Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:06:35 (3911685): wrapper (7.7.26015): starting
07:06:35 (3911685): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 07:06:35] Arguments: --nthreads 9
[2025-10-12 07:06:35] Threads: 9
[2025-10-12 07:06:35] Checking for CVMFS
[2025-10-12 07:06:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:06:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:06:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:06:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:06:37] 2.13.2.0 126724 124960 306344 151618 2 183 19803869 32935936 39857 16776704 1 291197590 99.673 266036506 20707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 07:06:37] CVMFS is ok
[2025-10-12 07:06:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:06:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:06:37] Further information can be found at the LHC@home message board.
[2025-10-12 07:06:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:06:37] Checking for apptainer binary...
[2025-10-12 07:06:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:06:37] Running /usr/bin/apptainer --version
[2025-10-12 07:06:37] apptainer version 1.4.3-1.el9
[2025-10-12 07:06:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:06:38] c6-12-27-3.aglt2.org
[2025-10-12 07:06:38] apptainer works
[2025-10-12 07:06:38] Set ATHENA_PROC_NUMBER=9
[2025-10-12 07:06:38] Set ATHENA_CORE_NUMBER=9
[2025-10-12 07:06:38] Starting ATLAS job with PandaID=6839317669
[2025-10-12 07:06:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:34:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:34:54] 2025-10-12 14:34:11,589 | INFO     | -- intersect: -35102017770.11027
[2025-10-12 10:34:54] 2025-10-12 14:34:11,589 | INFO     | intersect: -35102017770.11027
[2025-10-12 10:34:54] 2025-10-12 14:34:11,590 | INFO     | chi2: 2.720320118771867
[2025-10-12 10:34:54] 2025-10-12 14:34:11,590 | INFO     | sum of square deviations: 2334898459.5254984
[2025-10-12 10:34:54] 2025-10-12 14:34:11,591 | INFO     | sum of deviations: 51232209544.32147
[2025-10-12 10:34:54] 2025-10-12 14:34:11,591 | INFO     | mean x: 1760273298.0867348
[2025-10-12 10:34:54] 2025-10-12 14:34:11,592 | INFO     | mean y: 2151763.3928571427
[2025-10-12 10:34:54] 2025-10-12 14:34:11,592 | INFO     | -- intersect: -38621665086.09039
[2025-10-12 10:34:54] 2025-10-12 14:34:11,592 | INFO     | intersect: -38621665086.09039
[2025-10-12 10:34:54] 2025-10-12 14:34:11,600 | INFO     | chi2: 2.7001208817282145
[2025-10-12 10:34:54] 2025-10-12 14:34:11,600 | INFO     | current chi2=2.7001208817282145 (change=0.7425316198731727 %)
[2025-10-12 10:34:54] 2025-10-12 14:34:11,601 | INFO     | right removable region: 195
[2025-10-12 10:34:54] 2025-10-12 14:34:11,601 | INFO     | sum of square deviations: 2334863627.9591703
[2025-10-12 10:34:54] 2025-10-12 14:34:11,602 | INFO     | sum of deviations: 11502076532.530619
[2025-10-12 10:34:54] 2025-10-12 14:34:11,602 | INFO     | mean x: 1760273603.1020408
[2025-10-12 10:34:54] 2025-10-12 14:34:11,602 | INFO     | mean y: 2182967.923469388
[2025-10-12 10:34:54] 2025-10-12 14:34:11,602 | INFO     | -- intersect: -8669330630.825844
[2025-10-12 10:34:54] 2025-10-12 14:34:11,602 | INFO     | intersect: -8669330630.825844
[2025-10-12 10:34:54] 2025-10-12 14:34:11,603 | INFO     | chi2: 0.625144535867077
[2025-10-12 10:34:54] 2025-10-12 14:34:11,603 | INFO     | current chi2=0.625144535867077 (change=77.01944960252293 %)
[2025-10-12 10:34:54] 2025-10-12 14:34:11,603 | INFO     | sum of square deviations: 2160678431.3298426
[2025-10-12 10:34:54] 2025-10-12 14:34:11,629 | INFO     | sum of deviations: -8221071568.450261
[2025-10-12 10:34:54] 2025-10-12 14:34:11,630 | INFO     | mean x: 1760273755.6125655
[2025-10-12 10:34:54] 2025-10-12 14:34:11,630 | INFO     | mean y: 2200179.0209424086
[2025-10-12 10:34:54] 2025-10-12 14:34:11,630 | INFO     | -- intersect: 6699789378.376668
[2025-10-12 10:34:54] 2025-10-12 14:34:11,630 | INFO     | intersect: 6699789378.376668
[2025-10-12 10:34:54] 2025-10-12 14:34:11,630 | INFO     | chi2: 0.11588827481294266
[2025-10-12 10:34:54] 2025-10-12 14:34:11,630 | INFO     | current chi2=0.11588827481294266 (change=81.46216304167079 %)
[2025-10-12 10:34:54] 2025-10-12 14:34:11,631 | INFO     | sum of square deviations: 1995388285.3978457
[2025-10-12 10:34:54] 2025-10-12 14:34:11,632 | INFO     | sum of deviations: -10624127221.182795
[2025-10-12 10:34:54] 2025-10-12 14:34:11,632 | INFO     | mean x: 1760273908.1182795
[2025-10-12 10:34:54] 2025-10-12 14:34:11,632 | INFO     | mean y: 2202354.053763441
[2025-10-12 10:34:54] 2025-10-12 14:34:11,632 | INFO     | -- intersect: 9374500508.16892
[2025-10-12 10:34:54] 2025-10-12 14:34:11,632 | INFO     | intersect: 9374500508.16892
[2025-10-12 10:34:54] 2025-10-12 14:34:11,632 | INFO     | chi2: 0.08245391674176446
[2025-10-12 10:34:54] 2025-10-12 14:34:11,633 | INFO     | current chi2=0.08245391674176446 (change=28.850509790697288 %)
[2025-10-12 10:34:54] 2025-10-12 14:34:11,647 | INFO     | sum of square deviations: 1838727015.9337027
[2025-10-12 10:34:54] 2025-10-12 14:34:11,648 | INFO     | sum of deviations: -10774367533.27072
[2025-10-12 10:34:54] 2025-10-12 14:34:11,648 | INFO     | mean x: 1760274060.635359
[2025-10-12 10:34:54] 2025-10-12 14:34:11,648 | INFO     | mean y: 2202502.0110497237
[2025-10-12 10:34:54] 2025-10-12 14:34:11,649 | INFO     | -- intersect: 10316860156.038828
[2025-10-12 10:34:54] 2025-10-12 14:34:11,649 | INFO     | intersect: 10316860156.038828
[2025-10-12 10:34:54] 2025-10-12 14:34:11,649 | INFO     | chi2: 0.07940878983927063
[2025-10-12 10:34:54] 2025-10-12 14:34:11,649 | INFO     | current chi2=0.07940878983927063 (change=3.6931258366182753 %)
[2025-10-12 10:34:54] 2025-10-12 14:34:11,649 | INFO     | left removable region: 40
[2025-10-12 10:34:54] 2025-10-12 14:34:11,649 | INFO     | sum of square deviations: 1154636285.1354825
[2025-10-12 10:34:54] 2025-10-12 14:34:11,650 | INFO     | sum of deviations: -6104933333.658065
[2025-10-12 10:34:54] 2025-10-12 14:34:11,650 | INFO     | mean x: 1760274487.6903226
[2025-10-12 10:34:54] 2025-10-12 14:34:11,650 | INFO     | mean y: 2202634.3612903226
[2025-10-12 10:34:54] 2025-10-12 14:34:11,651 | INFO     | -- intersect: 9309339898.826843
[2025-10-12 10:34:54] 2025-10-12 14:34:11,651 | INFO     | intersect: 9309339898.826843
[2025-10-12 10:34:54] 2025-10-12 14:34:11,678 | INFO     | chi2: 0.05294164549078776
[2025-10-12 10:34:54] 2025-10-12 14:34:11,678 | INFO     | -- intersect: 9309339898.826843
[2025-10-12 10:34:54] 2025-10-12 14:34:11,679 | INFO     | current memory leak: -5.29 B/s (using 155 data points, chi2=0.05)
[2025-10-12 10:34:54] 2025-10-12 14:34:11,679 | INFO     | could have reported an average CPU frequency of 2624 MHz (10 samples)
[2025-10-12 10:34:54] 2025-10-12 14:34:11,679 | INFO     | ..............................
[2025-10-12 10:34:54] 2025-10-12 14:34:11,679 | INFO     | . Timing measurements:
[2025-10-12 10:34:54] 2025-10-12 14:34:11,680 | INFO     | . get job = 0 s
[2025-10-12 10:34:54] 2025-10-12 14:34:11,680 | INFO     | . initial setup = 5 s
[2025-10-12 10:34:54] 2025-10-12 14:34:11,680 | INFO     | . payload setup = 23 s
[2025-10-12 10:34:54] 2025-10-12 14:34:11,680 | INFO     | . stage-in = 0 s
[2025-10-12 10:34:54] 2025-10-12 14:34:11,680 | INFO     | . payload execution = 12276 s
[2025-10-12 10:34:54] 2025-10-12 14:34:11,680 | INFO     | . stage-out = 5 s
[2025-10-12 10:34:54] 2025-10-12 14:34:11,680 | INFO     | . log creation = 0 s
[2025-10-12 10:34:54] 2025-10-12 14:34:11,680 | INFO     | ..............................
[2025-10-12 10:34:54] 2025-10-12 14:34:11,934 | INFO     | 
[2025-10-12 10:34:54] 2025-10-12 14:34:11,935 | INFO     | job summary report
[2025-10-12 10:34:54] 2025-10-12 14:34:11,935 | INFO     | --------------------------------------------------
[2025-10-12 10:34:54] 2025-10-12 14:34:11,935 | INFO     | PanDA job id: 6839317669
[2025-10-12 10:34:54] 2025-10-12 14:34:11,935 | INFO     | task id: 46676269
[2025-10-12 10:34:54] 2025-10-12 14:34:11,935 | INFO     | errors: (none)
[2025-10-12 10:34:54] 2025-10-12 14:34:11,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:34:54] 2025-10-12 14:34:11,935 | INFO     | pilot state: finished 
[2025-10-12 10:34:54] 2025-10-12 14:34:11,935 | INFO     | transexitcode: 0
[2025-10-12 10:34:54] 2025-10-12 14:34:11,935 | INFO     | exeerrorcode: 0
[2025-10-12 10:34:54] 2025-10-12 14:34:11,935 | INFO     | exeerrordiag: 
[2025-10-12 10:34:54] 2025-10-12 14:34:11,935 | INFO     | exitcode: 0
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | exitmsg: OK
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | cpuconsumptiontime: 42969 s
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | nevents: 400
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | neventsw: 0
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | pid: 3935717
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | pgrp: 3935717
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | corecount: 9
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | event service: False
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | sizes: {0: 2348628, 1: 2348712, 2: 2348911, 13: 2348911, 24: 2349257, 35: 2349257, 12304: 2373774, 12305: 2373773, 12311: 2382827, 12314: 2382883, 12350: 2383077}
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | --------------------------------------------------
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | 
[2025-10-12 10:34:54] 2025-10-12 14:34:11,936 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 10:34:54] 2025-10-12 14:34:12,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:34:54] 2025-10-12 14:34:12,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,028 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:34:54] 2025-10-12 14:34:12,028 | INFO     | job 6839317669 has completed (purged errors)
[2025-10-12 10:34:54] 2025-10-12 14:34:12,028 | INFO     | overall cleanup function is called
[2025-10-12 10:34:54] 2025-10-12 14:34:13,041 | INFO     | --- collectZombieJob: --- 10, [3935717]
[2025-10-12 10:34:54] 2025-10-12 14:34:13,041 | INFO     | zombie collector waiting for pid 3935717
[2025-10-12 10:34:54] 2025-10-12 14:34:13,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:34:54] 2025-10-12 14:34:13,041 | INFO     | collected zombie processes
[2025-10-12 10:34:54] 2025-10-12 14:34:13,042 | INFO     | will attempt to kill all subprocesses of pid=3935717
[2025-10-12 10:34:54] 2025-10-12 14:34:14,461 | INFO     | process IDs to be killed: [3935717] (in reverse order)
[2025-10-12 10:34:54] 2025-10-12 14:34:14,611 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:34:54] 2025-10-12 14:34:14,611 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:34:54] 2025-10-12 14:34:14,636 | INFO     | did not find any defunct processes belonging to 3935717
[2025-10-12 10:34:54] 2025-10-12 14:34:14,675 | INFO     | did not find any defunct processes belonging to 3935717
[2025-10-12 10:34:54] 2025-10-12 14:34:14,676 | INFO     | ready for new job
[2025-10-12 10:34:54] 2025-10-12 14:34:14,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:34:54] 2025-10-12 14:34:14,691 | INFO     | ***************************************
[2025-10-12 10:34:54] 2025-10-12 14:34:14,691 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:34:54] 2025-10-12 14:34:14,691 | INFO     | ***************************************
[2025-10-12 10:34:54] 2025-10-12 14:34:14,691 | INFO     | 
[2025-10-12 10:34:54] 2025-10-12 14:34:14,723 | INFO     | architecture information:
[2025-10-12 10:34:54] 2025-10-12 14:34:14,727 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:34:54] 2025-10-12 14:34:14,820 | INFO     | cat /etc/os-release:
[2025-10-12 10:34:54] NAME="CentOS Linux"
[2025-10-12 10:34:54] VERSION="7 (Core)"
[2025-10-12 10:34:54] ID="centos"
[2025-10-12 10:34:54] ID_LIKE="rhel fedora"
[2025-10-12 10:34:54] VERSION_ID="7"
[2025-10-12 10:34:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:34:54] ANSI_COLOR="0;31"
[2025-10-12 10:34:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:34:54] HOME_URL="https://www.centos.org/"
[2025-10-12 10:34:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:34:54] 
[2025-10-12 10:34:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:34:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:34:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:34:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:34:54] 
[2025-10-12 10:34:54] 2025-10-12 14:34:14,821 | INFO     | ***************************************
[2025-10-12 10:34:54] 2025-10-12 14:34:15,324 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 10:34:54] 2025-10-12 14:34:15,445 | INFO     | sufficient remaining disk space (93949263872 B)
[2025-10-12 10:34:54] 2025-10-12 14:34:15,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:34:54] 2025-10-12 14:34:15,446 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:34:54] 2025-10-12 14:34:15,446 | INFO     | update_server=False
[2025-10-12 10:34:54] 2025-10-12 14:34:15,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:34:54] 2025-10-12 14:34:15,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:34:54] 2025-10-12 14:34:15,447 | INFO     | aborting loop
[2025-10-12 10:34:54] 2025-10-12 14:34:15,502 | INFO     | all data control threads have been joined
[2025-10-12 10:34:54] 2025-10-12 14:34:15,508 | INFO     | all payload control threads have been joined
[2025-10-12 10:34:54] 2025-10-12 14:34:15,811 | INFO     | all job control threads have been joined
[2025-10-12 10:34:54] 2025-10-12 14:34:16,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:34:54] 2025-10-12 14:34:16,451 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:16,453 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:16,488 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:16,492 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:16,508 | INFO     | [data] control thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:16,514 | INFO     | [payload] control thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:16,817 | INFO     | [job] control thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:16,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:34:54] 2025-10-12 14:34:16,978 | INFO     | [job] validate thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:17,002 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:17,019 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:17,080 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:17,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:17,322 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:17,965 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:18,170 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:18,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:34:54] 2025-10-12 14:34:22,814 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:34:54] 2025-10-12 14:34:44,584 | INFO     | PID=3919305 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:34:54] 2025-10-12 14:34:44,584 | INFO     | .. there are 49 such processes running
[2025-10-12 10:34:54] 2025-10-12 14:34:44,584 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:34:54] 2025-10-12 14:34:44,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:34:54] 2025-10-12 14:34:44,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:34:54] 2025-10-12 14:34:45,263 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:34:54] 2025-10-12 14:34:47,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140537615144768)>', '<ExcThread(monitor, started 140536740562688)>']
[2025-10-12 10:34:54] 2025-10-12 14:34:47,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:34:54] 2025-10-12 14:34:47,602 | INFO     | [monitor] control thread has ended
[2025-10-12 10:34:54] 2025-10-12 14:34:52,362 | INFO     | all workflow threads have been joined
[2025-10-12 10:34:54] 2025-10-12 14:34:52,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:34:54] 2025-10-12 14:34:52,363 | INFO     | traces error code: 0
[2025-10-12 10:34:54] 2025-10-12 14:34:52,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:34:54] 2025-10-12 14:34:53,551 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:34:54] 2025-10-12 14:34:53,569 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:34:54] 2025-10-12 14:34:53,582 [wrapper] pilotpid: 3919305
[2025-10-12 10:34:54] 2025-10-12 14:34:53,606 [wrapper] Pilot exit status: 0
[2025-10-12 10:34:54] 2025-10-12 14:34:53,734 [wrapper] pandaids: 6839317669
[2025-10-12 10:34:54] 2025-10-12 14:34:53,969 [wrapper] cleanup supervisor_pilot  490769 3919306
[2025-10-12 10:34:54] 2025-10-12 14:34:53,982 [wrapper] Test setup, not cleaning
[2025-10-12 10:34:54] 2025-10-12 14:34:53,991 [wrapper] apfmon messages muted
[2025-10-12 10:34:54] 2025-10-12 14:34:54,014 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:34:54] 2025-10-12 14:34:54,038 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:34:54]  *** Error codes and diagnostics ***
[2025-10-12 10:34:54]     "exeErrorCode": 0,
[2025-10-12 10:34:54]     "exeErrorDiag": "",
[2025-10-12 10:34:54]     "pilotErrorCode": 0,
[2025-10-12 10:34:54]     "pilotErrorDiag": "",
[2025-10-12 10:34:54]  *** Listing of results directory ***
[2025-10-12 10:34:54] total 412268
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 22:56 pilot3.tar.gz
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 23:00 queuedata.json
[2025-10-12 10:34:54] -rwx------. 1 boincer umatlas     36292 Oct 11 23:00 runpilot2-wrapper.sh
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas       100 Oct 12 07:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:34:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 07:06 run_atlas
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas       105 Oct 12 07:06 job.xml
[2025-10-12 10:34:54] -rw-r--r--. 2 boincer umatlas 223691942 Oct 12 07:06 EVNT.46676267._003198.pool.root.1
[2025-10-12 10:34:54] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 07:06 input.tar.gz
[2025-10-12 10:34:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:06 start_atlas.sh
[2025-10-12 10:34:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 07:06 shared
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas         0 Oct 12 07:06 boinc_lockfile
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 07:06 pandaJob.out
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas    975520 Oct 12 07:07 agis_schedconf.cvmfs.json
[2025-10-12 10:34:54] drwx------. 5 boincer umatlas      4096 Oct 12 07:07 pilot3
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas      6861 Oct 12 10:30 init_data.xml
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas 190711504 Oct 12 10:32 HITS.46676269._069708.pool.root.1
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas       530 Oct 12 10:32 boinc_task_state.xml
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas      1044 Oct 12 10:33 memory_monitor_summary.json
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas    424526 Oct 12 10:33 log.46676269._069708.job.log.tgz.1
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas        95 Oct 12 10:33 pilot_heartbeat.json
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas      6217 Oct 12 10:34 heartbeat.json
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:34 boinc_mmap_file
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas        28 Oct 12 10:34 wrapper_checkpoint.txt
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas      4824 Oct 12 10:34 pilotlog.txt
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas   1500077 Oct 12 10:34 log.46676269._069708.job.log.1
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas       357 Oct 12 10:34 output.list
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:34 runtime_log
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas   1945600 Oct 12 10:34 result.tar.gz
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 10:34 runtime_log.err
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas       657 Oct 12 10:34 oXnLDmFV1R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZ3SMDm68FmOm.diag
[2025-10-12 10:34:54] -rw-r--r--. 1 boincer umatlas     21037 Oct 12 10:34 stderr.txt
[2025-10-12 10:34:54] HITS file was successfully produced:
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas 190711504 Oct 12 10:32 shared/HITS.pool.root.1
[2025-10-12 10:34:54]  *** Contents of shared directory: ***
[2025-10-12 10:34:54] total 407180
[2025-10-12 10:34:54] -rw-r--r--. 2 boincer umatlas 223691942 Oct 12 07:06 ATLAS.root_0
[2025-10-12 10:34:54] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 07:06 input.tar.gz
[2025-10-12 10:34:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:06 start_atlas.sh
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas 190711504 Oct 12 10:32 HITS.pool.root.1
[2025-10-12 10:34:54] -rw-------. 1 boincer umatlas   1945600 Oct 12 10:34 result.tar.gz
10:34:55 (3911685): run_atlas exited; CPU time 43529.013158
10:34:55 (3911685): called boinc_finish(0)

</stderr_txt>
]]>

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