Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:32:53 (3512459): wrapper (7.7.26015): starting
07:32:53 (3512459): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 07:32:53] Arguments: --nthreads 4
[2025-10-13 07:32:53] Threads: 4
[2025-10-13 07:32:53] Checking for CVMFS
[2025-10-13 07:32:53] No cvmfs_config command found, will try listing directly
[2025-10-13 07:32:53] CVMFS is ok
[2025-10-13 07:32:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:32:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:32:53] Further information can be found at the LHC@home message board.
[2025-10-13 07:32:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:32:53] Checking for apptainer binary...
[2025-10-13 07:32:53] which: no apptainer in ((null))
[2025-10-13 07:32:53] apptainer is not installed, using version from CVMFS
[2025-10-13 07:32:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:32:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-10-13 07:32:53] apptainer works
[2025-10-13 07:32:53] Set ATHENA_PROC_NUMBER=4
[2025-10-13 07:32:53] Set ATHENA_CORE_NUMBER=4
[2025-10-13 07:32:53] Starting ATLAS job with PandaID=6839590701
[2025-10-13 07:32:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:05:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:05:25] 2025-10-13 08:41:45,175 | INFO     | monitor loop #831: job 0:6839590701 is in state 'finished'
[2025-10-13 11:05:25] 2025-10-13 08:41:45,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:05:25] 2025-10-13 08:41:45,775 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 11:05:25] 2025-10-13 08:41:45,783 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2634.512725
[2025-10-13 11:05:25] 2025-10-13 08:41:45,791 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6839590701/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:05:25] 2025-10-13 08:41:45,792 | INFO     | extracted standard info from prmon json
[2025-10-13 11:05:25] 2025-10-13 08:41:45,792 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:05:25] 2025-10-13 08:41:45,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:05:25] 2025-10-13 08:41:45,793 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:05:25] 2025-10-13 08:41:45,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:05:25] 2025-10-13 08:41:45,797 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:05:25] 2025-10-13 08:41:45,798 | INFO     | sum of square deviations: 1963274020.0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,799 | INFO     | sum of deviations: -14011062794.000004
[2025-10-13 11:05:25] 2025-10-13 08:41:45,799 | INFO     | mean x: 1760339222.0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,799 | INFO     | mean y: 2384124.8756756755
[2025-10-13 11:05:25] 2025-10-13 08:41:45,800 | INFO     | -- intersect: 12565186427.013363
[2025-10-13 11:05:25] 2025-10-13 08:41:45,800 | INFO     | intersect: 12565186427.013363
[2025-10-13 11:05:25] 2025-10-13 08:41:45,800 | INFO     | chi2: 1.4792373680382942
[2025-10-13 11:05:25] 2025-10-13 08:41:45,801 | INFO     | sum of square deviations: 1808350185.0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,802 | INFO     | sum of deviations: -13001987221.499994
[2025-10-13 11:05:25] 2025-10-13 08:41:45,802 | INFO     | mean x: 1760339069.5
[2025-10-13 11:05:25] 2025-10-13 08:41:45,802 | INFO     | mean y: 2385118.427777778
[2025-10-13 11:05:25] 2025-10-13 08:41:45,802 | INFO     | -- intersect: 12659173763.126144
[2025-10-13 11:05:25] 2025-10-13 08:41:45,802 | INFO     | intersect: 12659173763.126144
[2025-10-13 11:05:25] 2025-10-13 08:41:45,803 | INFO     | chi2: 1.478999777092442
[2025-10-13 11:05:25] 2025-10-13 08:41:45,803 | INFO     | current chi2=1.478999777092442 (change=0.016061718760348703 %)
[2025-10-13 11:05:25] 2025-10-13 08:41:45,803 | INFO     | right removable region: 179
[2025-10-13 11:05:25] 2025-10-13 08:41:45,803 | INFO     | sum of square deviations: 1808350185.0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,805 | INFO     | sum of deviations: -38592976780.5
[2025-10-13 11:05:25] 2025-10-13 08:41:45,805 | INFO     | mean x: 1760339374.5
[2025-10-13 11:05:25] 2025-10-13 08:41:45,805 | INFO     | mean y: 2407992.8722222224
[2025-10-13 11:05:25] 2025-10-13 08:41:45,805 | INFO     | -- intersect: 37570760167.91203
[2025-10-13 11:05:25] 2025-10-13 08:41:45,805 | INFO     | intersect: 37570760167.91203
[2025-10-13 11:05:25] 2025-10-13 08:41:45,806 | INFO     | chi2: 0.09527776591479907
[2025-10-13 11:05:25] 2025-10-13 08:41:45,806 | INFO     | current chi2=0.09527776591479907 (change=93.5589941159239 %)
[2025-10-13 11:05:25] 2025-10-13 08:41:45,806 | INFO     | sum of square deviations: 1661798600.0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,807 | INFO     | sum of deviations: -36819115233.00001
[2025-10-13 11:05:25] 2025-10-13 08:41:45,807 | INFO     | mean x: 1760339527.0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,807 | INFO     | mean y: 2406124.3714285716
[2025-10-13 11:05:25] 2025-10-13 08:41:45,808 | INFO     | -- intersect: 39004812248.56586
[2025-10-13 11:05:25] 2025-10-13 08:41:45,808 | INFO     | intersect: 39004812248.56586
[2025-10-13 11:05:25] 2025-10-13 08:41:45,808 | INFO     | chi2: 0.0902433437576508
[2025-10-13 11:05:25] 2025-10-13 08:41:45,808 | INFO     | current chi2=0.0902433437576508 (change=5.2839422805633705 %)
[2025-10-13 11:05:25] 2025-10-13 08:41:45,808 | INFO     | left removable region: 20
[2025-10-13 11:05:25] 2025-10-13 08:41:45,809 | INFO     | sum of square deviations: 1246386160.0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,810 | INFO     | sum of deviations: -28800627169.0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,810 | INFO     | mean x: 1760339649.0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,810 | INFO     | mean y: 2400636.433962264
[2025-10-13 11:05:25] 2025-10-13 08:41:45,810 | INFO     | -- intersect: 40679108665.39452
[2025-10-13 11:05:25] 2025-10-13 08:41:45,810 | INFO     | intersect: 40679108665.39452
[2025-10-13 11:05:25] 2025-10-13 08:41:45,811 | INFO     | chi2: 0.0862718168297648
[2025-10-13 11:05:25] 2025-10-13 08:41:45,811 | INFO     | -- intersect: 40679108665.39452
[2025-10-13 11:05:25] 2025-10-13 08:41:45,811 | INFO     | current memory leak: -23.11 B/s (using 159 data points, chi2=0.09)
[2025-10-13 11:05:25] 2025-10-13 08:41:45,811 | INFO     | could have reported an average CPU frequency of 2605 MHz (10 samples)
[2025-10-13 11:05:25] 2025-10-13 08:41:45,812 | INFO     | ..............................
[2025-10-13 11:05:25] 2025-10-13 08:41:45,812 | INFO     | . Timing measurements:
[2025-10-13 11:05:25] 2025-10-13 08:41:45,812 | INFO     | . get job = 0 s
[2025-10-13 11:05:25] 2025-10-13 08:41:45,812 | INFO     | . initial setup = 1 s
[2025-10-13 11:05:25] 2025-10-13 08:41:45,812 | INFO     | . payload setup = 5 s
[2025-10-13 11:05:25] 2025-10-13 08:41:45,812 | INFO     | . stage-in = 0 s
[2025-10-13 11:05:25] 2025-10-13 08:41:45,812 | INFO     | . payload execution = 11286 s
[2025-10-13 11:05:25] 2025-10-13 08:41:45,813 | INFO     | . stage-out = 1 s
[2025-10-13 11:05:25] 2025-10-13 08:41:45,813 | INFO     | . log creation = 0 s
[2025-10-13 11:05:25] 2025-10-13 08:41:45,813 | INFO     | ..............................
[2025-10-13 11:05:25] 2025-10-13 08:41:45,924 | INFO     | 
[2025-10-13 11:05:25] 2025-10-13 08:41:45,924 | INFO     | job summary report
[2025-10-13 11:05:25] 2025-10-13 08:41:45,924 | INFO     | --------------------------------------------------
[2025-10-13 11:05:25] 2025-10-13 08:41:45,924 | INFO     | PanDA job id: 6839590701
[2025-10-13 11:05:25] 2025-10-13 08:41:45,924 | INFO     | task id: 46676269
[2025-10-13 11:05:25] 2025-10-13 08:41:45,924 | INFO     | errors: (none)
[2025-10-13 11:05:25] 2025-10-13 08:41:45,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:05:25] 2025-10-13 08:41:45,925 | INFO     | pilot state: finished 
[2025-10-13 11:05:25] 2025-10-13 08:41:45,925 | INFO     | transexitcode: 0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,925 | INFO     | exeerrorcode: 0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,925 | INFO     | exeerrordiag: 
[2025-10-13 11:05:25] 2025-10-13 08:41:45,925 | INFO     | exitcode: 0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,925 | INFO     | exitmsg: OK
[2025-10-13 11:05:25] 2025-10-13 08:41:45,925 | INFO     | cpuconsumptiontime: 43727 s
[2025-10-13 11:05:25] 2025-10-13 08:41:45,925 | INFO     | nevents: 400
[2025-10-13 11:05:25] 2025-10-13 08:41:45,926 | INFO     | neventsw: 0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,926 | INFO     | pid: 3533573
[2025-10-13 11:05:25] 2025-10-13 08:41:45,926 | INFO     | pgrp: 3533573
[2025-10-13 11:05:25] 2025-10-13 08:41:45,926 | INFO     | corecount: 4
[2025-10-13 11:05:25] 2025-10-13 08:41:45,926 | INFO     | event service: False
[2025-10-13 11:05:25] 2025-10-13 08:41:45,926 | INFO     | sizes: {0: 2348695, 1: 2348894, 5: 2349156, 12: 2349212, 11296: 2378547, 11298: 2387567, 11299: 2387751, 11306: 2387945}
[2025-10-13 11:05:25] 2025-10-13 08:41:45,926 | INFO     | --------------------------------------------------
[2025-10-13 11:05:25] 2025-10-13 08:41:45,926 | INFO     | 
[2025-10-13 11:05:25] 2025-10-13 08:41:45,927 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-10-13 11:05:25] 2025-10-13 08:41:45,944 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,945 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,945 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,945 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,946 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,947 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:05:25] 2025-10-13 08:41:45,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,947 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:05:25] 2025-10-13 08:41:45,947 | INFO     | job 6839590701 has completed (purged errors)
[2025-10-13 11:05:25] 2025-10-13 08:41:45,947 | INFO     | overall cleanup function is called
[2025-10-13 11:05:25] 2025-10-13 08:41:46,955 | INFO     | --- collectZombieJob: --- 10, [3533573]
[2025-10-13 11:05:25] 2025-10-13 08:41:46,955 | INFO     | zombie collector waiting for pid 3533573
[2025-10-13 11:05:25] 2025-10-13 08:41:46,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:05:25] 2025-10-13 08:41:46,956 | INFO     | collected zombie processes
[2025-10-13 11:05:25] 2025-10-13 08:41:46,956 | INFO     | will attempt to kill all subprocesses of pid=3533573
[2025-10-13 11:05:25] 2025-10-13 08:41:47,264 | INFO     | process IDs to be killed: [3533573] (in reverse order)
[2025-10-13 11:05:25] 2025-10-13 08:41:47,341 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:05:25] 2025-10-13 08:41:47,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:05:25] 2025-10-13 08:41:47,350 | INFO     | did not find any defunct processes belonging to 3533573
[2025-10-13 11:05:25] 2025-10-13 08:41:47,357 | INFO     | did not find any defunct processes belonging to 3533573
[2025-10-13 11:05:25] 2025-10-13 08:41:47,357 | INFO     | ready for new job
[2025-10-13 11:05:25] 2025-10-13 08:41:47,357 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:05:25] 2025-10-13 08:41:47,359 | INFO     | ***************************************
[2025-10-13 11:05:25] 2025-10-13 08:41:47,359 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:05:25] 2025-10-13 08:41:47,359 | INFO     | ***************************************
[2025-10-13 11:05:25] 2025-10-13 08:41:47,360 | INFO     | 
[2025-10-13 11:05:25] 2025-10-13 08:41:47,362 | INFO     | architecture information:
[2025-10-13 11:05:25] 2025-10-13 08:41:47,362 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:05:25] 2025-10-13 08:41:47,375 | INFO     | cat /etc/os-release:
[2025-10-13 11:05:25] NAME="CentOS Linux"
[2025-10-13 11:05:25] VERSION="7 (Core)"
[2025-10-13 11:05:25] ID="centos"
[2025-10-13 11:05:25] ID_LIKE="rhel fedora"
[2025-10-13 11:05:25] VERSION_ID="7"
[2025-10-13 11:05:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:05:25] ANSI_COLOR="0;31"
[2025-10-13 11:05:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:05:25] HOME_URL="https://www.centos.org/"
[2025-10-13 11:05:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:05:25] 
[2025-10-13 11:05:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:05:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:05:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:05:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:05:25] 
[2025-10-13 11:05:25] 2025-10-13 08:41:47,375 | INFO     | ***************************************
[2025-10-13 11:05:25] 2025-10-13 08:41:47,878 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-10-13 11:05:25] 2025-10-13 08:41:47,892 | INFO     | sufficient remaining disk space (1676203261952 B)
[2025-10-13 11:05:25] 2025-10-13 08:41:47,892 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:05:25] 2025-10-13 08:41:47,893 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:05:25] 2025-10-13 08:41:47,893 | INFO     | update_server=False
[2025-10-13 11:05:25] 2025-10-13 08:41:47,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:05:25] 2025-10-13 08:41:47,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:05:25] 2025-10-13 08:41:48,264 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:05:25] 2025-10-13 08:41:48,683 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:05:25] 2025-10-13 08:41:48,684 | INFO     | aborting loop
[2025-10-13 11:05:25] 2025-10-13 08:41:48,894 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:48,898 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:48,911 | INFO     | all data control threads have been joined
[2025-10-13 11:05:25] 2025-10-13 08:41:49,089 | INFO     | all payload control threads have been joined
[2025-10-13 11:05:25] 2025-10-13 08:41:49,114 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:49,115 | INFO     | [job] validate thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:49,484 | INFO     | all job control threads have been joined
[2025-10-13 11:05:25] 2025-10-13 08:41:49,487 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:49,550 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:49,689 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:49,716 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:49,717 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:05:25] 2025-10-13 08:41:49,917 | INFO     | [data] control thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:50,094 | INFO     | [payload] control thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:50,269 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:50,352 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:50,361 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:50,489 | INFO     | [job] control thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:53,723 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:41:58,839 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:05:25] 2025-10-13 08:41:59,844 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:05:25] 2025-10-13 08:42:17,899 | INFO     | PID=3519579 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:05:25] 2025-10-13 08:42:17,900 | INFO     | .. there are 3 such processes running
[2025-10-13 11:05:25] 2025-10-13 08:42:17,900 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:05:25] 2025-10-13 08:42:17,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:05:25] 2025-10-13 08:42:17,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:05:25] 2025-10-13 08:42:22,298 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:05:25] 2025-10-13 08:42:24,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23231125587776)>', '<ExcThread(monitor, started 23230880368384)>']
[2025-10-13 11:05:25] 2025-10-13 08:42:24,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:05:25] 2025-10-13 08:42:24,926 | INFO     | [monitor] control thread has ended
[2025-10-13 11:05:25] 2025-10-13 08:42:29,155 | INFO     | all workflow threads have been joined
[2025-10-13 11:05:25] 2025-10-13 08:42:29,155 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:05:25] 2025-10-13 08:42:29,156 | INFO     | traces error code: 0
[2025-10-13 11:05:25] 2025-10-13 08:42:29,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:05:25] 2025-10-13 08:42:29,270 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:05:25] 2025-10-13 08:42:29,273 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:05:25] 2025-10-13 08:42:29,275 [wrapper] pilotpid: 3519579
[2025-10-13 11:05:25] 2025-10-13 08:42:29,278 [wrapper] Pilot exit status: 0
[2025-10-13 11:05:25] 2025-10-13 08:42:29,287 [wrapper] pandaids: 6839590701
[2025-10-13 11:05:25] 2025-10-13 08:42:29,340 [wrapper] cleanup supervisor_pilot 3668971 3519580
[2025-10-13 11:05:25] 2025-10-13 08:42:29,343 [wrapper] Test setup, not cleaning
[2025-10-13 11:05:25] 2025-10-13 08:42:29,345 [wrapper] apfmon messages muted
[2025-10-13 11:05:25] 2025-10-13 08:42:29,347 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:05:25] 2025-10-13 08:42:29,350 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:05:25]  *** Error codes and diagnostics ***
[2025-10-13 11:05:25]     "exeErrorCode": 0,
[2025-10-13 11:05:25]     "exeErrorDiag": "",
[2025-10-13 11:05:25]     "pilotErrorCode": 0,
[2025-10-13 11:05:25]     "pilotErrorDiag": "",
[2025-10-13 11:05:25]  *** Listing of results directory ***
[2025-10-13 11:05:25] total 413272
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:14 pilot3.tar.gz
[2025-10-13 11:05:25] -rwx------ 1 boinc boinc     36292 Oct 12 08:16 runpilot2-wrapper.sh
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc      5112 Oct 12 08:16 queuedata.json
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:05:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:32 run_atlas
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:32 job.xml
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc      6420 Oct 13 07:32 init_data.xml
[2025-10-13 11:05:25] -rw-r--r-- 2 boinc boinc 224165377 Oct 13 07:32 EVNT.46676267._004336.pool.root.1
[2025-10-13 11:05:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:32 start_atlas.sh
[2025-10-13 11:05:25] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:32 shared
[2025-10-13 11:05:25] -rw-r--r-- 2 boinc boinc    569675 Oct 13 07:32 input.tar.gz
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:32 boinc_lockfile
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc      2549 Oct 13 07:32 pandaJob.out
[2025-10-13 11:05:25] -rw------- 1 boinc boinc    973230 Oct 13 07:33 agis_schedconf.cvmfs.json
[2025-10-13 11:05:25] drwx------ 5 boinc boinc      4096 Oct 13 07:33 pilot3
[2025-10-13 11:05:25] -rw------- 1 boinc boinc 191186765 Oct 13 10:40 HITS.46676269._072270.pool.root.1
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc       528 Oct 13 10:41 boinc_task_state.xml
[2025-10-13 11:05:25] -rw------- 1 boinc boinc      1047 Oct 13 10:41 memory_monitor_summary.json
[2025-10-13 11:05:25] -rw------- 1 boinc boinc   1560580 Oct 13 10:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:05:25] -rw------- 1 boinc boinc    351610 Oct 13 10:41 log.46676269._072270.job.log.tgz.1
[2025-10-13 11:05:25] -rw------- 1 boinc boinc      7835 Oct 13 10:41 heartbeat.json
[2025-10-13 11:05:25] -rw------- 1 boinc boinc        95 Oct 13 10:42 pilot_heartbeat.json
[2025-10-13 11:05:25] -rw------- 1 boinc boinc      4906 Oct 13 10:42 pilotlog.txt
[2025-10-13 11:05:25] -rw------- 1 boinc boinc   1618542 Oct 13 10:42 log.46676269._072270.job.log.1
[2025-10-13 11:05:25] -rw------- 1 boinc boinc       357 Oct 13 10:42 output.list
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:42 runtime_log
[2025-10-13 11:05:25] -rw------- 1 boinc boinc   1986560 Oct 13 10:42 result.tar.gz
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc      9070 Oct 13 10:42 runtime_log.err
[2025-10-13 11:05:25] -rw------- 1 boinc boinc       665 Oct 13 10:42 abLLDm5Y4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1niNDmpyXQQo.diag
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc        26 Oct 13 11:05 wrapper_checkpoint.txt
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:05 boinc_mmap_file
[2025-10-13 11:05:25] -rw-r--r-- 1 boinc boinc     20894 Oct 13 11:05 stderr.txt
[2025-10-13 11:05:25] HITS file was successfully produced:
[2025-10-13 11:05:25] -rw------- 1 boinc boinc 191186765 Oct 13 10:40 shared/HITS.pool.root.1
[2025-10-13 11:05:25]  *** Contents of shared directory: ***
[2025-10-13 11:05:25] total 408144
[2025-10-13 11:05:25] -rw-r--r-- 2 boinc boinc 224165377 Oct 13 07:32 ATLAS.root_0
[2025-10-13 11:05:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:32 start_atlas.sh
[2025-10-13 11:05:25] -rw-r--r-- 2 boinc boinc    569675 Oct 13 07:32 input.tar.gz
[2025-10-13 11:05:25] -rw------- 1 boinc boinc 191186765 Oct 13 10:40 HITS.pool.root.1
[2025-10-13 11:05:25] -rw------- 1 boinc boinc   1986560 Oct 13 10:42 result.tar.gz
11:05:27 (3512459): run_atlas exited; CPU time 44119.228749
11:05:27 (3512459): called boinc_finish(0)

</stderr_txt>
]]>

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