Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
10:24:43 (3727644): wrapper (7.7.26015): starting
10:24:43 (3727644): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:24:43] Arguments: --nthreads 4
[2025-10-12 10:24:43] Threads: 4
[2025-10-12 10:24:43] Checking for CVMFS
[2025-10-12 10:24:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:24:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:24:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:24:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:24:44] 2.12.7.0 2326568 4676 63676 151625 3 188 3694922 4096001 917 130560 0 6275804 99.985 157707 412 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 10:24:44] CVMFS is ok
[2025-10-12 10:24:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:24:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:24:44] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 10:24:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 10:24:44] Further information can be found at the LHC@home message board.
[2025-10-12 10:24:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:24:44] Checking for apptainer binary...
[2025-10-12 10:24:44] apptainer is not installed, using version from CVMFS
[2025-10-12 10:24:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:24:44] X570UD
[2025-10-12 10:24:44] apptainer works
[2025-10-12 10:24:44] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:24:44] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:24:44] Starting ATLAS job with PandaID=6839588800
[2025-10-12 10:24:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:06:26]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:06:26] 2025-10-12 18:05:46,491 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:06:26] 2025-10-12 18:05:46,792 | WARNING  | process 3738594 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 12:06:26] 2025-10-12 18:05:46,792 | INFO     | using path: /var/lib/boinc3/slots/1/PanDA_Pilot-6839588800/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:06:26] 2025-10-12 18:05:46,793 | INFO     | using path: /var/lib/boinc3/slots/1/PanDA_Pilot-6839588800/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:06:26] 2025-10-12 18:05:46,793 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-12 12:06:26] 2025-10-12 18:05:46,793 | WARNING  | maxPSS not found in memory monitor output
[2025-10-12 12:06:26] 2025-10-12 18:05:46,793 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2877922 B
[2025-10-12 12:06:26] 2025-10-12 18:05:46,793 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16297 B
[2025-10-12 12:06:26] 2025-10-12 18:05:46,793 | INFO     | executing command: df -mP /var/lib/boinc3/slots/1
[2025-10-12 12:06:26] 2025-10-12 18:05:46,815 | INFO     | sufficient remaining disk space (253032923136 B)
[2025-10-12 12:06:26] 2025-10-12 18:05:46,816 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 12:06:26] 2025-10-12 18:05:46,816 | INFO     | size of work directory /var/lib/boinc3/slots/1/PanDA_Pilot-6839588800: 3186352 B (within 2537553920 B limit)
[2025-10-12 12:06:26] 2025-10-12 18:05:46,816 | INFO     | pfn file=/var/lib/boinc3/slots/1/PanDA_Pilot-6839588800/HITS.46676269._071992.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 12:06:26] 2025-10-12 18:05:46,816 | INFO     | total size of present files: 0 B (workdir size: 3186352 B)
[2025-10-12 12:06:26] 2025-10-12 18:05:46,816 | INFO     | output file size check: skipping output file /var/lib/boinc3/slots/1/PanDA_Pilot-6839588800/HITS.46676269._071992.pool.root.1 since it does not exist
[2025-10-12 12:06:26] 2025-10-12 18:05:46,903 | INFO     | time since job start (6046s) is within the limit (172800.0s)
[2025-10-12 12:06:26] 2025-10-12 18:05:46,903 | INFO     | number of running child processes to parent process 3738594: 1
[2025-10-12 12:06:26] 2025-10-12 18:05:46,904 | INFO     | maximum number of monitored processes: 6
[2025-10-12 12:06:26] 2025-10-12 18:05:47,899 | INFO     | job 6839588800 has state=finished
[2025-10-12 12:06:26] 2025-10-12 18:05:47,899 | INFO     | preparing for final server update for job 6839588800 in state='finished'
[2025-10-12 12:06:26] 2025-10-12 18:05:47,899 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:06:26] 2025-10-12 18:05:47,900 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:06:26] 2025-10-12 18:05:47,900 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:06:26] 2025-10-12 18:05:47,900 | INFO     | job 6839588800 has finished - writing final server update
[2025-10-12 12:06:26] 2025-10-12 18:05:47,900 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:06:26] 2025-10-12 18:05:47,904 | INFO     | executing command: lscpu
[2025-10-12 12:06:26] 2025-10-12 18:05:47,945 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:06:26] 2025-10-12 18:05:48,909 | INFO     | time since job start (6048s) is within the limit (172800.0s)
[2025-10-12 12:06:26] 2025-10-12 18:05:49,407 | INFO     | monitor loop #459: job 0:6839588800 is in state 'finished'
[2025-10-12 12:06:26] 2025-10-12 18:05:49,407 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:06:26] 2025-10-12 18:05:50,916 | INFO     | time since job start (6050s) is within the limit (172800.0s)
[2025-10-12 12:06:26] 2025-10-12 18:05:51,910 | INFO     | monitor loop #460: job 0:6839588800 is in state 'finished'
[2025-10-12 12:06:26] 2025-10-12 18:05:51,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:06:26] 2025-10-12 18:05:52,921 | INFO     | time since job start (6052s) is within the limit (172800.0s)
[2025-10-12 12:06:26] 2025-10-12 18:05:53,485 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 12:06:26] 2025-10-12 18:05:53,488 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4207.224312500001
[2025-10-12 12:06:26] 2025-10-12 18:05:53,492 | INFO     | using path: /var/lib/boinc3/slots/1/PanDA_Pilot-6839588800/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:06:26] 2025-10-12 18:05:53,492 | INFO     | extracted standard info from prmon json
[2025-10-12 12:06:26] 2025-10-12 18:05:53,492 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:06:26] 2025-10-12 18:05:53,492 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:06:26] 2025-10-12 18:05:53,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:06:26] 2025-10-12 18:05:53,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:06:26] 2025-10-12 18:05:53,493 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:06:26] 2025-10-12 18:05:53,494 | INFO     | sum of square deviations: 241429643.0
[2025-10-12 12:06:26] 2025-10-12 18:05:53,494 | INFO     | sum of deviations: -188289676.0
[2025-10-12 12:06:26] 2025-10-12 18:05:53,494 | INFO     | mean x: 1760289408.5
[2025-10-12 12:06:26] 2025-10-12 18:05:53,494 | INFO     | mean y: 2332162.0
[2025-10-12 12:06:26] 2025-10-12 18:05:53,494 | INFO     | -- intersect: 1375172374.4700844
[2025-10-12 12:06:26] 2025-10-12 18:05:53,494 | INFO     | intersect: 1375172374.4700844
[2025-10-12 12:06:26] 2025-10-12 18:05:53,494 | INFO     | chi2: 0.011411715148185009
[2025-10-12 12:06:26] 2025-10-12 18:05:53,494 | INFO     | -- intersect: 1375172374.4700844
[2025-10-12 12:06:26] 2025-10-12 18:05:53,494 | INFO     | current memory leak: -0.78 B/s (using 92 data points, chi2=0.01)
[2025-10-12 12:06:26] 2025-10-12 18:05:53,495 | INFO     | could have reported an average CPU frequency of 4222 MHz (7 samples)
[2025-10-12 12:06:26] 2025-10-12 18:05:53,495 | INFO     | ..............................
[2025-10-12 12:06:26] 2025-10-12 18:05:53,495 | INFO     | . Timing measurements:
[2025-10-12 12:06:26] 2025-10-12 18:05:53,495 | INFO     | . get job = 0 s
[2025-10-12 12:06:26] 2025-10-12 18:05:53,495 | INFO     | . initial setup = 5 s
[2025-10-12 12:06:26] 2025-10-12 18:05:53,495 | INFO     | . payload setup = 7 s
[2025-10-12 12:06:26] 2025-10-12 18:05:53,495 | INFO     | . stage-in = 0 s
[2025-10-12 12:06:26] 2025-10-12 18:05:53,495 | INFO     | . payload execution = 6014 s
[2025-10-12 12:06:26] 2025-10-12 18:05:53,495 | INFO     | . stage-out = 0 s
[2025-10-12 12:06:26] 2025-10-12 18:05:53,495 | INFO     | . log creation = 0 s
[2025-10-12 12:06:26] 2025-10-12 18:05:53,495 | INFO     | ..............................
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | 
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | job summary report
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | --------------------------------------------------
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | PanDA job id: 6839588800
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | task id: 46676269
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | errors: (none)
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | pilot state: finished 
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | transexitcode: 0
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | exeerrorcode: 0
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | exeerrordiag: 
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | exitcode: 0
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | exitmsg: OK
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | cpuconsumptiontime: 23352 s
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | nevents: 400
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | neventsw: 0
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | pid: 3738594
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | pgrp: 3738594
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | corecount: 4
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | event service: False
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | sizes: {0: 2348858, 5: 2349120, 11: 2349176, 6025: 2375940, 6027: 2384940, 6030: 2384996, 6037: 2385346}
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | --------------------------------------------------
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | 
[2025-10-12 12:06:26] 2025-10-12 18:05:53,549 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/1
[2025-10-12 12:06:26] 2025-10-12 18:05:53,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,595 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,595 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,595 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | job 6839588800 has completed (purged errors)
[2025-10-12 12:06:26] 2025-10-12 18:05:53,596 | INFO     | overall cleanup function is called
[2025-10-12 12:06:26] 2025-10-12 18:05:54,603 | INFO     | --- collectZombieJob: --- 10, [3738594]
[2025-10-12 12:06:26] 2025-10-12 18:05:54,603 | INFO     | zombie collector waiting for pid 3738594
[2025-10-12 12:06:26] 2025-10-12 18:05:54,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:06:26] 2025-10-12 18:05:54,603 | INFO     | collected zombie processes
[2025-10-12 12:06:26] 2025-10-12 18:05:54,603 | INFO     | will attempt to kill all subprocesses of pid=3738594
[2025-10-12 12:06:26] 2025-10-12 18:05:54,691 | INFO     | process IDs to be killed: [3738594] (in reverse order)
[2025-10-12 12:06:26] 2025-10-12 18:05:54,758 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:06:26] 2025-10-12 18:05:54,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:06:26] 2025-10-12 18:05:54,761 | INFO     | did not find any defunct processes belonging to 3738594
[2025-10-12 12:06:26] 2025-10-12 18:05:54,763 | INFO     | did not find any defunct processes belonging to 3738594
[2025-10-12 12:06:26] 2025-10-12 18:05:54,763 | INFO     | ready for new job
[2025-10-12 12:06:26] 2025-10-12 18:05:54,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:06:26] 2025-10-12 18:05:54,764 | INFO     | ***************************************
[2025-10-12 12:06:26] 2025-10-12 18:05:54,764 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:06:26] 2025-10-12 18:05:54,764 | INFO     | ***************************************
[2025-10-12 12:06:26] 2025-10-12 18:05:54,764 | INFO     | 
[2025-10-12 12:06:26] 2025-10-12 18:05:54,765 | INFO     | architecture information:
[2025-10-12 12:06:26] 2025-10-12 18:05:54,765 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:06:26] 2025-10-12 18:05:54,783 | INFO     | cat /etc/os-release:
[2025-10-12 12:06:26] NAME="CentOS Linux"
[2025-10-12 12:06:26] VERSION="7 (Core)"
[2025-10-12 12:06:26] ID="centos"
[2025-10-12 12:06:26] ID_LIKE="rhel fedora"
[2025-10-12 12:06:26] VERSION_ID="7"
[2025-10-12 12:06:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:06:26] ANSI_COLOR="0;31"
[2025-10-12 12:06:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:06:26] HOME_URL="https://www.centos.org/"
[2025-10-12 12:06:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:06:26] 
[2025-10-12 12:06:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:06:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:06:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:06:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:06:26] 
[2025-10-12 12:06:26] 2025-10-12 18:05:54,784 | INFO     | ***************************************
[2025-10-12 12:06:26] 2025-10-12 18:05:55,286 | INFO     | executing command: df -mP /var/lib/boinc3/slots/1
[2025-10-12 12:06:26] 2025-10-12 18:05:55,310 | INFO     | sufficient remaining disk space (253036068864 B)
[2025-10-12 12:06:26] 2025-10-12 18:05:55,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:06:26] 2025-10-12 18:05:55,310 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:06:26] 2025-10-12 18:05:55,310 | INFO     | update_server=False
[2025-10-12 12:06:26] 2025-10-12 18:05:55,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:06:26] 2025-10-12 18:05:55,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:06:26] 2025-10-12 18:05:55,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:06:26] 2025-10-12 18:05:55,418 | INFO     | aborting loop
[2025-10-12 12:06:26] 2025-10-12 18:05:55,812 | INFO     | all payload control threads have been joined
[2025-10-12 12:06:26] 2025-10-12 18:05:56,112 | INFO     | all data control threads have been joined
[2025-10-12 12:06:26] 2025-10-12 18:05:56,315 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:56,315 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:56,322 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:56,423 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:56,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:06:26] 2025-10-12 18:05:56,761 | INFO     | [job] validate thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:56,817 | INFO     | [payload] control thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:56,841 | INFO     | all job control threads have been joined
[2025-10-12 12:06:26] 2025-10-12 18:05:56,960 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:56,965 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:57,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:06:26] 2025-10-12 18:05:57,117 | INFO     | [data] control thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:57,259 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:57,593 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:57,705 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:57,846 | INFO     | [job] control thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:05:58,620 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:06:01,058 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:06:05,568 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:06:26] 2025-10-12 18:06:06,573 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:06:26] 2025-10-12 18:06:09,755 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:06:26] 2025-10-12 18:06:09,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134544558626624)>', '<ExcThread(monitor, started 134543919007488)>']
[2025-10-12 12:06:26] 2025-10-12 18:06:14,877 | INFO     | all workflow threads have been joined
[2025-10-12 12:06:26] 2025-10-12 18:06:14,877 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:06:26] 2025-10-12 18:06:14,877 | INFO     | traces error code: 0
[2025-10-12 12:06:26] 2025-10-12 18:06:14,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:06:26] 2025-10-12 18:06:25,026 | INFO     | 6059s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 12:06:26] 2025-10-12 18:06:26,144 | INFO     | PID=3731602 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:06:26] 2025-10-12 18:06:26,144 | INFO     | .. there are 2 such processes running
[2025-10-12 12:06:26] 2025-10-12 18:06:26,144 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:06:26] 2025-10-12 18:06:26,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:06:26] 2025-10-12 18:06:26,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:06:26] 2025-10-12 18:06:26,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:06:26] 2025-10-12 18:06:26,144 | INFO     | [monitor] control thread has ended
[2025-10-12 12:06:26] 2025-10-12 18:06:26,279 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:06:26] 2025-10-12 18:06:26,284 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:06:26] 2025-10-12 18:06:26,287 [wrapper] pilotpid: 3731602
[2025-10-12 12:06:26] 2025-10-12 18:06:26,304 [wrapper] Pilot exit status: 0
[2025-10-12 12:06:26] 2025-10-12 18:06:26,322 [wrapper] pandaids: 6839588800
[2025-10-12 12:06:26] 2025-10-12 18:06:26,391 [wrapper] cleanup supervisor_pilot 3819485 3731603
[2025-10-12 12:06:26] 2025-10-12 18:06:26,393 [wrapper] Test setup, not cleaning
[2025-10-12 12:06:26] 2025-10-12 18:06:26,402 [wrapper] apfmon messages muted
[2025-10-12 12:06:26] 2025-10-12 18:06:26,413 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:06:26] 2025-10-12 18:06:26,414 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:06:26]  *** Error codes and diagnostics ***
[2025-10-12 12:06:26]     "exeErrorCode": 0,
[2025-10-12 12:06:26]     "exeErrorDiag": "",
[2025-10-12 12:06:26]     "pilotErrorCode": 0,
[2025-10-12 12:06:26]     "pilotErrorDiag": "",
[2025-10-12 12:06:26]  *** Listing of results directory ***
[2025-10-12 12:06:26] total 412820
[2025-10-12 12:06:26] -rw-r--r-- 1 boinc boinc    557409 Oct 11 23:26 pilot3.tar.gz
[2025-10-12 12:06:26] -rw-r--r-- 1 boinc boinc      5112 Oct 11 23:31 queuedata.json
[2025-10-12 12:06:26] -rwx------ 1 boinc boinc     36292 Oct 11 23:31 runpilot2-wrapper.sh
[2025-10-12 12:06:26] -rw-rw-r-- 1 boinc boinc       100 Oct 12 10:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:06:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:24 run_atlas
[2025-10-12 12:06:26] -rw-rw-r-- 1 boinc boinc       105 Oct 12 10:24 job.xml
[2025-10-12 12:06:26] -rw-rw-r-- 1 boinc boinc      9738 Oct 12 10:24 init_data.xml
[2025-10-12 12:06:26] -rw-r--r-- 2 boinc boinc 223059321 Oct 12 10:24 EVNT.46676267._004322.pool.root.1
[2025-10-12 12:06:26] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:24 shared
[2025-10-12 12:06:26] -rw-r--r-- 2 boinc boinc    569679 Oct 12 10:24 input.tar.gz
[2025-10-12 12:06:26] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:24 start_atlas.sh
[2025-10-12 12:06:26] -rw-rw-r-- 1 boinc boinc         0 Oct 12 10:24 boinc_lockfile
[2025-10-12 12:06:26] -rw-rw-r-- 1 boinc boinc      2550 Oct 12 10:24 pandaJob.out
[2025-10-12 12:06:26] -rw------- 1 boinc boinc    975528 Oct 12 10:24 agis_schedconf.cvmfs.json
[2025-10-12 12:06:26] -rw------- 1 boinc boinc   1560580 Oct 12 10:24 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:06:26] drwx------ 5 boinc boinc      4096 Oct 12 10:25 pilot3
[2025-10-12 12:06:26] -rw------- 1 boinc boinc 193367255 Oct 12 12:05 HITS.46676269._071992.pool.root.1
[2025-10-12 12:06:26] -rw-rw-r-- 1 boinc boinc       529 Oct 12 12:05 boinc_task_state.xml
[2025-10-12 12:06:26] -rw------- 1 boinc boinc      1031 Oct 12 12:05 memory_monitor_summary.json
[2025-10-12 12:06:26] -rw------- 1 boinc boinc    302151 Oct 12 12:05 log.46676269._071992.job.log.tgz.1
[2025-10-12 12:06:26] -rw------- 1 boinc boinc        95 Oct 12 12:05 pilot_heartbeat.json
[2025-10-12 12:06:26] -rw------- 1 boinc boinc      7765 Oct 12 12:05 heartbeat.json
[2025-10-12 12:06:26] -rw-rw-r-- 1 boinc boinc      8192 Oct 12 12:06 boinc_mmap_file
[2025-10-12 12:06:26] -rw-rw-r-- 1 boinc boinc        27 Oct 12 12:06 wrapper_checkpoint.txt
[2025-10-12 12:06:26] -rw------- 1 boinc boinc       937 Oct 12 12:06 pilotlog.txt
[2025-10-12 12:06:26] -rw------- 1 boinc boinc    894531 Oct 12 12:06 log.46676269._071992.job.log.1
[2025-10-12 12:06:26] -rw------- 1 boinc boinc       357 Oct 12 12:06 output.list
[2025-10-12 12:06:26] -rw-rw-r-- 1 boinc boinc       620 Oct 12 12:06 runtime_log
[2025-10-12 12:06:26] -rw------- 1 boinc boinc   1218560 Oct 12 12:06 result.tar.gz
[2025-10-12 12:06:26] -rw------- 1 boinc boinc       658 Oct 12 12:06 uUQKDm4q3R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCJTMDmFmLu6m.diag
[2025-10-12 12:06:26] -rw-rw-r-- 1 boinc boinc      8699 Oct 12 12:06 runtime_log.err
[2025-10-12 12:06:26] -rw-rw-r-- 1 boinc boinc     22617 Oct 12 12:06 stderr.txt
[2025-10-12 12:06:26] HITS file was successfully produced:
[2025-10-12 12:06:26] -rw------- 1 boinc boinc 193367255 Oct 12 12:05 shared/HITS.pool.root.1
[2025-10-12 12:06:26]  *** Contents of shared directory: ***
[2025-10-12 12:06:26] total 408444
[2025-10-12 12:06:26] -rw-r--r-- 2 boinc boinc 223059321 Oct 12 10:24 ATLAS.root_0
[2025-10-12 12:06:26] -rw-r--r-- 2 boinc boinc    569679 Oct 12 10:24 input.tar.gz
[2025-10-12 12:06:26] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:24 start_atlas.sh
[2025-10-12 12:06:26] -rw------- 1 boinc boinc 193367255 Oct 12 12:05 HITS.pool.root.1
[2025-10-12 12:06:26] -rw------- 1 boinc boinc   1218560 Oct 12 12:06 result.tar.gz
12:06:27 (3727644): run_atlas exited; CPU time 23385.740001
12:06:27 (3727644): called boinc_finish(0)

</stderr_txt>
]]>

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