Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:13:21 (27534): wrapper (7.7.26015): starting
07:13:21 (27534): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 07:13:21] Arguments: --nthreads 12
[2025-10-12 07:13:21] Threads: 12
[2025-10-12 07:13:21] Checking for CVMFS
[2025-10-12 07:13:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:13:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:13:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:13:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:13:21] 2.11.2.0 2924 222760 104624 151618 2 56 15261781 20275201 1 130560 4 109917275 99.984 13793431 12955 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:13:21] CVMFS is ok
[2025-10-12 07:13:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:13:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:13:21] Further information can be found at the LHC@home message board.
[2025-10-12 07:13:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:13:21] Checking for apptainer binary...
[2025-10-12 07:13:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:13:21] Running /usr/bin/apptainer --version
[2025-10-12 07:13:21] apptainer version 1.3.2-1.el7
[2025-10-12 07:13:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:13:23] c-205-28.aglt2.org
[2025-10-12 07:13:23] apptainer works
[2025-10-12 07:13:23] Set ATHENA_PROC_NUMBER=12
[2025-10-12 07:13:23] Set ATHENA_CORE_NUMBER=12
[2025-10-12 07:13:23] Starting ATLAS job with PandaID=6839590751
[2025-10-12 07:13:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:27:50]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:27:50]  status_code=0
[2025-10-12 08:27:50]  storage_token=
[2025-10-12 08:27:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839590751/log.46676269._072320.job.log.tgz.1
[2025-10-12 08:27:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/6f/log.46676269._072320.job.log.tgz.1
[2025-10-12 08:27:50]  workdir=None
[2025-10-12 08:27:50] ]
[2025-10-12 08:27:50] 2025-10-12 12:26:59,453 | INFO     | transferring file log.46676269._072320.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839590751/log.46676269._072320.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 08:27:50] 2025-10-12 12:26:59,453 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839590751/log.46676269._072320.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._072320.job
[2025-10-12 08:27:50] 2025-10-12 12:26:59,475 | INFO     | adding to output.list: log.46676269._072320.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/6f/log.46676269._072320.job.log.tg
[2025-10-12 08:27:50] 2025-10-12 12:26:59,476 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 08:27:50] 2025-10-12 12:26:59,477 | INFO     | summary of transferred files:
[2025-10-12 08:27:50] 2025-10-12 12:26:59,477 | INFO     |  -- lfn=log.46676269._072320.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 08:27:50] 2025-10-12 12:26:59,477 | INFO     | stage-out finished correctly
[2025-10-12 08:27:50] 2025-10-12 12:26:59,933 | INFO     | monitor loop #327: job 0:6839590751 is in state 'finished'
[2025-10-12 08:27:50] 2025-10-12 12:26:59,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:27:50] 2025-10-12 12:27:00,760 | INFO     | time since job start (4402s) is within the limit (172800.0s)
[2025-10-12 08:27:50] 2025-10-12 12:27:02,035 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 08:27:50] 2025-10-12 12:27:02,436 | INFO     | monitor loop #328: job 0:6839590751 is in state 'finished'
[2025-10-12 08:27:50] 2025-10-12 12:27:02,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:27:50] 2025-10-12 12:27:02,765 | INFO     | time since job start (4404s) is within the limit (172800.0s)
[2025-10-12 08:27:50] 2025-10-12 12:27:04,607 | INFO     | job 6839590751 has state=finished
[2025-10-12 08:27:50] 2025-10-12 12:27:04,607 | INFO     | preparing for final server update for job 6839590751 in state='finished'
[2025-10-12 08:27:50] 2025-10-12 12:27:04,608 | INFO     | this job has now completed (state=finished)
[2025-10-12 08:27:50] 2025-10-12 12:27:04,608 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 08:27:50] 2025-10-12 12:27:04,608 | INFO     | log transfer has been attempted: DONE
[2025-10-12 08:27:50] 2025-10-12 12:27:04,608 | INFO     | job 6839590751 has finished - writing final server update
[2025-10-12 08:27:50] 2025-10-12 12:27:04,609 | INFO     | total number of processed events: 400 (read)
[2025-10-12 08:27:50] 2025-10-12 12:27:04,610 | INFO     | executing command: lscpu
[2025-10-12 08:27:50] 2025-10-12 12:27:04,638 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 08:27:50] 2025-10-12 12:27:04,771 | INFO     | time since job start (4406s) is within the limit (172800.0s)
[2025-10-12 08:27:50] 2025-10-12 12:27:04,940 | INFO     | monitor loop #329: job 0:6839590751 is in state 'finished'
[2025-10-12 08:27:50] 2025-10-12 12:27:04,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:27:50] 2025-10-12 12:27:06,776 | INFO     | time since job start (4408s) is within the limit (172800.0s)
[2025-10-12 08:27:50] 2025-10-12 12:27:07,443 | INFO     | monitor loop #330: job 0:6839590751 is in state 'finished'
[2025-10-12 08:27:50] 2025-10-12 12:27:07,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:27:50] 2025-10-12 12:27:08,782 | INFO     | time since job start (4410s) is within the limit (172800.0s)
[2025-10-12 08:27:50] 2025-10-12 12:27:09,395 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 08:27:50] 2025-10-12 12:27:09,399 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 08:27:50] 2025-10-12 12:27:09,401 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839590751/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:27:50] 2025-10-12 12:27:09,402 | INFO     | extracted standard info from prmon json
[2025-10-12 08:27:50] 2025-10-12 12:27:09,402 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:27:50] 2025-10-12 12:27:09,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:27:50] 2025-10-12 12:27:09,403 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:27:50] 2025-10-12 12:27:09,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:27:50] 2025-10-12 12:27:09,405 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:27:50] 2025-10-12 12:27:09,405 | INFO     | sum of square deviations: 85136480.0
[2025-10-12 08:27:50] 2025-10-12 12:27:09,405 | INFO     | sum of deviations: 1374997889.0
[2025-10-12 08:27:50] 2025-10-12 12:27:09,405 | INFO     | mean x: 1760269904.0
[2025-10-12 08:27:50] 2025-10-12 12:27:09,405 | INFO     | mean y: 2727053.846153846
[2025-10-12 08:27:50] 2025-10-12 12:27:09,406 | INFO     | -- intersect: -28426536195.823467
[2025-10-12 08:27:50] 2025-10-12 12:27:09,406 | INFO     | intersect: -28426536195.823467
[2025-10-12 08:27:50] 2025-10-12 12:27:09,406 | INFO     | chi2: 0.04273855543718789
[2025-10-12 08:27:50] 2025-10-12 12:27:09,406 | INFO     | -- intersect: -28426536195.823467
[2025-10-12 08:27:50] 2025-10-12 12:27:09,406 | INFO     | current memory leak: 16.15 B/s (using 65 data points, chi2=0.04)
[2025-10-12 08:27:50] 2025-10-12 12:27:09,406 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-10-12 08:27:50] 2025-10-12 12:27:09,407 | INFO     | ..............................
[2025-10-12 08:27:50] 2025-10-12 12:27:09,407 | INFO     | . Timing measurements:
[2025-10-12 08:27:50] 2025-10-12 12:27:09,407 | INFO     | . get job = 0 s
[2025-10-12 08:27:50] 2025-10-12 12:27:09,407 | INFO     | . initial setup = 2 s
[2025-10-12 08:27:50] 2025-10-12 12:27:09,407 | INFO     | . payload setup = 6 s
[2025-10-12 08:27:50] 2025-10-12 12:27:09,407 | INFO     | . stage-in = 0 s
[2025-10-12 08:27:50] 2025-10-12 12:27:09,407 | INFO     | . payload execution = 4373 s
[2025-10-12 08:27:50] 2025-10-12 12:27:09,407 | INFO     | . stage-out = 0 s
[2025-10-12 08:27:50] 2025-10-12 12:27:09,407 | INFO     | . log creation = 0 s
[2025-10-12 08:27:50] 2025-10-12 12:27:09,408 | INFO     | ..............................
[2025-10-12 08:27:50] 2025-10-12 12:27:09,722 | INFO     | 
[2025-10-12 08:27:50] 2025-10-12 12:27:09,722 | INFO     | job summary report
[2025-10-12 08:27:50] 2025-10-12 12:27:09,722 | INFO     | --------------------------------------------------
[2025-10-12 08:27:50] 2025-10-12 12:27:09,722 | INFO     | PanDA job id: 6839590751
[2025-10-12 08:27:50] 2025-10-12 12:27:09,722 | INFO     | task id: 46676269
[2025-10-12 08:27:50] 2025-10-12 12:27:09,723 | INFO     | errors: (none)
[2025-10-12 08:27:50] 2025-10-12 12:27:09,723 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:27:50] 2025-10-12 12:27:09,723 | INFO     | pilot state: finished 
[2025-10-12 08:27:50] 2025-10-12 12:27:09,723 | INFO     | transexitcode: 0
[2025-10-12 08:27:50] 2025-10-12 12:27:09,723 | INFO     | exeerrorcode: 0
[2025-10-12 08:27:50] 2025-10-12 12:27:09,723 | INFO     | exeerrordiag: 
[2025-10-12 08:27:50] 2025-10-12 12:27:09,723 | INFO     | exitcode: 0
[2025-10-12 08:27:50] 2025-10-12 12:27:09,724 | INFO     | exitmsg: OK
[2025-10-12 08:27:50] 2025-10-12 12:27:09,724 | INFO     | cpuconsumptiontime: 46902 s
[2025-10-12 08:27:50] 2025-10-12 12:27:09,724 | INFO     | nevents: 400
[2025-10-12 08:27:50] 2025-10-12 12:27:09,724 | INFO     | neventsw: 0
[2025-10-12 08:27:50] 2025-10-12 12:27:09,724 | INFO     | pid: 7026
[2025-10-12 08:27:50] 2025-10-12 12:27:09,724 | INFO     | pgrp: 7026
[2025-10-12 08:27:50] 2025-10-12 12:27:09,725 | INFO     | corecount: 12
[2025-10-12 08:27:50] 2025-10-12 12:27:09,725 | INFO     | event service: False
[2025-10-12 08:27:50] 2025-10-12 12:27:09,725 | INFO     | sizes: {0: 2348855, 5: 2349117, 11: 2349173, 4383: 2375248, 4385: 2384246, 4387: 2384302, 4395: 2384624}
[2025-10-12 08:27:50] 2025-10-12 12:27:09,725 | INFO     | --------------------------------------------------
[2025-10-12 08:27:50] 2025-10-12 12:27:09,725 | INFO     | 
[2025-10-12 08:27:50] 2025-10-12 12:27:09,725 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 08:27:50] 2025-10-12 12:27:09,747 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,748 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:27:50] 2025-10-12 12:27:09,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:27:50] 2025-10-12 12:27:09,751 | INFO     | job 6839590751 has completed (purged errors)
[2025-10-12 08:27:50] 2025-10-12 12:27:09,751 | INFO     | overall cleanup function is called
[2025-10-12 08:27:50] 2025-10-12 12:27:10,759 | INFO     | --- collectZombieJob: --- 10, [7026]
[2025-10-12 08:27:50] 2025-10-12 12:27:10,759 | INFO     | zombie collector waiting for pid 7026
[2025-10-12 08:27:50] 2025-10-12 12:27:10,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:27:50] 2025-10-12 12:27:10,759 | INFO     | collected zombie processes
[2025-10-12 08:27:50] 2025-10-12 12:27:10,759 | INFO     | will attempt to kill all subprocesses of pid=7026
[2025-10-12 08:27:50] 2025-10-12 12:27:10,854 | INFO     | process IDs to be killed: [7026] (in reverse order)
[2025-10-12 08:27:50] 2025-10-12 12:27:10,908 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:27:50] 2025-10-12 12:27:10,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:27:50] 2025-10-12 12:27:10,912 | INFO     | did not find any defunct processes belonging to 7026
[2025-10-12 08:27:50] 2025-10-12 12:27:10,915 | INFO     | did not find any defunct processes belonging to 7026
[2025-10-12 08:27:50] 2025-10-12 12:27:10,916 | INFO     | ready for new job
[2025-10-12 08:27:50] 2025-10-12 12:27:10,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:27:50] 2025-10-12 12:27:10,917 | INFO     | ***************************************
[2025-10-12 08:27:50] 2025-10-12 12:27:10,917 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:27:50] 2025-10-12 12:27:10,917 | INFO     | ***************************************
[2025-10-12 08:27:50] 2025-10-12 12:27:10,917 | INFO     | 
[2025-10-12 08:27:50] 2025-10-12 12:27:10,918 | INFO     | architecture information:
[2025-10-12 08:27:50] 2025-10-12 12:27:10,919 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:27:50] 2025-10-12 12:27:10,935 | INFO     | cat /etc/os-release:
[2025-10-12 08:27:50] NAME="CentOS Linux"
[2025-10-12 08:27:50] VERSION="7 (Core)"
[2025-10-12 08:27:50] ID="centos"
[2025-10-12 08:27:50] ID_LIKE="rhel fedora"
[2025-10-12 08:27:50] VERSION_ID="7"
[2025-10-12 08:27:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:27:50] ANSI_COLOR="0;31"
[2025-10-12 08:27:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:27:50] HOME_URL="https://www.centos.org/"
[2025-10-12 08:27:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:27:50] 
[2025-10-12 08:27:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:27:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:27:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:27:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:27:50] 
[2025-10-12 08:27:50] 2025-10-12 12:27:10,936 | INFO     | ***************************************
[2025-10-12 08:27:50] 2025-10-12 12:27:11,437 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 08:27:50] 2025-10-12 12:27:11,454 | INFO     | sufficient remaining disk space (29355933696 B)
[2025-10-12 08:27:50] 2025-10-12 12:27:11,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:27:50] 2025-10-12 12:27:11,455 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:27:50] 2025-10-12 12:27:11,455 | INFO     | update_server=False
[2025-10-12 08:27:50] 2025-10-12 12:27:11,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:27:50] 2025-10-12 12:27:11,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:27:50] 2025-10-12 12:27:11,455 | INFO     | aborting loop
[2025-10-12 08:27:50] 2025-10-12 12:27:11,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:27:50] 2025-10-12 12:27:11,848 | INFO     | all data control threads have been joined
[2025-10-12 08:27:50] 2025-10-12 12:27:12,207 | INFO     | all payload control threads have been joined
[2025-10-12 08:27:50] 2025-10-12 12:27:12,460 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:12,461 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:12,461 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:12,485 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:12,529 | INFO     | [job] validate thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:12,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:27:50] 2025-10-12 12:27:12,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:27:50] 2025-10-12 12:27:12,710 | INFO     | all job control threads have been joined
[2025-10-12 08:27:50] 2025-10-12 12:27:12,727 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:12,854 | INFO     | [data] control thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:13,133 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:13,136 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:13,212 | INFO     | [payload] control thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:13,226 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:13,641 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:13,715 | INFO     | [job] control thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:14,587 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:16,636 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:22,336 | INFO     | job.realtimelogging is not enabled
[2025-10-12 08:27:50] 2025-10-12 12:27:23,341 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:27:50] 2025-10-12 12:27:41,985 | INFO     | PID=31211 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 08:27:50] 2025-10-12 12:27:41,986 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:27:50] 2025-10-12 12:27:41,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:27:50] 2025-10-12 12:27:41,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:27:50] 2025-10-12 12:27:44,816 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:27:50] 2025-10-12 12:27:45,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073591973696)>', '<ExcThread(monitor, started 140072682768128)>']
[2025-10-12 08:27:50] 2025-10-12 12:27:46,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:27:50] 2025-10-12 12:27:46,007 | INFO     | [monitor] control thread has ended
[2025-10-12 08:27:50] 2025-10-12 12:27:50,046 | INFO     | all workflow threads have been joined
[2025-10-12 08:27:50] 2025-10-12 12:27:50,046 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:27:50] 2025-10-12 12:27:50,047 | INFO     | traces error code: 0
[2025-10-12 08:27:50] 2025-10-12 12:27:50,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:27:50] 2025-10-12 12:27:50,145 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:27:50] 2025-10-12 12:27:50,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:27:50] 2025-10-12 12:27:50,151 [wrapper] pilotpid: 31211
[2025-10-12 08:27:50] 2025-10-12 12:27:50,155 [wrapper] Pilot exit status: 0
[2025-10-12 08:27:50] 2025-10-12 12:27:50,170 [wrapper] pandaids: 6839590751
[2025-10-12 08:27:50] 2025-10-12 12:27:50,215 [wrapper] cleanup supervisor_pilot 15099 31212
[2025-10-12 08:27:50] 2025-10-12 12:27:50,218 [wrapper] Test setup, not cleaning
[2025-10-12 08:27:50] 2025-10-12 12:27:50,222 [wrapper] apfmon messages muted
[2025-10-12 08:27:50] 2025-10-12 12:27:50,226 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:27:50] 2025-10-12 12:27:50,230 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:27:50]  *** Error codes and diagnostics ***
[2025-10-12 08:27:50]     "exeErrorCode": 0,
[2025-10-12 08:27:50]     "exeErrorDiag": "",
[2025-10-12 08:27:50]     "pilotErrorCode": 0,
[2025-10-12 08:27:50]     "pilotErrorDiag": "",
[2025-10-12 08:27:50]  *** Listing of results directory ***
[2025-10-12 08:27:50] total 418240
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:14 pilot3.tar.gz
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:16 queuedata.json
[2025-10-12 08:27:50] -rwx------ 1 boincer umatlas     36292 Oct 12 02:17 runpilot2-wrapper.sh
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas       100 Oct 12 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:27:50] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 07:13 run_atlas
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas       105 Oct 12 07:13 job.xml
[2025-10-12 08:27:50] -rw-r--r-- 2 boincer umatlas 223184082 Oct 12 07:13 EVNT.46676267._004342.pool.root.1
[2025-10-12 08:27:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:13 start_atlas.sh
[2025-10-12 08:27:50] drwxrwx--x 2 boincer umatlas      4096 Oct 12 07:13 shared
[2025-10-12 08:27:50] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 07:13 input.tar.gz
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas         0 Oct 12 07:13 boinc_lockfile
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 07:13 pandaJob.out
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas    975520 Oct 12 07:13 agis_schedconf.cvmfs.json
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas   1560580 Oct 12 07:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:27:50] drwx------ 5 boincer umatlas      4096 Oct 12 07:13 pilot3
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 08:18 init_data.xml
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas 199177056 Oct 12 08:26 HITS.46676269._072320.pool.root.1
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas       529 Oct 12 08:26 boinc_task_state.xml
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas      1048 Oct 12 08:26 memory_monitor_summary.json
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas    368421 Oct 12 08:26 log.46676269._072320.job.log.tgz.1
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas      7852 Oct 12 08:27 heartbeat.json
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas        95 Oct 12 08:27 pilot_heartbeat.json
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 08:27 boinc_mmap_file
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas        27 Oct 12 08:27 wrapper_checkpoint.txt
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas      4818 Oct 12 08:27 pilotlog.txt
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas    639874 Oct 12 08:27 log.46676269._072320.job.log.1
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas       357 Oct 12 08:27 output.list
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas       620 Oct 12 08:27 runtime_log
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas   1024000 Oct 12 08:27 result.tar.gz
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 08:27 runtime_log.err
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas       659 Oct 12 08:27 oFxNDmDa4R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkKTMDmtDa4cm.diag
[2025-10-12 08:27:50] -rw-r--r-- 1 boincer umatlas     22073 Oct 12 08:27 stderr.txt
[2025-10-12 08:27:50] HITS file was successfully produced:
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas 199177056 Oct 12 08:26 shared/HITS.pool.root.1
[2025-10-12 08:27:50]  *** Contents of shared directory: ***
[2025-10-12 08:27:50] total 414048
[2025-10-12 08:27:50] -rw-r--r-- 2 boincer umatlas 223184082 Oct 12 07:13 ATLAS.root_0
[2025-10-12 08:27:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:13 start_atlas.sh
[2025-10-12 08:27:50] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 07:13 input.tar.gz
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas 199177056 Oct 12 08:26 HITS.pool.root.1
[2025-10-12 08:27:50] -rw------- 1 boincer umatlas   1024000 Oct 12 08:27 result.tar.gz
08:27:51 (27534): run_atlas exited; CPU time 46873.574415
08:27:51 (27534): called boinc_finish(0)

</stderr_txt>
]]>

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