Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:06:59 (3915617): wrapper (7.7.26015): starting
07:06:59 (3915617): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 07:06:59] Arguments: --nthreads 9
[2025-10-12 07:06:59] Threads: 9
[2025-10-12 07:06:59] Checking for CVMFS
[2025-10-12 07:06:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:07:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:07:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:07:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:07:01] 2.13.2.0 126724 124960 306344 151618 2 190 19803869 32935936 40014 16776704 1 291204759 99.673 266036506 20707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 07:07:01] CVMFS is ok
[2025-10-12 07:07:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:07:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:07:01] Further information can be found at the LHC@home message board.
[2025-10-12 07:07:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:07:01] Checking for apptainer binary...
[2025-10-12 07:07:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:07:01] Running /usr/bin/apptainer --version
[2025-10-12 07:07:01] apptainer version 1.4.3-1.el9
[2025-10-12 07:07:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:07:01] c6-12-27-3.aglt2.org
[2025-10-12 07:07:01] apptainer works
[2025-10-12 07:07:01] Set ATHENA_PROC_NUMBER=9
[2025-10-12 07:07:01] Set ATHENA_CORE_NUMBER=9
[2025-10-12 07:07:01] Starting ATLAS job with PandaID=6839591050
[2025-10-12 07:07:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:20:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:20:32] 2025-10-12 17:19:51,103 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:20:32] 2025-10-12 17:19:51,104 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:20:32] 2025-10-12 17:19:51,191 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:20:32] 2025-10-12 17:19:51,192 | INFO     | sum of square deviations: 14954574529.725239
[2025-10-12 13:20:32] 2025-10-12 17:19:51,207 | INFO     | sum of deviations: 177843623642.95053
[2025-10-12 13:20:32] 2025-10-12 17:19:51,208 | INFO     | mean x: 1760278437.0274725
[2025-10-12 13:20:32] 2025-10-12 17:19:51,208 | INFO     | mean y: 2113685.304945055
[2025-10-12 13:20:32] 2025-10-12 17:19:51,208 | INFO     | -- intersect: -20931567526.370876
[2025-10-12 13:20:32] 2025-10-12 17:19:51,208 | INFO     | intersect: -20931567526.370876
[2025-10-12 13:20:32] 2025-10-12 17:19:51,209 | INFO     | chi2: 6.104215344590558
[2025-10-12 13:20:32] 2025-10-12 17:19:51,223 | INFO     | sum of square deviations: 14346789133.314726
[2025-10-12 13:20:32] 2025-10-12 17:19:51,248 | INFO     | sum of deviations: 217757576800.3813
[2025-10-12 13:20:32] 2025-10-12 17:19:51,248 | INFO     | mean x: 1760278284.534819
[2025-10-12 13:20:32] 2025-10-12 17:19:51,248 | INFO     | mean y: 2123616.409470752
[2025-10-12 13:20:32] 2025-10-12 17:19:51,249 | INFO     | -- intersect: -26715626966.857952
[2025-10-12 13:20:32] 2025-10-12 17:19:51,249 | INFO     | intersect: -26715626966.857952
[2025-10-12 13:20:32] 2025-10-12 17:19:51,249 | INFO     | chi2: 4.616651490538584
[2025-10-12 13:20:32] 2025-10-12 17:19:51,250 | INFO     | current chi2=4.616651490538584 (change=24.369452420616604 %)
[2025-10-12 13:20:32] 2025-10-12 17:19:51,250 | INFO     | right removable region: 358
[2025-10-12 13:20:32] 2025-10-12 17:19:51,250 | INFO     | sum of square deviations: 14346672013.314726
[2025-10-12 13:20:32] 2025-10-12 17:19:51,267 | INFO     | sum of deviations: 91420109035.41783
[2025-10-12 13:20:32] 2025-10-12 17:19:51,267 | INFO     | mean x: 1760278589.534819
[2025-10-12 13:20:32] 2025-10-12 17:19:51,268 | INFO     | mean y: 2135336.9665738163
[2025-10-12 13:20:32] 2025-10-12 17:19:51,268 | INFO     | -- intersect: -11214742029.34075
[2025-10-12 13:20:32] 2025-10-12 17:19:51,268 | INFO     | intersect: -11214742029.34075
[2025-10-12 13:20:32] 2025-10-12 17:19:51,268 | INFO     | chi2: 3.2167121564241823
[2025-10-12 13:20:32] 2025-10-12 17:19:51,280 | INFO     | current chi2=3.2167121564241823 (change=47.30342927244903 %)
[2025-10-12 13:20:32] 2025-10-12 17:19:51,281 | INFO     | sum of square deviations: 13755467484.364422
[2025-10-12 13:20:32] 2025-10-12 17:19:51,291 | INFO     | sum of deviations: 40557610418.66104
[2025-10-12 13:20:32] 2025-10-12 17:19:51,291 | INFO     | mean x: 1760278742.042373
[2025-10-12 13:20:32] 2025-10-12 17:19:51,291 | INFO     | mean y: 2148449.02259887
[2025-10-12 13:20:32] 2025-10-12 17:19:51,291 | INFO     | -- intersect: -5187984094.938994
[2025-10-12 13:20:32] 2025-10-12 17:19:51,291 | INFO     | intersect: -5187984094.938994
[2025-10-12 13:20:32] 2025-10-12 17:19:51,342 | INFO     | chi2: 2.2931839356264434
[2025-10-12 13:20:32] 2025-10-12 17:19:51,343 | INFO     | current chi2=2.2931839356264434 (change=28.710315871854924 %)
[2025-10-12 13:20:32] 2025-10-12 17:19:51,343 | INFO     | sum of square deviations: 13180749852.469862
[2025-10-12 13:20:32] 2025-10-12 17:19:51,367 | INFO     | sum of deviations: 5280585219.174786
[2025-10-12 13:20:32] 2025-10-12 17:19:51,368 | INFO     | mean x: 1760278894.547278
[2025-10-12 13:20:32] 2025-10-12 17:19:51,368 | INFO     | mean y: 2157795.8681948422
[2025-10-12 13:20:32] 2025-10-12 17:19:51,368 | INFO     | -- intersect: -703060254.4106288
[2025-10-12 13:20:32] 2025-10-12 17:19:51,368 | INFO     | intersect: -703060254.4106288
[2025-10-12 13:20:32] 2025-10-12 17:19:51,369 | INFO     | chi2: 1.8332808699803782
[2025-10-12 13:20:32] 2025-10-12 17:19:51,369 | INFO     | current chi2=1.8332808699803782 (change=20.055219230394208 %)
[2025-10-12 13:20:32] 2025-10-12 17:19:51,369 | INFO     | left removable region: 30
[2025-10-12 13:20:32] 2025-10-12 17:19:51,369 | INFO     | sum of square deviations: 10941686406.780561
[2025-10-12 13:20:32] 2025-10-12 17:19:51,394 | INFO     | sum of deviations: 24314991104.792683
[2025-10-12 13:20:32] 2025-10-12 17:19:51,395 | INFO     | mean x: 1760279169.0609756
[2025-10-12 13:20:32] 2025-10-12 17:19:51,395 | INFO     | mean y: 2174803.7103658537
[2025-10-12 13:20:32] 2025-10-12 17:19:51,395 | INFO     | -- intersect: -3909577987.079324
[2025-10-12 13:20:32] 2025-10-12 17:19:51,395 | INFO     | intersect: -3909577987.079324
[2025-10-12 13:20:32] 2025-10-12 17:19:51,395 | INFO     | chi2: 0.16254387684499158
[2025-10-12 13:20:32] 2025-10-12 17:19:51,396 | INFO     | -- intersect: -3909577987.079324
[2025-10-12 13:20:32] 2025-10-12 17:19:51,396 | INFO     | current memory leak: 2.22 B/s (using 328 data points, chi2=0.16)
[2025-10-12 13:20:32] 2025-10-12 17:19:51,396 | INFO     | could have reported an average CPU frequency of 2611 MHz (16 samples)
[2025-10-12 13:20:32] 2025-10-12 17:19:51,397 | INFO     | ..............................
[2025-10-12 13:20:32] 2025-10-12 17:19:51,397 | INFO     | . Timing measurements:
[2025-10-12 13:20:32] 2025-10-12 17:19:51,419 | INFO     | . get job = 0 s
[2025-10-12 13:20:32] 2025-10-12 17:19:51,419 | INFO     | . initial setup = 4 s
[2025-10-12 13:20:32] 2025-10-12 17:19:51,419 | INFO     | . payload setup = 24 s
[2025-10-12 13:20:32] 2025-10-12 17:19:51,419 | INFO     | . stage-in = 0 s
[2025-10-12 13:20:32] 2025-10-12 17:19:51,419 | INFO     | . payload execution = 22196 s
[2025-10-12 13:20:32] 2025-10-12 17:19:51,420 | INFO     | . stage-out = 7 s
[2025-10-12 13:20:32] 2025-10-12 17:19:51,420 | INFO     | . log creation = 0 s
[2025-10-12 13:20:32] 2025-10-12 17:19:51,420 | INFO     | ..............................
[2025-10-12 13:20:32] 2025-10-12 17:19:51,747 | INFO     | time since job start (22328s) is within the limit (172800.0s)
[2025-10-12 13:20:32] 2025-10-12 17:19:52,078 | INFO     | 
[2025-10-12 13:20:32] 2025-10-12 17:19:52,078 | INFO     | job summary report
[2025-10-12 13:20:32] 2025-10-12 17:19:52,078 | INFO     | --------------------------------------------------
[2025-10-12 13:20:32] 2025-10-12 17:19:52,078 | INFO     | PanDA job id: 6839591050
[2025-10-12 13:20:32] 2025-10-12 17:19:52,078 | INFO     | task id: 46676269
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | errors: (none)
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | pilot state: finished 
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | transexitcode: 0
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | exeerrorcode: 0
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | exeerrordiag: 
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | exitcode: 0
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | exitmsg: OK
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | cpuconsumptiontime: 51081 s
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | nevents: 400
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | neventsw: 0
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | pid: 3941091
[2025-10-12 13:20:32] 2025-10-12 17:19:52,079 | INFO     | pgrp: 3941091
[2025-10-12 13:20:32] 2025-10-12 17:19:52,080 | INFO     | corecount: 9
[2025-10-12 13:20:32] 2025-10-12 17:19:52,080 | INFO     | event service: False
[2025-10-12 13:20:32] 2025-10-12 17:19:52,080 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2349203, 34: 2349203, 22225: 2383257, 22233: 2392311, 22276: 2392449}
[2025-10-12 13:20:32] 2025-10-12 17:19:52,080 | INFO     | --------------------------------------------------
[2025-10-12 13:20:32] 2025-10-12 17:19:52,080 | INFO     | 
[2025-10-12 13:20:32] 2025-10-12 17:19:52,080 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 13:20:32] 2025-10-12 17:19:52,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:20:32] 2025-10-12 17:19:52,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:20:32] 2025-10-12 17:19:52,213 | INFO     | job 6839591050 has completed (purged errors)
[2025-10-12 13:20:32] 2025-10-12 17:19:52,213 | INFO     | overall cleanup function is called
[2025-10-12 13:20:32] 2025-10-12 17:19:53,226 | INFO     | --- collectZombieJob: --- 10, [3941091]
[2025-10-12 13:20:32] 2025-10-12 17:19:53,226 | INFO     | zombie collector waiting for pid 3941091
[2025-10-12 13:20:32] 2025-10-12 17:19:53,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:20:32] 2025-10-12 17:19:53,226 | INFO     | collected zombie processes
[2025-10-12 13:20:32] 2025-10-12 17:19:53,226 | INFO     | will attempt to kill all subprocesses of pid=3941091
[2025-10-12 13:20:32] 2025-10-12 17:19:54,780 | INFO     | process IDs to be killed: [3941091] (in reverse order)
[2025-10-12 13:20:32] 2025-10-12 17:19:55,497 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:20:32] 2025-10-12 17:19:55,498 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:20:32] 2025-10-12 17:19:55,578 | INFO     | did not find any defunct processes belonging to 3941091
[2025-10-12 13:20:32] 2025-10-12 17:19:55,624 | INFO     | did not find any defunct processes belonging to 3941091
[2025-10-12 13:20:32] 2025-10-12 17:19:55,629 | INFO     | ready for new job
[2025-10-12 13:20:32] 2025-10-12 17:19:55,629 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:20:32] 2025-10-12 17:19:55,632 | INFO     | ***************************************
[2025-10-12 13:20:32] 2025-10-12 17:19:55,633 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:20:32] 2025-10-12 17:19:55,633 | INFO     | ***************************************
[2025-10-12 13:20:32] 2025-10-12 17:19:55,637 | INFO     | 
[2025-10-12 13:20:32] 2025-10-12 17:19:55,662 | INFO     | architecture information:
[2025-10-12 13:20:32] 2025-10-12 17:19:55,666 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:20:32] 2025-10-12 17:19:55,723 | INFO     | cat /etc/os-release:
[2025-10-12 13:20:32] NAME="CentOS Linux"
[2025-10-12 13:20:32] VERSION="7 (Core)"
[2025-10-12 13:20:32] ID="centos"
[2025-10-12 13:20:32] ID_LIKE="rhel fedora"
[2025-10-12 13:20:32] VERSION_ID="7"
[2025-10-12 13:20:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:20:32] ANSI_COLOR="0;31"
[2025-10-12 13:20:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:20:32] HOME_URL="https://www.centos.org/"
[2025-10-12 13:20:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:20:32] 
[2025-10-12 13:20:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:20:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:20:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:20:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:20:32] 
[2025-10-12 13:20:32] 2025-10-12 17:19:55,724 | INFO     | ***************************************
[2025-10-12 13:20:32] 2025-10-12 17:19:56,227 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 13:20:32] 2025-10-12 17:19:56,401 | INFO     | sufficient remaining disk space (94204067840 B)
[2025-10-12 13:20:32] 2025-10-12 17:19:56,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:20:32] 2025-10-12 17:19:56,401 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:20:32] 2025-10-12 17:19:56,401 | INFO     | update_server=False
[2025-10-12 13:20:32] 2025-10-12 17:19:56,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:20:32] 2025-10-12 17:19:56,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:20:32] 2025-10-12 17:19:56,403 | INFO     | aborting loop
[2025-10-12 13:20:32] 2025-10-12 17:19:56,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:20:32] 2025-10-12 17:19:56,632 | INFO     | all data control threads have been joined
[2025-10-12 13:20:32] 2025-10-12 17:19:56,672 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:20:32] 2025-10-12 17:19:57,264 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:20:32] 2025-10-12 17:19:57,343 | INFO     | all payload control threads have been joined
[2025-10-12 13:20:32] 2025-10-12 17:19:57,411 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:57,412 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:57,637 | INFO     | [data] control thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:57,678 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:57,936 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:57,948 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:57,949 | INFO     | [job] validate thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:57,956 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:58,036 | INFO     | all job control threads have been joined
[2025-10-12 13:20:32] 2025-10-12 17:19:58,120 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:58,311 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:58,349 | INFO     | [payload] control thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:58,678 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:58,678 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:59,042 | INFO     | [job] control thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:19:59,271 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:20:00,416 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:20:32] 2025-10-12 17:20:22,096 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:20:32] 2025-10-12 17:20:22,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129860212544)>', '<ExcThread(monitor, started 140129515583232)>']
[2025-10-12 13:20:32] 2025-10-12 17:20:26,475 | INFO     | PID=3922354 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:20:32] 2025-10-12 17:20:26,475 | INFO     | .. there are 49 such processes running
[2025-10-12 13:20:32] 2025-10-12 17:20:26,476 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:20:32] 2025-10-12 17:20:26,476 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:20:32] 2025-10-12 17:20:26,476 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:20:32] 2025-10-12 17:20:26,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:20:32] 2025-10-12 17:20:26,476 | INFO     | [monitor] control thread has ended
[2025-10-12 13:20:32] 2025-10-12 17:20:27,980 | INFO     | all workflow threads have been joined
[2025-10-12 13:20:32] 2025-10-12 17:20:27,980 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:20:32] 2025-10-12 17:20:27,981 | INFO     | traces error code: 0
[2025-10-12 13:20:32] 2025-10-12 17:20:27,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:20:32] 2025-10-12 17:20:30,006 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:20:32] 2025-10-12 17:20:30,032 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:20:32] 2025-10-12 17:20:30,056 [wrapper] pilotpid: 3922354
[2025-10-12 13:20:32] 2025-10-12 17:20:30,089 [wrapper] Pilot exit status: 0
[2025-10-12 13:20:32] 2025-10-12 17:20:30,273 [wrapper] pandaids: 6839591050
[2025-10-12 13:20:32] 2025-10-12 17:20:31,081 [wrapper] cleanup supervisor_pilot 1097717 3922355
[2025-10-12 13:20:32] 2025-10-12 17:20:31,104 [wrapper] Test setup, not cleaning
[2025-10-12 13:20:32] 2025-10-12 17:20:31,120 [wrapper] apfmon messages muted
[2025-10-12 13:20:32] 2025-10-12 17:20:31,140 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:20:32] 2025-10-12 17:20:31,166 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:20:32]  *** Error codes and diagnostics ***
[2025-10-12 13:20:32]     "exeErrorCode": 0,
[2025-10-12 13:20:32]     "exeErrorDiag": "",
[2025-10-12 13:20:32]     "pilotErrorCode": 0,
[2025-10-12 13:20:32]     "pilotErrorDiag": "",
[2025-10-12 13:20:32]  *** Listing of results directory ***
[2025-10-12 13:20:32] total 413912
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:14 pilot3.tar.gz
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 02:23 queuedata.json
[2025-10-12 13:20:32] -rwx------. 1 boincer umatlas     36292 Oct 12 02:24 runpilot2-wrapper.sh
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas       100 Oct 12 07:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:20:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 07:06 run_atlas
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas       105 Oct 12 07:06 job.xml
[2025-10-12 13:20:32] -rw-r--r--. 2 boincer umatlas 223248100 Oct 12 07:06 EVNT.46676267._004348.pool.root.1
[2025-10-12 13:20:32] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 07:06 input.tar.gz
[2025-10-12 13:20:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:06 start_atlas.sh
[2025-10-12 13:20:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 07:06 shared
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas         0 Oct 12 07:06 boinc_lockfile
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 07:07 pandaJob.out
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas    975520 Oct 12 07:07 agis_schedconf.cvmfs.json
[2025-10-12 13:20:32] drwx------. 5 boincer umatlas      4096 Oct 12 07:07 pilot3
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas 190196722 Oct 12 13:17 HITS.46676269._072482.pool.root.1
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas       531 Oct 12 13:17 boinc_task_state.xml
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas      6861 Oct 12 13:18 init_data.xml
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas      1056 Oct 12 13:18 memory_monitor_summary.json
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas    571531 Oct 12 13:19 log.46676269._072482.job.log.tgz.1
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas      7830 Oct 12 13:19 heartbeat.json
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 13:20 boinc_mmap_file
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas        28 Oct 12 13:20 wrapper_checkpoint.txt
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas        95 Oct 12 13:20 pilot_heartbeat.json
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas      4824 Oct 12 13:20 pilotlog.txt
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas   2674875 Oct 12 13:20 log.46676269._072482.job.log.1
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas       357 Oct 12 13:20 output.list
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas       620 Oct 12 13:20 runtime_log
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas   3266560 Oct 12 13:20 result.tar.gz
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 13:20 runtime_log.err
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas       658 Oct 12 13:20 0yQODm6f4R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGMTMDm5IsWHm.diag
[2025-10-12 13:20:32] -rw-r--r--. 1 boincer umatlas     21012 Oct 12 13:20 stderr.txt
[2025-10-12 13:20:32] HITS file was successfully produced:
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas 190196722 Oct 12 13:17 shared/HITS.pool.root.1
[2025-10-12 13:20:32]  *** Contents of shared directory: ***
[2025-10-12 13:20:32] total 407532
[2025-10-12 13:20:32] -rw-r--r--. 2 boincer umatlas 223248100 Oct 12 07:06 ATLAS.root_0
[2025-10-12 13:20:32] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 07:06 input.tar.gz
[2025-10-12 13:20:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:06 start_atlas.sh
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas 190196722 Oct 12 13:17 HITS.pool.root.1
[2025-10-12 13:20:32] -rw-------. 1 boincer umatlas   3266560 Oct 12 13:20 result.tar.gz
13:20:33 (3915617): run_atlas exited; CPU time 52211.154357
13:20:33 (3915617): called boinc_finish(0)

</stderr_txt>
]]>

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