Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:59:56 (5384): wrapper (7.7.26015): starting
06:59:56 (5384): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 06:59:56] Arguments: --nthreads 8
[2025-10-12 06:59:56] Threads: 8
[2025-10-12 06:59:56] Checking for CVMFS
[2025-10-12 06:59:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:59:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:59:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:59:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:59:56] 2.11.2.0 2885 205695 77004 151617 2 59 12116065 20275201 1 130560 1 73529940 99.977 10508104 9969 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 06:59:56] CVMFS is ok
[2025-10-12 06:59:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:59:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:59:56] Further information can be found at the LHC@home message board.
[2025-10-12 06:59:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:59:56] Checking for apptainer binary...
[2025-10-12 06:59:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:59:56] Running /usr/bin/apptainer --version
[2025-10-12 06:59:56] apptainer version 1.3.2-1.el7
[2025-10-12 06:59:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:59:58] c-204-6.aglt2.org
[2025-10-12 06:59:58] apptainer works
[2025-10-12 06:59:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 06:59:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 06:59:58] Starting ATLAS job with PandaID=6839591032
[2025-10-12 06:59:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:12:38 (13478): wrapper (7.7.26015): starting
09:12:38 (13478): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:12:38] Arguments: --nthreads 8
[2025-10-12 09:12:38] Threads: 8
[2025-10-12 09:12:38] This job has been restarted, cleaning up previous attempt
[2025-10-12 09:12:38] Checking for CVMFS
[2025-10-12 09:12:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:12:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:12:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:12:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:12:39] 2.11.2.0 2885 205828 76696 151620 1 59 12254135 20275201 1 130560 1 73613512 99.978 10512080 9971 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:12:39] CVMFS is ok
[2025-10-12 09:12:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:12:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:12:39] Further information can be found at the LHC@home message board.
[2025-10-12 09:12:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:12:39] Checking for apptainer binary...
[2025-10-12 09:12:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:12:39] Running /usr/bin/apptainer --version
[2025-10-12 09:12:39] apptainer version 1.3.2-1.el7
[2025-10-12 09:12:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:12:40] c-204-6.aglt2.org
[2025-10-12 09:12:40] apptainer works
[2025-10-12 09:12:40] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:12:40] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:12:40] Starting ATLAS job with PandaID=6839591032
[2025-10-12 09:12:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:12:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:12:15] 2025-10-12 15:11:44,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:12:15] 2025-10-12 15:11:44,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:12:15] 2025-10-12 15:11:44,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:12:15] 2025-10-12 15:11:44,086 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:12:15] 2025-10-12 15:11:44,086 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,087 | INFO     | sum of deviations: 6067536776.000003
[2025-10-12 11:12:15] 2025-10-12 15:11:44,087 | INFO     | mean x: 1760278346.0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,087 | INFO     | mean y: 2469344.8205128205
[2025-10-12 11:12:15] 2025-10-12 15:11:44,087 | INFO     | -- intersect: -21505008371.96254
[2025-10-12 11:12:15] 2025-10-12 15:11:44,087 | INFO     | intersect: -21505008371.96254
[2025-10-12 11:12:15] 2025-10-12 15:11:44,087 | INFO     | chi2: 2.4230048277636334
[2025-10-12 11:12:15] 2025-10-12 15:11:44,088 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,088 | INFO     | sum of deviations: 13594465947.5
[2025-10-12 11:12:15] 2025-10-12 15:11:44,088 | INFO     | mean x: 1760278193.5
[2025-10-12 11:12:15] 2025-10-12 15:11:44,088 | INFO     | mean y: 2487502.098214286
[2025-10-12 11:12:15] 2025-10-12 15:11:44,089 | INFO     | -- intersect: -54932065013.90256
[2025-10-12 11:12:15] 2025-10-12 15:11:44,089 | INFO     | intersect: -54932065013.90256
[2025-10-12 11:12:15] 2025-10-12 15:11:44,089 | INFO     | chi2: 1.6587820845343662
[2025-10-12 11:12:15] 2025-10-12 15:11:44,089 | INFO     | current chi2=1.6587820845343662 (change=31.540289745713125 %)
[2025-10-12 11:12:15] 2025-10-12 15:11:44,089 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,090 | INFO     | sum of deviations: 13295564697.0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,090 | INFO     | mean x: 1760278041.0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,090 | INFO     | mean y: 2486684.3457943927
[2025-10-12 11:12:15] 2025-10-12 15:11:44,090 | INFO     | -- intersect: -61613901387.54799
[2025-10-12 11:12:15] 2025-10-12 15:11:44,090 | INFO     | intersect: -61613901387.54799
[2025-10-12 11:12:15] 2025-10-12 15:11:44,091 | INFO     | chi2: 1.6609687956152122
[2025-10-12 11:12:15] 2025-10-12 15:11:44,091 | INFO     | current chi2=1.6609687956152122 (change=-0.13182630203411153 %)
[2025-10-12 11:12:15] 2025-10-12 15:11:44,091 | INFO     | right removable region: 106
[2025-10-12 11:12:15] 2025-10-12 15:11:44,091 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,092 | INFO     | sum of deviations: -13302871276.999998
[2025-10-12 11:12:15] 2025-10-12 15:11:44,092 | INFO     | mean x: 1760278498.5
[2025-10-12 11:12:15] 2025-10-12 15:11:44,092 | INFO     | mean y: 2516978.910714286
[2025-10-12 11:12:15] 2025-10-12 15:11:44,092 | INFO     | -- intersect: 53758759425.23093
[2025-10-12 11:12:15] 2025-10-12 15:11:44,092 | INFO     | intersect: 53758759425.23093
[2025-10-12 11:12:15] 2025-10-12 15:11:44,092 | INFO     | chi2: 0.8556108532767951
[2025-10-12 11:12:15] 2025-10-12 15:11:44,093 | INFO     | current chi2=0.8556108532767951 (change=64.68802523738675 %)
[2025-10-12 11:12:15] 2025-10-12 15:11:44,093 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,093 | INFO     | sum of deviations: -15086124476.0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,093 | INFO     | mean x: 1760278651.0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,094 | INFO     | mean y: 2521698.542056075
[2025-10-12 11:12:15] 2025-10-12 15:11:44,094 | INFO     | -- intersect: 69917026536.94221
[2025-10-12 11:12:15] 2025-10-12 15:11:44,094 | INFO     | intersect: 69917026536.94221
[2025-10-12 11:12:15] 2025-10-12 15:11:44,094 | INFO     | chi2: 0.8148821527216914
[2025-10-12 11:12:15] 2025-10-12 15:11:44,094 | INFO     | current chi2=0.8148821527216914 (change=4.760189798799539 %)
[2025-10-12 11:12:15] 2025-10-12 15:11:44,094 | INFO     | left removable region: 20
[2025-10-12 11:12:15] 2025-10-12 15:11:44,094 | INFO     | sum of square deviations: 197203697.5
[2025-10-12 11:12:15] 2025-10-12 15:11:44,095 | INFO     | sum of deviations: -5518459641.500001
[2025-10-12 11:12:15] 2025-10-12 15:11:44,095 | INFO     | mean x: 1760278620.5
[2025-10-12 11:12:15] 2025-10-12 15:11:44,095 | INFO     | mean y: 2542312.3139534886
[2025-10-12 11:12:15] 2025-10-12 15:11:44,095 | INFO     | -- intersect: 49261388105.63153
[2025-10-12 11:12:15] 2025-10-12 15:11:44,095 | INFO     | intersect: 49261388105.63153
[2025-10-12 11:12:15] 2025-10-12 15:11:44,096 | INFO     | chi2: 0.012327554624022534
[2025-10-12 11:12:15] 2025-10-12 15:11:44,096 | INFO     | -- intersect: 49261388105.63153
[2025-10-12 11:12:15] 2025-10-12 15:11:44,096 | INFO     | current memory leak: -27.98 B/s (using 86 data points, chi2=0.01)
[2025-10-12 11:12:15] 2025-10-12 15:11:44,096 | INFO     | could have reported an average CPU frequency of 1950 MHz (7 samples)
[2025-10-12 11:12:15] 2025-10-12 15:11:44,096 | INFO     | ..............................
[2025-10-12 11:12:15] 2025-10-12 15:11:44,097 | INFO     | . Timing measurements:
[2025-10-12 11:12:15] 2025-10-12 15:11:44,097 | INFO     | . get job = 0 s
[2025-10-12 11:12:15] 2025-10-12 15:11:44,097 | INFO     | . initial setup = 1 s
[2025-10-12 11:12:15] 2025-10-12 15:11:44,097 | INFO     | . payload setup = 8 s
[2025-10-12 11:12:15] 2025-10-12 15:11:44,097 | INFO     | . stage-in = 0 s
[2025-10-12 11:12:15] 2025-10-12 15:11:44,097 | INFO     | . payload execution = 7087 s
[2025-10-12 11:12:15] 2025-10-12 15:11:44,097 | INFO     | . stage-out = 2 s
[2025-10-12 11:12:15] 2025-10-12 15:11:44,097 | INFO     | . log creation = 0 s
[2025-10-12 11:12:15] 2025-10-12 15:11:44,097 | INFO     | ..............................
[2025-10-12 11:12:15] 2025-10-12 15:11:44,311 | INFO     | 
[2025-10-12 11:12:15] 2025-10-12 15:11:44,312 | INFO     | job summary report
[2025-10-12 11:12:15] 2025-10-12 15:11:44,312 | INFO     | --------------------------------------------------
[2025-10-12 11:12:15] 2025-10-12 15:11:44,312 | INFO     | PanDA job id: 6839591032
[2025-10-12 11:12:15] 2025-10-12 15:11:44,312 | INFO     | task id: 46676269
[2025-10-12 11:12:15] 2025-10-12 15:11:44,312 | INFO     | errors: (none)
[2025-10-12 11:12:15] 2025-10-12 15:11:44,313 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:12:15] 2025-10-12 15:11:44,313 | INFO     | pilot state: finished 
[2025-10-12 11:12:15] 2025-10-12 15:11:44,313 | INFO     | transexitcode: 0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,313 | INFO     | exeerrorcode: 0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,313 | INFO     | exeerrordiag: 
[2025-10-12 11:12:15] 2025-10-12 15:11:44,314 | INFO     | exitcode: 0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,314 | INFO     | exitmsg: OK
[2025-10-12 11:12:15] 2025-10-12 15:11:44,314 | INFO     | cpuconsumptiontime: 52476 s
[2025-10-12 11:12:15] 2025-10-12 15:11:44,314 | INFO     | nevents: 400
[2025-10-12 11:12:15] 2025-10-12 15:11:44,314 | INFO     | neventsw: 0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,315 | INFO     | pid: 25521
[2025-10-12 11:12:15] 2025-10-12 15:11:44,315 | INFO     | pgrp: 25521
[2025-10-12 11:12:15] 2025-10-12 15:11:44,315 | INFO     | corecount: 8
[2025-10-12 11:12:15] 2025-10-12 15:11:44,315 | INFO     | event service: False
[2025-10-12 11:12:15] 2025-10-12 15:11:44,315 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7099: 2376400, 7101: 2385398, 7102: 2385454, 7110: 2385776}
[2025-10-12 11:12:15] 2025-10-12 15:11:44,315 | INFO     | --------------------------------------------------
[2025-10-12 11:12:15] 2025-10-12 15:11:44,316 | INFO     | 
[2025-10-12 11:12:15] 2025-10-12 15:11:44,316 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 11:12:15] 2025-10-12 15:11:44,343 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,343 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:12:15] 2025-10-12 15:11:44,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:12:15] 2025-10-12 15:11:44,347 | INFO     | job 6839591032 has completed (purged errors)
[2025-10-12 11:12:15] 2025-10-12 15:11:44,347 | INFO     | overall cleanup function is called
[2025-10-12 11:12:15] 2025-10-12 15:11:45,356 | INFO     | --- collectZombieJob: --- 10, [25521]
[2025-10-12 11:12:15] 2025-10-12 15:11:45,356 | INFO     | zombie collector waiting for pid 25521
[2025-10-12 11:12:15] 2025-10-12 15:11:45,356 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:12:15] 2025-10-12 15:11:45,356 | INFO     | collected zombie processes
[2025-10-12 11:12:15] 2025-10-12 15:11:45,356 | INFO     | will attempt to kill all subprocesses of pid=25521
[2025-10-12 11:12:15] 2025-10-12 15:11:45,448 | INFO     | process IDs to be killed: [25521] (in reverse order)
[2025-10-12 11:12:15] 2025-10-12 15:11:45,508 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:12:15] 2025-10-12 15:11:45,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:12:15] 2025-10-12 15:11:45,513 | INFO     | did not find any defunct processes belonging to 25521
[2025-10-12 11:12:15] 2025-10-12 15:11:45,515 | INFO     | did not find any defunct processes belonging to 25521
[2025-10-12 11:12:15] 2025-10-12 15:11:45,516 | INFO     | ready for new job
[2025-10-12 11:12:15] 2025-10-12 15:11:45,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:12:15] 2025-10-12 15:11:45,517 | INFO     | ***************************************
[2025-10-12 11:12:15] 2025-10-12 15:11:45,517 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:12:15] 2025-10-12 15:11:45,518 | INFO     | ***************************************
[2025-10-12 11:12:15] 2025-10-12 15:11:45,518 | INFO     | 
[2025-10-12 11:12:15] 2025-10-12 15:11:45,518 | INFO     | architecture information:
[2025-10-12 11:12:15] 2025-10-12 15:11:45,519 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:12:15] 2025-10-12 15:11:45,539 | INFO     | cat /etc/os-release:
[2025-10-12 11:12:15] NAME="CentOS Linux"
[2025-10-12 11:12:15] VERSION="7 (Core)"
[2025-10-12 11:12:15] ID="centos"
[2025-10-12 11:12:15] ID_LIKE="rhel fedora"
[2025-10-12 11:12:15] VERSION_ID="7"
[2025-10-12 11:12:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:12:15] ANSI_COLOR="0;31"
[2025-10-12 11:12:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:12:15] HOME_URL="https://www.centos.org/"
[2025-10-12 11:12:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:12:15] 
[2025-10-12 11:12:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:12:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:12:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:12:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:12:15] 
[2025-10-12 11:12:15] 2025-10-12 15:11:45,540 | INFO     | ***************************************
[2025-10-12 11:12:15] 2025-10-12 15:11:46,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 11:12:15] 2025-10-12 15:11:46,063 | INFO     | sufficient remaining disk space (18596495360 B)
[2025-10-12 11:12:15] 2025-10-12 15:11:46,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:12:15] 2025-10-12 15:11:46,064 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:12:15] 2025-10-12 15:11:46,064 | INFO     | update_server=False
[2025-10-12 11:12:15] 2025-10-12 15:11:46,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:12:15] 2025-10-12 15:11:46,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:12:15] 2025-10-12 15:11:46,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:12:15] 2025-10-12 15:11:46,367 | INFO     | all data control threads have been joined
[2025-10-12 11:12:15] 2025-10-12 15:11:46,523 | INFO     | all payload control threads have been joined
[2025-10-12 11:12:15] 2025-10-12 15:11:46,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:12:15] 2025-10-12 15:11:46,843 | INFO     | aborting loop
[2025-10-12 11:12:15] 2025-10-12 15:11:46,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:12:15] 2025-10-12 15:11:46,871 | INFO     | all job control threads have been joined
[2025-10-12 11:12:15] 2025-10-12 15:11:47,070 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:47,071 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:47,074 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:47,233 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:47,337 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:47,338 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:47,358 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:47,369 | INFO     | [data] control thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:47,529 | INFO     | [payload] control thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:47,849 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:47,877 | INFO     | [job] control thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:48,071 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:48,089 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:48,412 | INFO     | [job] validate thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:50,861 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:11:56,521 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:12:15] 2025-10-12 15:11:57,526 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:12:15] 2025-10-12 15:12:07,389 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:12:15] 2025-10-12 15:12:08,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700471363392)>', '<ExcThread(monitor, started 139699289048832)>']
[2025-10-12 11:12:15] 2025-10-12 15:12:13,802 | INFO     | all workflow threads have been joined
[2025-10-12 11:12:15] 2025-10-12 15:12:13,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:12:15] 2025-10-12 15:12:13,803 | INFO     | traces error code: 0
[2025-10-12 11:12:15] 2025-10-12 15:12:13,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:12:15] 2025-10-12 15:12:15,614 | INFO     | PID=18320 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:12:15] 2025-10-12 15:12:15,614 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:12:15] 2025-10-12 15:12:15,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:12:15] 2025-10-12 15:12:15,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:12:15] 2025-10-12 15:12:15,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:12:15] 2025-10-12 15:12:15,615 | INFO     | [monitor] control thread has ended
[2025-10-12 11:12:15] 2025-10-12 15:12:15,735 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:12:15] 2025-10-12 15:12:15,740 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:12:15] 2025-10-12 15:12:15,745 [wrapper] pilotpid: 18320
[2025-10-12 11:12:15] 2025-10-12 15:12:15,750 [wrapper] Pilot exit status: 0
[2025-10-12 11:12:15] 2025-10-12 15:12:15,770 [wrapper] pandaids: 6839591032 6839591032
[2025-10-12 11:12:15] 2025-10-12 15:12:15,815 [wrapper] cleanup supervisor_pilot  2276 18321
[2025-10-12 11:12:15] 2025-10-12 15:12:15,820 [wrapper] Test setup, not cleaning
[2025-10-12 11:12:15] 2025-10-12 15:12:15,826 [wrapper] apfmon messages muted
[2025-10-12 11:12:15] 2025-10-12 15:12:15,830 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:12:15] 2025-10-12 15:12:15,835 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:12:15]  *** Error codes and diagnostics ***
[2025-10-12 11:12:15]     "exeErrorCode": 0,
[2025-10-12 11:12:15]     "exeErrorDiag": "",
[2025-10-12 11:12:15]     "pilotErrorCode": 0,
[2025-10-12 11:12:15]     "pilotErrorDiag": "",
[2025-10-12 11:12:15]  *** Listing of results directory ***
[2025-10-12 11:12:15] total 619568
[2025-10-12 11:12:15] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:14 pilot3.tar.gz
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:23 queuedata.json
[2025-10-12 11:12:15] -rwx------ 1 boincer umatlas     36292 Oct 12 02:24 runpilot2-wrapper.sh
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas       100 Oct 12 06:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:12:15] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 06:59 run_atlas
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas       105 Oct 12 06:59 job.xml
[2025-10-12 11:12:15] -rw-r--r-- 3 boincer umatlas 219654292 Oct 12 06:59 EVNT.46676267._004347.pool.root.1
[2025-10-12 11:12:15] -rw-r--r-- 3 boincer umatlas 219654292 Oct 12 06:59 ATLAS.root_0
[2025-10-12 11:12:15] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:59 start_atlas.sh
[2025-10-12 11:12:15] drwxrwx--x 2 boincer umatlas      4096 Oct 12 06:59 shared
[2025-10-12 11:12:15] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 06:59 input.tar.gz
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas         0 Oct 12 06:59 boinc_lockfile
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 09:12 pandaJob.out
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas    975512 Oct 12 09:12 agis_schedconf.cvmfs.json
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas      5911 Oct 12 11:04 init_data.xml
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas 188482188 Oct 12 11:10 HITS.46676269._072464.pool.root.1
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas       533 Oct 12 11:11 boinc_task_state.xml
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas      1049 Oct 12 11:11 memory_monitor_summary.json
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas   1560580 Oct 12 11:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas    370191 Oct 12 11:11 log.46676269._072464.job.log.tgz.1
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas        96 Oct 12 11:11 pilot_heartbeat.json
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas      7847 Oct 12 11:11 heartbeat.json
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 11:12 boinc_mmap_file
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas       745 Oct 12 11:12 pilotlog.txt
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas   1003403 Oct 12 11:12 log.46676269._072464.job.log.1
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas       357 Oct 12 11:12 output.list
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas       620 Oct 12 11:12 runtime_log
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas   1392640 Oct 12 11:12 result.tar.gz
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas      8783 Oct 12 11:12 runtime_log.err
[2025-10-12 11:12:15] -rw------- 1 boincer umatlas       783 Oct 12 11:12 kJ5NDm6f4R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4LTMDmnoZQkm.diag
[2025-10-12 11:12:15] -rw-r--r-- 1 boincer umatlas        29 Oct 12 11:12 wrapper_checkpoint.txt
[2025-10-12 11:12:16] -rw-r--r-- 1 boincer umatlas     22988 Oct 12 11:12 stderr.txt
[2025-10-12 11:12:16] HITS file was successfully produced:
[2025-10-12 11:12:16] -rw------- 1 boincer umatlas 188482188 Oct 12 11:10 shared/HITS.pool.root.1
[2025-10-12 11:12:16]  *** Contents of shared directory: ***
[2025-10-12 11:12:16] total 400516
[2025-10-12 11:12:16] -rw-r--r-- 3 boincer umatlas 219654292 Oct 12 06:59 ATLAS.root_0
[2025-10-12 11:12:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:59 start_atlas.sh
[2025-10-12 11:12:16] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 06:59 input.tar.gz
[2025-10-12 11:12:16] -rw------- 1 boincer umatlas 188482188 Oct 12 11:10 HITS.pool.root.1
[2025-10-12 11:12:16] -rw------- 1 boincer umatlas   1392640 Oct 12 11:12 result.tar.gz
11:12:17 (13478): run_atlas exited; CPU time 52433.310750
11:12:17 (13478): called boinc_finish(0)

</stderr_txt>
]]>

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