Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:02:55 (28061): wrapper (7.7.26015): starting
07:02:55 (28061): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 07:02:55] Arguments: --nthreads 12
[2025-10-12 07:02:55] Threads: 12
[2025-10-12 07:02:55] Checking for CVMFS
[2025-10-12 07:02:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:02:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:02:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:02:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:02:55] 2.11.2.0 3035 222750 95792 151617 0 59 14920958 20275200 1 130560 3 108077739 99.984 13648916 12612 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:02:55] CVMFS is ok
[2025-10-12 07:02:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:02:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:02:55] Further information can be found at the LHC@home message board.
[2025-10-12 07:02:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:02:55] Checking for apptainer binary...
[2025-10-12 07:02:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:02:55] Running /usr/bin/apptainer --version
[2025-10-12 07:02:55] apptainer version 1.3.2-1.el7
[2025-10-12 07:02:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:02:57] c-205-31.aglt2.org
[2025-10-12 07:02:57] apptainer works
[2025-10-12 07:02:57] Set ATHENA_PROC_NUMBER=12
[2025-10-12 07:02:57] Set ATHENA_CORE_NUMBER=12
[2025-10-12 07:02:57] Starting ATLAS job with PandaID=6839590621
[2025-10-12 07:02:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:12:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:12:25]  mtime=0
[2025-10-12 08:12:25]  protocol_id=None
[2025-10-12 08:12:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 08:12:25]  replicas=None
[2025-10-12 08:12:25]  scope=mc23_13p6TeV
[2025-10-12 08:12:25]  status=None
[2025-10-12 08:12:25]  status_code=0
[2025-10-12 08:12:25]  storage_token=
[2025-10-12 08:12:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839590621/log.46676269._072190.job.log.tgz.1
[2025-10-12 08:12:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/72/log.46676269._072190.job.log.tgz.1
[2025-10-12 08:12:25]  workdir=None
[2025-10-12 08:12:25] ]
[2025-10-12 08:12:25] 2025-10-12 12:11:25,157 | INFO     | transferring file log.46676269._072190.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839590621/log.46676269._072190.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 08:12:25] 2025-10-12 12:11:25,157 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839590621/log.46676269._072190.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._072190.job
[2025-10-12 08:12:25] 2025-10-12 12:11:25,179 | INFO     | adding to output.list: log.46676269._072190.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/72/log.46676269._072190.job.log.tg
[2025-10-12 08:12:25] 2025-10-12 12:11:25,180 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 08:12:25] 2025-10-12 12:11:25,180 | INFO     | summary of transferred files:
[2025-10-12 08:12:25] 2025-10-12 12:11:25,181 | INFO     |  -- lfn=log.46676269._072190.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 08:12:25] 2025-10-12 12:11:25,181 | INFO     | stage-out finished correctly
[2025-10-12 08:12:25] 2025-10-12 12:11:25,266 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 08:12:25] 2025-10-12 12:11:25,429 | INFO     | time since job start (4093s) is within the limit (172800.0s)
[2025-10-12 08:12:25] 2025-10-12 12:11:26,242 | INFO     | job 6839590621 has state=finished
[2025-10-12 08:12:25] 2025-10-12 12:11:26,242 | INFO     | preparing for final server update for job 6839590621 in state='finished'
[2025-10-12 08:12:25] 2025-10-12 12:11:26,242 | INFO     | this job has now completed (state=finished)
[2025-10-12 08:12:25] 2025-10-12 12:11:26,243 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 08:12:25] 2025-10-12 12:11:26,243 | INFO     | log transfer has been attempted: DONE
[2025-10-12 08:12:25] 2025-10-12 12:11:26,243 | INFO     | job 6839590621 has finished - writing final server update
[2025-10-12 08:12:25] 2025-10-12 12:11:26,243 | INFO     | total number of processed events: 400 (read)
[2025-10-12 08:12:25] 2025-10-12 12:11:26,245 | INFO     | executing command: lscpu
[2025-10-12 08:12:25] 2025-10-12 12:11:26,272 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 08:12:25] 2025-10-12 12:11:26,679 | INFO     | monitor loop #306: job 0:6839590621 is in state 'finished'
[2025-10-12 08:12:25] 2025-10-12 12:11:26,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:12:25] 2025-10-12 12:11:27,435 | INFO     | time since job start (4095s) is within the limit (172800.0s)
[2025-10-12 08:12:25] 2025-10-12 12:11:29,182 | INFO     | monitor loop #307: job 0:6839590621 is in state 'finished'
[2025-10-12 08:12:25] 2025-10-12 12:11:29,182 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:12:25] 2025-10-12 12:11:29,441 | INFO     | time since job start (4097s) is within the limit (172800.0s)
[2025-10-12 08:12:25] 2025-10-12 12:11:30,965 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 08:12:25] 2025-10-12 12:11:30,969 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-12 08:12:25] 2025-10-12 12:11:30,972 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839590621/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:12:25] 2025-10-12 12:11:30,973 | INFO     | extracted standard info from prmon json
[2025-10-12 08:12:25] 2025-10-12 12:11:30,973 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:12:25] 2025-10-12 12:11:30,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:12:25] 2025-10-12 12:11:30,973 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:12:25] 2025-10-12 12:11:30,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:12:25] 2025-10-12 12:11:30,975 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:12:25] 2025-10-12 12:11:30,976 | INFO     | sum of square deviations: 66959395.0
[2025-10-12 08:12:25] 2025-10-12 12:11:30,976 | INFO     | sum of deviations: -2083760366.0
[2025-10-12 08:12:25] 2025-10-12 12:11:30,976 | INFO     | mean x: 1760269125.5
[2025-10-12 08:12:25] 2025-10-12 12:11:30,976 | INFO     | mean y: 2689434.933333333
[2025-10-12 08:12:25] 2025-10-12 12:11:30,976 | INFO     | -- intersect: 54781843834.55686
[2025-10-12 08:12:25] 2025-10-12 12:11:30,976 | INFO     | intersect: 54781843834.55686
[2025-10-12 08:12:25] 2025-10-12 12:11:30,977 | INFO     | chi2: 0.041621818807193935
[2025-10-12 08:12:25] 2025-10-12 12:11:30,977 | INFO     | -- intersect: 54781843834.55686
[2025-10-12 08:12:25] 2025-10-12 12:11:30,977 | INFO     | current memory leak: -31.12 B/s (using 60 data points, chi2=0.04)
[2025-10-12 08:12:25] 2025-10-12 12:11:30,977 | INFO     | could have reported an average CPU frequency of 2050 MHz (6 samples)
[2025-10-12 08:12:25] 2025-10-12 12:11:30,977 | INFO     | ..............................
[2025-10-12 08:12:25] 2025-10-12 12:11:30,977 | INFO     | . Timing measurements:
[2025-10-12 08:12:25] 2025-10-12 12:11:30,978 | INFO     | . get job = 0 s
[2025-10-12 08:12:25] 2025-10-12 12:11:30,978 | INFO     | . initial setup = 2 s
[2025-10-12 08:12:25] 2025-10-12 12:11:30,978 | INFO     | . payload setup = 7 s
[2025-10-12 08:12:25] 2025-10-12 12:11:30,978 | INFO     | . stage-in = 0 s
[2025-10-12 08:12:25] 2025-10-12 12:11:30,978 | INFO     | . payload execution = 4063 s
[2025-10-12 08:12:25] 2025-10-12 12:11:30,978 | INFO     | . stage-out = 0 s
[2025-10-12 08:12:25] 2025-10-12 12:11:30,978 | INFO     | . log creation = 0 s
[2025-10-12 08:12:25] 2025-10-12 12:11:30,978 | INFO     | ..............................
[2025-10-12 08:12:25] 2025-10-12 12:11:31,189 | INFO     | 
[2025-10-12 08:12:25] 2025-10-12 12:11:31,190 | INFO     | job summary report
[2025-10-12 08:12:25] 2025-10-12 12:11:31,190 | INFO     | --------------------------------------------------
[2025-10-12 08:12:25] 2025-10-12 12:11:31,190 | INFO     | PanDA job id: 6839590621
[2025-10-12 08:12:25] 2025-10-12 12:11:31,190 | INFO     | task id: 46676269
[2025-10-12 08:12:25] 2025-10-12 12:11:31,190 | INFO     | errors: (none)
[2025-10-12 08:12:25] 2025-10-12 12:11:31,190 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:12:25] 2025-10-12 12:11:31,191 | INFO     | pilot state: finished 
[2025-10-12 08:12:25] 2025-10-12 12:11:31,191 | INFO     | transexitcode: 0
[2025-10-12 08:12:25] 2025-10-12 12:11:31,191 | INFO     | exeerrorcode: 0
[2025-10-12 08:12:25] 2025-10-12 12:11:31,191 | INFO     | exeerrordiag: 
[2025-10-12 08:12:25] 2025-10-12 12:11:31,191 | INFO     | exitcode: 0
[2025-10-12 08:12:25] 2025-10-12 12:11:31,191 | INFO     | exitmsg: OK
[2025-10-12 08:12:25] 2025-10-12 12:11:31,192 | INFO     | cpuconsumptiontime: 44211 s
[2025-10-12 08:12:25] 2025-10-12 12:11:31,192 | INFO     | nevents: 400
[2025-10-12 08:12:25] 2025-10-12 12:11:31,192 | INFO     | neventsw: 0
[2025-10-12 08:12:25] 2025-10-12 12:11:31,192 | INFO     | pid: 5864
[2025-10-12 08:12:25] 2025-10-12 12:11:31,192 | INFO     | pgrp: 5864
[2025-10-12 08:12:25] 2025-10-12 12:11:31,192 | INFO     | corecount: 12
[2025-10-12 08:12:25] 2025-10-12 12:11:31,193 | INFO     | event service: False
[2025-10-12 08:12:25] 2025-10-12 12:11:31,193 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4074: 2375047, 4076: 2384101, 4082: 2384239}
[2025-10-12 08:12:25] 2025-10-12 12:11:31,193 | INFO     | --------------------------------------------------
[2025-10-12 08:12:25] 2025-10-12 12:11:31,193 | INFO     | 
[2025-10-12 08:12:25] 2025-10-12 12:11:31,193 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 08:12:25] 2025-10-12 12:11:31,219 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,219 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,220 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,222 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,222 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:12:25] 2025-10-12 12:11:31,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,222 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:12:25] 2025-10-12 12:11:31,223 | INFO     | job 6839590621 has completed (purged errors)
[2025-10-12 08:12:25] 2025-10-12 12:11:31,223 | INFO     | overall cleanup function is called
[2025-10-12 08:12:25] 2025-10-12 12:11:32,227 | INFO     | --- collectZombieJob: --- 10, [5864]
[2025-10-12 08:12:25] 2025-10-12 12:11:32,227 | INFO     | zombie collector waiting for pid 5864
[2025-10-12 08:12:25] 2025-10-12 12:11:32,227 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:12:25] 2025-10-12 12:11:32,227 | INFO     | collected zombie processes
[2025-10-12 08:12:25] 2025-10-12 12:11:32,227 | INFO     | will attempt to kill all subprocesses of pid=5864
[2025-10-12 08:12:25] 2025-10-12 12:11:32,319 | INFO     | process IDs to be killed: [5864] (in reverse order)
[2025-10-12 08:12:25] 2025-10-12 12:11:32,369 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:12:25] 2025-10-12 12:11:32,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:12:25] 2025-10-12 12:11:32,372 | INFO     | did not find any defunct processes belonging to 5864
[2025-10-12 08:12:25] 2025-10-12 12:11:32,375 | INFO     | did not find any defunct processes belonging to 5864
[2025-10-12 08:12:25] 2025-10-12 12:11:32,375 | INFO     | ready for new job
[2025-10-12 08:12:25] 2025-10-12 12:11:32,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:12:25] 2025-10-12 12:11:32,377 | INFO     | ***************************************
[2025-10-12 08:12:25] 2025-10-12 12:11:32,377 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:12:25] 2025-10-12 12:11:32,377 | INFO     | ***************************************
[2025-10-12 08:12:25] 2025-10-12 12:11:32,377 | INFO     | 
[2025-10-12 08:12:25] 2025-10-12 12:11:32,377 | INFO     | architecture information:
[2025-10-12 08:12:25] 2025-10-12 12:11:32,378 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:12:25] 2025-10-12 12:11:32,394 | INFO     | cat /etc/os-release:
[2025-10-12 08:12:25] NAME="CentOS Linux"
[2025-10-12 08:12:25] VERSION="7 (Core)"
[2025-10-12 08:12:25] ID="centos"
[2025-10-12 08:12:25] ID_LIKE="rhel fedora"
[2025-10-12 08:12:25] VERSION_ID="7"
[2025-10-12 08:12:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:12:25] ANSI_COLOR="0;31"
[2025-10-12 08:12:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:12:25] HOME_URL="https://www.centos.org/"
[2025-10-12 08:12:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:12:25] 
[2025-10-12 08:12:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:12:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:12:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:12:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:12:25] 
[2025-10-12 08:12:25] 2025-10-12 12:11:32,394 | INFO     | ***************************************
[2025-10-12 08:12:25] 2025-10-12 12:11:32,897 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 08:12:25] 2025-10-12 12:11:32,915 | INFO     | sufficient remaining disk space (29371662336 B)
[2025-10-12 08:12:25] 2025-10-12 12:11:32,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:12:25] 2025-10-12 12:11:32,915 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:12:25] 2025-10-12 12:11:32,915 | INFO     | update_server=False
[2025-10-12 08:12:25] 2025-10-12 12:11:32,916 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:12:25] 2025-10-12 12:11:32,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:12:25] 2025-10-12 12:11:32,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:12:25] 2025-10-12 12:11:32,916 | INFO     | aborting loop
[2025-10-12 08:12:25] 2025-10-12 12:11:33,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:12:25] 2025-10-12 12:11:33,543 | INFO     | all data control threads have been joined
[2025-10-12 08:12:25] 2025-10-12 12:11:33,589 | INFO     | all payload control threads have been joined
[2025-10-12 08:12:25] 2025-10-12 12:11:33,921 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:33,922 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:33,922 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:33,983 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:34,152 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:34,192 | INFO     | all job control threads have been joined
[2025-10-12 08:12:25] 2025-10-12 12:11:34,401 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:34,548 | INFO     | [data] control thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:34,560 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:34,594 | INFO     | [payload] control thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:35,162 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:35,193 | INFO     | [job] control thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:35,211 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:35,265 | INFO     | [job] validate thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:35,276 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:35,855 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:12:25] 2025-10-12 12:11:39,861 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:11:43,665 | INFO     | job.realtimelogging is not enabled
[2025-10-12 08:12:25] 2025-10-12 12:11:44,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:12:25] 2025-10-12 12:12:02,620 | INFO     | PID=31781 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 08:12:25] 2025-10-12 12:12:02,620 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:12:25] 2025-10-12 12:12:02,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:12:25] 2025-10-12 12:12:02,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:12:25] 2025-10-12 12:12:18,567 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:12:25] 2025-10-12 12:12:20,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140151777843008)>', '<ExcThread(monitor, started 140151342749440)>']
[2025-10-12 08:12:25] 2025-10-12 12:12:20,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:12:25] 2025-10-12 12:12:20,697 | INFO     | [monitor] control thread has ended
[2025-10-12 08:12:25] 2025-10-12 12:12:25,316 | INFO     | all workflow threads have been joined
[2025-10-12 08:12:25] 2025-10-12 12:12:25,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:12:25] 2025-10-12 12:12:25,316 | INFO     | traces error code: 0
[2025-10-12 08:12:25] 2025-10-12 12:12:25,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:12:25] 2025-10-12 12:12:25,403 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:12:25] 2025-10-12 12:12:25,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:12:25] 2025-10-12 12:12:25,411 [wrapper] pilotpid: 31781
[2025-10-12 08:12:25] 2025-10-12 12:12:25,414 [wrapper] Pilot exit status: 0
[2025-10-12 08:12:25] 2025-10-12 12:12:25,431 [wrapper] pandaids: 6839590621
[2025-10-12 08:12:25] 2025-10-12 12:12:25,477 [wrapper] cleanup supervisor_pilot 17014 31782
[2025-10-12 08:12:25] 2025-10-12 12:12:25,481 [wrapper] Test setup, not cleaning
[2025-10-12 08:12:25] 2025-10-12 12:12:25,485 [wrapper] apfmon messages muted
[2025-10-12 08:12:25] 2025-10-12 12:12:25,489 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:12:25] 2025-10-12 12:12:25,492 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:12:25]  *** Error codes and diagnostics ***
[2025-10-12 08:12:25]     "exeErrorCode": 0,
[2025-10-12 08:12:25]     "exeErrorDiag": "",
[2025-10-12 08:12:25]     "pilotErrorCode": 0,
[2025-10-12 08:12:25]     "pilotErrorDiag": "",
[2025-10-12 08:12:25]  *** Listing of results directory ***
[2025-10-12 08:12:25] total 404328
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 01:26 pilot3.tar.gz
[2025-10-12 08:12:25] -rwx------ 1 boincer umatlas     36292 Oct 12 02:09 runpilot2-wrapper.sh
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:09 queuedata.json
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas       100 Oct 12 07:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:12:25] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 07:02 run_atlas
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas       105 Oct 12 07:02 job.xml
[2025-10-12 08:12:25] -rw-r--r-- 2 boincer umatlas 221984788 Oct 12 07:02 EVNT.46676267._004330.pool.root.1
[2025-10-12 08:12:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:02 start_atlas.sh
[2025-10-12 08:12:25] drwxrwx--x 2 boincer umatlas      4096 Oct 12 07:02 shared
[2025-10-12 08:12:25] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 07:02 input.tar.gz
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas         0 Oct 12 07:02 boinc_lockfile
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 07:02 pandaJob.out
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas    975520 Oct 12 07:03 agis_schedconf.cvmfs.json
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas   1560580 Oct 12 07:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:12:25] drwx------ 5 boincer umatlas      4096 Oct 12 07:03 pilot3
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas 186174152 Oct 12 08:10 HITS.46676269._072190.pool.root.1
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 08:11 init_data.xml
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas       529 Oct 12 08:11 boinc_task_state.xml
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas        95 Oct 12 08:11 pilot_heartbeat.json
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas      1051 Oct 12 08:11 memory_monitor_summary.json
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas    388250 Oct 12 08:11 log.46676269._072190.job.log.tgz.1
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas      7853 Oct 12 08:11 heartbeat.json
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 08:12 boinc_mmap_file
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas        27 Oct 12 08:12 wrapper_checkpoint.txt
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas      4818 Oct 12 08:12 pilotlog.txt
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas    598663 Oct 12 08:12 log.46676269._072190.job.log.1
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas       357 Oct 12 08:12 output.list
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas       620 Oct 12 08:12 runtime_log
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas   1003520 Oct 12 08:12 result.tar.gz
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas       659 Oct 12 08:12 ynVNDm4R4R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1JTMDmuTDXSn.diag
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 08:12 runtime_log.err
[2025-10-12 08:12:25] -rw-r--r-- 1 boincer umatlas     21636 Oct 12 08:12 stderr.txt
[2025-10-12 08:12:25] HITS file was successfully produced:
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas 186174152 Oct 12 08:10 shared/HITS.pool.root.1
[2025-10-12 08:12:25]  *** Contents of shared directory: ***
[2025-10-12 08:12:25] total 400156
[2025-10-12 08:12:25] -rw-r--r-- 2 boincer umatlas 221984788 Oct 12 07:02 ATLAS.root_0
[2025-10-12 08:12:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:02 start_atlas.sh
[2025-10-12 08:12:25] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 07:02 input.tar.gz
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas 186174152 Oct 12 08:10 HITS.pool.root.1
[2025-10-12 08:12:25] -rw------- 1 boincer umatlas   1003520 Oct 12 08:12 result.tar.gz
08:12:27 (28061): run_atlas exited; CPU time 44181.399636
08:12:27 (28061): called boinc_finish(0)

</stderr_txt>
]]>

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