Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:04:38 (1497): wrapper (7.7.26015): starting
21:04:38 (1497): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:04:38] Arguments: --nthreads 8
[2025-10-12 21:04:38] Threads: 8
[2025-10-12 21:04:38] Checking for CVMFS
[2025-10-12 21:04:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:04:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:04:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:04:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:04:41] 2.11.2.0 23110 220801 136376 151633 0 60 17471213 25165825 4632 130560 0 108567469 99.870 69016305 3475 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 21:04:41] CVMFS is ok
[2025-10-12 21:04:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:04:41] Checking for apptainer binary...
[2025-10-12 21:04:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:04:41] Running /usr/bin/apptainer --version
[2025-10-12 21:04:41] apptainer version 1.3.2-1.el7
[2025-10-12 21:04:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:05:02] cg-vwn378.simple-grid.lan
[2025-10-12 21:05:02] apptainer works
[2025-10-12 21:05:02] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:05:02] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:05:02] Starting ATLAS job with PandaID=6839591434
[2025-10-12 21:05:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:14:55]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:14:55] 2025-10-12 23:14:18,893 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:14:55] 2025-10-12 23:14:18,898 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:14:55] 2025-10-12 23:14:18,899 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 01:14:55] 2025-10-12 23:14:18,901 | INFO     | sum of deviations: 90835624722.0
[2025-10-13 01:14:55] 2025-10-12 23:14:18,901 | INFO     | mean x: 1760303652.5
[2025-10-13 01:14:55] 2025-10-12 23:14:18,901 | INFO     | mean y: 2430435.396551724
[2025-10-13 01:14:55] 2025-10-12 23:14:18,901 | INFO     | -- intersect: -41293712245.42199
[2025-10-13 01:14:55] 2025-10-12 23:14:18,901 | INFO     | intersect: -41293712245.42199
[2025-10-13 01:14:55] 2025-10-12 23:14:18,902 | INFO     | chi2: 6.239254926560498
[2025-10-13 01:14:55] 2025-10-12 23:14:18,902 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 01:14:55] 2025-10-12 23:14:18,904 | INFO     | sum of deviations: 104785777246.99998
[2025-10-13 01:14:55] 2025-10-12 23:14:18,904 | INFO     | mean x: 1760303500.0
[2025-10-13 01:14:55] 2025-10-12 23:14:18,904 | INFO     | mean y: 2438941.1982378853
[2025-10-13 01:14:55] 2025-10-12 23:14:18,905 | INFO     | -- intersect: -50853575796.663635
[2025-10-13 01:14:55] 2025-10-12 23:14:18,905 | INFO     | intersect: -50853575796.663635
[2025-10-13 01:14:55] 2025-10-12 23:14:18,905 | INFO     | chi2: 5.420948064274431
[2025-10-13 01:14:55] 2025-10-12 23:14:18,905 | INFO     | current chi2=5.420948064274431 (change=13.115458046160866 %)
[2025-10-13 01:14:55] 2025-10-12 23:14:18,905 | INFO     | right removable region: 226
[2025-10-13 01:14:55] 2025-10-12 23:14:18,906 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 01:14:55] 2025-10-12 23:14:18,908 | INFO     | sum of deviations: 13870792379.0
[2025-10-13 01:14:55] 2025-10-12 23:14:18,908 | INFO     | mean x: 1760303805.0
[2025-10-13 01:14:55] 2025-10-12 23:14:18,908 | INFO     | mean y: 2478294.290748899
[2025-10-13 01:14:55] 2025-10-12 23:14:18,908 | INFO     | -- intersect: -6729478679.347774
[2025-10-13 01:14:55] 2025-10-12 23:14:18,909 | INFO     | intersect: -6729478679.347774
[2025-10-13 01:14:55] 2025-10-12 23:14:18,909 | INFO     | chi2: 1.8614140780213817
[2025-10-13 01:14:55] 2025-10-12 23:14:18,909 | INFO     | current chi2=1.8614140780213817 (change=70.16608393259676 %)
[2025-10-13 01:14:55] 2025-10-12 23:14:18,909 | INFO     | sum of square deviations: 3392567795.5
[2025-10-13 01:14:55] 2025-10-12 23:14:18,911 | INFO     | sum of deviations: -18284146496.500004
[2025-10-13 01:14:55] 2025-10-12 23:14:18,911 | INFO     | mean x: 1760303957.5
[2025-10-13 01:14:55] 2025-10-12 23:14:18,911 | INFO     | mean y: 2499076.6441441444
[2025-10-13 01:14:55] 2025-10-12 23:14:18,911 | INFO     | -- intersect: 9489606594.43368
[2025-10-13 01:14:55] 2025-10-12 23:14:18,912 | INFO     | intersect: 9489606594.43368
[2025-10-13 01:14:55] 2025-10-12 23:14:18,912 | INFO     | chi2: 0.9227617494901742
[2025-10-13 01:14:55] 2025-10-12 23:14:18,912 | INFO     | current chi2=0.9227617494901742 (change=50.426841593943585 %)
[2025-10-13 01:14:55] 2025-10-12 23:14:18,912 | INFO     | sum of square deviations: 3168461268.0
[2025-10-13 01:14:55] 2025-10-12 23:14:18,914 | INFO     | sum of deviations: -20879346570.0
[2025-10-13 01:14:55] 2025-10-12 23:14:18,914 | INFO     | mean x: 1760304110.0
[2025-10-13 01:14:55] 2025-10-12 23:14:18,914 | INFO     | mean y: 2500815.2580645164
[2025-10-13 01:14:55] 2025-10-12 23:14:18,915 | INFO     | -- intersect: 11602453117.810686
[2025-10-13 01:14:55] 2025-10-12 23:14:18,915 | INFO     | intersect: 11602453117.810686
[2025-10-13 01:14:55] 2025-10-12 23:14:18,915 | INFO     | chi2: 0.9048719742174343
[2025-10-13 01:14:55] 2025-10-12 23:14:18,915 | INFO     | current chi2=0.9048719742174343 (change=1.9387209409822241 %)
[2025-10-13 01:14:55] 2025-10-12 23:14:18,915 | INFO     | left removable region: 30
[2025-10-13 01:14:55] 2025-10-12 23:14:18,916 | INFO     | sum of square deviations: 2334722845.0
[2025-10-13 01:14:55] 2025-10-12 23:14:18,917 | INFO     | sum of deviations: -3807057671.4999986
[2025-10-13 01:14:55] 2025-10-12 23:14:18,917 | INFO     | mean x: 1760304384.5
[2025-10-13 01:14:55] 2025-10-12 23:14:18,917 | INFO     | mean y: 2510177.6683673467
[2025-10-13 01:14:55] 2025-10-12 23:14:18,917 | INFO     | -- intersect: 2872906689.8444448
[2025-10-13 01:14:55] 2025-10-12 23:14:18,917 | INFO     | intersect: 2872906689.8444448
[2025-10-13 01:14:55] 2025-10-12 23:14:18,918 | INFO     | chi2: 0.012158941344624153
[2025-10-13 01:14:55] 2025-10-12 23:14:18,918 | INFO     | -- intersect: 2872906689.8444448
[2025-10-13 01:14:55] 2025-10-12 23:14:18,918 | INFO     | current memory leak: -1.63 B/s (using 196 data points, chi2=0.01)
[2025-10-13 01:14:55] 2025-10-12 23:14:18,919 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 01:14:55] 2025-10-12 23:14:18,919 | INFO     | ..............................
[2025-10-13 01:14:55] 2025-10-12 23:14:18,919 | INFO     | . Timing measurements:
[2025-10-13 01:14:55] 2025-10-12 23:14:18,919 | INFO     | . get job = 0 s
[2025-10-13 01:14:55] 2025-10-12 23:14:18,919 | INFO     | . initial setup = 8 s
[2025-10-13 01:14:55] 2025-10-12 23:14:18,919 | INFO     | . payload setup = 134 s
[2025-10-13 01:14:55] 2025-10-12 23:14:18,919 | INFO     | . stage-in = 0 s
[2025-10-13 01:14:55] 2025-10-12 23:14:18,919 | INFO     | . payload execution = 14311 s
[2025-10-13 01:14:55] 2025-10-12 23:14:18,920 | INFO     | . stage-out = 3 s
[2025-10-13 01:14:55] 2025-10-12 23:14:18,920 | INFO     | . log creation = 1 s
[2025-10-13 01:14:55] 2025-10-12 23:14:18,920 | INFO     | ..............................
[2025-10-13 01:14:55] 2025-10-12 23:14:19,309 | INFO     | 
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | job summary report
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | --------------------------------------------------
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | PanDA job id: 6839591434
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | task id: 46676269
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | errors: (none)
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | pilot state: finished 
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | transexitcode: 0
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | exeerrorcode: 0
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | exeerrordiag: 
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | exitcode: 0
[2025-10-13 01:14:55] 2025-10-12 23:14:19,310 | INFO     | exitmsg: OK
[2025-10-13 01:14:55] 2025-10-12 23:14:19,311 | INFO     | cpuconsumptiontime: 53282 s
[2025-10-13 01:14:55] 2025-10-12 23:14:19,311 | INFO     | nevents: 400
[2025-10-13 01:14:55] 2025-10-12 23:14:19,311 | INFO     | neventsw: 0
[2025-10-13 01:14:55] 2025-10-12 23:14:19,311 | INFO     | pid: 11879
[2025-10-13 01:14:55] 2025-10-12 23:14:19,311 | INFO     | pgrp: 11879
[2025-10-13 01:14:55] 2025-10-12 23:14:19,311 | INFO     | corecount: 8
[2025-10-13 01:14:55] 2025-10-12 23:14:19,311 | INFO     | event service: False
[2025-10-13 01:14:55] 2025-10-12 23:14:19,311 | INFO     | sizes: {0: 2348858, 1: 2348886, 12: 2348886, 23: 2348914, 33: 2348942, 44: 2348998, 55: 2349154, 65: 2349182, 76: 2349210, 85: 2349528, 87: 2349556, 14449: 2380017
[2025-10-13 01:14:55] 2025-10-12 23:14:19,311 | INFO     | --------------------------------------------------
[2025-10-13 01:14:55] 2025-10-12 23:14:19,311 | INFO     | 
[2025-10-13 01:14:55] 2025-10-12 23:14:19,311 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-13 01:14:55] 2025-10-12 23:14:19,449 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,450 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,450 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,450 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,450 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,450 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,450 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,450 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,451 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:14:55] 2025-10-12 23:14:19,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,451 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:14:55] 2025-10-12 23:14:19,452 | INFO     | job 6839591434 has completed (purged errors)
[2025-10-13 01:14:55] 2025-10-12 23:14:19,452 | INFO     | overall cleanup function is called
[2025-10-13 01:14:55] 2025-10-12 23:14:20,460 | INFO     | --- collectZombieJob: --- 10, [11879]
[2025-10-13 01:14:55] 2025-10-12 23:14:20,461 | INFO     | zombie collector waiting for pid 11879
[2025-10-13 01:14:55] 2025-10-12 23:14:20,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:14:55] 2025-10-12 23:14:20,461 | INFO     | collected zombie processes
[2025-10-13 01:14:55] 2025-10-12 23:14:20,461 | INFO     | will attempt to kill all subprocesses of pid=11879
[2025-10-13 01:14:55] 2025-10-12 23:14:20,557 | INFO     | process IDs to be killed: [11879] (in reverse order)
[2025-10-13 01:14:55] 2025-10-12 23:14:21,184 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:14:55] 2025-10-12 23:14:21,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:14:55] 2025-10-12 23:14:21,187 | INFO     | did not find any defunct processes belonging to 11879
[2025-10-13 01:14:55] 2025-10-12 23:14:21,190 | INFO     | did not find any defunct processes belonging to 11879
[2025-10-13 01:14:55] 2025-10-12 23:14:21,190 | INFO     | ready for new job
[2025-10-13 01:14:55] 2025-10-12 23:14:21,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:14:55] 2025-10-12 23:14:21,193 | INFO     | ***************************************
[2025-10-13 01:14:55] 2025-10-12 23:14:21,193 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:14:55] 2025-10-12 23:14:21,193 | INFO     | ***************************************
[2025-10-13 01:14:55] 2025-10-12 23:14:21,193 | INFO     | 
[2025-10-13 01:14:55] 2025-10-12 23:14:21,194 | INFO     | pilot is running in a VM
[2025-10-13 01:14:55] 2025-10-12 23:14:21,194 | INFO     | architecture information:
[2025-10-13 01:14:55] 2025-10-12 23:14:21,196 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:14:55] 2025-10-12 23:14:21,443 | INFO     | cat /etc/os-release:
[2025-10-13 01:14:55] NAME="CentOS Linux"
[2025-10-13 01:14:55] VERSION="7 (Core)"
[2025-10-13 01:14:55] ID="centos"
[2025-10-13 01:14:55] ID_LIKE="rhel fedora"
[2025-10-13 01:14:55] VERSION_ID="7"
[2025-10-13 01:14:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:14:55] ANSI_COLOR="0;31"
[2025-10-13 01:14:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:14:55] HOME_URL="https://www.centos.org/"
[2025-10-13 01:14:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:14:55] 
[2025-10-13 01:14:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:14:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:14:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:14:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:14:55] 
[2025-10-13 01:14:55] 2025-10-12 23:14:21,443 | INFO     | ***************************************
[2025-10-13 01:14:55] 2025-10-12 23:14:21,947 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-13 01:14:55] 2025-10-12 23:14:22,227 | INFO     | sufficient remaining disk space (495839084544 B)
[2025-10-13 01:14:55] 2025-10-12 23:14:22,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:14:55] 2025-10-12 23:14:22,228 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:14:55] 2025-10-12 23:14:22,228 | INFO     | update_server=False
[2025-10-13 01:14:55] 2025-10-12 23:14:22,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:14:55] 2025-10-12 23:14:22,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:14:55] 2025-10-12 23:14:22,229 | INFO     | aborting loop
[2025-10-13 01:14:55] 2025-10-12 23:14:22,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:14:55] 2025-10-12 23:14:22,672 | INFO     | all payload control threads have been joined
[2025-10-13 01:14:55] 2025-10-12 23:14:22,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:14:55] 2025-10-12 23:14:22,950 | INFO     | all data control threads have been joined
[2025-10-13 01:14:55] 2025-10-12 23:14:23,233 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:23,234 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:23,276 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:23,396 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:23,592 | INFO     | [job] validate thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:23,675 | INFO     | all job control threads have been joined
[2025-10-13 01:14:55] 2025-10-12 23:14:23,678 | INFO     | [payload] control thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:23,718 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:23,881 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:23,956 | INFO     | [data] control thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:24,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:14:55] 2025-10-12 23:14:24,241 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:24,324 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:24,362 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:24,514 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:24,681 | INFO     | [job] control thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:25,078 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:26,734 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:14:55] 2025-10-12 23:14:27,102 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:14:55] 2025-10-12 23:14:27,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140209172395840)>', '<ExcThread(monitor, started 140208569825024)>']
[2025-10-13 01:14:55] 2025-10-12 23:14:32,539 | INFO     | all workflow threads have been joined
[2025-10-13 01:14:55] 2025-10-12 23:14:32,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:14:55] 2025-10-12 23:14:32,540 | INFO     | traces error code: 0
[2025-10-13 01:14:55] 2025-10-12 23:14:32,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:14:55] 2025-10-12 23:14:51,330 | INFO     | PID=5328 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 01:14:55] 2025-10-12 23:14:51,330 | INFO     | .. there are 9 such processes running
[2025-10-13 01:14:55] 2025-10-12 23:14:51,332 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:14:55] 2025-10-12 23:14:51,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:14:55] 2025-10-12 23:14:51,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:14:55] 2025-10-12 23:14:51,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:14:55] 2025-10-12 23:14:51,332 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 01:14:55] 2025-10-12 23:14:51,333 | INFO     | [monitor] control thread has ended
[2025-10-13 01:14:55] 2025-10-12 23:14:51,741 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:14:55] 2025-10-12 23:14:51,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:14:55] 2025-10-12 23:14:51,828 [wrapper] pilotpid: 5328
[2025-10-13 01:14:55] 2025-10-12 23:14:51,891 [wrapper] Pilot exit status: 0
[2025-10-13 01:14:55] 2025-10-12 23:14:52,220 [wrapper] pandaids: 6839591434
[2025-10-13 01:14:55] 2025-10-12 23:14:52,790 [wrapper] cleanup supervisor_pilot 21523 5329
[2025-10-13 01:14:55] 2025-10-12 23:14:52,813 [wrapper] Test setup, not cleaning
[2025-10-13 01:14:55] 2025-10-12 23:14:52,867 [wrapper] apfmon messages muted
[2025-10-13 01:14:55] 2025-10-12 23:14:52,921 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:14:55] 2025-10-12 23:14:52,966 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:14:55]  *** Error codes and diagnostics ***
[2025-10-13 01:14:55]     "exeErrorCode": 0,
[2025-10-13 01:14:55]     "exeErrorDiag": "",
[2025-10-13 01:14:55]     "pilotErrorCode": 0,
[2025-10-13 01:14:55]     "pilotErrorDiag": "",
[2025-10-13 01:14:55]  *** Listing of results directory ***
[2025-10-13 01:14:55] total 413288
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:14 pilot3.tar.gz
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc      5112 Oct 12 08:28 queuedata.json
[2025-10-13 01:14:55] -rwx------. 1 boinc boinc     36292 Oct 12 08:31 runpilot2-wrapper.sh
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc       100 Oct 12 21:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:14:55] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 21:04 run_atlas
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc       105 Oct 12 21:04 job.xml
[2025-10-13 01:14:55] -rw-r--r--. 2 boinc boinc 220781610 Oct 12 21:04 EVNT.46676267._004511.pool.root.1
[2025-10-13 01:14:55] -rw-r--r--. 2 boinc boinc    569679 Oct 12 21:04 input.tar.gz
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc      6392 Oct 12 21:04 init_data.xml
[2025-10-13 01:14:55] -rw-r--r--. 2 boinc boinc     15120 Oct 12 21:04 start_atlas.sh
[2025-10-13 01:14:55] drwxrwx--x. 2 boinc boinc        68 Oct 12 21:04 shared
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc         0 Oct 12 21:04 boinc_lockfile
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc      2550 Oct 12 21:05 pandaJob.out
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc    975528 Oct 12 21:08 agis_schedconf.cvmfs.json
[2025-10-13 01:14:55] drwx------. 5 boinc boinc      4096 Oct 12 21:09 pilot3
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc 193701608 Oct 13 01:11 HITS.46676269._072698.pool.root.1
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc       531 Oct 13 01:12 boinc_task_state.xml
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc      1030 Oct 13 01:12 memory_monitor_summary.json
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc   1560580 Oct 13 01:12 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc    452152 Oct 13 01:12 log.46676269._072698.job.log.tgz.1
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc      7784 Oct 13 01:14 heartbeat.json
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc        95 Oct 13 01:14 pilot_heartbeat.json
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc       889 Oct 13 01:14 pilotlog.txt
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc   1969370 Oct 13 01:14 log.46676269._072698.job.log.1
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc        28 Oct 13 01:14 wrapper_checkpoint.txt
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc       357 Oct 13 01:14 output.list
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc      8192 Oct 13 01:14 boinc_mmap_file
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc       620 Oct 13 01:14 runtime_log
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc   2437120 Oct 13 01:14 result.tar.gz
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc       657 Oct 13 01:14 tjYMDmGn4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsriNDmx5bJ1m.diag
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc      8717 Oct 13 01:14 runtime_log.err
[2025-10-13 01:14:55] -rw-r--r--. 1 boinc boinc     20603 Oct 13 01:14 stderr.txt
[2025-10-13 01:14:55] HITS file was successfully produced:
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc 193701608 Oct 13 01:11 shared/HITS.pool.root.1
[2025-10-13 01:14:55]  *** Contents of shared directory: ***
[2025-10-13 01:14:55] total 407728
[2025-10-13 01:14:55] -rw-r--r--. 2 boinc boinc 220781610 Oct 12 21:04 ATLAS.root_0
[2025-10-13 01:14:55] -rw-r--r--. 2 boinc boinc    569679 Oct 12 21:04 input.tar.gz
[2025-10-13 01:14:55] -rw-r--r--. 2 boinc boinc     15120 Oct 12 21:04 start_atlas.sh
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc 193701608 Oct 13 01:11 HITS.pool.root.1
[2025-10-13 01:14:55] -rw-------. 1 boinc boinc   2437120 Oct 13 01:14 result.tar.gz
01:14:57 (1497): run_atlas exited; CPU time 53481.545372
01:14:57 (1497): called boinc_finish(0)

</stderr_txt>
]]>

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