Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
11:10:50 (3184908): wrapper (7.7.26015): starting
11:10:50 (3184908): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 11:10:50] Arguments: --nthreads 12
[2025-10-12 11:10:50] Threads: 12
[2025-10-12 11:10:50] Checking for CVMFS
[2025-10-12 11:10:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:10:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:10:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:10:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:10:50] 2.11.0.0 3299214 2984 84556 151618 3 60 5363779 6144001 13120 130560 0 58418342 100.000 107476 197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 11:10:50] CVMFS is ok
[2025-10-12 11:10:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:10:50] Checking for apptainer binary...
[2025-10-12 11:10:50] apptainer is not installed, using version from CVMFS
[2025-10-12 11:10:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:10:51] radiat0r
[2025-10-12 11:10:51] apptainer works
[2025-10-12 11:10:51] Set ATHENA_PROC_NUMBER=12
[2025-10-12 11:10:51] Set ATHENA_CORE_NUMBER=12
[2025-10-12 11:10:51] Starting ATLAS job with PandaID=6838634830
[2025-10-12 11:10:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:00:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:00:35] 2025-10-12 11:59:53,468 | INFO     | time since job start (2928s) is within the limit (172800.0s)
[2025-10-12 12:00:35] 2025-10-12 11:59:54,532 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:00:35] 2025-10-12 11:59:55,472 | INFO     | time since job start (2930s) is within the limit (172800.0s)
[2025-10-12 12:00:35] 2025-10-12 11:59:55,811 | INFO     | job 6838634830 has state=finished
[2025-10-12 12:00:35] 2025-10-12 11:59:55,811 | INFO     | preparing for final server update for job 6838634830 in state='finished'
[2025-10-12 12:00:35] 2025-10-12 11:59:55,812 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:00:35] 2025-10-12 11:59:55,812 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:00:35] 2025-10-12 11:59:55,812 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:00:35] 2025-10-12 11:59:55,812 | INFO     | job 6838634830 has finished - writing final server update
[2025-10-12 12:00:35] 2025-10-12 11:59:55,812 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:00:35] 2025-10-12 11:59:55,814 | INFO     | executing command: lscpu
[2025-10-12 12:00:35] 2025-10-12 11:59:56,016 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:00:35] 2025-10-12 11:59:57,475 | INFO     | time since job start (2932s) is within the limit (172800.0s)
[2025-10-12 12:00:35] 2025-10-12 11:59:58,565 | WARNING  | process 3216962 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 12:00:35] 2025-10-12 11:59:58,566 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6838634830/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:00:35] 2025-10-12 11:59:58,567 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6838634830/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:00:35] 2025-10-12 11:59:58,567 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-12 12:00:35] 2025-10-12 11:59:58,567 | WARNING  | maxPSS not found in memory monitor output
[2025-10-12 12:00:35] 2025-10-12 11:59:58,568 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3839036 B
[2025-10-12 12:00:35] 2025-10-12 11:59:58,568 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15538 B
[2025-10-12 12:00:35] 2025-10-12 11:59:58,568 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-10-12 12:00:35] 2025-10-12 11:59:59,479 | INFO     | time since job start (2934s) is within the limit (172800.0s)
[2025-10-12 12:00:35] 2025-10-12 12:00:01,483 | INFO     | time since job start (2936s) is within the limit (172800.0s)
[2025-10-12 12:00:35] 2025-10-12 12:00:02,706 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 12:00:35] 2025-10-12 12:00:02,736 | INFO     | sufficient remaining disk space (1724216508416 B)
[2025-10-12 12:00:35] 2025-10-12 12:00:02,737 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 12:00:35] 2025-10-12 12:00:02,739 | INFO     | size of work directory /var/lib/boinc/slots/20/PanDA_Pilot-6838634830: 4125017 B (within 2537553920 B limit)
[2025-10-12 12:00:35] 2025-10-12 12:00:02,739 | INFO     | pfn file=/var/lib/boinc/slots/20/PanDA_Pilot-6838634830/HITS.46676269._062125.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 12:00:35] 2025-10-12 12:00:02,740 | INFO     | total size of present files: 0 B (workdir size: 4125017 B)
[2025-10-12 12:00:35] 2025-10-12 12:00:02,740 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/20/PanDA_Pilot-6838634830/HITS.46676269._062125.pool.root.1 since it does not exist
[2025-10-12 12:00:35] 2025-10-12 12:00:02,809 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2367.4945781250003
[2025-10-12 12:00:35] 2025-10-12 12:00:02,871 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6838634830/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:00:35] 2025-10-12 12:00:02,872 | INFO     | extracted standard info from prmon json
[2025-10-12 12:00:35] 2025-10-12 12:00:02,872 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:00:35] 2025-10-12 12:00:02,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:00:35] 2025-10-12 12:00:02,873 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:00:35] 2025-10-12 12:00:02,873 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:00:35] 2025-10-12 12:00:02,874 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:00:35] 2025-10-12 12:00:02,875 | INFO     | sum of square deviations: 21358540.0
[2025-10-12 12:00:35] 2025-10-12 12:00:02,875 | INFO     | sum of deviations: 187379373.0
[2025-10-12 12:00:35] 2025-10-12 12:00:02,875 | INFO     | mean x: 1760269024.0
[2025-10-12 12:00:35] 2025-10-12 12:00:02,875 | INFO     | mean y: 2664007.8292682925
[2025-10-12 12:00:35] 2025-10-12 12:00:02,875 | INFO     | -- intersect: -15440250443.647375
[2025-10-12 12:00:35] 2025-10-12 12:00:02,876 | INFO     | intersect: -15440250443.647375
[2025-10-12 12:00:35] 2025-10-12 12:00:02,876 | INFO     | chi2: 0.00029628795645207146
[2025-10-12 12:00:35] 2025-10-12 12:00:02,876 | INFO     | -- intersect: -15440250443.647375
[2025-10-12 12:00:35] 2025-10-12 12:00:02,876 | INFO     | current memory leak: 8.77 B/s (using 41 data points, chi2=0.00)
[2025-10-12 12:00:35] 2025-10-12 12:00:02,877 | INFO     | could have reported an average CPU frequency of 2346 MHz (5 samples)
[2025-10-12 12:00:35] 2025-10-12 12:00:02,877 | INFO     | ..............................
[2025-10-12 12:00:35] 2025-10-12 12:00:02,877 | INFO     | . Timing measurements:
[2025-10-12 12:00:35] 2025-10-12 12:00:02,877 | INFO     | . get job = 0 s
[2025-10-12 12:00:35] 2025-10-12 12:00:02,877 | INFO     | . initial setup = 1 s
[2025-10-12 12:00:35] 2025-10-12 12:00:02,877 | INFO     | . payload setup = 8 s
[2025-10-12 12:00:35] 2025-10-12 12:00:02,877 | INFO     | . stage-in = 0 s
[2025-10-12 12:00:35] 2025-10-12 12:00:02,878 | INFO     | . payload execution = 2895 s
[2025-10-12 12:00:35] 2025-10-12 12:00:02,878 | INFO     | . stage-out = 0 s
[2025-10-12 12:00:35] 2025-10-12 12:00:02,878 | INFO     | . log creation = 0 s
[2025-10-12 12:00:35] 2025-10-12 12:00:02,878 | INFO     | ..............................
[2025-10-12 12:00:35] 2025-10-12 12:00:02,976 | INFO     | 
[2025-10-12 12:00:35] 2025-10-12 12:00:02,976 | INFO     | job summary report
[2025-10-12 12:00:35] 2025-10-12 12:00:02,976 | INFO     | --------------------------------------------------
[2025-10-12 12:00:35] 2025-10-12 12:00:02,976 | INFO     | PanDA job id: 6838634830
[2025-10-12 12:00:35] 2025-10-12 12:00:02,976 | INFO     | task id: 46676269
[2025-10-12 12:00:35] 2025-10-12 12:00:02,977 | INFO     | errors: (none)
[2025-10-12 12:00:35] 2025-10-12 12:00:02,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:00:35] 2025-10-12 12:00:02,977 | INFO     | pilot state: finished 
[2025-10-12 12:00:35] 2025-10-12 12:00:02,977 | INFO     | transexitcode: 0
[2025-10-12 12:00:35] 2025-10-12 12:00:02,978 | INFO     | exeerrorcode: 0
[2025-10-12 12:00:35] 2025-10-12 12:00:02,978 | INFO     | exeerrordiag: 
[2025-10-12 12:00:35] 2025-10-12 12:00:02,978 | INFO     | exitcode: 0
[2025-10-12 12:00:35] 2025-10-12 12:00:02,978 | INFO     | exitmsg: OK
[2025-10-12 12:00:35] 2025-10-12 12:00:02,978 | INFO     | cpuconsumptiontime: 31131 s
[2025-10-12 12:00:35] 2025-10-12 12:00:02,978 | INFO     | nevents: 400
[2025-10-12 12:00:35] 2025-10-12 12:00:02,978 | INFO     | neventsw: 0
[2025-10-12 12:00:35] 2025-10-12 12:00:02,979 | INFO     | pid: 3216962
[2025-10-12 12:00:35] 2025-10-12 12:00:02,979 | INFO     | pgrp: 3216962
[2025-10-12 12:00:35] 2025-10-12 12:00:02,979 | INFO     | corecount: 12
[2025-10-12 12:00:35] 2025-10-12 12:00:02,979 | INFO     | event service: False
[2025-10-12 12:00:35] 2025-10-12 12:00:02,979 | INFO     | sizes: {0: 2348687, 1: 2348886, 7: 2349148, 12: 2349176, 2907: 2374683, 2908: 2383683, 2910: 2383867, 2918: 2384121}
[2025-10-12 12:00:35] 2025-10-12 12:00:02,979 | INFO     | --------------------------------------------------
[2025-10-12 12:00:35] 2025-10-12 12:00:02,979 | INFO     | 
[2025-10-12 12:00:35] 2025-10-12 12:00:02,980 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-10-12 12:00:35] 2025-10-12 12:00:03,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,013 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,013 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,014 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,014 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:00:35] 2025-10-12 12:00:03,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,014 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:00:35] 2025-10-12 12:00:03,014 | INFO     | job 6838634830 has completed (purged errors)
[2025-10-12 12:00:35] 2025-10-12 12:00:03,015 | INFO     | overall cleanup function is called
[2025-10-12 12:00:35] 2025-10-12 12:00:03,692 | INFO     | number of running child processes to parent process 3216962: 1
[2025-10-12 12:00:35] 2025-10-12 12:00:03,692 | INFO     | maximum number of monitored processes: 6
[2025-10-12 12:00:35] 2025-10-12 12:00:03,692 | INFO     | aborting job monitoring since job object (job id=6838634830) has expired
[2025-10-12 12:00:35] 2025-10-12 12:00:04,024 | INFO     | --- collectZombieJob: --- 10, [3216962]
[2025-10-12 12:00:35] 2025-10-12 12:00:04,024 | INFO     | zombie collector waiting for pid 3216962
[2025-10-12 12:00:35] 2025-10-12 12:00:04,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:00:35] 2025-10-12 12:00:04,024 | INFO     | collected zombie processes
[2025-10-12 12:00:35] 2025-10-12 12:00:04,024 | INFO     | will attempt to kill all subprocesses of pid=3216962
[2025-10-12 12:00:35] 2025-10-12 12:00:04,828 | INFO     | process IDs to be killed: [3216962] (in reverse order)
[2025-10-12 12:00:35] 2025-10-12 12:00:05,112 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:00:35] 2025-10-12 12:00:05,113 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:00:35] 2025-10-12 12:00:05,140 | INFO     | did not find any defunct processes belonging to 3216962
[2025-10-12 12:00:35] 2025-10-12 12:00:05,167 | INFO     | did not find any defunct processes belonging to 3216962
[2025-10-12 12:00:35] 2025-10-12 12:00:05,167 | INFO     | ready for new job
[2025-10-12 12:00:35] 2025-10-12 12:00:05,168 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:00:35] 2025-10-12 12:00:05,170 | INFO     | ***************************************
[2025-10-12 12:00:35] 2025-10-12 12:00:05,170 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:00:35] 2025-10-12 12:00:05,170 | INFO     | ***************************************
[2025-10-12 12:00:35] 2025-10-12 12:00:05,170 | INFO     | 
[2025-10-12 12:00:35] 2025-10-12 12:00:05,213 | INFO     | architecture information:
[2025-10-12 12:00:35] 2025-10-12 12:00:05,214 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:00:35] 2025-10-12 12:00:05,238 | INFO     | cat /etc/os-release:
[2025-10-12 12:00:35] NAME="CentOS Linux"
[2025-10-12 12:00:35] VERSION="7 (Core)"
[2025-10-12 12:00:35] ID="centos"
[2025-10-12 12:00:35] ID_LIKE="rhel fedora"
[2025-10-12 12:00:35] VERSION_ID="7"
[2025-10-12 12:00:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:00:35] ANSI_COLOR="0;31"
[2025-10-12 12:00:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:00:35] HOME_URL="https://www.centos.org/"
[2025-10-12 12:00:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:00:35] 
[2025-10-12 12:00:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:00:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:00:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:00:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:00:35] 
[2025-10-12 12:00:35] 2025-10-12 12:00:05,239 | INFO     | ***************************************
[2025-10-12 12:00:35] 2025-10-12 12:00:05,742 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-10-12 12:00:35] 2025-10-12 12:00:05,770 | INFO     | sufficient remaining disk space (1724216508416 B)
[2025-10-12 12:00:35] 2025-10-12 12:00:05,770 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:00:35] 2025-10-12 12:00:05,771 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:00:35] 2025-10-12 12:00:05,771 | INFO     | update_server=False
[2025-10-12 12:00:35] 2025-10-12 12:00:05,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:00:35] 2025-10-12 12:00:05,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:00:35] 2025-10-12 12:00:05,858 | INFO     | all data control threads have been joined
[2025-10-12 12:00:35] 2025-10-12 12:00:06,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:00:35] 2025-10-12 12:00:06,196 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 12:00:35] 2025-10-12 12:00:06,196 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 12:00:35] 2025-10-12 12:00:06,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:00:35] 2025-10-12 12:00:06,196 | INFO     | will abort loop
[2025-10-12 12:00:35] 2025-10-12 12:00:06,214 | INFO     | all job control threads have been joined
[2025-10-12 12:00:35] 2025-10-12 12:00:06,774 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:06,862 | INFO     | [data] control thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:06,902 | INFO     | all payload control threads have been joined
[2025-10-12 12:00:35] 2025-10-12 12:00:07,115 | INFO     | [job] validate thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:07,186 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:07,199 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:07,218 | INFO     | [job] control thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:07,330 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:07,374 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:07,402 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:07,477 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:07,906 | INFO     | [payload] control thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:07,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:00:35] 2025-10-12 12:00:08,024 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:08,318 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:08,986 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:09,759 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:00:35] 2025-10-12 12:00:09,774 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:16,318 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:00:35] 2025-10-12 12:00:17,322 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:00:35] 2025-10-12 12:00:18,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139652585490240)>', '<ExcThread(monitor, started 139651926976256)>']
[2025-10-12 12:00:35] 2025-10-12 12:00:23,162 | INFO     | all workflow threads have been joined
[2025-10-12 12:00:35] 2025-10-12 12:00:23,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:00:35] 2025-10-12 12:00:23,163 | INFO     | traces error code: 0
[2025-10-12 12:00:35] 2025-10-12 12:00:23,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:00:35] 2025-10-12 12:00:35,329 | INFO     | PID=3195797 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 12:00:35] 2025-10-12 12:00:35,329 | INFO     | .. there are 17 such processes running
[2025-10-12 12:00:35] 2025-10-12 12:00:35,330 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:00:35] 2025-10-12 12:00:35,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:00:35] 2025-10-12 12:00:35,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:00:35] 2025-10-12 12:00:35,330 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:00:35] 2025-10-12 12:00:35,330 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 12:00:35] 2025-10-12 12:00:35,330 | INFO     | [monitor] control thread has ended
[2025-10-12 12:00:35] 2025-10-12 12:00:35,492 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:00:35] 2025-10-12 12:00:35,497 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:00:35] 2025-10-12 12:00:35,501 [wrapper] pilotpid: 3195797
[2025-10-12 12:00:35] 2025-10-12 12:00:35,504 [wrapper] Pilot exit status: 0
[2025-10-12 12:00:35] 2025-10-12 12:00:35,519 [wrapper] pandaids: 6838634830
[2025-10-12 12:00:35] 2025-10-12 12:00:35,701 [wrapper] cleanup supervisor_pilot 3612391 3195798
[2025-10-12 12:00:35] 2025-10-12 12:00:35,705 [wrapper] Test setup, not cleaning
[2025-10-12 12:00:35] 2025-10-12 12:00:35,708 [wrapper] apfmon messages muted
[2025-10-12 12:00:35] 2025-10-12 12:00:35,713 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:00:35] 2025-10-12 12:00:35,717 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:00:35]  *** Error codes and diagnostics ***
[2025-10-12 12:00:35]     "exeErrorCode": 0,
[2025-10-12 12:00:35]     "exeErrorDiag": "",
[2025-10-12 12:00:35]     "pilotErrorCode": 0,
[2025-10-12 12:00:35]     "pilotErrorDiag": "",
[2025-10-12 12:00:35]  *** Listing of results directory ***
[2025-10-12 12:00:35] total 412256
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:33 pilot3.tar.gz
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:37 queuedata.json
[2025-10-12 12:00:35] -rwx------ 1 boinc boinc     36292 Oct 11 17:39 runpilot2-wrapper.sh
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:00:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:10 run_atlas
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:10 job.xml
[2025-10-12 12:00:35] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:10 start_atlas.sh
[2025-10-12 12:00:35] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:10 shared
[2025-10-12 12:00:35] -rw-r--r-- 2 boinc boinc    569688 Oct 12 11:10 input.tar.gz
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc      9396 Oct 12 11:10 init_data.xml
[2025-10-12 12:00:35] -rw-r--r-- 2 boinc boinc 222122651 Oct 12 11:10 EVNT.46676267._002496.pool.root.1
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:10 boinc_setup_complete
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:10 boinc_lockfile
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc      2550 Oct 12 11:10 pandaJob.out
[2025-10-12 12:00:35] -rw------- 1 boinc boinc    975520 Oct 12 11:11 agis_schedconf.cvmfs.json
[2025-10-12 12:00:35] -rw------- 1 boinc boinc   1560580 Oct 12 11:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:00:35] drwx------ 5 boinc boinc      4096 Oct 12 11:11 pilot3
[2025-10-12 12:00:35] -rw------- 1 boinc boinc 194539324 Oct 12 11:59 HITS.46676269._062125.pool.root.1
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc       529 Oct 12 11:59 boinc_task_state.xml
[2025-10-12 12:00:35] -rw------- 1 boinc boinc      1025 Oct 12 11:59 memory_monitor_summary.json
[2025-10-12 12:00:35] -rw------- 1 boinc boinc    350101 Oct 12 11:59 log.46676269._062125.job.log.tgz.1
[2025-10-12 12:00:35] -rw------- 1 boinc boinc        95 Oct 12 11:59 pilot_heartbeat.json
[2025-10-12 12:00:35] -rw------- 1 boinc boinc      7742 Oct 12 12:00 heartbeat.json
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc      8192 Oct 12 12:00 boinc_mmap_file
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc        27 Oct 12 12:00 wrapper_checkpoint.txt
[2025-10-12 12:00:35] -rw------- 1 boinc boinc       894 Oct 12 12:00 pilotlog.txt
[2025-10-12 12:00:35] -rw------- 1 boinc boinc    440307 Oct 12 12:00 log.46676269._062125.job.log.1
[2025-10-12 12:00:35] -rw------- 1 boinc boinc       357 Oct 12 12:00 output.list
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc       620 Oct 12 12:00 runtime_log
[2025-10-12 12:00:35] -rw------- 1 boinc boinc    808960 Oct 12 12:00 result.tar.gz
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc      8672 Oct 12 12:00 runtime_log.err
[2025-10-12 12:00:35] -rw------- 1 boinc boinc       642 Oct 12 12:00 GjJNDmtjsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme8gNDmMMI4In.diag
[2025-10-12 12:00:35] -rw-r--r-- 1 boinc boinc     22087 Oct 12 12:00 stderr.txt
[2025-10-12 12:00:35] HITS file was successfully produced:
[2025-10-12 12:00:35] -rw------- 1 boinc boinc 194539324 Oct 12 11:59 shared/HITS.pool.root.1
[2025-10-12 12:00:35]  *** Contents of shared directory: ***
[2025-10-12 12:00:35] total 408276
[2025-10-12 12:00:35] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:10 start_atlas.sh
[2025-10-12 12:00:35] -rw-r--r-- 2 boinc boinc    569688 Oct 12 11:10 input.tar.gz
[2025-10-12 12:00:35] -rw-r--r-- 2 boinc boinc 222122651 Oct 12 11:10 ATLAS.root_0
[2025-10-12 12:00:35] -rw------- 1 boinc boinc 194539324 Oct 12 11:59 HITS.pool.root.1
[2025-10-12 12:00:35] -rw------- 1 boinc boinc    808960 Oct 12 12:00 result.tar.gz
12:00:37 (3184908): run_atlas exited; CPU time 31312.625813
12:00:37 (3184908): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN