO     | sum of deviations: -25246654563.0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,793 | INFO     | mean x: 1760271727.0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,793 | INFO     | mean y: 2642878.264957265
[2025-10-12 09:22:52] 2025-10-12 13:21:57,793 | INFO     | -- intersect: 89493623934.43437
[2025-10-12 09:22:52] 2025-10-12 13:21:57,793 | INFO     | intersect: 89493623934.43437
[2025-10-12 09:22:52] 2025-10-12 13:21:57,793 | INFO     | chi2: 0.12696262328778077
[2025-10-12 09:22:52] 2025-10-12 13:21:57,793 | INFO     | current chi2=0.12696262328778077 (change=92.278806954252 %)
[2025-10-12 09:22:52] 2025-10-12 13:21:57,794 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,794 | INFO     | sum of deviations: -25133993754.5
[2025-10-12 09:22:52] 2025-10-12 13:21:57,794 | INFO     | mean x: 1760271879.5
[2025-10-12 09:22:52] 2025-10-12 13:21:57,794 | INFO     | mean y: 2642482.776785714
[2025-10-12 09:22:52] 2025-10-12 13:21:57,795 | INFO     | -- intersect: 101567481631.92276
[2025-10-12 09:22:52] 2025-10-12 13:21:57,795 | INFO     | intersect: 101567481631.92276
[2025-10-12 09:22:52] 2025-10-12 13:21:57,795 | INFO     | chi2: 0.09708260379549553
[2025-10-12 09:22:52] 2025-10-12 13:21:57,795 | INFO     | current chi2=0.09708260379549553 (change=23.534500720387186 %)
[2025-10-12 09:22:52] 2025-10-12 13:21:57,795 | INFO     | left removable region: 20
[2025-10-12 09:22:52] 2025-10-12 13:21:57,796 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,796 | INFO     | sum of deviations: -18531939720.5
[2025-10-12 09:22:52] 2025-10-12 13:21:57,796 | INFO     | mean x: 1760272001.5
[2025-10-12 09:22:52] 2025-10-12 13:21:57,796 | INFO     | mean y: 2634949.3229166665
[2025-10-12 09:22:52] 2025-10-12 13:21:57,796 | INFO     | -- intersect: 118922843883.15306
[2025-10-12 09:22:52] 2025-10-12 13:21:57,797 | INFO     | intersect: 118922843883.15306
[2025-10-12 09:22:52] 2025-10-12 13:21:57,797 | INFO     | chi2: 0.08616619866879402
[2025-10-12 09:22:52] 2025-10-12 13:21:57,797 | INFO     | -- intersect: 118922843883.15306
[2025-10-12 09:22:52] 2025-10-12 13:21:57,797 | INFO     | current memory leak: -67.56 B/s (using 96 data points, chi2=0.09)
[2025-10-12 09:22:52] 2025-10-12 13:21:57,797 | INFO     | could have reported an average CPU frequency of 1949 MHz (8 samples)
[2025-10-12 09:22:52] 2025-10-12 13:21:57,798 | INFO     | ..............................
[2025-10-12 09:22:52] 2025-10-12 13:21:57,798 | INFO     | . Timing measurements:
[2025-10-12 09:22:52] 2025-10-12 13:21:57,798 | INFO     | . get job = 0 s
[2025-10-12 09:22:52] 2025-10-12 13:21:57,798 | INFO     | . initial setup = 2 s
[2025-10-12 09:22:52] 2025-10-12 13:21:57,798 | INFO     | . payload setup = 8 s
[2025-10-12 09:22:52] 2025-10-12 13:21:57,798 | INFO     | . stage-in = 0 s
[2025-10-12 09:22:52] 2025-10-12 13:21:57,799 | INFO     | . payload execution = 7425 s
[2025-10-12 09:22:52] 2025-10-12 13:21:57,799 | INFO     | . stage-out = 1 s
[2025-10-12 09:22:52] 2025-10-12 13:21:57,799 | INFO     | . log creation = 0 s
[2025-10-12 09:22:52] 2025-10-12 13:21:57,799 | INFO     | ..............................
[2025-10-12 09:22:52] 2025-10-12 13:21:57,898 | INFO     | 
[2025-10-12 09:22:52] 2025-10-12 13:21:57,898 | INFO     | job summary report
[2025-10-12 09:22:52] 2025-10-12 13:21:57,899 | INFO     | --------------------------------------------------
[2025-10-12 09:22:52] 2025-10-12 13:21:57,899 | INFO     | PanDA job id: 6839242558
[2025-10-12 09:22:52] 2025-10-12 13:21:57,899 | INFO     | task id: 46676269
[2025-10-12 09:22:52] 2025-10-12 13:21:57,899 | INFO     | errors: (none)
[2025-10-12 09:22:52] 2025-10-12 13:21:57,899 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:22:52] 2025-10-12 13:21:57,899 | INFO     | pilot state: finished 
[2025-10-12 09:22:52] 2025-10-12 13:21:57,899 | INFO     | transexitcode: 0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,900 | INFO     | exeerrorcode: 0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,900 | INFO     | exeerrordiag: 
[2025-10-12 09:22:52] 2025-10-12 13:21:57,900 | INFO     | exitcode: 0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,900 | INFO     | exitmsg: OK
[2025-10-12 09:22:52] 2025-10-12 13:21:57,900 | INFO     | cpuconsumptiontime: 54787 s
[2025-10-12 09:22:52] 2025-10-12 13:21:57,900 | INFO     | nevents: 400
[2025-10-12 09:22:52] 2025-10-12 13:21:57,901 | INFO     | neventsw: 0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,901 | INFO     | pid: 12021
[2025-10-12 09:22:52] 2025-10-12 13:21:57,901 | INFO     | pgrp: 12021
[2025-10-12 09:22:52] 2025-10-12 13:21:57,901 | INFO     | corecount: 8
[2025-10-12 09:22:52] 2025-10-12 13:21:57,901 | INFO     | event service: False
[2025-10-12 09:22:52] 2025-10-12 13:21:57,901 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7436: 2376537, 7437: 2385535, 7440: 2385591, 7447: 2385913}
[2025-10-12 09:22:52] 2025-10-12 13:21:57,901 | INFO     | --------------------------------------------------
[2025-10-12 09:22:52] 2025-10-12 13:21:57,902 | INFO     | 
[2025-10-12 09:22:52] 2025-10-12 13:21:57,902 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:22:52] 2025-10-12 13:21:57,932 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,936 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:22:52] 2025-10-12 13:21:57,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:22:52] 2025-10-12 13:21:57,936 | INFO     | job 6839242558 has completed (purged errors)
[2025-10-12 09:22:52] 2025-10-12 13:21:57,937 | INFO     | overall cleanup function is called
[2025-10-12 09:22:52] 2025-10-12 13:21:58,942 | INFO     | --- collectZombieJob: --- 10, [12021]
[2025-10-12 09:22:52] 2025-10-12 13:21:58,943 | INFO     | zombie collector waiting for pid 12021
[2025-10-12 09:22:52] 2025-10-12 13:21:58,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:22:52] 2025-10-12 13:21:58,943 | INFO     | collected zombie processes
[2025-10-12 09:22:52] 2025-10-12 13:21:58,943 | INFO     | will attempt to kill all subprocesses of pid=12021
[2025-10-12 09:22:52] 2025-10-12 13:21:59,034 | INFO     | process IDs to be killed: [12021] (in reverse order)
[2025-10-12 09:22:52] 2025-10-12 13:21:59,090 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:22:52] 2025-10-12 13:21:59,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:22:52] 2025-10-12 13:21:59,095 | INFO     | did not find any defunct processes belonging to 12021
[2025-10-12 09:22:52] 2025-10-12 13:21:59,098 | INFO     | did not find any defunct processes belonging to 12021
[2025-10-12 09:22:52] 2025-10-12 13:21:59,099 | INFO     | ready for new job
[2025-10-12 09:22:52] 2025-10-12 13:21:59,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:22:52] 2025-10-12 13:21:59,101 | INFO     | ***************************************
[2025-10-12 09:22:52] 2025-10-12 13:21:59,101 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:22:52] 2025-10-12 13:21:59,101 | INFO     | ***************************************
[2025-10-12 09:22:52] 2025-10-12 13:21:59,101 | INFO     | 
[2025-10-12 09:22:52] 2025-10-12 13:21:59,102 | INFO     | architecture information:
[2025-10-12 09:22:52] 2025-10-12 13:21:59,103 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:22:52] 2025-10-12 13:21:59,123 | INFO     | cat /etc/os-release:
[2025-10-12 09:22:52] NAME="CentOS Linux"
[2025-10-12 09:22:52] VERSION="7 (Core)"
[2025-10-12 09:22:52] ID="centos"
[2025-10-12 09:22:52] ID_LIKE="rhel fedora"
[2025-10-12 09:22:52] VERSION_ID="7"
[2025-10-12 09:22:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:22:52] ANSI_COLOR="0;31"
[2025-10-12 09:22:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:22:52] HOME_URL="https://www.centos.org/"
[2025-10-12 09:22:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:22:52] 
[2025-10-12 09:22:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:22:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:22:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:22:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:22:52] 
[2025-10-12 09:22:52] 2025-10-12 13:21:59,123 | INFO     | ***************************************
[2025-10-12 09:22:52] 2025-10-12 13:21:59,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:22:52] 2025-10-12 13:21:59,648 | INFO     | sufficient remaining disk space (18576572416 B)
[2025-10-12 09:22:52] 2025-10-12 13:21:59,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:22:52] 2025-10-12 13:21:59,648 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:22:52] 2025-10-12 13:21:59,649 | INFO     | update_server=False
[2025-10-12 09:22:52] 2025-10-12 13:21:59,649 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:22:52] 2025-10-12 13:21:59,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:22:52] 2025-10-12 13:21:59,650 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:22:52] 2025-10-12 13:22:00,000 | INFO     | all data control threads have been joined
[2025-10-12 09:22:52] 2025-10-12 13:22:00,084 | INFO     | all job control threads have been joined
[2025-10-12 09:22:52] 2025-10-12 13:22:00,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:22:52] 2025-10-12 13:22:00,344 | INFO     | aborting loop
[2025-10-12 09:22:52] 2025-10-12 13:22:00,651 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:00,655 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:00,776 | INFO     | [job] validate thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:00,847 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:00,862 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:00,908 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:00,952 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:01,003 | INFO     | [data] control thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:01,009 | INFO     | all payload control threads have been joined
[2025-10-12 09:22:52] 2025-10-12 13:22:01,089 | INFO     | [job] control thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:01,347 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:01,516 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:01,532 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:01,656 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:01,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:01,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:22:52] 2025-10-12 13:22:02,014 | INFO     | [payload] control thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:05,749 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:22:52] 2025-10-12 13:22:29,632 | INFO     | PID=5662 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 09:22:52] 2025-10-12 13:22:29,633 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:22:52] 2025-10-12 13:22:29,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:22:52] 2025-10-12 13:22:29,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:22:52] 2025-10-12 13:22:45,057 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:22:52] 2025-10-12 13:22:46,786 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140573922105152)>', '<ExcThread(monitor, started 140573230999296)>']
[2025-10-12 09:22:52] 2025-10-12 13:22:47,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:22:52] 2025-10-12 13:22:47,714 | INFO     | [monitor] control thread has ended
[2025-10-12 09:22:52] 2025-10-12 13:22:51,812 | INFO     | all workflow threads have been joined
[2025-10-12 09:22:52] 2025-10-12 13:22:51,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:22:52] 2025-10-12 13:22:51,819 | INFO     | traces error code: 0
[2025-10-12 09:22:52] 2025-10-12 13:22:51,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:22:52] 2025-10-12 13:22:51,940 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:22:52] 2025-10-12 13:22:51,945 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:22:52] 2025-10-12 13:22:51,950 [wrapper] pilotpid: 5662
[2025-10-12 09:22:52] 2025-10-12 13:22:51,954 [wrapper] Pilot exit status: 0
[2025-10-12 09:22:52] 2025-10-12 13:22:51,974 [wrapper] pandaids: 6839242558
[2025-10-12 09:22:52] 2025-10-12 13:22:52,026 [wrapper] cleanup supervisor_pilot  6949 5663
[2025-10-12 09:22:52] 2025-10-12 13:22:52,031 [wrapper] Test setup, not cleaning
[2025-10-12 09:22:52] 2025-10-12 13:22:52,035 [wrapper] apfmon messages muted
[2025-10-12 09:22:52] 2025-10-12 13:22:52,039 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:22:52] 2025-10-12 13:22:52,044 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:22:52]  *** Error codes and diagnostics ***
[2025-10-12 09:22:52]     "exeErrorCode": 0,
[2025-10-12 09:22:52]     "exeErrorDiag": "",
[2025-10-12 09:22:52]     "pilotErrorCode": 0,
[2025-10-12 09:22:52]     "pilotErrorDiag": "",
[2025-10-12 09:22:52]  *** Listing of results directory ***
[2025-10-12 09:22:52] total 417688
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 21:53 pilot3.tar.gz
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 22:02 queuedata.json
[2025-10-12 09:22:52] -rwx------ 1 boincer umatlas     36292 Oct 11 22:02 runpilot2-wrapper.sh
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas       100 Oct 12 07:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:22:52] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 07:17 run_atlas
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas       105 Oct 12 07:17 job.xml
[2025-10-12 09:22:52] -rw-r--r-- 2 boincer umatlas 221964454 Oct 12 07:17 EVNT.46676267._003173.pool.root.1
[2025-10-12 09:22:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:17 start_atlas.sh
[2025-10-12 09:22:52] drwxrwx--x 2 boincer umatlas      4096 Oct 12 07:17 shared
[2025-10-12 09:22:52] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 07:17 input.tar.gz
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas         0 Oct 12 07:17 boinc_lockfile
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 07:17 pandaJob.out
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas    975520 Oct 12 07:17 agis_schedconf.cvmfs.json
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas   1560580 Oct 12 07:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:22:52] drwx------ 5 boincer umatlas      4096 Oct 12 07:17 pilot3
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 09:20 init_data.xml
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas 198976944 Oct 12 09:21 HITS.46676269._069093.pool.root.1
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas       529 Oct 12 09:21 boinc_task_state.xml
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas      1049 Oct 12 09:21 memory_monitor_summary.json
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas    378029 Oct 12 09:21 log.46676269._069093.job.log.tgz.1
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas      7853 Oct 12 09:21 heartbeat.json
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas        95 Oct 12 09:22 pilot_heartbeat.json
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 09:22 boinc_mmap_file
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas        27 Oct 12 09:22 wrapper_checkpoint.txt
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas      4745 Oct 12 09:22 pilotlog.txt
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas   1053983 Oct 12 09:22 log.46676269._069093.job.log.1
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas       357 Oct 12 09:22 output.list
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas       620 Oct 12 09:22 runtime_log
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas   1454080 Oct 12 09:22 result.tar.gz
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 09:22 runtime_log.err
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas       659 Oct 12 09:22 bmQKDm4a0R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2zSMDmDoICGm.diag
[2025-10-12 09:22:52] -rw-r--r-- 1 boincer umatlas     21083 Oct 12 09:22 stderr.txt
[2025-10-12 09:22:52] HITS file was successfully produced:
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas 198976944 Oct 12 09:21 shared/HITS.pool.root.1
[2025-10-12 09:22:52]  *** Contents of shared directory: ***
[2025-10-12 09:22:52] total 413080
[2025-10-12 09:22:52] -rw-r--r-- 2 boincer umatlas 221964454 Oct 12 07:17 ATLAS.root_0
[2025-10-12 09:22:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:17 start_atlas.sh
[2025-10-12 09:22:52] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 07:17 input.tar.gz
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas 198976944 Oct 12 09:21 HITS.pool.root.1
[2025-10-12 09:22:52] -rw------- 1 boincer umatlas   1454080 Oct 12 09:22 result.tar.gz
09:22:53 (1777): run_atlas exited; CPU time 54807.393495
09:22:53 (1777): called boinc_finish(0)

</stderr_txt>
]]>

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