Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:29:10 (5993): wrapper (7.7.26015): starting
16:29:10 (5993): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:29:10] Arguments: --nthreads 8
[2025-10-12 16:29:10] Threads: 8
[2025-10-12 16:29:10] Checking for CVMFS
[2025-10-12 16:29:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:29:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:29:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:29:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:29:13] 2.11.2.0 1016 107496 113840 151623 0 155 13966886 25165825 4632 130560 0 34112228 99.905 14783916 2607 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 16:29:13] CVMFS is ok
[2025-10-12 16:29:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:29:13] Checking for apptainer binary...
[2025-10-12 16:29:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:29:13] Running /usr/bin/apptainer --version
[2025-10-12 16:29:13] apptainer version 1.3.2-1.el7
[2025-10-12 16:29:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:29:37] cg-vwn383.simple-grid.lan
[2025-10-12 16:29:37] apptainer works
[2025-10-12 16:29:37] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:29:37] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:29:37] Starting ATLAS job with PandaID=6839316674
[2025-10-12 16:29:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:40:55]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:40:55] 2025-10-12 18:39:40,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:40:55] 2025-10-12 18:39:40,352 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:40:55] 2025-10-12 18:39:40,353 | INFO     | sum of square deviations: 3922276332.0
[2025-10-12 20:40:55] 2025-10-12 18:39:40,355 | INFO     | sum of deviations: 58074888898.999985
[2025-10-12 20:40:55] 2025-10-12 18:39:40,355 | INFO     | mean x: 1760287162.0
[2025-10-12 20:40:55] 2025-10-12 18:39:40,355 | INFO     | mean y: 2451341.493562232
[2025-10-12 20:40:55] 2025-10-12 18:39:40,355 | INFO     | -- intersect: -26061107854.84661
[2025-10-12 20:40:55] 2025-10-12 18:39:40,355 | INFO     | intersect: -26061107854.84661
[2025-10-12 20:40:55] 2025-10-12 18:39:40,356 | INFO     | chi2: 5.121788015129401
[2025-10-12 20:40:55] 2025-10-12 18:39:40,356 | INFO     | sum of square deviations: 3675146117.0
[2025-10-12 20:40:55] 2025-10-12 18:39:40,365 | INFO     | sum of deviations: 71992400689.99998
[2025-10-12 20:40:55] 2025-10-12 18:39:40,365 | INFO     | mean x: 1760287009.5
[2025-10-12 20:40:55] 2025-10-12 18:39:40,365 | INFO     | mean y: 2459764.4122807016
[2025-10-12 20:40:55] 2025-10-12 18:39:40,366 | INFO     | -- intersect: -34479784936.316124
[2025-10-12 20:40:55] 2025-10-12 18:39:40,366 | INFO     | intersect: -34479784936.316124
[2025-10-12 20:40:55] 2025-10-12 18:39:40,366 | INFO     | chi2: 4.391921684335759
[2025-10-12 20:40:55] 2025-10-12 18:39:40,366 | INFO     | current chi2=4.391921684335759 (change=14.250225285343104 %)
[2025-10-12 20:40:55] 2025-10-12 18:39:40,366 | INFO     | right removable region: 227
[2025-10-12 20:40:55] 2025-10-12 18:39:40,367 | INFO     | sum of square deviations: 3675146117.0
[2025-10-12 20:40:55] 2025-10-12 18:39:40,368 | INFO     | sum of deviations: -14809827873.499998
[2025-10-12 20:40:55] 2025-10-12 18:39:40,369 | INFO     | mean x: 1760287314.5
[2025-10-12 20:40:55] 2025-10-12 18:39:40,369 | INFO     | mean y: 2496231.951754386
[2025-10-12 20:40:55] 2025-10-12 18:39:40,369 | INFO     | -- intersect: 7095969880.539904
[2025-10-12 20:40:55] 2025-10-12 18:39:40,369 | INFO     | intersect: 7095969880.539904
[2025-10-12 20:40:55] 2025-10-12 18:39:40,369 | INFO     | chi2: 1.267947456085124
[2025-10-12 20:40:55] 2025-10-12 18:39:40,369 | INFO     | current chi2=1.267947456085124 (change=75.24404656460408 %)
[2025-10-12 20:40:55] 2025-10-12 18:39:40,370 | INFO     | sum of square deviations: 3438620752.0
[2025-10-12 20:40:55] 2025-10-12 18:39:40,372 | INFO     | sum of deviations: -30871684102.00007
[2025-10-12 20:40:55] 2025-10-12 18:39:40,372 | INFO     | mean x: 1760287467.0
[2025-10-12 20:40:55] 2025-10-12 18:39:40,372 | INFO     | mean y: 2506476.869955157
[2025-10-12 20:40:55] 2025-10-12 18:39:40,372 | INFO     | -- intersect: 15806237835.824387
[2025-10-12 20:40:55] 2025-10-12 18:39:40,372 | INFO     | intersect: 15806237835.824387
[2025-10-12 20:40:55] 2025-10-12 18:39:40,373 | INFO     | chi2: 0.9198246291271075
[2025-10-12 20:40:55] 2025-10-12 18:39:40,373 | INFO     | current chi2=0.9198246291271075 (change=27.455619338743738 %)
[2025-10-12 20:40:55] 2025-10-12 18:39:40,373 | INFO     | sum of square deviations: 3212467674.5
[2025-10-12 20:40:55] 2025-10-12 18:39:40,375 | INFO     | sum of deviations: -29956132631.499996
[2025-10-12 20:40:55] 2025-10-12 18:39:40,375 | INFO     | mean x: 1760287619.5
[2025-10-12 20:40:55] 2025-10-12 18:39:40,375 | INFO     | mean y: 2505824.5366972475
[2025-10-12 20:40:55] 2025-10-12 18:39:40,375 | INFO     | -- intersect: 16417117500.757442
[2025-10-12 20:40:55] 2025-10-12 18:39:40,375 | INFO     | intersect: 16417117500.757442
[2025-10-12 20:40:55] 2025-10-12 18:39:40,376 | INFO     | chi2: 0.9055074047355672
[2025-10-12 20:40:55] 2025-10-12 18:39:40,376 | INFO     | current chi2=0.9055074047355672 (change=1.5565167465810281 %)
[2025-10-12 20:40:55] 2025-10-12 18:39:40,376 | INFO     | left removable region: 30
[2025-10-12 20:40:55] 2025-10-12 18:39:40,376 | INFO     | sum of square deviations: 2370641658.0
[2025-10-12 20:40:55] 2025-10-12 18:39:40,378 | INFO     | sum of deviations: 5942241922.0
[2025-10-12 20:40:55] 2025-10-12 18:39:40,378 | INFO     | mean x: 1760287894.0
[2025-10-12 20:40:55] 2025-10-12 18:39:40,378 | INFO     | mean y: 2499713.964467005
[2025-10-12 20:40:55] 2025-10-12 18:39:40,378 | INFO     | -- intersect: -4409831640.804922
[2025-10-12 20:40:55] 2025-10-12 18:39:40,378 | INFO     | intersect: -4409831640.804922
[2025-10-12 20:40:55] 2025-10-12 18:39:40,378 | INFO     | chi2: 0.0004616669216086504
[2025-10-12 20:40:55] 2025-10-12 18:39:40,379 | INFO     | -- intersect: -4409831640.804922
[2025-10-12 20:40:55] 2025-10-12 18:39:40,379 | INFO     | current memory leak: 2.51 B/s (using 197 data points, chi2=0.00)
[2025-10-12 20:40:55] 2025-10-12 18:39:40,379 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 20:40:55] 2025-10-12 18:39:40,387 | INFO     | ..............................
[2025-10-12 20:40:55] 2025-10-12 18:39:40,387 | INFO     | . Timing measurements:
[2025-10-12 20:40:55] 2025-10-12 18:39:40,387 | INFO     | . get job = 0 s
[2025-10-12 20:40:55] 2025-10-12 18:39:40,387 | INFO     | . initial setup = 9 s
[2025-10-12 20:40:55] 2025-10-12 18:39:40,387 | INFO     | . payload setup = 147 s
[2025-10-12 20:40:55] 2025-10-12 18:39:40,387 | INFO     | . stage-in = 0 s
[2025-10-12 20:40:55] 2025-10-12 18:39:40,387 | INFO     | . payload execution = 14341 s
[2025-10-12 20:40:55] 2025-10-12 18:39:40,387 | INFO     | . stage-out = 5 s
[2025-10-12 20:40:55] 2025-10-12 18:39:40,388 | INFO     | . log creation = 1 s
[2025-10-12 20:40:55] 2025-10-12 18:39:40,388 | INFO     | ..............................
[2025-10-12 20:40:55] 2025-10-12 18:39:40,907 | INFO     | time since job start (14781s) is within the limit (172800.0s)
[2025-10-12 20:40:55] 2025-10-12 18:39:41,026 | INFO     | 
[2025-10-12 20:40:55] 2025-10-12 18:39:41,026 | INFO     | job summary report
[2025-10-12 20:40:55] 2025-10-12 18:39:41,026 | INFO     | --------------------------------------------------
[2025-10-12 20:40:55] 2025-10-12 18:39:41,026 | INFO     | PanDA job id: 6839316674
[2025-10-12 20:40:55] 2025-10-12 18:39:41,026 | INFO     | task id: 46676269
[2025-10-12 20:40:55] 2025-10-12 18:39:41,026 | INFO     | errors: (none)
[2025-10-12 20:40:55] 2025-10-12 18:39:41,026 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:40:55] 2025-10-12 18:39:41,026 | INFO     | pilot state: finished 
[2025-10-12 20:40:55] 2025-10-12 18:39:41,027 | INFO     | transexitcode: 0
[2025-10-12 20:40:55] 2025-10-12 18:39:41,027 | INFO     | exeerrorcode: 0
[2025-10-12 20:40:55] 2025-10-12 18:39:41,027 | INFO     | exeerrordiag: 
[2025-10-12 20:40:55] 2025-10-12 18:39:41,027 | INFO     | exitcode: 0
[2025-10-12 20:40:55] 2025-10-12 18:39:41,027 | INFO     | exitmsg: OK
[2025-10-12 20:40:55] 2025-10-12 18:39:41,027 | INFO     | cpuconsumptiontime: 53989 s
[2025-10-12 20:40:55] 2025-10-12 18:39:41,027 | INFO     | nevents: 400
[2025-10-12 20:40:55] 2025-10-12 18:39:41,027 | INFO     | neventsw: 0
[2025-10-12 20:40:55] 2025-10-12 18:39:41,027 | INFO     | pid: 16324
[2025-10-12 20:40:55] 2025-10-12 18:39:41,027 | INFO     | pgrp: 16324
[2025-10-12 20:40:55] 2025-10-12 18:39:41,027 | INFO     | corecount: 8
[2025-10-12 20:40:55] 2025-10-12 18:39:41,028 | INFO     | event service: False
[2025-10-12 20:40:55] 2025-10-12 18:39:41,028 | INFO     | sizes: {0: 2348028, 1: 2348714, 2: 2348913, 13: 2348913, 23: 2348969, 34: 2348997, 45: 2349153, 56: 2349181, 66: 2349209, 77: 2349237, 88: 2349293, 96: 2349863, 99
[2025-10-12 20:40:55] 2025-10-12 18:39:41,028 | INFO     | --------------------------------------------------
[2025-10-12 20:40:55] 2025-10-12 18:39:41,028 | INFO     | 
[2025-10-12 20:40:55] 2025-10-12 18:39:41,028 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2025-10-12 20:40:55] 2025-10-12 18:39:41,534 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,534 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,535 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:40:55] 2025-10-12 18:39:41,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:40:55] 2025-10-12 18:39:41,536 | INFO     | job 6839316674 has completed (purged errors)
[2025-10-12 20:40:55] 2025-10-12 18:39:41,536 | INFO     | overall cleanup function is called
[2025-10-12 20:40:55] 2025-10-12 18:39:42,545 | INFO     | --- collectZombieJob: --- 10, [16324]
[2025-10-12 20:40:55] 2025-10-12 18:39:42,546 | INFO     | zombie collector waiting for pid 16324
[2025-10-12 20:40:55] 2025-10-12 18:39:42,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:40:55] 2025-10-12 18:39:42,546 | INFO     | collected zombie processes
[2025-10-12 20:40:55] 2025-10-12 18:39:42,546 | INFO     | will attempt to kill all subprocesses of pid=16324
[2025-10-12 20:40:55] 2025-10-12 18:39:42,676 | INFO     | process IDs to be killed: [16324] (in reverse order)
[2025-10-12 20:40:55] 2025-10-12 18:39:43,397 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:40:55] 2025-10-12 18:39:43,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:40:55] 2025-10-12 18:39:43,401 | INFO     | did not find any defunct processes belonging to 16324
[2025-10-12 20:40:55] 2025-10-12 18:39:43,410 | INFO     | did not find any defunct processes belonging to 16324
[2025-10-12 20:40:55] 2025-10-12 18:39:43,410 | INFO     | ready for new job
[2025-10-12 20:40:55] 2025-10-12 18:39:43,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:40:55] 2025-10-12 18:39:43,413 | INFO     | ***************************************
[2025-10-12 20:40:55] 2025-10-12 18:39:43,413 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:40:55] 2025-10-12 18:39:43,413 | INFO     | ***************************************
[2025-10-12 20:40:55] 2025-10-12 18:39:43,413 | INFO     | 
[2025-10-12 20:40:55] 2025-10-12 18:39:43,413 | INFO     | pilot is running in a VM
[2025-10-12 20:40:55] 2025-10-12 18:39:43,414 | INFO     | architecture information:
[2025-10-12 20:40:55] 2025-10-12 18:39:43,418 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:40:55] 2025-10-12 18:39:43,679 | INFO     | cat /etc/os-release:
[2025-10-12 20:40:55] NAME="CentOS Linux"
[2025-10-12 20:40:55] VERSION="7 (Core)"
[2025-10-12 20:40:55] ID="centos"
[2025-10-12 20:40:55] ID_LIKE="rhel fedora"
[2025-10-12 20:40:55] VERSION_ID="7"
[2025-10-12 20:40:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:40:55] ANSI_COLOR="0;31"
[2025-10-12 20:40:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:40:55] HOME_URL="https://www.centos.org/"
[2025-10-12 20:40:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:40:55] 
[2025-10-12 20:40:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:40:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:40:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:40:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:40:55] 
[2025-10-12 20:40:55] 2025-10-12 18:39:43,680 | INFO     | ***************************************
[2025-10-12 20:40:55] 2025-10-12 18:39:44,183 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2025-10-12 20:40:55] 2025-10-12 18:39:44,450 | INFO     | sufficient remaining disk space (495855861760 B)
[2025-10-12 20:40:55] 2025-10-12 18:39:44,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:40:55] 2025-10-12 18:39:44,451 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:40:55] 2025-10-12 18:39:44,451 | INFO     | update_server=False
[2025-10-12 20:40:55] 2025-10-12 18:39:44,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:40:55] 2025-10-12 18:39:44,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:40:55] 2025-10-12 18:39:44,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:40:55] 2025-10-12 18:39:44,453 | INFO     | aborting loop
[2025-10-12 20:40:55] 2025-10-12 18:39:44,962 | INFO     | all data control threads have been joined
[2025-10-12 20:40:55] 2025-10-12 18:39:45,456 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:45,459 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:45,483 | INFO     | all payload control threads have been joined
[2025-10-12 20:40:55] 2025-10-12 18:39:45,564 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:45,567 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:45,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:40:55] 2025-10-12 18:39:45,905 | INFO     | all job control threads have been joined
[2025-10-12 20:40:55] 2025-10-12 18:39:45,969 | INFO     | [data] control thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:46,341 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:46,444 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:46,447 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:46,458 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:46,490 | INFO     | [payload] control thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:46,578 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:46,698 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:46,799 | INFO     | [job] validate thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:46,912 | INFO     | [job] control thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:46,976 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:39:47,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:40:55] 2025-10-12 18:39:51,583 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:40:55] 2025-10-12 18:40:14,111 | INFO     | PID=9777 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 20:40:55] 2025-10-12 18:40:14,111 | INFO     | .. there are 9 such processes running
[2025-10-12 20:40:55] 2025-10-12 18:40:14,113 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:40:55] 2025-10-12 18:40:14,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:40:55] 2025-10-12 18:40:14,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:40:55] 2025-10-12 18:40:44,320 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:40:55] 2025-10-12 18:40:45,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140546363594560)>', '<ExcThread(monitor, started 140545909298944)>']
[2025-10-12 20:40:55] 2025-10-12 18:40:46,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:40:55] 2025-10-12 18:40:46,308 | INFO     | [monitor] control thread has ended
[2025-10-12 20:40:55] 2025-10-12 18:40:50,762 | INFO     | all workflow threads have been joined
[2025-10-12 20:40:55] 2025-10-12 18:40:50,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:40:55] 2025-10-12 18:40:50,762 | INFO     | traces error code: 0
[2025-10-12 20:40:55] 2025-10-12 18:40:50,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:40:55] 2025-10-12 18:40:51,175 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:40:55] 2025-10-12 18:40:51,255 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:40:55] 2025-10-12 18:40:51,311 [wrapper] pilotpid: 9777
[2025-10-12 20:40:55] 2025-10-12 18:40:51,359 [wrapper] Pilot exit status: 0
[2025-10-12 20:40:55] 2025-10-12 18:40:51,776 [wrapper] pandaids: 6839316674
[2025-10-12 20:40:55] 2025-10-12 18:40:52,690 [wrapper] cleanup supervisor_pilot 10634 9778
[2025-10-12 20:40:55] 2025-10-12 18:40:52,749 [wrapper] Test setup, not cleaning
[2025-10-12 20:40:55] 2025-10-12 18:40:52,840 [wrapper] apfmon messages muted
[2025-10-12 20:40:55] 2025-10-12 18:40:52,921 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:40:55] 2025-10-12 18:40:52,956 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:40:55]  *** Error codes and diagnostics ***
[2025-10-12 20:40:55]     "exeErrorCode": 0,
[2025-10-12 20:40:55]     "exeErrorDiag": "",
[2025-10-12 20:40:55]     "pilotErrorCode": 0,
[2025-10-12 20:40:55]     "pilotErrorDiag": "",
[2025-10-12 20:40:55]  *** Listing of results directory ***
[2025-10-12 20:40:55] total 412972
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc    557409 Oct 12 03:53 pilot3.tar.gz
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc      5112 Oct 12 04:29 queuedata.json
[2025-10-12 20:40:55] -rwx------. 1 boinc boinc     36292 Oct 12 04:30 runpilot2-wrapper.sh
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:40:55] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:29 run_atlas
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:29 job.xml
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc      6391 Oct 12 16:29 init_data.xml
[2025-10-12 20:40:55] -rw-r--r--. 2 boinc boinc 220085776 Oct 12 16:29 EVNT.46676267._003182.pool.root.1
[2025-10-12 20:40:55] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:29 start_atlas.sh
[2025-10-12 20:40:55] drwxrwx--x. 2 boinc boinc        68 Oct 12 16:29 shared
[2025-10-12 20:40:55] -rw-r--r--. 2 boinc boinc    569679 Oct 12 16:29 input.tar.gz
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:29 boinc_lockfile
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc      2549 Oct 12 16:29 pandaJob.out
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc    975528 Oct 12 16:33 agis_schedconf.cvmfs.json
[2025-10-12 20:40:55] drwx------. 5 boinc boinc      4096 Oct 12 16:33 pilot3
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc 194033838 Oct 12 20:36 HITS.46676269._069344.pool.root.1
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc       531 Oct 12 20:37 boinc_task_state.xml
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc      1013 Oct 12 20:37 memory_monitor_summary.json
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc   1560580 Oct 12 20:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc    460229 Oct 12 20:38 log.46676269._069344.job.log.tgz.1
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc      7774 Oct 12 20:39 heartbeat.json
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc        95 Oct 12 20:40 pilot_heartbeat.json
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc      4884 Oct 12 20:40 pilotlog.txt
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc        28 Oct 12 20:40 wrapper_checkpoint.txt
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc      8192 Oct 12 20:40 boinc_mmap_file
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc   1975524 Oct 12 20:40 log.46676269._069344.job.log.1
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc       357 Oct 12 20:40 output.list
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc       620 Oct 12 20:40 runtime_log
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc   2457600 Oct 12 20:40 result.tar.gz
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc      8717 Oct 12 20:40 runtime_log.err
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc       656 Oct 12 20:40 gLHODmu10R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0LiNDmH8S1Yn.diag
[2025-10-12 20:40:55] -rw-r--r--. 1 boinc boinc     20636 Oct 12 20:40 stderr.txt
[2025-10-12 20:40:55] HITS file was successfully produced:
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc 194033838 Oct 12 20:36 shared/HITS.pool.root.1
[2025-10-12 20:40:55]  *** Contents of shared directory: ***
[2025-10-12 20:40:55] total 407392
[2025-10-12 20:40:55] -rw-r--r--. 2 boinc boinc 220085776 Oct 12 16:29 ATLAS.root_0
[2025-10-12 20:40:55] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:29 start_atlas.sh
[2025-10-12 20:40:55] -rw-r--r--. 2 boinc boinc    569679 Oct 12 16:29 input.tar.gz
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc 194033838 Oct 12 20:36 HITS.pool.root.1
[2025-10-12 20:40:55] -rw-------. 1 boinc boinc   2457600 Oct 12 20:40 result.tar.gz
20:40:57 (5993): run_atlas exited; CPU time 54196.950295
20:40:57 (5993): called boinc_finish(0)

</stderr_txt>
]]>

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