Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:02:39 (1112388): wrapper (7.7.26015): starting
09:02:39 (1112388): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 09:02:39] Arguments: --nthreads 11
[2025-10-12 09:02:39] Threads: 11
[2025-10-12 09:02:39] Checking for CVMFS
[2025-10-12 09:02:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:02:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:02:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:02:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:02:39] 2.13.2.0 5096 5714 98028 151620 0 458 36370878 40960001 17936 16776704 0 15998284 99.873 3901348 33693 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:02:39] CVMFS is ok
[2025-10-12 09:02:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:02:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:02:39] Further information can be found at the LHC@home message board.
[2025-10-12 09:02:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:02:39] Checking for apptainer binary...
[2025-10-12 09:02:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:02:39] Running /usr/bin/apptainer --version
[2025-10-12 09:02:39] apptainer version 1.4.3-1.el9
[2025-10-12 09:02:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:02:40] c-212-5.aglt2.org
[2025-10-12 09:02:40] apptainer works
[2025-10-12 09:02:40] Set ATHENA_PROC_NUMBER=11
[2025-10-12 09:02:40] Set ATHENA_CORE_NUMBER=11
[2025-10-12 09:02:40] Starting ATLAS job with PandaID=6839588902
[2025-10-12 09:02:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:49:21]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:49:21] 2025-10-12 15:48:39,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:49:21] 2025-10-12 15:48:39,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:49:21] 2025-10-12 15:48:39,786 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:49:21] 2025-10-12 15:48:39,786 | INFO     | sum of square deviations: 1318400215.086423
[2025-10-12 11:49:21] 2025-10-12 15:48:39,787 | INFO     | sum of deviations: 78993657266.34566
[2025-10-12 11:49:21] 2025-10-12 15:48:39,787 | INFO     | mean x: 1760279122.7654321
[2025-10-12 11:49:21] 2025-10-12 15:48:39,787 | INFO     | mean y: 2527683.061728395
[2025-10-12 11:49:21] 2025-10-12 15:48:39,787 | INFO     | -- intersect: -105466876922.36847
[2025-10-12 11:49:21] 2025-10-12 15:48:39,787 | INFO     | intersect: -105466876922.36847
[2025-10-12 11:49:21] 2025-10-12 15:48:39,787 | INFO     | chi2: 3.1881537950427634
[2025-10-12 11:49:21] 2025-10-12 15:48:39,788 | INFO     | sum of square deviations: 1200076227.2229335
[2025-10-12 11:49:21] 2025-10-12 15:48:39,789 | INFO     | sum of deviations: 76419518893.172
[2025-10-12 11:49:21] 2025-10-12 15:48:39,793 | INFO     | mean x: 1760278970.2738853
[2025-10-12 11:49:21] 2025-10-12 15:48:39,793 | INFO     | mean y: 2524364.5541401273
[2025-10-12 11:49:21] 2025-10-12 15:48:39,793 | INFO     | -- intersect: -112090081900.45549
[2025-10-12 11:49:21] 2025-10-12 15:48:39,793 | INFO     | intersect: -112090081900.45549
[2025-10-12 11:49:21] 2025-10-12 15:48:39,793 | INFO     | chi2: 3.176544902272479
[2025-10-12 11:49:21] 2025-10-12 15:48:39,793 | INFO     | current chi2=3.176544902272479 (change=0.3641258708514874 %)
[2025-10-12 11:49:21] 2025-10-12 15:48:39,793 | INFO     | right removable region: 156
[2025-10-12 11:49:21] 2025-10-12 15:48:39,794 | INFO     | sum of square deviations: 1200049997.2229335
[2025-10-12 11:49:21] 2025-10-12 15:48:39,794 | INFO     | sum of deviations: 36649574311.719765
[2025-10-12 11:49:21] 2025-10-12 15:48:39,794 | INFO     | mean x: 1760279275.2738853
[2025-10-12 11:49:21] 2025-10-12 15:48:39,795 | INFO     | mean y: 2581973.541401274
[2025-10-12 11:49:21] 2025-10-12 15:48:39,795 | INFO     | -- intersect: -53756416616.36967
[2025-10-12 11:49:21] 2025-10-12 15:48:39,795 | INFO     | intersect: -53756416616.36967
[2025-10-12 11:49:21] 2025-10-12 15:48:39,795 | INFO     | chi2: 0.6258440278188484
[2025-10-12 11:49:21] 2025-10-12 15:48:39,795 | INFO     | current chi2=0.6258440278188484 (change=80.36970397124603 %)
[2025-10-12 11:49:21] 2025-10-12 15:48:39,795 | INFO     | sum of square deviations: 1089002241.8355253
[2025-10-12 11:49:21] 2025-10-12 15:48:39,796 | INFO     | sum of deviations: 23714729155.54604
[2025-10-12 11:49:21] 2025-10-12 15:48:39,796 | INFO     | mean x: 1760279427.7828948
[2025-10-12 11:49:21] 2025-10-12 15:48:39,796 | INFO     | mean y: 2599658.4407894737
[2025-10-12 11:49:21] 2025-10-12 15:48:39,796 | INFO     | -- intersect: -38330241417.799805
[2025-10-12 11:49:21] 2025-10-12 15:48:39,796 | INFO     | intersect: -38330241417.799805
[2025-10-12 11:49:21] 2025-10-12 15:48:39,801 | INFO     | chi2: 0.4485123991720216
[2025-10-12 11:49:21] 2025-10-12 15:48:39,801 | INFO     | current chi2=0.4485123991720216 (change=28.334796013769058 %)
[2025-10-12 11:49:21] 2025-10-12 15:48:39,801 | INFO     | sum of square deviations: 985024386.4217685
[2025-10-12 11:49:21] 2025-10-12 15:48:39,802 | INFO     | sum of deviations: 13915816042.43536
[2025-10-12 11:49:21] 2025-10-12 15:48:39,802 | INFO     | mean x: 1760279580.292517
[2025-10-12 11:49:21] 2025-10-12 15:48:39,802 | INFO     | mean y: 2614074.850340136
[2025-10-12 11:49:21] 2025-10-12 15:48:39,802 | INFO     | -- intersect: -24865528440.473526
[2025-10-12 11:49:21] 2025-10-12 15:48:39,802 | INFO     | intersect: -24865528440.473526
[2025-10-12 11:49:21] 2025-10-12 15:48:39,802 | INFO     | chi2: 0.33881875282129303
[2025-10-12 11:49:21] 2025-10-12 15:48:39,802 | INFO     | current chi2=0.33881875282129303 (change=24.45721602194924 %)
[2025-10-12 11:49:21] 2025-10-12 15:48:39,803 | INFO     | left removable region: 30
[2025-10-12 11:49:21] 2025-10-12 15:48:39,803 | INFO     | sum of square deviations: 620319322.1587305
[2025-10-12 11:49:21] 2025-10-12 15:48:39,803 | INFO     | sum of deviations: -5773162728.269844
[2025-10-12 11:49:21] 2025-10-12 15:48:39,803 | INFO     | mean x: 1760279854.8253968
[2025-10-12 11:49:21] 2025-10-12 15:48:39,804 | INFO     | mean y: 2647150.396825397
[2025-10-12 11:49:21] 2025-10-12 15:48:39,804 | INFO     | -- intersect: 16385148365.797995
[2025-10-12 11:49:21] 2025-10-12 15:48:39,804 | INFO     | intersect: 16385148365.797995
[2025-10-12 11:49:21] 2025-10-12 15:48:39,804 | INFO     | chi2: 0.005676645011840621
[2025-10-12 11:49:21] 2025-10-12 15:48:39,804 | INFO     | -- intersect: 16385148365.797995
[2025-10-12 11:49:21] 2025-10-12 15:48:39,804 | INFO     | current memory leak: -9.31 B/s (using 126 data points, chi2=0.01)
[2025-10-12 11:49:21] 2025-10-12 15:48:39,809 | INFO     | could have reported an average CPU frequency of 2953 MHz (9 samples)
[2025-10-12 11:49:21] 2025-10-12 15:48:39,809 | INFO     | ..............................
[2025-10-12 11:49:21] 2025-10-12 15:48:39,809 | INFO     | . Timing measurements:
[2025-10-12 11:49:21] 2025-10-12 15:48:39,809 | INFO     | . get job = 0 s
[2025-10-12 11:49:21] 2025-10-12 15:48:39,809 | INFO     | . initial setup = 2 s
[2025-10-12 11:49:21] 2025-10-12 15:48:39,809 | INFO     | . payload setup = 9 s
[2025-10-12 11:49:21] 2025-10-12 15:48:39,809 | INFO     | . stage-in = 0 s
[2025-10-12 11:49:21] 2025-10-12 15:48:39,809 | INFO     | . payload execution = 9886 s
[2025-10-12 11:49:21] 2025-10-12 15:48:39,809 | INFO     | . stage-out = 2 s
[2025-10-12 11:49:21] 2025-10-12 15:48:39,809 | INFO     | . log creation = 0 s
[2025-10-12 11:49:21] 2025-10-12 15:48:39,810 | INFO     | ..............................
[2025-10-12 11:49:21] 2025-10-12 15:48:40,293 | INFO     | 
[2025-10-12 11:49:21] 2025-10-12 15:48:40,293 | INFO     | job summary report
[2025-10-12 11:49:21] 2025-10-12 15:48:40,293 | INFO     | --------------------------------------------------
[2025-10-12 11:49:21] 2025-10-12 15:48:40,293 | INFO     | PanDA job id: 6839588902
[2025-10-12 11:49:21] 2025-10-12 15:48:40,293 | INFO     | task id: 46676269
[2025-10-12 11:49:21] 2025-10-12 15:48:40,293 | INFO     | errors: (none)
[2025-10-12 11:49:21] 2025-10-12 15:48:40,293 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | pilot state: finished 
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | transexitcode: 0
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | exeerrorcode: 0
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | exeerrordiag: 
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | exitcode: 0
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | exitmsg: OK
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | cpuconsumptiontime: 36785 s
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | nevents: 400
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | neventsw: 0
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | pid: 1122844
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | pgrp: 1122844
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | corecount: 11
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | event service: False
[2025-10-12 11:49:21] 2025-10-12 15:48:40,294 | INFO     | sizes: {0: 2348855, 7: 2349117, 11: 2349145, 9900: 2377802, 9901: 2377801, 9903: 2386855, 9906: 2387039, 9925: 2387297}
[2025-10-12 11:49:21] 2025-10-12 15:48:40,295 | INFO     | --------------------------------------------------
[2025-10-12 11:49:21] 2025-10-12 15:48:40,295 | INFO     | 
[2025-10-12 11:49:21] 2025-10-12 15:48:40,295 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 11:49:21] 2025-10-12 15:48:40,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:49:21] 2025-10-12 15:48:40,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,491 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:49:21] 2025-10-12 15:48:40,491 | INFO     | job 6839588902 has completed (purged errors)
[2025-10-12 11:49:21] 2025-10-12 15:48:40,491 | INFO     | overall cleanup function is called
[2025-10-12 11:49:21] 2025-10-12 15:48:41,504 | INFO     | --- collectZombieJob: --- 10, [1122844]
[2025-10-12 11:49:21] 2025-10-12 15:48:41,504 | INFO     | zombie collector waiting for pid 1122844
[2025-10-12 11:49:21] 2025-10-12 15:48:41,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:49:21] 2025-10-12 15:48:41,504 | INFO     | collected zombie processes
[2025-10-12 11:49:21] 2025-10-12 15:48:41,504 | INFO     | will attempt to kill all subprocesses of pid=1122844
[2025-10-12 11:49:21] 2025-10-12 15:48:42,145 | INFO     | process IDs to be killed: [1122844] (in reverse order)
[2025-10-12 11:49:21] 2025-10-12 15:48:42,314 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:49:21] 2025-10-12 15:48:42,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:49:21] 2025-10-12 15:48:42,332 | INFO     | did not find any defunct processes belonging to 1122844
[2025-10-12 11:49:21] 2025-10-12 15:48:42,350 | INFO     | did not find any defunct processes belonging to 1122844
[2025-10-12 11:49:21] 2025-10-12 15:48:42,351 | INFO     | ready for new job
[2025-10-12 11:49:21] 2025-10-12 15:48:42,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:49:21] 2025-10-12 15:48:42,354 | INFO     | ***************************************
[2025-10-12 11:49:21] 2025-10-12 15:48:42,354 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:49:21] 2025-10-12 15:48:42,354 | INFO     | ***************************************
[2025-10-12 11:49:21] 2025-10-12 15:48:42,354 | INFO     | 
[2025-10-12 11:49:21] 2025-10-12 15:48:42,363 | INFO     | architecture information:
[2025-10-12 11:49:21] 2025-10-12 15:48:42,368 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:49:21] 2025-10-12 15:48:42,396 | INFO     | cat /etc/os-release:
[2025-10-12 11:49:21] NAME="CentOS Linux"
[2025-10-12 11:49:21] VERSION="7 (Core)"
[2025-10-12 11:49:21] ID="centos"
[2025-10-12 11:49:21] ID_LIKE="rhel fedora"
[2025-10-12 11:49:21] VERSION_ID="7"
[2025-10-12 11:49:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:49:21] ANSI_COLOR="0;31"
[2025-10-12 11:49:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:49:21] HOME_URL="https://www.centos.org/"
[2025-10-12 11:49:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:49:21] 
[2025-10-12 11:49:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:49:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:49:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:49:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:49:21] 
[2025-10-12 11:49:21] 2025-10-12 15:48:42,397 | INFO     | ***************************************
[2025-10-12 11:49:21] 2025-10-12 15:48:42,900 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 11:49:21] 2025-10-12 15:48:43,021 | INFO     | sufficient remaining disk space (127026593792 B)
[2025-10-12 11:49:21] 2025-10-12 15:48:43,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:49:21] 2025-10-12 15:48:43,021 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:49:21] 2025-10-12 15:48:43,021 | INFO     | update_server=False
[2025-10-12 11:49:21] 2025-10-12 15:48:43,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:49:21] 2025-10-12 15:48:43,284 | INFO     | all data control threads have been joined
[2025-10-12 11:49:21] 2025-10-12 15:48:43,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:49:21] 2025-10-12 15:48:43,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:49:21] 2025-10-12 15:48:43,956 | INFO     | aborting loop
[2025-10-12 11:49:21] 2025-10-12 15:48:43,985 | INFO     | all job control threads have been joined
[2025-10-12 11:49:21] 2025-10-12 15:48:44,027 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:44,115 | INFO     | all payload control threads have been joined
[2025-10-12 11:49:21] 2025-10-12 15:48:44,290 | INFO     | [data] control thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:44,352 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:44,377 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:44,390 | INFO     | [job] validate thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:44,582 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:44,718 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:44,808 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:44,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:49:21] 2025-10-12 15:48:44,844 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:44,965 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:44,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:49:21] 2025-10-12 15:48:44,991 | INFO     | [job] control thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:45,121 | INFO     | [payload] control thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:45,846 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:45,978 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:48,853 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:48:53,907 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:49:21] 2025-10-12 15:48:54,913 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:49:21] 2025-10-12 15:49:12,829 | INFO     | PID=1116101 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:49:21] 2025-10-12 15:49:12,829 | INFO     | .. there are 17 such processes running
[2025-10-12 11:49:21] 2025-10-12 15:49:12,834 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:49:21] 2025-10-12 15:49:12,834 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:49:21] 2025-10-12 15:49:12,834 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:49:21] 2025-10-12 15:49:13,022 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:49:21] 2025-10-12 15:49:14,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692644206400)>', '<ExcThread(monitor, started 140691703322368)>']
[2025-10-12 11:49:21] 2025-10-12 15:49:14,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:49:21] 2025-10-12 15:49:14,861 | INFO     | [monitor] control thread has ended
[2025-10-12 11:49:21] 2025-10-12 15:49:19,303 | INFO     | all workflow threads have been joined
[2025-10-12 11:49:21] 2025-10-12 15:49:19,303 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:49:21] 2025-10-12 15:49:19,303 | INFO     | traces error code: 0
[2025-10-12 11:49:21] 2025-10-12 15:49:19,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:49:21] 2025-10-12 15:49:20,263 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:49:21] 2025-10-12 15:49:20,328 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:49:21] 2025-10-12 15:49:20,338 [wrapper] pilotpid: 1116101
[2025-10-12 11:49:21] 2025-10-12 15:49:20,377 [wrapper] Pilot exit status: 0
[2025-10-12 11:49:21] 2025-10-12 15:49:20,591 [wrapper] pandaids: 6839588902
[2025-10-12 11:49:21] 2025-10-12 15:49:21,301 [wrapper] cleanup supervisor_pilot 1500258 1116102
[2025-10-12 11:49:21] 2025-10-12 15:49:21,325 [wrapper] Test setup, not cleaning
[2025-10-12 11:49:21] 2025-10-12 15:49:21,343 [wrapper] apfmon messages muted
[2025-10-12 11:49:21] 2025-10-12 15:49:21,383 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:49:21] 2025-10-12 15:49:21,439 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:49:21]  *** Error codes and diagnostics ***
[2025-10-12 11:49:21]     "exeErrorCode": 0,
[2025-10-12 11:49:21]     "exeErrorDiag": "",
[2025-10-12 11:49:21]     "pilotErrorCode": 0,
[2025-10-12 11:49:21]     "pilotErrorDiag": "",
[2025-10-12 11:49:21]  *** Listing of results directory ***
[2025-10-12 11:49:21] total 408600
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 01:26 pilot3.tar.gz
[2025-10-12 11:49:21] -rwx------. 1 boincer umatlas     36292 Oct 12 01:38 runpilot2-wrapper.sh
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 01:38 queuedata.json
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas       100 Oct 12 09:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:49:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 09:02 run_atlas
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas       105 Oct 12 09:02 job.xml
[2025-10-12 11:49:21] -rw-r--r--. 2 boincer umatlas 219971807 Oct 12 09:02 EVNT.46676267._004327.pool.root.1
[2025-10-12 11:49:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 09:02 start_atlas.sh
[2025-10-12 11:49:21] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 09:02 shared
[2025-10-12 11:49:21] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 09:02 input.tar.gz
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas         0 Oct 12 09:02 boinc_lockfile
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 09:02 pandaJob.out
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas    975512 Oct 12 09:02 agis_schedconf.cvmfs.json
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:49:21] drwx------. 5 boincer umatlas      4096 Oct 12 09:02 pilot3
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas      6945 Oct 12 11:39 init_data.xml
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas 190920449 Oct 12 11:47 HITS.46676269._072094.pool.root.1
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas       530 Oct 12 11:47 boinc_task_state.xml
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas      1045 Oct 12 11:48 memory_monitor_summary.json
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas    433756 Oct 12 11:48 log.46676269._072094.job.log.tgz.1
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas      7794 Oct 12 11:48 heartbeat.json
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas        95 Oct 12 11:49 pilot_heartbeat.json
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas        27 Oct 12 11:49 wrapper_checkpoint.txt
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:49 boinc_mmap_file
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas      4897 Oct 12 11:49 pilotlog.txt
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas   1372068 Oct 12 11:49 log.46676269._072094.job.log.1
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas       357 Oct 12 11:49 output.list
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:49 runtime_log
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas   1822720 Oct 12 11:49 result.tar.gz
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas      8701 Oct 12 11:49 runtime_log.err
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas       657 Oct 12 11:49 AWXMDm4x3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsliNDmCysL0m.diag
[2025-10-12 11:49:21] -rw-r--r--. 1 boincer umatlas     20985 Oct 12 11:49 stderr.txt
[2025-10-12 11:49:21] HITS file was successfully produced:
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas 190920449 Oct 12 11:47 shared/HITS.pool.root.1
[2025-10-12 11:49:21]  *** Contents of shared directory: ***
[2025-10-12 11:49:21] total 403632
[2025-10-12 11:49:21] -rw-r--r--. 2 boincer umatlas 219971807 Oct 12 09:02 ATLAS.root_0
[2025-10-12 11:49:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 09:02 start_atlas.sh
[2025-10-12 11:49:21] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 09:02 input.tar.gz
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas 190920449 Oct 12 11:47 HITS.pool.root.1
[2025-10-12 11:49:21] -rw-------. 1 boincer umatlas   1822720 Oct 12 11:49 result.tar.gz
11:49:23 (1112388): run_atlas exited; CPU time 37102.683342
11:49:23 (1112388): called boinc_finish(0)

</stderr_txt>
]]>

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