Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:19:05 (22201): wrapper (7.7.26015): starting
13:19:05 (22201): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:19:05] Arguments: --nthreads 8
[2025-10-12 13:19:05] Threads: 8
[2025-10-12 13:19:05] Checking for CVMFS
[2025-10-12 13:19:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:19:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:19:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:19:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:19:12] 2.11.2.0 14372 220327 137140 151619 3 11 17521449 25165825 4632 130560 0 118288227 99.886 67559521 3338 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 13:19:12] CVMFS is ok
[2025-10-12 13:19:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:19:12] Checking for apptainer binary...
[2025-10-12 13:19:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:19:12] Running /usr/bin/apptainer --version
[2025-10-12 13:19:12] apptainer version 1.3.2-1.el7
[2025-10-12 13:19:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:19:16] cg-vwn440.simple-grid.lan
[2025-10-12 13:19:16] apptainer works
[2025-10-12 13:19:16] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:19:16] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:19:17] Starting ATLAS job with PandaID=6839590807
[2025-10-12 13:19:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:16:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:16:35] 2025-10-12 15:15:53,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:16:35] 2025-10-12 15:15:53,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:16:35] 2025-10-12 15:15:53,764 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:16:35] 2025-10-12 15:15:53,764 | INFO     | sum of square deviations: 3301699115.0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,773 | INFO     | sum of deviations: -17274691534.5
[2025-10-12 17:16:35] 2025-10-12 15:15:53,774 | INFO     | mean x: 1760275343.5
[2025-10-12 17:16:35] 2025-10-12 15:15:53,774 | INFO     | mean y: 2504000.9863636363
[2025-10-12 17:16:35] 2025-10-12 15:15:53,774 | INFO     | -- intersect: 9212372167.531433
[2025-10-12 17:16:35] 2025-10-12 15:15:53,774 | INFO     | intersect: 9212372167.531433
[2025-10-12 17:16:35] 2025-10-12 15:15:53,774 | INFO     | chi2: 2.8610888641936456
[2025-10-12 17:16:35] 2025-10-12 15:15:53,775 | INFO     | sum of square deviations: 3081657780.0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,776 | INFO     | sum of deviations: -2147459249.999966
[2025-10-12 17:16:35] 2025-10-12 15:15:53,777 | INFO     | mean x: 1760275191.0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,777 | INFO     | mean y: 2514299.3209302328
[2025-10-12 17:16:35] 2025-10-12 15:15:53,777 | INFO     | -- intersect: 1229165508.2875555
[2025-10-12 17:16:35] 2025-10-12 15:15:53,777 | INFO     | intersect: 1229165508.2875555
[2025-10-12 17:16:35] 2025-10-12 15:15:53,777 | INFO     | chi2: 2.1005135233854455
[2025-10-12 17:16:35] 2025-10-12 15:15:53,777 | INFO     | current chi2=2.1005135233854455 (change=26.58342249787326 %)
[2025-10-12 17:16:35] 2025-10-12 15:15:53,778 | INFO     | sum of square deviations: 2871616632.5
[2025-10-12 17:16:35] 2025-10-12 15:15:53,779 | INFO     | sum of deviations: -1893232966.0000007
[2025-10-12 17:16:35] 2025-10-12 15:15:53,779 | INFO     | mean x: 1760275038.5
[2025-10-12 17:16:35] 2025-10-12 15:15:53,780 | INFO     | mean y: 2514483.904761905
[2025-10-12 17:16:35] 2025-10-12 15:15:53,780 | INFO     | -- intersect: 1163049178.6818233
[2025-10-12 17:16:35] 2025-10-12 15:15:53,780 | INFO     | intersect: 1163049178.6818233
[2025-10-12 17:16:35] 2025-10-12 15:15:53,780 | INFO     | chi2: 2.1007540267624565
[2025-10-12 17:16:35] 2025-10-12 15:15:53,780 | INFO     | current chi2=2.1007540267624565 (change=-0.01144974190041663 %)
[2025-10-12 17:16:35] 2025-10-12 15:15:53,780 | INFO     | right removable region: 209
[2025-10-12 17:16:35] 2025-10-12 15:15:53,781 | INFO     | sum of square deviations: 3081657780.0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,783 | INFO     | sum of deviations: -59082420348.0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,783 | INFO     | mean x: 1760275496.0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,783 | INFO     | mean y: 2532741.2511627907
[2025-10-12 17:16:35] 2025-10-12 15:15:53,783 | INFO     | -- intersect: 33751035724.913483
[2025-10-12 17:16:35] 2025-10-12 15:15:53,783 | INFO     | intersect: 33751035724.913483
[2025-10-12 17:16:35] 2025-10-12 15:15:53,784 | INFO     | chi2: 1.0010442462555773
[2025-10-12 17:16:35] 2025-10-12 15:15:53,784 | INFO     | current chi2=1.0010442462555773 (change=65.01177370673153 %)
[2025-10-12 17:16:35] 2025-10-12 15:15:53,784 | INFO     | sum of square deviations: 2871616632.5
[2025-10-12 17:16:35] 2025-10-12 15:15:53,786 | INFO     | sum of deviations: -57442558201.99999
[2025-10-12 17:16:35] 2025-10-12 15:15:53,786 | INFO     | mean x: 1760275648.5
[2025-10-12 17:16:35] 2025-10-12 15:15:53,786 | INFO     | mean y: 2531512.4285714286
[2025-10-12 17:16:35] 2025-10-12 15:15:53,786 | INFO     | -- intersect: 35214312655.54554
[2025-10-12 17:16:35] 2025-10-12 15:15:53,786 | INFO     | intersect: 35214312655.54554
[2025-10-12 17:16:35] 2025-10-12 15:15:53,787 | INFO     | chi2: 0.985634915482402
[2025-10-12 17:16:35] 2025-10-12 15:15:53,787 | INFO     | current chi2=0.985634915482402 (change=1.5393256422794657 %)
[2025-10-12 17:16:35] 2025-10-12 15:15:53,787 | INFO     | left removable region: 20
[2025-10-12 17:16:35] 2025-10-12 15:15:53,787 | INFO     | sum of square deviations: 2093397390.0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,789 | INFO     | sum of deviations: -28731688141.0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,789 | INFO     | mean x: 1760275618.0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,789 | INFO     | mean y: 2533585.613756614
[2025-10-12 17:16:35] 2025-10-12 15:15:53,789 | INFO     | -- intersect: 24162155805.54117
[2025-10-12 17:16:35] 2025-10-12 15:15:53,789 | INFO     | intersect: 24162155805.54117
[2025-10-12 17:16:35] 2025-10-12 15:15:53,790 | INFO     | chi2: 0.17322231869971547
[2025-10-12 17:16:35] 2025-10-12 15:15:53,790 | INFO     | -- intersect: 24162155805.54117
[2025-10-12 17:16:35] 2025-10-12 15:15:53,790 | INFO     | current memory leak: -13.72 B/s (using 189 data points, chi2=0.17)
[2025-10-12 17:16:35] 2025-10-12 15:15:53,790 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 17:16:35] 2025-10-12 15:15:53,791 | INFO     | ..............................
[2025-10-12 17:16:35] 2025-10-12 15:15:53,791 | INFO     | . Timing measurements:
[2025-10-12 17:16:35] 2025-10-12 15:15:53,791 | INFO     | . get job = 0 s
[2025-10-12 17:16:35] 2025-10-12 15:15:53,791 | INFO     | . initial setup = 10 s
[2025-10-12 17:16:35] 2025-10-12 15:15:53,791 | INFO     | . payload setup = 140 s
[2025-10-12 17:16:35] 2025-10-12 15:15:53,791 | INFO     | . stage-in = 0 s
[2025-10-12 17:16:35] 2025-10-12 15:15:53,791 | INFO     | . payload execution = 13539 s
[2025-10-12 17:16:35] 2025-10-12 15:15:53,791 | INFO     | . stage-out = 3 s
[2025-10-12 17:16:35] 2025-10-12 15:15:53,791 | INFO     | . log creation = 1 s
[2025-10-12 17:16:35] 2025-10-12 15:15:53,791 | INFO     | ..............................
[2025-10-12 17:16:35] 2025-10-12 15:15:53,917 | INFO     | 
[2025-10-12 17:16:35] 2025-10-12 15:15:53,917 | INFO     | job summary report
[2025-10-12 17:16:35] 2025-10-12 15:15:53,918 | INFO     | --------------------------------------------------
[2025-10-12 17:16:35] 2025-10-12 15:15:53,918 | INFO     | PanDA job id: 6839590807
[2025-10-12 17:16:35] 2025-10-12 15:15:53,918 | INFO     | task id: 46676269
[2025-10-12 17:16:35] 2025-10-12 15:15:53,918 | INFO     | errors: (none)
[2025-10-12 17:16:35] 2025-10-12 15:15:53,918 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:16:35] 2025-10-12 15:15:53,918 | INFO     | pilot state: finished 
[2025-10-12 17:16:35] 2025-10-12 15:15:53,918 | INFO     | transexitcode: 0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,918 | INFO     | exeerrorcode: 0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,918 | INFO     | exeerrordiag: 
[2025-10-12 17:16:35] 2025-10-12 15:15:53,918 | INFO     | exitcode: 0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,918 | INFO     | exitmsg: OK
[2025-10-12 17:16:35] 2025-10-12 15:15:53,919 | INFO     | cpuconsumptiontime: 51188 s
[2025-10-12 17:16:35] 2025-10-12 15:15:53,919 | INFO     | nevents: 400
[2025-10-12 17:16:35] 2025-10-12 15:15:53,919 | INFO     | neventsw: 0
[2025-10-12 17:16:35] 2025-10-12 15:15:53,919 | INFO     | pid: 385
[2025-10-12 17:16:35] 2025-10-12 15:15:53,919 | INFO     | pgrp: 385
[2025-10-12 17:16:35] 2025-10-12 15:15:53,919 | INFO     | corecount: 8
[2025-10-12 17:16:35] 2025-10-12 15:15:53,919 | INFO     | event service: False
[2025-10-12 17:16:35] 2025-10-12 15:15:53,919 | INFO     | sizes: {0: 2348580, 1: 2348835, 2: 2348863, 12: 2348863, 23: 2348891, 34: 2348919, 45: 2349075, 55: 2349103, 66: 2349131, 77: 2349159, 88: 2349215, 90: 2349785, 98
[2025-10-12 17:16:35] 2025-10-12 15:15:53,919 | INFO     | --------------------------------------------------
[2025-10-12 17:16:35] 2025-10-12 15:15:53,919 | INFO     | 
[2025-10-12 17:16:35] 2025-10-12 15:15:53,920 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2025-10-12 17:16:35] 2025-10-12 15:15:54,166 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,166 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,166 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:16:35] 2025-10-12 15:15:54,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,168 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:16:35] 2025-10-12 15:15:54,168 | INFO     | job 6839590807 has completed (purged errors)
[2025-10-12 17:16:35] 2025-10-12 15:15:54,168 | INFO     | overall cleanup function is called
[2025-10-12 17:16:35] 2025-10-12 15:15:55,177 | INFO     | --- collectZombieJob: --- 10, [385]
[2025-10-12 17:16:35] 2025-10-12 15:15:55,177 | INFO     | zombie collector waiting for pid 385
[2025-10-12 17:16:35] 2025-10-12 15:15:55,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:16:35] 2025-10-12 15:15:55,178 | INFO     | collected zombie processes
[2025-10-12 17:16:35] 2025-10-12 15:15:55,178 | INFO     | will attempt to kill all subprocesses of pid=385
[2025-10-12 17:16:35] 2025-10-12 15:15:55,313 | INFO     | process IDs to be killed: [385] (in reverse order)
[2025-10-12 17:16:35] 2025-10-12 15:15:56,146 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:16:35] 2025-10-12 15:15:56,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:16:35] 2025-10-12 15:15:56,149 | INFO     | did not find any defunct processes belonging to 385
[2025-10-12 17:16:35] 2025-10-12 15:15:56,153 | INFO     | did not find any defunct processes belonging to 385
[2025-10-12 17:16:35] 2025-10-12 15:15:56,153 | INFO     | ready for new job
[2025-10-12 17:16:35] 2025-10-12 15:15:56,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:16:35] 2025-10-12 15:15:56,155 | INFO     | ***************************************
[2025-10-12 17:16:35] 2025-10-12 15:15:56,155 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:16:35] 2025-10-12 15:15:56,155 | INFO     | ***************************************
[2025-10-12 17:16:35] 2025-10-12 15:15:56,156 | INFO     | 
[2025-10-12 17:16:35] 2025-10-12 15:15:56,156 | INFO     | pilot is running in a VM
[2025-10-12 17:16:35] 2025-10-12 15:15:56,156 | INFO     | architecture information:
[2025-10-12 17:16:35] 2025-10-12 15:15:56,165 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:16:35] 2025-10-12 15:15:56,356 | INFO     | cat /etc/os-release:
[2025-10-12 17:16:35] NAME="CentOS Linux"
[2025-10-12 17:16:35] VERSION="7 (Core)"
[2025-10-12 17:16:35] ID="centos"
[2025-10-12 17:16:35] ID_LIKE="rhel fedora"
[2025-10-12 17:16:35] VERSION_ID="7"
[2025-10-12 17:16:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:16:35] ANSI_COLOR="0;31"
[2025-10-12 17:16:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:16:35] HOME_URL="https://www.centos.org/"
[2025-10-12 17:16:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:16:35] 
[2025-10-12 17:16:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:16:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:16:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:16:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:16:35] 
[2025-10-12 17:16:35] 2025-10-12 15:15:56,356 | INFO     | ***************************************
[2025-10-12 17:16:35] 2025-10-12 15:15:56,859 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2025-10-12 17:16:35] 2025-10-12 15:15:57,121 | INFO     | sufficient remaining disk space (495795044352 B)
[2025-10-12 17:16:35] 2025-10-12 15:15:57,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:16:35] 2025-10-12 15:15:57,122 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:16:35] 2025-10-12 15:15:57,122 | INFO     | update_server=False
[2025-10-12 17:16:35] 2025-10-12 15:15:57,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:16:35] 2025-10-12 15:15:57,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:16:35] 2025-10-12 15:15:57,123 | INFO     | aborting loop
[2025-10-12 17:16:35] 2025-10-12 15:15:57,441 | INFO     | all data control threads have been joined
[2025-10-12 17:16:35] 2025-10-12 15:15:57,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:16:35] 2025-10-12 15:15:58,073 | INFO     | all payload control threads have been joined
[2025-10-12 17:16:35] 2025-10-12 15:15:58,128 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:58,131 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:58,335 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:58,359 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:58,446 | INFO     | [data] control thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:58,478 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:58,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:58,796 | INFO     | all job control threads have been joined
[2025-10-12 17:16:35] 2025-10-12 15:15:58,931 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:16:35] 2025-10-12 15:15:58,975 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:59,051 | INFO     | [job] validate thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:59,078 | INFO     | [payload] control thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:59,254 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:16:35] 2025-10-12 15:15:59,347 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:59,352 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:59,802 | INFO     | [job] control thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:59,937 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:15:59,957 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:16:03,263 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:16:35] 2025-10-12 15:16:24,849 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:16:35] 2025-10-12 15:16:25,680 | INFO     | PID=26321 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:16:35] 2025-10-12 15:16:25,680 | INFO     | .. there are 9 such processes running
[2025-10-12 17:16:35] 2025-10-12 15:16:25,682 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:16:35] 2025-10-12 15:16:25,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:16:35] 2025-10-12 15:16:25,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:16:35] 2025-10-12 15:16:26,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019443345216)>', '<ExcThread(monitor, started 140018349766400)>']
[2025-10-12 17:16:35] 2025-10-12 15:16:26,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:16:35] 2025-10-12 15:16:26,688 | INFO     | [monitor] control thread has ended
[2025-10-12 17:16:35] 2025-10-12 15:16:31,296 | INFO     | all workflow threads have been joined
[2025-10-12 17:16:35] 2025-10-12 15:16:31,296 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:16:35] 2025-10-12 15:16:31,297 | INFO     | traces error code: 0
[2025-10-12 17:16:35] 2025-10-12 15:16:31,297 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:16:35] 2025-10-12 15:16:31,713 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:16:35] 2025-10-12 15:16:31,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:16:35] 2025-10-12 15:16:31,906 [wrapper] pilotpid: 26321
[2025-10-12 17:16:35] 2025-10-12 15:16:31,986 [wrapper] Pilot exit status: 0
[2025-10-12 17:16:35] 2025-10-12 15:16:32,444 [wrapper] pandaids: 6839590807
[2025-10-12 17:16:35] 2025-10-12 15:16:33,174 [wrapper] cleanup supervisor_pilot 22368 26322
[2025-10-12 17:16:35] 2025-10-12 15:16:33,218 [wrapper] Test setup, not cleaning
[2025-10-12 17:16:35] 2025-10-12 15:16:33,306 [wrapper] apfmon messages muted
[2025-10-12 17:16:35] 2025-10-12 15:16:33,396 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:16:35] 2025-10-12 15:16:33,451 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:16:35]  *** Error codes and diagnostics ***
[2025-10-12 17:16:35]     "exeErrorCode": 0,
[2025-10-12 17:16:35]     "exeErrorDiag": "",
[2025-10-12 17:16:35]     "pilotErrorCode": 0,
[2025-10-12 17:16:35]     "pilotErrorDiag": "",
[2025-10-12 17:16:35]  *** Listing of results directory ***
[2025-10-12 17:16:35] total 404580
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:14 pilot3.tar.gz
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc      5112 Oct 12 08:16 queuedata.json
[2025-10-12 17:16:35] -rwx------. 1 boinc boinc     36292 Oct 12 08:17 runpilot2-wrapper.sh
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc       100 Oct 12 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:16:35] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 13:19 run_atlas
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc       105 Oct 12 13:19 job.xml
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc      6392 Oct 12 13:19 init_data.xml
[2025-10-12 17:16:35] -rw-r--r--. 2 boinc boinc 219719287 Oct 12 13:19 EVNT.46676267._004344.pool.root.1
[2025-10-12 17:16:35] -rw-r--r--. 2 boinc boinc     15120 Oct 12 13:19 start_atlas.sh
[2025-10-12 17:16:35] drwxrwx--x. 2 boinc boinc        68 Oct 12 13:19 shared
[2025-10-12 17:16:35] -rw-r--r--. 2 boinc boinc    569682 Oct 12 13:19 input.tar.gz
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc         0 Oct 12 13:19 boinc_lockfile
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc      2549 Oct 12 13:19 pandaJob.out
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc    975520 Oct 12 13:22 agis_schedconf.cvmfs.json
[2025-10-12 17:16:35] drwx------. 5 boinc boinc      4096 Oct 12 13:23 pilot3
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc 186066807 Oct 12 17:12 HITS.46676269._072376.pool.root.1
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc       531 Oct 12 17:13 boinc_task_state.xml
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc      1020 Oct 12 17:14 memory_monitor_summary.json
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc   1560580 Oct 12 17:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc    445052 Oct 12 17:14 log.46676269._072376.job.log.tgz.1
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc      7780 Oct 12 17:15 heartbeat.json
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc        28 Oct 12 17:16 wrapper_checkpoint.txt
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc      8192 Oct 12 17:16 boinc_mmap_file
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc        95 Oct 12 17:16 pilot_heartbeat.json
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc      4885 Oct 12 17:16 pilotlog.txt
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc   1862402 Oct 12 17:16 log.46676269._072376.job.log.1
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc       357 Oct 12 17:16 output.list
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc       620 Oct 12 17:16 runtime_log
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc   2324480 Oct 12 17:16 result.tar.gz
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc      8717 Oct 12 17:16 runtime_log.err
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc       657 Oct 12 17:16 EH9MDmtZ4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQoiNDmJMriWn.diag
[2025-10-12 17:16:35] -rw-r--r--. 1 boinc boinc     20539 Oct 12 17:16 stderr.txt
[2025-10-12 17:16:35] HITS file was successfully produced:
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc 186066807 Oct 12 17:12 shared/HITS.pool.root.1
[2025-10-12 17:16:35]  *** Contents of shared directory: ***
[2025-10-12 17:16:35] total 399128
[2025-10-12 17:16:35] -rw-r--r--. 2 boinc boinc 219719287 Oct 12 13:19 ATLAS.root_0
[2025-10-12 17:16:35] -rw-r--r--. 2 boinc boinc     15120 Oct 12 13:19 start_atlas.sh
[2025-10-12 17:16:35] -rw-r--r--. 2 boinc boinc    569682 Oct 12 13:19 input.tar.gz
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc 186066807 Oct 12 17:12 HITS.pool.root.1
[2025-10-12 17:16:35] -rw-------. 1 boinc boinc   2324480 Oct 12 17:16 result.tar.gz
17:16:37 (22201): run_atlas exited; CPU time 51361.940105
17:16:37 (22201): called boinc_finish(0)

</stderr_txt>
]]>

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