Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:31:19 (3668048): wrapper (7.7.26015): starting
22:31:19 (3668048): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 22:31:19] Arguments: --nthreads 4
[2025-10-12 22:31:19] Threads: 4
[2025-10-12 22:31:19] Checking for CVMFS
[2025-10-12 22:31:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:31:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:31:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:31:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:31:19] 2.9.2.0 1800122 4757 95988 151636 1 57 30083049 36864000 0 130560 0 4865403 99.993 160203 903 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 22:31:19] CVMFS is ok
[2025-10-12 22:31:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:31:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:31:19] Further information can be found at the LHC@home message board.
[2025-10-12 22:31:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:31:19] Checking for apptainer binary...
[2025-10-12 22:31:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:31:19] Running /usr/bin/apptainer --version
[2025-10-12 22:31:19] apptainer version 1.4.1-1.1
[2025-10-12 22:31:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:31:20] thA317a
[2025-10-12 22:31:20] apptainer works
[2025-10-12 22:31:20] Set ATHENA_PROC_NUMBER=4
[2025-10-12 22:31:20] Set ATHENA_CORE_NUMBER=4
[2025-10-12 22:31:20] Starting ATLAS job with PandaID=6839821281
[2025-10-12 22:31:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:32:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:32:52] 2025-10-12 21:32:22,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:32:52] 2025-10-12 21:32:22,659 | INFO     | [job] control thread has finished
[2025-10-12 23:32:52] 2025-10-12 21:32:22,682 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:32:52] 2025-10-12 21:32:22,922 | INFO     | [job] validate thread has finished
[2025-10-12 23:32:52] 2025-10-12 21:32:23,017 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:32:52] 2025-10-12 21:32:23,099 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:32:52] 2025-10-12 21:32:23,258 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:32:52] 2025-10-12 21:32:23,274 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:32:52] 2025-10-12 21:32:24,582 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:32:52] 2025-10-12 21:32:25,438 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:32:52] 2025-10-12 21:32:30,162 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:32:52] 2025-10-12 21:32:31,746 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:32:52] 2025-10-12 21:32:32,751 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:32:52] 2025-10-12 21:32:32,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258461587264)>', '<ExcThread(monitor, started 140257500579584)>']
[2025-10-12 23:32:52] 2025-10-12 21:32:37,951 | INFO     | all workflow threads have been joined
[2025-10-12 23:32:52] 2025-10-12 21:32:37,951 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:32:52] 2025-10-12 21:32:37,952 | INFO     | traces error code: 0
[2025-10-12 23:32:52] 2025-10-12 21:32:37,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:32:52] 2025-10-12 21:32:51,877 | INFO     | PID=3671849 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:32:52] 2025-10-12 21:32:51,878 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:32:52] 2025-10-12 21:32:51,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:32:52] 2025-10-12 21:32:51,878 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:32:52] 2025-10-12 21:32:51,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:32:52] 2025-10-12 21:32:51,878 | INFO     | [monitor] control thread has ended
[2025-10-12 23:32:52] 2025-10-12 21:32:51,923 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:32:52] 2025-10-12 21:32:51,925 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:32:52] 2025-10-12 21:32:51,928 [wrapper] pilotpid: 3671849
[2025-10-12 23:32:52] 2025-10-12 21:32:51,930 [wrapper] Pilot exit status: 0
[2025-10-12 23:32:52] 2025-10-12 21:32:51,938 [wrapper] pandaids: 6839821281
[2025-10-12 23:32:52] 2025-10-12 21:32:51,957 [wrapper] cleanup supervisor_pilot 3688187 3671850
[2025-10-12 23:32:52] 2025-10-12 21:32:51,960 [wrapper] Test setup, not cleaning
[2025-10-12 23:32:52] 2025-10-12 21:32:51,962 [wrapper] apfmon messages muted
[2025-10-12 23:32:52] 2025-10-12 21:32:51,965 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:32:52] 2025-10-12 21:32:51,967 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:32:52]  *** Error codes and diagnostics ***
[2025-10-12 23:32:52]     "exeErrorCode": 0,
[2025-10-12 23:32:52]     "exeErrorDiag": "",
[2025-10-12 23:32:52]     "pilotErrorCode": 0,
[2025-10-12 23:32:52]     "pilotErrorDiag": "",
[2025-10-12 23:32:52]  *** Listing of results directory ***
[2025-10-12 23:32:52] total 404228
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc    557409 Oct 12 10:52 pilot3.tar.gz
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc      5112 Oct 12 11:01 queuedata.json
[2025-10-12 23:32:52] -rwx------ 1 boinc boinc     36292 Oct 12 11:03 runpilot2-wrapper.sh
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc       100 Oct 12 22:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:32:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 22:31 run_atlas
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc       105 Oct 12 22:31 job.xml
[2025-10-12 23:32:52] -rw-r--r-- 2 boinc boinc 221554651 Oct 12 22:31 EVNT.46676267._003559.pool.root.1
[2025-10-12 23:32:52] -rw-r--r-- 2 boinc boinc    569685 Oct 12 22:31 input.tar.gz
[2025-10-12 23:32:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:31 start_atlas.sh
[2025-10-12 23:32:52] drwxrwx--x 2 boinc boinc      4096 Oct 12 22:31 shared
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:31 boinc_setup_complete
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc      6440 Oct 12 22:31 init_data.xml
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:31 boinc_lockfile
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc      2550 Oct 12 22:31 pandaJob.out
[2025-10-12 23:32:52] -rw------- 1 boinc boinc    975536 Oct 12 22:31 agis_schedconf.cvmfs.json
[2025-10-12 23:32:52] -rw------- 1 boinc boinc   1560580 Oct 12 22:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:32:52] drwx------ 5 boinc boinc      4096 Oct 12 22:31 pilot3
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc       530 Oct 12 23:31 boinc_task_state.xml
[2025-10-12 23:32:52] -rw------- 1 boinc boinc 186888663 Oct 12 23:31 HITS.46676269._074969.pool.root.1
[2025-10-12 23:32:52] -rw------- 1 boinc boinc      1015 Oct 12 23:32 memory_monitor_summary.json
[2025-10-12 23:32:52] -rw------- 1 boinc boinc    245460 Oct 12 23:32 log.46676269._074969.job.log.tgz.1
[2025-10-12 23:32:52] -rw------- 1 boinc boinc      7751 Oct 12 23:32 heartbeat.json
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc      8192 Oct 12 23:32 boinc_mmap_file
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc        27 Oct 12 23:32 wrapper_checkpoint.txt
[2025-10-12 23:32:52] -rw------- 1 boinc boinc       747 Oct 12 23:32 pilotlog.txt
[2025-10-12 23:32:52] -rw------- 1 boinc boinc        95 Oct 12 23:32 pilot_heartbeat.json
[2025-10-12 23:32:52] -rw------- 1 boinc boinc    553457 Oct 12 23:32 log.46676269._074969.job.log.1
[2025-10-12 23:32:52] -rw------- 1 boinc boinc       357 Oct 12 23:32 output.list
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc       620 Oct 12 23:32 runtime_log
[2025-10-12 23:32:52] -rw------- 1 boinc boinc    819200 Oct 12 23:32 result.tar.gz
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc      8782 Oct 12 23:32 runtime_log.err
[2025-10-12 23:32:52] -rw------- 1 boinc boinc       659 Oct 12 23:32 8kYNDmKA7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHHjNDm1Noxsn.diag
[2025-10-12 23:32:52] -rw-r--r-- 1 boinc boinc      5938 Oct 12 23:32 stderr.txt
[2025-10-12 23:32:52] HITS file was successfully produced:
[2025-10-12 23:32:52] -rw------- 1 boinc boinc 186888663 Oct 12 23:31 shared/HITS.pool.root.1
[2025-10-12 23:32:52]  *** Contents of shared directory: ***
[2025-10-12 23:32:52] total 400260
[2025-10-12 23:32:52] -rw-r--r-- 2 boinc boinc 221554651 Oct 12 22:31 ATLAS.root_0
[2025-10-12 23:32:52] -rw-r--r-- 2 boinc boinc    569685 Oct 12 22:31 input.tar.gz
[2025-10-12 23:32:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:31 start_atlas.sh
[2025-10-12 23:32:52] -rw------- 1 boinc boinc 186888663 Oct 12 23:31 HITS.pool.root.1
[2025-10-12 23:32:52] -rw------- 1 boinc boinc    819200 Oct 12 23:32 result.tar.gz
23:32:53 (3668048): run_atlas exited; CPU time 13663.672235
23:32:53 (3668048): called boinc_finish(0)

</stderr_txt>
]]>

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