Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:48:57 (27385): wrapper (7.7.26015): starting
06:48:57 (27385): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 06:48:57] Arguments: --nthreads 12
[2025-10-12 06:48:57] Threads: 12
[2025-10-12 06:48:57] Checking for CVMFS
[2025-10-12 06:48:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:48:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:48:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:48:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:48:57] 2.11.2.0 30551 52723 86560 151617 1 59 14029977 20275201 1 130560 0 30341242 99.957 2392352 39780 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 06:48:57] CVMFS is ok
[2025-10-12 06:48:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:48:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:48:57] Further information can be found at the LHC@home message board.
[2025-10-12 06:48:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:48:57] Checking for apptainer binary...
[2025-10-12 06:48:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:48:57] Running /usr/bin/apptainer --version
[2025-10-12 06:48:57] apptainer version 1.3.2-1.el7
[2025-10-12 06:48:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:48:59] c-205-16.aglt2.org
[2025-10-12 06:48:59] apptainer works
[2025-10-12 06:48:59] Set ATHENA_PROC_NUMBER=12
[2025-10-12 06:48:59] Set ATHENA_CORE_NUMBER=12
[2025-10-12 06:48:59] Starting ATLAS job with PandaID=6839774537
[2025-10-12 06:48:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:05:26]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:05:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 08:05:26]  replicas=None
[2025-10-12 08:05:26]  scope=mc23_13p6TeV
[2025-10-12 08:05:26]  status=None
[2025-10-12 08:05:26]  status_code=0
[2025-10-12 08:05:26]  storage_token=
[2025-10-12 08:05:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839774537/log.46676269._074429.job.log.tgz.1
[2025-10-12 08:05:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/47/log.46676269._074429.job.log.tgz.1
[2025-10-12 08:05:26]  workdir=None
[2025-10-12 08:05:26] ]
[2025-10-12 08:05:26] 2025-10-12 12:04:31,238 | INFO     | transferring file log.46676269._074429.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839774537/log.46676269._074429.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 08:05:26] 2025-10-12 12:04:31,238 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839774537/log.46676269._074429.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._074429.job
[2025-10-12 08:05:26] 2025-10-12 12:04:31,260 | INFO     | adding to output.list: log.46676269._074429.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/47/log.46676269._074429.job.log.tg
[2025-10-12 08:05:26] 2025-10-12 12:04:31,261 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 08:05:26] 2025-10-12 12:04:31,261 | INFO     | summary of transferred files:
[2025-10-12 08:05:26] 2025-10-12 12:04:31,261 | INFO     |  -- lfn=log.46676269._074429.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 08:05:26] 2025-10-12 12:04:31,262 | INFO     | stage-out finished correctly
[2025-10-12 08:05:26] 2025-10-12 12:04:31,349 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 08:05:26] 2025-10-12 12:04:31,391 | INFO     | time since job start (4517s) is within the limit (172800.0s)
[2025-10-12 08:05:26] 2025-10-12 12:04:31,441 | INFO     | number of running child processes to parent process 5376: 1
[2025-10-12 08:05:26] 2025-10-12 12:04:31,441 | INFO     | maximum number of monitored processes: 6
[2025-10-12 08:05:26] 2025-10-12 12:04:33,139 | INFO     | job 6839774537 has state=finished
[2025-10-12 08:05:26] 2025-10-12 12:04:33,140 | INFO     | preparing for final server update for job 6839774537 in state='finished'
[2025-10-12 08:05:26] 2025-10-12 12:04:33,140 | INFO     | this job has now completed (state=finished)
[2025-10-12 08:05:26] 2025-10-12 12:04:33,140 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 08:05:26] 2025-10-12 12:04:33,140 | INFO     | log transfer has been attempted: DONE
[2025-10-12 08:05:26] 2025-10-12 12:04:33,141 | INFO     | job 6839774537 has finished - writing final server update
[2025-10-12 08:05:26] 2025-10-12 12:04:33,141 | INFO     | total number of processed events: 400 (read)
[2025-10-12 08:05:26] 2025-10-12 12:04:33,142 | INFO     | executing command: lscpu
[2025-10-12 08:05:26] 2025-10-12 12:04:33,167 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 08:05:26] 2025-10-12 12:04:33,397 | INFO     | time since job start (4519s) is within the limit (172800.0s)
[2025-10-12 08:05:26] 2025-10-12 12:04:33,944 | INFO     | monitor loop #337: job 0:6839774537 is in state 'finished'
[2025-10-12 08:05:26] 2025-10-12 12:04:33,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:05:26] 2025-10-12 12:04:35,402 | INFO     | time since job start (4521s) is within the limit (172800.0s)
[2025-10-12 08:05:26] 2025-10-12 12:04:36,448 | INFO     | monitor loop #338: job 0:6839774537 is in state 'finished'
[2025-10-12 08:05:26] 2025-10-12 12:04:36,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:05:26] 2025-10-12 12:04:37,407 | INFO     | time since job start (4523s) is within the limit (172800.0s)
[2025-10-12 08:05:26] 2025-10-12 12:04:38,169 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 08:05:26] 2025-10-12 12:04:38,173 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-10-12 08:05:26] 2025-10-12 12:04:38,175 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839774537/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:05:26] 2025-10-12 12:04:38,176 | INFO     | extracted standard info from prmon json
[2025-10-12 08:05:26] 2025-10-12 12:04:38,176 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:05:26] 2025-10-12 12:04:38,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:05:26] 2025-10-12 12:04:38,176 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:05:26] 2025-10-12 12:04:38,176 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:05:26] 2025-10-12 12:04:38,178 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:05:26] 2025-10-12 12:04:38,179 | INFO     | sum of square deviations: 93240818.0
[2025-10-12 08:05:26] 2025-10-12 12:04:38,179 | INFO     | sum of deviations: -4552133540.0
[2025-10-12 08:05:26] 2025-10-12 12:04:38,179 | INFO     | mean x: 1760268501.0
[2025-10-12 08:05:26] 2025-10-12 12:04:38,179 | INFO     | mean y: 2721756.76119403
[2025-10-12 08:05:26] 2025-10-12 12:04:38,179 | INFO     | -- intersect: 85941235110.51173
[2025-10-12 08:05:26] 2025-10-12 12:04:38,180 | INFO     | intersect: 85941235110.51173
[2025-10-12 08:05:26] 2025-10-12 12:04:38,180 | INFO     | chi2: 0.053724955814063335
[2025-10-12 08:05:26] 2025-10-12 12:04:38,180 | INFO     | -- intersect: 85941235110.51173
[2025-10-12 08:05:26] 2025-10-12 12:04:38,180 | INFO     | current memory leak: -48.82 B/s (using 67 data points, chi2=0.05)
[2025-10-12 08:05:26] 2025-10-12 12:04:38,181 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-10-12 08:05:26] 2025-10-12 12:04:38,181 | INFO     | ..............................
[2025-10-12 08:05:26] 2025-10-12 12:04:38,181 | INFO     | . Timing measurements:
[2025-10-12 08:05:26] 2025-10-12 12:04:38,181 | INFO     | . get job = 0 s
[2025-10-12 08:05:26] 2025-10-12 12:04:38,181 | INFO     | . initial setup = 2 s
[2025-10-12 08:05:26] 2025-10-12 12:04:38,181 | INFO     | . payload setup = 7 s
[2025-10-12 08:05:26] 2025-10-12 12:04:38,181 | INFO     | . stage-in = 0 s
[2025-10-12 08:05:26] 2025-10-12 12:04:38,181 | INFO     | . payload execution = 4489 s
[2025-10-12 08:05:26] 2025-10-12 12:04:38,182 | INFO     | . stage-out = 0 s
[2025-10-12 08:05:26] 2025-10-12 12:04:38,182 | INFO     | . log creation = 0 s
[2025-10-12 08:05:26] 2025-10-12 12:04:38,182 | INFO     | ..............................
[2025-10-12 08:05:26] 2025-10-12 12:04:38,264 | INFO     | 
[2025-10-12 08:05:26] 2025-10-12 12:04:38,265 | INFO     | job summary report
[2025-10-12 08:05:26] 2025-10-12 12:04:38,265 | INFO     | --------------------------------------------------
[2025-10-12 08:05:26] 2025-10-12 12:04:38,265 | INFO     | PanDA job id: 6839774537
[2025-10-12 08:05:26] 2025-10-12 12:04:38,265 | INFO     | task id: 46676269
[2025-10-12 08:05:26] 2025-10-12 12:04:38,265 | INFO     | errors: (none)
[2025-10-12 08:05:26] 2025-10-12 12:04:38,265 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:05:26] 2025-10-12 12:04:38,266 | INFO     | pilot state: finished 
[2025-10-12 08:05:26] 2025-10-12 12:04:38,266 | INFO     | transexitcode: 0
[2025-10-12 08:05:26] 2025-10-12 12:04:38,266 | INFO     | exeerrorcode: 0
[2025-10-12 08:05:26] 2025-10-12 12:04:38,266 | INFO     | exeerrordiag: 
[2025-10-12 08:05:26] 2025-10-12 12:04:38,266 | INFO     | exitcode: 0
[2025-10-12 08:05:26] 2025-10-12 12:04:38,266 | INFO     | exitmsg: OK
[2025-10-12 08:05:26] 2025-10-12 12:04:38,266 | INFO     | cpuconsumptiontime: 48976 s
[2025-10-12 08:05:26] 2025-10-12 12:04:38,267 | INFO     | nevents: 400
[2025-10-12 08:05:26] 2025-10-12 12:04:38,267 | INFO     | neventsw: 0
[2025-10-12 08:05:26] 2025-10-12 12:04:38,267 | INFO     | pid: 5376
[2025-10-12 08:05:26] 2025-10-12 12:04:38,267 | INFO     | pgrp: 5376
[2025-10-12 08:05:26] 2025-10-12 12:04:38,267 | INFO     | corecount: 12
[2025-10-12 08:05:26] 2025-10-12 12:04:38,267 | INFO     | event service: False
[2025-10-12 08:05:26] 2025-10-12 12:04:38,268 | INFO     | sizes: {0: 2348807, 5: 2349069, 11: 2349125, 4499: 2375202, 4500: 2384255, 4501: 2384255, 4507: 2384577}
[2025-10-12 08:05:26] 2025-10-12 12:04:38,268 | INFO     | --------------------------------------------------
[2025-10-12 08:05:26] 2025-10-12 12:04:38,268 | INFO     | 
[2025-10-12 08:05:26] 2025-10-12 12:04:38,268 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 08:05:26] 2025-10-12 12:04:38,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,293 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,295 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:05:26] 2025-10-12 12:04:38,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,295 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:05:26] 2025-10-12 12:04:38,295 | INFO     | job 6839774537 has completed (purged errors)
[2025-10-12 08:05:26] 2025-10-12 12:04:38,296 | INFO     | overall cleanup function is called
[2025-10-12 08:05:26] 2025-10-12 12:04:39,304 | INFO     | --- collectZombieJob: --- 10, [5376]
[2025-10-12 08:05:26] 2025-10-12 12:04:39,304 | INFO     | zombie collector waiting for pid 5376
[2025-10-12 08:05:26] 2025-10-12 12:04:39,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:05:26] 2025-10-12 12:04:39,304 | INFO     | collected zombie processes
[2025-10-12 08:05:26] 2025-10-12 12:04:39,305 | INFO     | will attempt to kill all subprocesses of pid=5376
[2025-10-12 08:05:26] 2025-10-12 12:04:39,397 | INFO     | process IDs to be killed: [5376] (in reverse order)
[2025-10-12 08:05:26] 2025-10-12 12:04:39,449 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:05:26] 2025-10-12 12:04:39,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:05:26] 2025-10-12 12:04:39,453 | INFO     | did not find any defunct processes belonging to 5376
[2025-10-12 08:05:26] 2025-10-12 12:04:39,455 | INFO     | did not find any defunct processes belonging to 5376
[2025-10-12 08:05:26] 2025-10-12 12:04:39,455 | INFO     | ready for new job
[2025-10-12 08:05:26] 2025-10-12 12:04:39,456 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:05:26] 2025-10-12 12:04:39,457 | INFO     | ***************************************
[2025-10-12 08:05:26] 2025-10-12 12:04:39,457 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:05:26] 2025-10-12 12:04:39,457 | INFO     | ***************************************
[2025-10-12 08:05:26] 2025-10-12 12:04:39,457 | INFO     | 
[2025-10-12 08:05:26] 2025-10-12 12:04:39,458 | INFO     | architecture information:
[2025-10-12 08:05:26] 2025-10-12 12:04:39,458 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:05:26] 2025-10-12 12:04:39,474 | INFO     | cat /etc/os-release:
[2025-10-12 08:05:26] NAME="CentOS Linux"
[2025-10-12 08:05:26] VERSION="7 (Core)"
[2025-10-12 08:05:26] ID="centos"
[2025-10-12 08:05:26] ID_LIKE="rhel fedora"
[2025-10-12 08:05:26] VERSION_ID="7"
[2025-10-12 08:05:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:05:26] ANSI_COLOR="0;31"
[2025-10-12 08:05:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:05:26] HOME_URL="https://www.centos.org/"
[2025-10-12 08:05:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:05:26] 
[2025-10-12 08:05:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:05:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:05:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:05:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:05:26] 
[2025-10-12 08:05:26] 2025-10-12 12:04:39,475 | INFO     | ***************************************
[2025-10-12 08:05:26] 2025-10-12 12:04:39,977 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 08:05:26] 2025-10-12 12:04:40,071 | INFO     | sufficient remaining disk space (29496442880 B)
[2025-10-12 08:05:26] 2025-10-12 12:04:40,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:05:26] 2025-10-12 12:04:40,072 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:05:26] 2025-10-12 12:04:40,072 | INFO     | update_server=False
[2025-10-12 08:05:26] 2025-10-12 12:04:40,072 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:05:26] 2025-10-12 12:04:40,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:05:26] 2025-10-12 12:04:40,073 | INFO     | aborting loop
[2025-10-12 08:05:26] 2025-10-12 12:04:40,073 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:05:26] 2025-10-12 12:04:40,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:05:26] 2025-10-12 12:04:40,431 | INFO     | all payload control threads have been joined
[2025-10-12 08:05:26] 2025-10-12 12:04:40,973 | INFO     | all data control threads have been joined
[2025-10-12 08:05:26] 2025-10-12 12:04:41,074 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:41,078 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:41,079 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:41,083 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:41,094 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:41,286 | INFO     | all job control threads have been joined
[2025-10-12 08:05:26] 2025-10-12 12:04:41,287 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:41,436 | INFO     | [payload] control thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:41,475 | INFO     | [job] validate thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:41,900 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:41,941 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:05:26] 2025-10-12 12:04:41,978 | INFO     | [data] control thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:42,072 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:42,079 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:42,080 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:42,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:42,292 | INFO     | [job] control thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:04:45,947 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:05:26] 2025-10-12 12:05:10,615 | INFO     | PID=31120 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 08:05:26] 2025-10-12 12:05:10,615 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:05:26] 2025-10-12 12:05:10,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:05:26] 2025-10-12 12:05:10,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:05:26] 2025-10-12 12:05:20,996 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:05:26] 2025-10-12 12:05:21,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496798791488)>', '<ExcThread(monitor, started 140495544112896)>']
[2025-10-12 08:05:26] 2025-10-12 12:05:21,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:05:26] 2025-10-12 12:05:21,672 | INFO     | [monitor] control thread has ended
[2025-10-12 08:05:26] 2025-10-12 12:05:26,554 | INFO     | all workflow threads have been joined
[2025-10-12 08:05:26] 2025-10-12 12:05:26,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:05:26] 2025-10-12 12:05:26,557 | INFO     | traces error code: 0
[2025-10-12 08:05:26] 2025-10-12 12:05:26,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:05:26] 2025-10-12 12:05:26,656 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:05:26] 2025-10-12 12:05:26,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:05:26] 2025-10-12 12:05:26,664 [wrapper] pilotpid: 31120
[2025-10-12 08:05:26] 2025-10-12 12:05:26,668 [wrapper] Pilot exit status: 0
[2025-10-12 08:05:26] 2025-10-12 12:05:26,683 [wrapper] pandaids: 6839774537
[2025-10-12 08:05:26] 2025-10-12 12:05:26,728 [wrapper] cleanup supervisor_pilot 25107 31121
[2025-10-12 08:05:26] 2025-10-12 12:05:26,732 [wrapper] Test setup, not cleaning
[2025-10-12 08:05:26] 2025-10-12 12:05:26,736 [wrapper] apfmon messages muted
[2025-10-12 08:05:26] 2025-10-12 12:05:26,740 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:05:26] 2025-10-12 12:05:26,744 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:05:26]  *** Error codes and diagnostics ***
[2025-10-12 08:05:26]     "exeErrorCode": 0,
[2025-10-12 08:05:26]     "exeErrorDiag": "",
[2025-10-12 08:05:26]     "pilotErrorCode": 0,
[2025-10-12 08:05:26]     "pilotErrorDiag": "",
[2025-10-12 08:05:26]  *** Listing of results directory ***
[2025-10-12 08:05:26] total 414396
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 04:37 pilot3.tar.gz
[2025-10-12 08:05:26] -rwx------ 1 boincer umatlas     36292 Oct 12 04:38 runpilot2-wrapper.sh
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 04:38 queuedata.json
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas       100 Oct 12 06:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:05:26] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 06:48 run_atlas
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas       105 Oct 12 06:48 job.xml
[2025-10-12 08:05:26] -rw-r--r-- 2 boincer umatlas 222381844 Oct 12 06:48 EVNT.46676267._001573.pool.root.1
[2025-10-12 08:05:26] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 06:48 input.tar.gz
[2025-10-12 08:05:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:48 start_atlas.sh
[2025-10-12 08:05:26] drwxrwx--x 2 boincer umatlas      4096 Oct 12 06:48 shared
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas         0 Oct 12 06:48 boinc_lockfile
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 06:48 pandaJob.out
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas    975520 Oct 12 06:49 agis_schedconf.cvmfs.json
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas   1560580 Oct 12 06:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:05:26] drwx------ 5 boincer umatlas      4096 Oct 12 06:49 pilot3
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 08:00 init_data.xml
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas 195966745 Oct 12 08:03 HITS.46676269._074429.pool.root.1
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas        95 Oct 12 08:04 pilot_heartbeat.json
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas       530 Oct 12 08:04 boinc_task_state.xml
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas      1050 Oct 12 08:04 memory_monitor_summary.json
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas    390384 Oct 12 08:04 log.46676269._074429.job.log.tgz.1
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas      7857 Oct 12 08:04 heartbeat.json
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 08:05 boinc_mmap_file
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas        27 Oct 12 08:05 wrapper_checkpoint.txt
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas      4746 Oct 12 08:05 pilotlog.txt
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas    655212 Oct 12 08:05 log.46676269._074429.job.log.1
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas       357 Oct 12 08:05 output.list
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas       620 Oct 12 08:05 runtime_log
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas   1064960 Oct 12 08:05 result.tar.gz
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 08:05 runtime_log.err
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas       659 Oct 12 08:05 1R9LDmNm6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJBjNDmeuWrRo.diag
[2025-10-12 08:05:26] -rw-r--r-- 1 boincer umatlas     21810 Oct 12 08:05 stderr.txt
[2025-10-12 08:05:26] HITS file was successfully produced:
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas 195966745 Oct 12 08:03 shared/HITS.pool.root.1
[2025-10-12 08:05:26]  *** Contents of shared directory: ***
[2025-10-12 08:05:26] total 410168
[2025-10-12 08:05:26] -rw-r--r-- 2 boincer umatlas 222381844 Oct 12 06:48 ATLAS.root_0
[2025-10-12 08:05:26] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 06:48 input.tar.gz
[2025-10-12 08:05:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:48 start_atlas.sh
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas 195966745 Oct 12 08:03 HITS.pool.root.1
[2025-10-12 08:05:26] -rw------- 1 boincer umatlas   1064960 Oct 12 08:05 result.tar.gz
08:05:28 (27385): run_atlas exited; CPU time 48941.959783
08:05:28 (27385): called boinc_finish(0)

</stderr_txt>
]]>

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