Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
15:50:10 (1950661): wrapper (7.7.26015): starting
15:50:10 (1950661): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 15:50:10] Arguments: --nthreads 12
[2025-10-12 15:50:10] Threads: 12
[2025-10-12 15:50:10] Checking for CVMFS
[2025-10-12 15:50:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:50:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:50:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:50:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:50:10] 2.13.2.0 4637 1682 50488 151621 1 188 2994186 4096000 917 130560 0 5457077 99.997 60492 425 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 15:50:10] CVMFS is ok
[2025-10-12 15:50:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:50:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 15:50:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 15:50:10] Further information can be found at the LHC@home message board.
[2025-10-12 15:50:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:50:10] Checking for apptainer binary...
[2025-10-12 15:50:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:50:10] Running /usr/bin/apptainer --version
[2025-10-12 15:50:10] apptainer version 1.4.3
[2025-10-12 15:50:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:50:10] JM4
[2025-10-12 15:50:10] apptainer works
[2025-10-12 15:50:10] Set ATHENA_PROC_NUMBER=12
[2025-10-12 15:50:10] Set ATHENA_CORE_NUMBER=12
[2025-10-12 15:50:10] Starting ATLAS job with PandaID=6839588969
[2025-10-12 15:50:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:27:48]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:27:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 16:27:48]  replicas=None
[2025-10-12 16:27:48]  scope=mc23_13p6TeV
[2025-10-12 16:27:48]  status=None
[2025-10-12 16:27:48]  status_code=0
[2025-10-12 16:27:48]  storage_token=
[2025-10-12 16:27:48]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6839588969/log.46676269._072161.job.log.tgz.1
[2025-10-12 16:27:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/80/log.46676269._072161.job.log.tgz.1
[2025-10-12 16:27:48]  workdir=None
[2025-10-12 16:27:48] ]
[2025-10-12 16:27:48] 2025-10-12 14:27:11,143 | INFO     | transferring file log.46676269._072161.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6839588969/log.46676269._072161.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 16:27:48] 2025-10-12 14:27:11,143 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6839588969/log.46676269._072161.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-12 16:27:48] 2025-10-12 14:27:11,157 | INFO     | adding to output.list: log.46676269._072161.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/80/log.46676269._072161.job.log.tg
[2025-10-12 16:27:48] 2025-10-12 14:27:11,158 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 16:27:48] 2025-10-12 14:27:11,158 | INFO     | summary of transferred files:
[2025-10-12 16:27:48] 2025-10-12 14:27:11,158 | INFO     |  -- lfn=log.46676269._072161.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 16:27:48] 2025-10-12 14:27:11,158 | INFO     | stage-out finished correctly
[2025-10-12 16:27:48] 2025-10-12 14:27:12,648 | WARNING  | process 1961048 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 16:27:48] 2025-10-12 14:27:12,648 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6839588969/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:27:48] 2025-10-12 14:27:12,739 | INFO     | number of running child processes to parent process 1961048: 1
[2025-10-12 16:27:48] 2025-10-12 14:27:12,739 | INFO     | maximum number of monitored processes: 6
[2025-10-12 16:27:48] 2025-10-12 14:27:13,026 | INFO     | time since job start (2217s) is within the limit (172800.0s)
[2025-10-12 16:27:48] 2025-10-12 14:27:14,019 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 16:27:48] 2025-10-12 14:27:14,117 | INFO     | job 6839588969 has state=finished
[2025-10-12 16:27:48] 2025-10-12 14:27:14,117 | INFO     | preparing for final server update for job 6839588969 in state='finished'
[2025-10-12 16:27:48] 2025-10-12 14:27:14,118 | INFO     | this job has now completed (state=finished)
[2025-10-12 16:27:48] 2025-10-12 14:27:14,118 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 16:27:48] 2025-10-12 14:27:14,118 | INFO     | log transfer has been attempted: DONE
[2025-10-12 16:27:48] 2025-10-12 14:27:14,118 | INFO     | job 6839588969 has finished - writing final server update
[2025-10-12 16:27:48] 2025-10-12 14:27:14,118 | INFO     | total number of processed events: 400 (read)
[2025-10-12 16:27:48] 2025-10-12 14:27:14,119 | INFO     | executing command: lscpu
[2025-10-12 16:27:48] 2025-10-12 14:27:14,141 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 16:27:48] 2025-10-12 14:27:15,037 | INFO     | time since job start (2219s) is within the limit (172800.0s)
[2025-10-12 16:27:48] 2025-10-12 14:27:15,242 | INFO     | monitor loop #170: job 0:6839588969 is in state 'finished'
[2025-10-12 16:27:48] 2025-10-12 14:27:15,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:27:48] 2025-10-12 14:27:16,629 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 16:27:48] 2025-10-12 14:27:16,632 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3703.245583333334
[2025-10-12 16:27:48] 2025-10-12 14:27:16,635 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6839588969/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:27:48] 2025-10-12 14:27:16,635 | INFO     | extracted standard info from prmon json
[2025-10-12 16:27:48] 2025-10-12 14:27:16,635 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:27:48] 2025-10-12 14:27:16,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:27:48] 2025-10-12 14:27:16,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:27:48] 2025-10-12 14:27:16,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:27:48] 2025-10-12 14:27:16,636 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:27:48] 2025-10-12 14:27:16,636 | INFO     | sum of square deviations: 7553630.0
[2025-10-12 16:27:48] 2025-10-12 14:27:16,637 | INFO     | sum of deviations: -1225914377.0
[2025-10-12 16:27:48] 2025-10-12 14:27:16,637 | INFO     | mean x: 1760278196.0
[2025-10-12 16:27:48] 2025-10-12 14:27:16,637 | INFO     | mean y: 2763327.793103448
[2025-10-12 16:27:48] 2025-10-12 14:27:16,637 | INFO     | -- intersect: 285686646175.64557
[2025-10-12 16:27:48] 2025-10-12 14:27:16,637 | INFO     | intersect: 285686646175.64557
[2025-10-12 16:27:48] 2025-10-12 14:27:16,637 | INFO     | chi2: 0.01922445519171252
[2025-10-12 16:27:48] 2025-10-12 14:27:16,637 | INFO     | -- intersect: 285686646175.64557
[2025-10-12 16:27:48] 2025-10-12 14:27:16,637 | INFO     | current memory leak: -162.29 B/s (using 29 data points, chi2=0.02)
[2025-10-12 16:27:48] 2025-10-12 14:27:16,637 | INFO     | could have reported an average CPU frequency of 3831 MHz (5 samples)
[2025-10-12 16:27:48] 2025-10-12 14:27:16,637 | INFO     | ..............................
[2025-10-12 16:27:48] 2025-10-12 14:27:16,637 | INFO     | . Timing measurements:
[2025-10-12 16:27:48] 2025-10-12 14:27:16,638 | INFO     | . get job = 0 s
[2025-10-12 16:27:48] 2025-10-12 14:27:16,638 | INFO     | . initial setup = 1 s
[2025-10-12 16:27:48] 2025-10-12 14:27:16,638 | INFO     | . payload setup = 3 s
[2025-10-12 16:27:48] 2025-10-12 14:27:16,638 | INFO     | . stage-in = 0 s
[2025-10-12 16:27:48] 2025-10-12 14:27:16,638 | INFO     | . payload execution = 2193 s
[2025-10-12 16:27:48] 2025-10-12 14:27:16,638 | INFO     | . stage-out = 0 s
[2025-10-12 16:27:48] 2025-10-12 14:27:16,638 | INFO     | . log creation = 0 s
[2025-10-12 16:27:48] 2025-10-12 14:27:16,638 | INFO     | ..............................
[2025-10-12 16:27:48] 2025-10-12 14:27:16,700 | INFO     | 
[2025-10-12 16:27:48] 2025-10-12 14:27:16,700 | INFO     | job summary report
[2025-10-12 16:27:48] 2025-10-12 14:27:16,700 | INFO     | --------------------------------------------------
[2025-10-12 16:27:48] 2025-10-12 14:27:16,700 | INFO     | PanDA job id: 6839588969
[2025-10-12 16:27:48] 2025-10-12 14:27:16,700 | INFO     | task id: 46676269
[2025-10-12 16:27:48] 2025-10-12 14:27:16,700 | INFO     | errors: (none)
[2025-10-12 16:27:48] 2025-10-12 14:27:16,700 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:27:48] 2025-10-12 14:27:16,700 | INFO     | pilot state: finished 
[2025-10-12 16:27:48] 2025-10-12 14:27:16,700 | INFO     | transexitcode: 0
[2025-10-12 16:27:48] 2025-10-12 14:27:16,700 | INFO     | exeerrorcode: 0
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | exeerrordiag: 
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | exitcode: 0
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | exitmsg: OK
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | cpuconsumptiontime: 23813 s
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | nevents: 400
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | neventsw: 0
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | pid: 1961048
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | pgrp: 1961048
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | corecount: 12
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | event service: False
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | sizes: {0: 2348813, 3: 2349075, 11: 2349103, 2200: 2374237, 2201: 2383249, 2204: 2383305, 2206: 2383659}
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | --------------------------------------------------
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | 
[2025-10-12 16:27:48] 2025-10-12 14:27:16,701 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-12 16:27:48] 2025-10-12 14:27:16,716 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,716 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,716 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,716 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | job 6839588969 has completed (purged errors)
[2025-10-12 16:27:48] 2025-10-12 14:27:16,717 | INFO     | overall cleanup function is called
[2025-10-12 16:27:48] 2025-10-12 14:27:17,725 | INFO     | --- collectZombieJob: --- 10, [1961048]
[2025-10-12 16:27:48] 2025-10-12 14:27:17,726 | INFO     | zombie collector waiting for pid 1961048
[2025-10-12 16:27:48] 2025-10-12 14:27:17,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:27:48] 2025-10-12 14:27:17,726 | INFO     | collected zombie processes
[2025-10-12 16:27:48] 2025-10-12 14:27:17,726 | INFO     | will attempt to kill all subprocesses of pid=1961048
[2025-10-12 16:27:48] 2025-10-12 14:27:17,814 | INFO     | process IDs to be killed: [1961048] (in reverse order)
[2025-10-12 16:27:48] 2025-10-12 14:27:17,851 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:27:48] 2025-10-12 14:27:17,852 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:27:48] 2025-10-12 14:27:17,854 | INFO     | did not find any defunct processes belonging to 1961048
[2025-10-12 16:27:48] 2025-10-12 14:27:17,857 | INFO     | did not find any defunct processes belonging to 1961048
[2025-10-12 16:27:48] 2025-10-12 14:27:17,857 | INFO     | ready for new job
[2025-10-12 16:27:48] 2025-10-12 14:27:17,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:27:48] 2025-10-12 14:27:17,858 | INFO     | ***************************************
[2025-10-12 16:27:48] 2025-10-12 14:27:17,858 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:27:48] 2025-10-12 14:27:17,858 | INFO     | ***************************************
[2025-10-12 16:27:48] 2025-10-12 14:27:17,858 | INFO     | 
[2025-10-12 16:27:48] 2025-10-12 14:27:17,859 | INFO     | architecture information:
[2025-10-12 16:27:48] 2025-10-12 14:27:17,860 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:27:48] 2025-10-12 14:27:17,870 | INFO     | cat /etc/os-release:
[2025-10-12 16:27:48] NAME="CentOS Linux"
[2025-10-12 16:27:48] VERSION="7 (Core)"
[2025-10-12 16:27:48] ID="centos"
[2025-10-12 16:27:48] ID_LIKE="rhel fedora"
[2025-10-12 16:27:48] VERSION_ID="7"
[2025-10-12 16:27:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:27:48] ANSI_COLOR="0;31"
[2025-10-12 16:27:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:27:48] HOME_URL="https://www.centos.org/"
[2025-10-12 16:27:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:27:48] 
[2025-10-12 16:27:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:27:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:27:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:27:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:27:48] 
[2025-10-12 16:27:48] 2025-10-12 14:27:17,870 | INFO     | ***************************************
[2025-10-12 16:27:48] 2025-10-12 14:27:18,373 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-12 16:27:48] 2025-10-12 14:27:18,386 | INFO     | sufficient remaining disk space (72037171200 B)
[2025-10-12 16:27:48] 2025-10-12 14:27:18,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:27:48] 2025-10-12 14:27:18,386 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:27:48] 2025-10-12 14:27:18,387 | INFO     | update_server=False
[2025-10-12 16:27:48] 2025-10-12 14:27:18,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:27:48] 2025-10-12 14:27:18,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:27:48] 2025-10-12 14:27:18,461 | INFO     | all payload control threads have been joined
[2025-10-12 16:27:48] 2025-10-12 14:27:18,750 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:27:48] 2025-10-12 14:27:18,750 | INFO     | aborting loop
[2025-10-12 16:27:48] 2025-10-12 14:27:19,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:27:48] 2025-10-12 14:27:19,243 | INFO     | all data control threads have been joined
[2025-10-12 16:27:48] 2025-10-12 14:27:19,392 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:19,392 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:19,466 | INFO     | [payload] control thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:19,707 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:19,755 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:19,801 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:19,802 | INFO     | [job] validate thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:19,842 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:27:48] 2025-10-12 14:27:19,945 | INFO     | all job control threads have been joined
[2025-10-12 16:27:48] 2025-10-12 14:27:19,981 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:20,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:27:48] 2025-10-12 14:27:20,135 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:20,235 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:20,249 | INFO     | [data] control thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:20,762 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:20,951 | INFO     | [job] control thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:21,239 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:24,086 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:29,031 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:27:48] 2025-10-12 14:27:30,036 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:27:48] 2025-10-12 14:27:30,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132045536044864)>', '<ExcThread(monitor, started 132045028169472)>']
[2025-10-12 16:27:48] 2025-10-12 14:27:35,216 | INFO     | all workflow threads have been joined
[2025-10-12 16:27:48] 2025-10-12 14:27:35,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:27:48] 2025-10-12 14:27:35,216 | INFO     | traces error code: 0
[2025-10-12 16:27:48] 2025-10-12 14:27:35,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:27:48] 2025-10-12 14:27:48,206 | INFO     | PID=1954478 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:27:48] 2025-10-12 14:27:48,207 | INFO     | .. there are 2 such processes running
[2025-10-12 16:27:48] 2025-10-12 14:27:48,207 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:27:48] 2025-10-12 14:27:48,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:27:48] 2025-10-12 14:27:48,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:27:48] 2025-10-12 14:27:48,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:27:48] 2025-10-12 14:27:48,207 | INFO     | [monitor] control thread has ended
[2025-10-12 16:27:48] 2025-10-12 14:27:48,278 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:27:48] 2025-10-12 14:27:48,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:27:48] 2025-10-12 14:27:48,282 [wrapper] pilotpid: 1954478
[2025-10-12 16:27:48] 2025-10-12 14:27:48,284 [wrapper] Pilot exit status: 0
[2025-10-12 16:27:48] 2025-10-12 14:27:48,291 [wrapper] pandaids: 6839588969
[2025-10-12 16:27:48] 2025-10-12 14:27:48,318 [wrapper] cleanup supervisor_pilot 1987207 1954479
[2025-10-12 16:27:48] 2025-10-12 14:27:48,320 [wrapper] Test setup, not cleaning
[2025-10-12 16:27:48] 2025-10-12 14:27:48,322 [wrapper] apfmon messages muted
[2025-10-12 16:27:48] 2025-10-12 14:27:48,324 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:27:48] 2025-10-12 14:27:48,326 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:27:48]  *** Error codes and diagnostics ***
[2025-10-12 16:27:48]     "exeErrorCode": 0,
[2025-10-12 16:27:48]     "exeErrorDiag": "",
[2025-10-12 16:27:48]     "pilotErrorCode": 0,
[2025-10-12 16:27:48]     "pilotErrorDiag": "",
[2025-10-12 16:27:48]  *** Listing of results directory ***
[2025-10-12 16:27:48] total 416168
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc    557409 oct 12 07:26 pilot3.tar.gz
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc      5112 oct 12 08:03 queuedata.json
[2025-10-12 16:27:48] -rwx------ 1 boinc boinc     36292 oct 12 08:04 runpilot2-wrapper.sh
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc       100 oct 12 15:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:27:48] -rwxr-xr-x 1 boinc boinc      7986 oct 12 15:50 run_atlas
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc       105 oct 12 15:50 job.xml
[2025-10-12 16:27:48] -rw-r--r-- 2 boinc boinc     15120 oct 12 15:50 start_atlas.sh
[2025-10-12 16:27:48] drwxrwx--x 1 boinc boinc        76 oct 12 15:50 shared
[2025-10-12 16:27:48] -rw-r--r-- 2 boinc boinc    569679 oct 12 15:50 input.tar.gz
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc      9255 oct 12 15:50 init_data.xml
[2025-10-12 16:27:48] -rw-r--r-- 2 boinc boinc 218514428 oct 12 15:50 EVNT.46676267._004329.pool.root.1
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc         0 oct 12 15:50 boinc_setup_complete
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc         0 oct 12 15:50 boinc_lockfile
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc      2549 oct 12 15:50 pandaJob.out
[2025-10-12 16:27:48] -rw------- 1 boinc boinc    975528 oct 12 15:50 agis_schedconf.cvmfs.json
[2025-10-12 16:27:48] -rw------- 1 boinc boinc   1560580 oct 12 15:50 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:27:48] drwx------ 1 boinc boinc       414 oct 12 15:50 pilot3
[2025-10-12 16:27:48] -rw------- 1 boinc boinc 202317563 oct 12 16:26 HITS.46676269._072161.pool.root.1
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc       530 oct 12 16:26 boinc_task_state.xml
[2025-10-12 16:27:48] -rw------- 1 boinc boinc      1016 oct 12 16:27 memory_monitor_summary.json
[2025-10-12 16:27:48] -rw------- 1 boinc boinc    359069 oct 12 16:27 log.46676269._072161.job.log.tgz.1
[2025-10-12 16:27:48] -rw------- 1 boinc boinc      7732 oct 12 16:27 heartbeat.json
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc        27 oct 12 16:27 wrapper_checkpoint.txt
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc      8192 oct 12 16:27 boinc_mmap_file
[2025-10-12 16:27:48] -rw------- 1 boinc boinc       822 oct 12 16:27 pilotlog.txt
[2025-10-12 16:27:48] -rw------- 1 boinc boinc        95 oct 12 16:27 pilot_heartbeat.json
[2025-10-12 16:27:48] -rw------- 1 boinc boinc    361536 oct 12 16:27 log.46676269._072161.job.log.1
[2025-10-12 16:27:48] -rw------- 1 boinc boinc       357 oct 12 16:27 output.list
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc       620 oct 12 16:27 runtime_log
[2025-10-12 16:27:48] -rw------- 1 boinc boinc    737280 oct 12 16:27 result.tar.gz
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc      8731 oct 12 16:27 runtime_log.err
[2025-10-12 16:27:48] -rw------- 1 boinc boinc       637 oct 12 16:27 JxULDm1M4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdmiNDm6OaLsm.diag
[2025-10-12 16:27:48] -rw-r--r-- 1 boinc boinc     21939 oct 12 16:27 stderr.txt
[2025-10-12 16:27:48] HITS file was successfully produced:
[2025-10-12 16:27:48] -rw------- 1 boinc boinc 202317563 oct 12 16:26 shared/HITS.pool.root.1
[2025-10-12 16:27:48]  *** Contents of shared directory: ***
[2025-10-12 16:27:48] total 412268
[2025-10-12 16:27:48] -rw-r--r-- 2 boinc boinc     15120 oct 12 15:50 start_atlas.sh
[2025-10-12 16:27:48] -rw-r--r-- 2 boinc boinc    569679 oct 12 15:50 input.tar.gz
[2025-10-12 16:27:48] -rw-r--r-- 2 boinc boinc 218514428 oct 12 15:50 ATLAS.root_0
[2025-10-12 16:27:48] -rw------- 1 boinc boinc 202317563 oct 12 16:26 HITS.pool.root.1
[2025-10-12 16:27:48] -rw------- 1 boinc boinc    737280 oct 12 16:27 result.tar.gz
16:27:49 (1950661): run_atlas exited; CPU time 23816.505294
16:27:49 (1950661): called boinc_finish(0)

</stderr_txt>
]]>

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