Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:59:16 (4063345): wrapper (7.7.26015): starting
10:59:16 (4063345): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 10:59:16] Arguments: --nthreads 4
[2025-10-13 10:59:16] Threads: 4
[2025-10-13 10:59:16] Checking for CVMFS
[2025-10-13 10:59:16] No cvmfs_config command found, will try listing directly
[2025-10-13 10:59:16] CVMFS is ok
[2025-10-13 10:59:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:59:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:59:16] Further information can be found at the LHC@home message board.
[2025-10-13 10:59:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:59:16] Checking for apptainer binary...
[2025-10-13 10:59:16] which: no apptainer in ((null))
[2025-10-13 10:59:16] apptainer is not installed, using version from CVMFS
[2025-10-13 10:59:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:59:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-13 10:59:16] apptainer works
[2025-10-13 10:59:16] Set ATHENA_PROC_NUMBER=4
[2025-10-13 10:59:16] Set ATHENA_CORE_NUMBER=4
[2025-10-13 10:59:16] Starting ATLAS job with PandaID=6839821286
[2025-10-13 10:59:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:39:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:39:14] 2025-10-13 11:37:50,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:39:14] 2025-10-13 11:37:51,042 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 13:39:14] 2025-10-13 11:37:51,059 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2720.608867187501
[2025-10-13 13:39:14] 2025-10-13 11:37:51,082 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-6839821286/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:39:14] 2025-10-13 11:37:51,082 | INFO     | extracted standard info from prmon json
[2025-10-13 13:39:14] 2025-10-13 11:37:51,082 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 13:39:14] 2025-10-13 11:37:51,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:39:14] 2025-10-13 11:37:51,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:39:14] 2025-10-13 11:37:51,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:39:14] 2025-10-13 11:37:51,085 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:39:14] 2025-10-13 11:37:51,086 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,087 | INFO     | sum of deviations: 21541162532.0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,087 | INFO     | mean x: 1760350702.0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,087 | INFO     | mean y: 2308107.683870968
[2025-10-13 13:39:14] 2025-10-13 11:37:51,087 | INFO     | -- intersect: -32838428831.42863
[2025-10-13 13:39:14] 2025-10-13 11:37:51,087 | INFO     | intersect: -32838428831.42863
[2025-10-13 13:39:14] 2025-10-13 11:37:51,087 | INFO     | chi2: 1.3172687626789281
[2025-10-13 13:39:14] 2025-10-13 11:37:51,087 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 13:39:14] 2025-10-13 11:37:51,088 | INFO     | sum of deviations: 20727505797.00001
[2025-10-13 13:39:14] 2025-10-13 11:37:51,088 | INFO     | mean x: 1760350549.5
[2025-10-13 13:39:14] 2025-10-13 11:37:51,089 | INFO     | mean y: 2306960.72
[2025-10-13 13:39:14] 2025-10-13 11:37:51,089 | INFO     | -- intersect: -34864590674.76836
[2025-10-13 13:39:14] 2025-10-13 11:37:51,089 | INFO     | intersect: -34864590674.76836
[2025-10-13 13:39:14] 2025-10-13 11:37:51,089 | INFO     | chi2: 1.31824770915486
[2025-10-13 13:39:14] 2025-10-13 11:37:51,089 | INFO     | current chi2=1.31824770915486 (change=-0.07431638126306829 %)
[2025-10-13 13:39:14] 2025-10-13 11:37:51,089 | INFO     | right removable region: 149
[2025-10-13 13:39:14] 2025-10-13 11:37:51,089 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 13:39:14] 2025-10-13 11:37:51,090 | INFO     | sum of deviations: 2178159452.0000005
[2025-10-13 13:39:14] 2025-10-13 11:37:51,090 | INFO     | mean x: 1760350854.5
[2025-10-13 13:39:14] 2025-10-13 11:37:51,090 | INFO     | mean y: 2334934.96
[2025-10-13 13:39:14] 2025-10-13 11:37:51,090 | INFO     | -- intersect: -3661669627.3286614
[2025-10-13 13:39:14] 2025-10-13 11:37:51,090 | INFO     | intersect: -3661669627.3286614
[2025-10-13 13:39:14] 2025-10-13 11:37:51,091 | INFO     | chi2: 0.0011225800286316175
[2025-10-13 13:39:14] 2025-10-13 11:37:51,091 | INFO     | current chi2=0.0011225800286316175 (change=99.9147797275365 %)
[2025-10-13 13:39:14] 2025-10-13 11:37:51,091 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,092 | INFO     | sum of deviations: 2009302485.0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,092 | INFO     | mean x: 1760351007.0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,092 | INFO     | mean y: 2335180.834482759
[2025-10-13 13:39:14] 2025-10-13 11:37:51,092 | INFO     | -- intersect: -3739484201.8566833
[2025-10-13 13:39:14] 2025-10-13 11:37:51,092 | INFO     | intersect: -3739484201.8566833
[2025-10-13 13:39:14] 2025-10-13 11:37:51,092 | INFO     | chi2: 0.0009460882718185441
[2025-10-13 13:39:14] 2025-10-13 11:37:51,092 | INFO     | current chi2=0.0009460882718185441 (change=15.721975477170222 %)
[2025-10-13 13:39:14] 2025-10-13 11:37:51,092 | INFO     | left removable region: 20
[2025-10-13 13:39:14] 2025-10-13 11:37:51,093 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,093 | INFO     | sum of deviations: 1432559868.0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,093 | INFO     | mean x: 1760351129.0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,093 | INFO     | mean y: 2335630.7596899224
[2025-10-13 13:39:14] 2025-10-13 11:37:51,093 | INFO     | -- intersect: -3786367941.916548
[2025-10-13 13:39:14] 2025-10-13 11:37:51,094 | INFO     | intersect: -3786367941.916548
[2025-10-13 13:39:14] 2025-10-13 11:37:51,094 | INFO     | chi2: 0.0003157825890148012
[2025-10-13 13:39:14] 2025-10-13 11:37:51,094 | INFO     | -- intersect: -3786367941.916548
[2025-10-13 13:39:14] 2025-10-13 11:37:51,094 | INFO     | current memory leak: 2.15 B/s (using 129 data points, chi2=0.00)
[2025-10-13 13:39:14] 2025-10-13 11:37:51,094 | INFO     | could have reported an average CPU frequency of 2704 MHz (9 samples)
[2025-10-13 13:39:14] 2025-10-13 11:37:51,094 | INFO     | ..............................
[2025-10-13 13:39:14] 2025-10-13 11:37:51,094 | INFO     | . Timing measurements:
[2025-10-13 13:39:14] 2025-10-13 11:37:51,094 | INFO     | . get job = 0 s
[2025-10-13 13:39:14] 2025-10-13 11:37:51,095 | INFO     | . initial setup = 1 s
[2025-10-13 13:39:14] 2025-10-13 11:37:51,095 | INFO     | . payload setup = 9 s
[2025-10-13 13:39:14] 2025-10-13 11:37:51,095 | INFO     | . stage-in = 0 s
[2025-10-13 13:39:14] 2025-10-13 11:37:51,095 | INFO     | . payload execution = 9457 s
[2025-10-13 13:39:14] 2025-10-13 11:37:51,095 | INFO     | . stage-out = 0 s
[2025-10-13 13:39:14] 2025-10-13 11:37:51,095 | INFO     | . log creation = 0 s
[2025-10-13 13:39:14] 2025-10-13 11:37:51,095 | INFO     | ..............................
[2025-10-13 13:39:14] 2025-10-13 11:37:51,188 | INFO     | 
[2025-10-13 13:39:14] 2025-10-13 11:37:51,188 | INFO     | job summary report
[2025-10-13 13:39:14] 2025-10-13 11:37:51,189 | INFO     | --------------------------------------------------
[2025-10-13 13:39:14] 2025-10-13 11:37:51,189 | INFO     | PanDA job id: 6839821286
[2025-10-13 13:39:14] 2025-10-13 11:37:51,189 | INFO     | task id: 46676269
[2025-10-13 13:39:14] 2025-10-13 11:37:51,189 | INFO     | errors: (none)
[2025-10-13 13:39:14] 2025-10-13 11:37:51,189 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:39:14] 2025-10-13 11:37:51,189 | INFO     | pilot state: finished 
[2025-10-13 13:39:14] 2025-10-13 11:37:51,189 | INFO     | transexitcode: 0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,189 | INFO     | exeerrorcode: 0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,189 | INFO     | exeerrordiag: 
[2025-10-13 13:39:14] 2025-10-13 11:37:51,189 | INFO     | exitcode: 0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,189 | INFO     | exitmsg: OK
[2025-10-13 13:39:14] 2025-10-13 11:37:51,190 | INFO     | cpuconsumptiontime: 36345 s
[2025-10-13 13:39:14] 2025-10-13 11:37:51,190 | INFO     | nevents: 400
[2025-10-13 13:39:14] 2025-10-13 11:37:51,190 | INFO     | neventsw: 0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,190 | INFO     | pid: 4116759
[2025-10-13 13:39:14] 2025-10-13 11:37:51,190 | INFO     | pgrp: 4116759
[2025-10-13 13:39:14] 2025-10-13 11:37:51,190 | INFO     | corecount: 4
[2025-10-13 13:39:14] 2025-10-13 11:37:51,190 | INFO     | event service: False
[2025-10-13 13:39:14] 2025-10-13 11:37:51,190 | INFO     | sizes: {0: 2348868, 1: 2348868, 7: 2349158, 11: 2349186, 9470: 2377910, 9471: 2377909, 9473: 2387113, 9476: 2387169, 9482: 2387427}
[2025-10-13 13:39:14] 2025-10-13 11:37:51,190 | INFO     | --------------------------------------------------
[2025-10-13 13:39:14] 2025-10-13 11:37:51,190 | INFO     | 
[2025-10-13 13:39:14] 2025-10-13 11:37:51,191 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2025-10-13 13:39:14] 2025-10-13 11:37:51,218 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,218 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,218 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,218 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,220 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:39:14] 2025-10-13 11:37:51,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,220 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:39:14] 2025-10-13 11:37:51,220 | INFO     | job 6839821286 has completed (purged errors)
[2025-10-13 13:39:14] 2025-10-13 11:37:51,220 | INFO     | overall cleanup function is called
[2025-10-13 13:39:14] 2025-10-13 11:37:52,229 | INFO     | --- collectZombieJob: --- 10, [4116759]
[2025-10-13 13:39:14] 2025-10-13 11:37:52,229 | INFO     | zombie collector waiting for pid 4116759
[2025-10-13 13:39:14] 2025-10-13 11:37:52,230 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:39:14] 2025-10-13 11:37:52,230 | INFO     | collected zombie processes
[2025-10-13 13:39:14] 2025-10-13 11:37:52,230 | INFO     | will attempt to kill all subprocesses of pid=4116759
[2025-10-13 13:39:14] 2025-10-13 11:37:52,961 | INFO     | process IDs to be killed: [4116759] (in reverse order)
[2025-10-13 13:39:14] 2025-10-13 11:37:53,218 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:39:14] 2025-10-13 11:37:53,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:39:14] 2025-10-13 11:37:53,250 | INFO     | did not find any defunct processes belonging to 4116759
[2025-10-13 13:39:14] 2025-10-13 11:37:53,279 | INFO     | did not find any defunct processes belonging to 4116759
[2025-10-13 13:39:14] 2025-10-13 11:37:53,280 | INFO     | ready for new job
[2025-10-13 13:39:14] 2025-10-13 11:37:53,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:39:14] 2025-10-13 11:37:53,283 | INFO     | ***************************************
[2025-10-13 13:39:14] 2025-10-13 11:37:53,283 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:39:14] 2025-10-13 11:37:53,283 | INFO     | ***************************************
[2025-10-13 13:39:14] 2025-10-13 11:37:53,283 | INFO     | 
[2025-10-13 13:39:14] 2025-10-13 11:37:53,292 | INFO     | architecture information:
[2025-10-13 13:39:14] 2025-10-13 11:37:53,292 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:39:14] 2025-10-13 11:37:53,316 | INFO     | cat /etc/os-release:
[2025-10-13 13:39:14] NAME="CentOS Linux"
[2025-10-13 13:39:14] VERSION="7 (Core)"
[2025-10-13 13:39:14] ID="centos"
[2025-10-13 13:39:14] ID_LIKE="rhel fedora"
[2025-10-13 13:39:14] VERSION_ID="7"
[2025-10-13 13:39:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:39:14] ANSI_COLOR="0;31"
[2025-10-13 13:39:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:39:14] HOME_URL="https://www.centos.org/"
[2025-10-13 13:39:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:39:14] 
[2025-10-13 13:39:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:39:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:39:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:39:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:39:14] 
[2025-10-13 13:39:14] 2025-10-13 11:37:53,317 | INFO     | ***************************************
[2025-10-13 13:39:14] 2025-10-13 11:37:53,820 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2025-10-13 13:39:14] 2025-10-13 11:37:53,848 | INFO     | sufficient remaining disk space (3335193100288 B)
[2025-10-13 13:39:14] 2025-10-13 11:37:53,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:39:14] 2025-10-13 11:37:53,849 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:39:14] 2025-10-13 11:37:53,849 | INFO     | update_server=False
[2025-10-13 13:39:14] 2025-10-13 11:37:53,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:39:14] 2025-10-13 11:37:54,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:39:14] 2025-10-13 11:37:54,000 | INFO     | aborting loop
[2025-10-13 13:39:14] 2025-10-13 11:37:54,103 | INFO     | all job control threads have been joined
[2025-10-13 13:39:14] 2025-10-13 11:37:54,252 | INFO     | all payload control threads have been joined
[2025-10-13 13:39:14] 2025-10-13 11:37:54,450 | INFO     | all data control threads have been joined
[2025-10-13 13:39:14] 2025-10-13 11:37:54,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:39:14] 2025-10-13 11:37:54,854 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:54,874 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:54,891 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:39:14] 2025-10-13 11:37:55,005 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:55,109 | INFO     | [job] control thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:55,257 | INFO     | [payload] control thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:55,304 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:55,397 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:55,455 | INFO     | [data] control thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:55,457 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:55,958 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:56,011 | INFO     | [job] validate thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:56,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:39:14] 2025-10-13 11:37:56,374 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:56,505 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:57,204 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:37:58,897 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:38:04,760 | INFO     | job.realtimelogging is not enabled
[2025-10-13 13:39:14] 2025-10-13 11:38:05,761 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:39:14] 2025-10-13 11:38:21,770 | INFO     | 9502s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 13:39:14] 2025-10-13 11:38:23,714 | INFO     | PID=4076975 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:39:14] 2025-10-13 11:38:23,714 | INFO     | .. there are 8 such processes running
[2025-10-13 13:39:14] 2025-10-13 11:38:23,714 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:39:14] 2025-10-13 11:38:23,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:39:14] 2025-10-13 11:38:23,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:39:14] 2025-10-13 11:38:45,192 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:39:14] 2025-10-13 11:38:46,932 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23370872452928)>', '<ExcThread(monitor, started 23370636695296)>']
[2025-10-13 13:39:14] 2025-10-13 11:38:47,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:39:14] 2025-10-13 11:38:47,832 | INFO     | [monitor] control thread has ended
[2025-10-13 13:39:14] 2025-10-13 11:38:51,957 | INFO     | all workflow threads have been joined
[2025-10-13 13:39:14] 2025-10-13 11:38:51,957 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:39:14] 2025-10-13 11:38:51,957 | INFO     | traces error code: 0
[2025-10-13 13:39:14] 2025-10-13 11:38:51,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:39:14] 2025-10-13 11:38:52,096 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:39:14] 2025-10-13 11:38:52,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:39:14] 2025-10-13 11:38:52,104 [wrapper] pilotpid: 4076975
[2025-10-13 13:39:14] 2025-10-13 11:38:52,107 [wrapper] Pilot exit status: 0
[2025-10-13 13:39:14] 2025-10-13 11:38:52,122 [wrapper] pandaids: 6839821286
[2025-10-13 13:39:14] 2025-10-13 11:38:52,294 [wrapper] cleanup supervisor_pilot  247878 4076976
[2025-10-13 13:39:14] 2025-10-13 11:38:52,298 [wrapper] Test setup, not cleaning
[2025-10-13 13:39:14] 2025-10-13 11:38:52,302 [wrapper] apfmon messages muted
[2025-10-13 13:39:14] 2025-10-13 11:38:52,305 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:39:14] 2025-10-13 11:38:52,309 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:39:14]  *** Error codes and diagnostics ***
[2025-10-13 13:39:14]     "exeErrorCode": 0,
[2025-10-13 13:39:14]     "exeErrorDiag": "",
[2025-10-13 13:39:14]     "pilotErrorCode": 0,
[2025-10-13 13:39:14]     "pilotErrorDiag": "",
[2025-10-13 13:39:14]  *** Listing of results directory ***
[2025-10-13 13:39:14] total 411200
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc    557409 Oct 12 10:52 pilot3.tar.gz
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc      5112 Oct 12 11:01 queuedata.json
[2025-10-13 13:39:14] -rwx------ 1 boinc boinc     36292 Oct 12 11:03 runpilot2-wrapper.sh
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:39:14] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:59 run_atlas
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:59 job.xml
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc      6685 Oct 13 10:59 init_data.xml
[2025-10-13 13:39:14] -rw-r--r-- 2 boinc boinc 221554651 Oct 13 10:59 EVNT.46676267._003559.pool.root.1
[2025-10-13 13:39:14] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:59 start_atlas.sh
[2025-10-13 13:39:14] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:59 shared
[2025-10-13 13:39:14] -rw-r--r-- 2 boinc boinc    569682 Oct 13 10:59 input.tar.gz
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:59 boinc_lockfile
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:59 pandaJob.out
[2025-10-13 13:39:14] -rw------- 1 boinc boinc    972857 Oct 13 10:59 agis_schedconf.cvmfs.json
[2025-10-13 13:39:14] -rw------- 1 boinc boinc   1560580 Oct 13 10:59 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:39:14] drwx------ 5 boinc boinc      4096 Oct 13 10:59 pilot3
[2025-10-13 13:39:14] -rw------- 1 boinc boinc 192267271 Oct 13 13:37 HITS.46676269._074974.pool.root.1
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc       529 Oct 13 13:37 boinc_task_state.xml
[2025-10-13 13:39:14] -rw------- 1 boinc boinc      1026 Oct 13 13:37 memory_monitor_summary.json
[2025-10-13 13:39:14] -rw------- 1 boinc boinc        95 Oct 13 13:37 pilot_heartbeat.json
[2025-10-13 13:39:14] -rw------- 1 boinc boinc    338827 Oct 13 13:37 log.46676269._074974.job.log.tgz.1
[2025-10-13 13:39:14] -rw------- 1 boinc boinc      7777 Oct 13 13:37 heartbeat.json
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc        26 Oct 13 13:38 wrapper_checkpoint.txt
[2025-10-13 13:39:14] -rw------- 1 boinc boinc      5021 Oct 13 13:38 pilotlog.txt
[2025-10-13 13:39:14] -rw------- 1 boinc boinc   1331553 Oct 13 13:38 log.46676269._074974.job.log.1
[2025-10-13 13:39:14] -rw------- 1 boinc boinc       357 Oct 13 13:38 output.list
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc       620 Oct 13 13:38 runtime_log
[2025-10-13 13:39:14] -rw------- 1 boinc boinc   1689600 Oct 13 13:38 result.tar.gz
[2025-10-13 13:39:14] -rw------- 1 boinc boinc       663 Oct 13 13:38 sdeNDmKA7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMHjNDmF5eZhn.diag
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc      9069 Oct 13 13:38 runtime_log.err
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:39 boinc_mmap_file
[2025-10-13 13:39:14] -rw-r--r-- 1 boinc boinc     20918 Oct 13 13:39 stderr.txt
[2025-10-13 13:39:14] HITS file was successfully produced:
[2025-10-13 13:39:14] -rw------- 1 boinc boinc 192267271 Oct 13 13:37 shared/HITS.pool.root.1
[2025-10-13 13:39:14]  *** Contents of shared directory: ***
[2025-10-13 13:39:14] total 406364
[2025-10-13 13:39:14] -rw-r--r-- 2 boinc boinc 221554651 Oct 13 10:59 ATLAS.root_0
[2025-10-13 13:39:14] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:59 start_atlas.sh
[2025-10-13 13:39:14] -rw-r--r-- 2 boinc boinc    569682 Oct 13 10:59 input.tar.gz
[2025-10-13 13:39:14] -rw------- 1 boinc boinc 192267271 Oct 13 13:37 HITS.pool.root.1
[2025-10-13 13:39:14] -rw------- 1 boinc boinc   1689600 Oct 13 13:38 result.tar.gz
13:39:15 (4063345): run_atlas exited; CPU time 36942.587931
13:39:15 (4063345): called boinc_finish(0)

</stderr_txt>
]]>

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