Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:09:44 (13976): wrapper (7.7.26015): starting
07:09:44 (13976): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:09:44] Arguments: --nthreads 8
[2025-10-12 07:09:44] Threads: 8
[2025-10-12 07:09:44] Checking for CVMFS
[2025-10-12 07:09:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:09:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:09:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:09:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:09:44] 2.11.2.0 3838 77586 123992 151618 0 57 10343612 18432000 1833 130560 0 79460907 99.995 2453878 29384 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:09:44] CVMFS is ok
[2025-10-12 07:09:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:09:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:09:44] Further information can be found at the LHC@home message board.
[2025-10-12 07:09:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:09:44] Checking for apptainer binary...
[2025-10-12 07:09:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:09:44] Running /usr/bin/apptainer --version
[2025-10-12 07:09:44] apptainer version 1.3.2-1.el7
[2025-10-12 07:09:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:09:45] c-206-4.aglt2.org
[2025-10-12 07:09:45] apptainer works
[2025-10-12 07:09:45] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:09:45] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:09:45] Starting ATLAS job with PandaID=6839386287
[2025-10-12 07:09:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:00:19]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:00:19] 2025-10-12 13:59:31,978 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:00:19] 2025-10-12 13:59:31,979 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 10:00:19] 2025-10-12 13:59:31,980 | INFO     | sum of deviations: 16943601072.000002
[2025-10-12 10:00:19] 2025-10-12 13:59:31,980 | INFO     | mean x: 1760272485.0
[2025-10-12 10:00:19] 2025-10-12 13:59:31,980 | INFO     | mean y: 2465096.48502994
[2025-10-12 10:00:19] 2025-10-12 13:59:31,980 | INFO     | -- intersect: -20650069259.359333
[2025-10-12 10:00:19] 2025-10-12 13:59:31,980 | INFO     | intersect: -20650069259.359333
[2025-10-12 10:00:19] 2025-10-12 13:59:31,980 | INFO     | chi2: 2.3093630405406143
[2025-10-12 10:00:19] 2025-10-12 13:59:31,981 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 10:00:19] 2025-10-12 13:59:31,981 | INFO     | sum of deviations: 27597071793.000004
[2025-10-12 10:00:19] 2025-10-12 13:59:31,982 | INFO     | mean x: 1760272332.5
[2025-10-12 10:00:19] 2025-10-12 13:59:31,982 | INFO     | mean y: 2477669.6296296297
[2025-10-12 10:00:19] 2025-10-12 13:59:31,982 | INFO     | -- intersect: -36847391248.59176
[2025-10-12 10:00:19] 2025-10-12 13:59:31,982 | INFO     | intersect: -36847391248.59176
[2025-10-12 10:00:19] 2025-10-12 13:59:31,982 | INFO     | chi2: 1.4930526664366541
[2025-10-12 10:00:19] 2025-10-12 13:59:31,982 | INFO     | current chi2=1.4930526664366541 (change=35.347858252415115 %)
[2025-10-12 10:00:19] 2025-10-12 13:59:31,982 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 10:00:19] 2025-10-12 13:59:31,983 | INFO     | sum of deviations: 26727045385.000004
[2025-10-12 10:00:19] 2025-10-12 13:59:31,983 | INFO     | mean x: 1760272180.0
[2025-10-12 10:00:19] 2025-10-12 13:59:31,983 | INFO     | mean y: 2476548.0573248407
[2025-10-12 10:00:19] 2025-10-12 13:59:31,983 | INFO     | -- intersect: -39205191693.95524
[2025-10-12 10:00:19] 2025-10-12 13:59:31,984 | INFO     | intersect: -39205191693.95524
[2025-10-12 10:00:19] 2025-10-12 13:59:31,984 | INFO     | chi2: 1.4937962598783623
[2025-10-12 10:00:19] 2025-10-12 13:59:31,984 | INFO     | current chi2=1.4937962598783623 (change=-0.04980356409548701 %)
[2025-10-12 10:00:19] 2025-10-12 13:59:31,984 | INFO     | right removable region: 156
[2025-10-12 10:00:19] 2025-10-12 13:59:31,984 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 10:00:19] 2025-10-12 13:59:31,985 | INFO     | sum of deviations: -9541034796.5
[2025-10-12 10:00:19] 2025-10-12 13:59:31,985 | INFO     | mean x: 1760272637.5
[2025-10-12 10:00:19] 2025-10-12 13:59:31,985 | INFO     | mean y: 2496811.8703703703
[2025-10-12 10:00:19] 2025-10-12 13:59:31,985 | INFO     | -- intersect: 12742469557.935509
[2025-10-12 10:00:19] 2025-10-12 13:59:31,985 | INFO     | intersect: 12742469557.935509
[2025-10-12 10:00:19] 2025-10-12 13:59:31,986 | INFO     | chi2: 0.8616616670954401
[2025-10-12 10:00:19] 2025-10-12 13:59:31,986 | INFO     | current chi2=0.8616616670954401 (change=62.68834081220388 %)
[2025-10-12 10:00:19] 2025-10-12 13:59:31,986 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 10:00:19] 2025-10-12 13:59:31,987 | INFO     | sum of deviations: -11602847149.0
[2025-10-12 10:00:19] 2025-10-12 13:59:31,987 | INFO     | mean x: 1760272790.0
[2025-10-12 10:00:19] 2025-10-12 13:59:31,987 | INFO     | mean y: 2499419.6751592355
[2025-10-12 10:00:19] 2025-10-12 13:59:31,987 | INFO     | -- intersect: 17023488188.71606
[2025-10-12 10:00:19] 2025-10-12 13:59:31,987 | INFO     | intersect: 17023488188.71606
[2025-10-12 10:00:19] 2025-10-12 13:59:31,987 | INFO     | chi2: 0.8434277881727323
[2025-10-12 10:00:19] 2025-10-12 13:59:31,987 | INFO     | current chi2=0.8434277881727323 (change=2.11612975475305 %)
[2025-10-12 10:00:19] 2025-10-12 13:59:31,987 | INFO     | left removable region: 20
[2025-10-12 10:00:19] 2025-10-12 13:59:31,988 | INFO     | sum of square deviations: 779958810.0
[2025-10-12 10:00:19] 2025-10-12 13:59:31,988 | INFO     | sum of deviations: -1305067763.499999
[2025-10-12 10:00:19] 2025-10-12 13:59:31,988 | INFO     | mean x: 1760272759.5
[2025-10-12 10:00:19] 2025-10-12 13:59:31,988 | INFO     | mean y: 2514934.4485294116
[2025-10-12 10:00:19] 2025-10-12 13:59:31,989 | INFO     | -- intersect: 2947895131.372822
[2025-10-12 10:00:19] 2025-10-12 13:59:31,989 | INFO     | intersect: 2947895131.372822
[2025-10-12 10:00:19] 2025-10-12 13:59:31,989 | INFO     | chi2: 0.0011302470547070033
[2025-10-12 10:00:19] 2025-10-12 13:59:31,989 | INFO     | -- intersect: 2947895131.372822
[2025-10-12 10:00:19] 2025-10-12 13:59:31,989 | INFO     | current memory leak: -1.67 B/s (using 136 data points, chi2=0.00)
[2025-10-12 10:00:19] 2025-10-12 13:59:31,989 | INFO     | could have reported an average CPU frequency of 2520 MHz (9 samples)
[2025-10-12 10:00:19] 2025-10-12 13:59:31,990 | INFO     | ..............................
[2025-10-12 10:00:19] 2025-10-12 13:59:31,990 | INFO     | . Timing measurements:
[2025-10-12 10:00:19] 2025-10-12 13:59:31,990 | INFO     | . get job = 0 s
[2025-10-12 10:00:19] 2025-10-12 13:59:31,990 | INFO     | . initial setup = 2 s
[2025-10-12 10:00:19] 2025-10-12 13:59:31,990 | INFO     | . payload setup = 4 s
[2025-10-12 10:00:19] 2025-10-12 13:59:31,990 | INFO     | . stage-in = 0 s
[2025-10-12 10:00:19] 2025-10-12 13:59:31,990 | INFO     | . payload execution = 10143 s
[2025-10-12 10:00:19] 2025-10-12 13:59:31,990 | INFO     | . stage-out = 0 s
[2025-10-12 10:00:19] 2025-10-12 13:59:31,990 | INFO     | . log creation = 0 s
[2025-10-12 10:00:19] 2025-10-12 13:59:31,990 | INFO     | ..............................
[2025-10-12 10:00:19] 2025-10-12 13:59:32,203 | INFO     | 
[2025-10-12 10:00:19] 2025-10-12 13:59:32,203 | INFO     | job summary report
[2025-10-12 10:00:19] 2025-10-12 13:59:32,203 | INFO     | --------------------------------------------------
[2025-10-12 10:00:19] 2025-10-12 13:59:32,203 | INFO     | PanDA job id: 6839386287
[2025-10-12 10:00:19] 2025-10-12 13:59:32,203 | INFO     | task id: 46676269
[2025-10-12 10:00:19] 2025-10-12 13:59:32,203 | INFO     | errors: (none)
[2025-10-12 10:00:19] 2025-10-12 13:59:32,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:00:19] 2025-10-12 13:59:32,204 | INFO     | pilot state: finished 
[2025-10-12 10:00:19] 2025-10-12 13:59:32,204 | INFO     | transexitcode: 0
[2025-10-12 10:00:19] 2025-10-12 13:59:32,204 | INFO     | exeerrorcode: 0
[2025-10-12 10:00:19] 2025-10-12 13:59:32,204 | INFO     | exeerrordiag: 
[2025-10-12 10:00:19] 2025-10-12 13:59:32,204 | INFO     | exitcode: 0
[2025-10-12 10:00:19] 2025-10-12 13:59:32,204 | INFO     | exitmsg: OK
[2025-10-12 10:00:19] 2025-10-12 13:59:32,204 | INFO     | cpuconsumptiontime: 76585 s
[2025-10-12 10:00:19] 2025-10-12 13:59:32,204 | INFO     | nevents: 400
[2025-10-12 10:00:19] 2025-10-12 13:59:32,204 | INFO     | neventsw: 0
[2025-10-12 10:00:19] 2025-10-12 13:59:32,205 | INFO     | pid: 25038
[2025-10-12 10:00:19] 2025-10-12 13:59:32,205 | INFO     | pgrp: 25038
[2025-10-12 10:00:19] 2025-10-12 13:59:32,205 | INFO     | corecount: 8
[2025-10-12 10:00:19] 2025-10-12 13:59:32,205 | INFO     | event service: False
[2025-10-12 10:00:19] 2025-10-12 13:59:32,205 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 4: 2349175, 12: 2349203, 10151: 2377876, 10152: 2386874, 10155: 2386930, 10160: 2387188}
[2025-10-12 10:00:19] 2025-10-12 13:59:32,205 | INFO     | --------------------------------------------------
[2025-10-12 10:00:19] 2025-10-12 13:59:32,205 | INFO     | 
[2025-10-12 10:00:19] 2025-10-12 13:59:32,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 10:00:19] 2025-10-12 13:59:32,219 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,219 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,219 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,219 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,219 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,219 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,219 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,219 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,220 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,220 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,220 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,220 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,220 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,220 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,221 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:00:19] 2025-10-12 13:59:32,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,221 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:00:19] 2025-10-12 13:59:32,221 | INFO     | job 6839386287 has completed (purged errors)
[2025-10-12 10:00:19] 2025-10-12 13:59:32,221 | INFO     | overall cleanup function is called
[2025-10-12 10:00:19] 2025-10-12 13:59:33,228 | INFO     | --- collectZombieJob: --- 10, [25038]
[2025-10-12 10:00:19] 2025-10-12 13:59:33,228 | INFO     | zombie collector waiting for pid 25038
[2025-10-12 10:00:19] 2025-10-12 13:59:33,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:00:19] 2025-10-12 13:59:33,228 | INFO     | collected zombie processes
[2025-10-12 10:00:19] 2025-10-12 13:59:33,228 | INFO     | will attempt to kill all subprocesses of pid=25038
[2025-10-12 10:00:19] 2025-10-12 13:59:33,332 | INFO     | process IDs to be killed: [25038] (in reverse order)
[2025-10-12 10:00:19] 2025-10-12 13:59:33,370 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:00:19] 2025-10-12 13:59:33,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:00:19] 2025-10-12 13:59:33,373 | INFO     | did not find any defunct processes belonging to 25038
[2025-10-12 10:00:19] 2025-10-12 13:59:33,376 | INFO     | did not find any defunct processes belonging to 25038
[2025-10-12 10:00:19] 2025-10-12 13:59:33,376 | INFO     | ready for new job
[2025-10-12 10:00:19] 2025-10-12 13:59:33,376 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:00:19] 2025-10-12 13:59:33,378 | INFO     | ***************************************
[2025-10-12 10:00:19] 2025-10-12 13:59:33,378 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:00:19] 2025-10-12 13:59:33,378 | INFO     | ***************************************
[2025-10-12 10:00:19] 2025-10-12 13:59:33,378 | INFO     | 
[2025-10-12 10:00:19] 2025-10-12 13:59:33,379 | INFO     | architecture information:
[2025-10-12 10:00:19] 2025-10-12 13:59:33,379 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:00:19] 2025-10-12 13:59:33,391 | INFO     | cat /etc/os-release:
[2025-10-12 10:00:19] NAME="CentOS Linux"
[2025-10-12 10:00:19] VERSION="7 (Core)"
[2025-10-12 10:00:19] ID="centos"
[2025-10-12 10:00:19] ID_LIKE="rhel fedora"
[2025-10-12 10:00:19] VERSION_ID="7"
[2025-10-12 10:00:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:00:19] ANSI_COLOR="0;31"
[2025-10-12 10:00:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:00:19] HOME_URL="https://www.centos.org/"
[2025-10-12 10:00:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:00:19] 
[2025-10-12 10:00:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:00:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:00:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:00:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:00:19] 
[2025-10-12 10:00:19] 2025-10-12 13:59:33,391 | INFO     | ***************************************
[2025-10-12 10:00:19] 2025-10-12 13:59:33,894 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 10:00:19] 2025-10-12 13:59:33,907 | INFO     | sufficient remaining disk space (28007464960 B)
[2025-10-12 10:00:19] 2025-10-12 13:59:33,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:00:19] 2025-10-12 13:59:33,908 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:00:19] 2025-10-12 13:59:33,908 | INFO     | update_server=False
[2025-10-12 10:00:19] 2025-10-12 13:59:33,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:00:19] 2025-10-12 13:59:33,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:00:19] 2025-10-12 13:59:33,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:00:19] 2025-10-12 13:59:34,109 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 10:00:19] 2025-10-12 13:59:34,109 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 10:00:19] 2025-10-12 13:59:34,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:00:19] 2025-10-12 13:59:34,109 | INFO     | will abort loop
[2025-10-12 10:00:19] 2025-10-12 13:59:34,348 | INFO     | all data control threads have been joined
[2025-10-12 10:00:19] 2025-10-12 13:59:34,365 | INFO     | all job control threads have been joined
[2025-10-12 10:00:19] 2025-10-12 13:59:34,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:00:19] 2025-10-12 13:59:34,758 | INFO     | all payload control threads have been joined
[2025-10-12 10:00:19] 2025-10-12 13:59:34,913 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:34,914 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:35,115 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:35,168 | INFO     | [job] validate thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:35,170 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:35,353 | INFO     | [data] control thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:35,370 | INFO     | [job] control thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:35,427 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:35,679 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:35,763 | INFO     | [payload] control thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:35,837 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:36,149 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:36,305 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:36,596 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:37,915 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:00:19] 2025-10-12 13:59:44,147 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:00:19] 2025-10-12 13:59:45,152 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:00:19] 2025-10-12 14:00:04,689 | INFO     | PID=17648 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 10:00:19] 2025-10-12 14:00:04,690 | INFO     | .. there are 3 such processes running
[2025-10-12 10:00:19] 2025-10-12 14:00:04,690 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:00:19] 2025-10-12 14:00:04,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:00:19] 2025-10-12 14:00:04,690 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:00:19] 2025-10-12 14:00:12,185 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:00:19] 2025-10-12 14:00:14,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785330759488)>', '<ExcThread(monitor, started 139785037391616)>']
[2025-10-12 10:00:19] 2025-10-12 14:00:14,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:00:19] 2025-10-12 14:00:14,740 | INFO     | [monitor] control thread has ended
[2025-10-12 10:00:19] 2025-10-12 14:00:19,132 | INFO     | all workflow threads have been joined
[2025-10-12 10:00:19] 2025-10-12 14:00:19,133 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:00:19] 2025-10-12 14:00:19,133 | INFO     | traces error code: 0
[2025-10-12 10:00:19] 2025-10-12 14:00:19,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:00:19] 2025-10-12 14:00:19,231 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:00:19] 2025-10-12 14:00:19,233 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:00:19] 2025-10-12 14:00:19,235 [wrapper] pilotpid: 17648
[2025-10-12 10:00:19] 2025-10-12 14:00:19,237 [wrapper] Pilot exit status: 0
[2025-10-12 10:00:19] 2025-10-12 14:00:19,245 [wrapper] pandaids: 6839386287
[2025-10-12 10:00:19] 2025-10-12 14:00:19,274 [wrapper] cleanup supervisor_pilot  5265 17649
[2025-10-12 10:00:19] 2025-10-12 14:00:19,276 [wrapper] Test setup, not cleaning
[2025-10-12 10:00:19] 2025-10-12 14:00:19,278 [wrapper] apfmon messages muted
[2025-10-12 10:00:19] 2025-10-12 14:00:19,280 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:00:19] 2025-10-12 14:00:19,283 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:00:19]  *** Error codes and diagnostics ***
[2025-10-12 10:00:19]     "exeErrorCode": 0,
[2025-10-12 10:00:19]     "exeErrorDiag": "",
[2025-10-12 10:00:19]     "pilotErrorCode": 0,
[2025-10-12 10:00:19]     "pilotErrorDiag": "",
[2025-10-12 10:00:19]  *** Listing of results directory ***
[2025-10-12 10:00:19] total 412024
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 00:04 pilot3.tar.gz
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 00:08 queuedata.json
[2025-10-12 10:00:19] -rwx------ 1 boincer umatlas     36292 Oct 12 00:09 runpilot2-wrapper.sh
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas       100 Oct 12 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:00:19] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 07:09 run_atlas
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas       105 Oct 12 07:09 job.xml
[2025-10-12 10:00:19] -rw-r--r-- 2 boincer umatlas 222870580 Oct 12 07:09 EVNT.46676267._003246.pool.root.1
[2025-10-12 10:00:19] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 07:09 input.tar.gz
[2025-10-12 10:00:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:09 start_atlas.sh
[2025-10-12 10:00:19] drwxrwx--x 2 boincer umatlas      4096 Oct 12 07:09 shared
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas         0 Oct 12 07:09 boinc_lockfile
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 07:09 pandaJob.out
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas    975520 Oct 12 07:09 agis_schedconf.cvmfs.json
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas   1560580 Oct 12 07:09 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:00:19] drwx------ 5 boincer umatlas      4096 Oct 12 07:09 pilot3
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas      5950 Oct 12 09:55 init_data.xml
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas 191458612 Oct 12 09:58 HITS.46676269._070639.pool.root.1
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas       531 Oct 12 09:59 boinc_task_state.xml
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas      1053 Oct 12 09:59 memory_monitor_summary.json
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas        95 Oct 12 09:59 pilot_heartbeat.json
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas    408658 Oct 12 09:59 log.46676269._070639.job.log.tgz.1
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas      7854 Oct 12 09:59 heartbeat.json
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:00 boinc_mmap_file
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas        28 Oct 12 10:00 wrapper_checkpoint.txt
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas      5079 Oct 12 10:00 pilotlog.txt
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas   1433214 Oct 12 10:00 log.46676269._070639.job.log.1
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas       357 Oct 12 10:00 output.list
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:00 runtime_log
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas   1863680 Oct 12 10:00 result.tar.gz
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 10:00 runtime_log.err
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas       661 Oct 12 10:00 C2yNDmWZ2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwYiNDmDbaOZm.diag
[2025-10-12 10:00:19] -rw-r--r-- 1 boincer umatlas     20912 Oct 12 10:00 stderr.txt
[2025-10-12 10:00:19] HITS file was successfully produced:
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas 191458612 Oct 12 09:58 shared/HITS.pool.root.1
[2025-10-12 10:00:19]  *** Contents of shared directory: ***
[2025-10-12 10:00:19] total 407020
[2025-10-12 10:00:19] -rw-r--r-- 2 boincer umatlas 222870580 Oct 12 07:09 ATLAS.root_0
[2025-10-12 10:00:19] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 07:09 input.tar.gz
[2025-10-12 10:00:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:09 start_atlas.sh
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas 191458612 Oct 12 09:58 HITS.pool.root.1
[2025-10-12 10:00:19] -rw------- 1 boincer umatlas   1863680 Oct 12 10:00 result.tar.gz
10:00:21 (13976): run_atlas exited; CPU time 76777.648507
10:00:21 (13976): called boinc_finish(0)

</stderr_txt>
]]>

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