Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:13:39 (1648068): wrapper (7.7.26015): starting
07:13:39 (1648068): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 07:13:39] Arguments: --nthreads 9
[2025-10-12 07:13:39] Threads: 9
[2025-10-12 07:13:39] Checking for CVMFS
[2025-10-12 07:13:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:13:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:13:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:13:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:13:40] 2.13.2.0 953388 86234 376364 151618 2 442 20069071 32935937 40951 16776704 0 457269861 99.713 325303436 16591 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 07:13:40] CVMFS is ok
[2025-10-12 07:13:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:13:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:13:40] Further information can be found at the LHC@home message board.
[2025-10-12 07:13:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:13:40] Checking for apptainer binary...
[2025-10-12 07:13:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:13:40] Running /usr/bin/apptainer --version
[2025-10-12 07:13:40] apptainer version 1.4.3-1.el9
[2025-10-12 07:13:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:13:40] c7-2-10.aglt2.org
[2025-10-12 07:13:40] apptainer works
[2025-10-12 07:13:40] Set ATHENA_PROC_NUMBER=9
[2025-10-12 07:13:40] Set ATHENA_CORE_NUMBER=9
[2025-10-12 07:13:40] Starting ATLAS job with PandaID=6839317502
[2025-10-12 07:13:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:28:42 (2370108): wrapper (7.7.26015): starting
09:28:42 (2370108): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:28:42] Arguments: --nthreads 8
[2025-10-12 09:28:42] Threads: 8
[2025-10-12 09:28:42] This job has been restarted, cleaning up previous attempt
[2025-10-12 09:28:42] Checking for CVMFS
[2025-10-12 09:28:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:28:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:28:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:28:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:28:43] 2.13.2.0 953388 86369 385064 151621 0 490 24889668 32935936 35732 16776704 0 458295429 99.712 326185824 16576 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 09:28:43] CVMFS is ok
[2025-10-12 09:28:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:28:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:28:43] Further information can be found at the LHC@home message board.
[2025-10-12 09:28:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:28:43] Checking for apptainer binary...
[2025-10-12 09:28:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:28:43] Running /usr/bin/apptainer --version
[2025-10-12 09:28:43] apptainer version 1.4.3-1.el9
[2025-10-12 09:28:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:28:43] c7-2-10.aglt2.org
[2025-10-12 09:28:43] apptainer works
[2025-10-12 09:28:43] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:28:43] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:28:43] Starting ATLAS job with PandaID=6839317502
[2025-10-12 09:28:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:35:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:35:54] 2025-10-12 20:35:18,056 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:35:54] 2025-10-12 20:35:18,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:35:54] 2025-10-12 20:35:18,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:35:54] 2025-10-12 20:35:18,092 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:35:54] 2025-10-12 20:35:18,093 | INFO     | sum of square deviations: 22809576090.22435
[2025-10-12 16:35:54] 2025-10-12 20:35:18,116 | INFO     | sum of deviations: 48515570702.10257
[2025-10-12 16:35:54] 2025-10-12 20:35:18,116 | INFO     | mean x: 1760288526.1527445
[2025-10-12 16:35:54] 2025-10-12 20:35:18,116 | INFO     | mean y: 2430065.3890214795
[2025-10-12 16:35:54] 2025-10-12 20:35:18,116 | INFO     | -- intersect: -3741672942.4377856
[2025-10-12 16:35:54] 2025-10-12 20:35:18,116 | INFO     | intersect: -3741672942.4377856
[2025-10-12 16:35:54] 2025-10-12 20:35:18,117 | INFO     | chi2: 4.172930484694485
[2025-10-12 16:35:54] 2025-10-12 20:35:18,142 | INFO     | sum of square deviations: 22002724667.60627
[2025-10-12 16:35:54] 2025-10-12 20:35:18,167 | INFO     | sum of deviations: 126479623016.16423
[2025-10-12 16:35:54] 2025-10-12 20:35:18,167 | INFO     | mean x: 1760288373.6545894
[2025-10-12 16:35:54] 2025-10-12 20:35:18,167 | INFO     | mean y: 2444728.966183575
[2025-10-12 16:35:54] 2025-10-12 20:35:18,167 | INFO     | -- intersect: -10116329798.415607
[2025-10-12 16:35:54] 2025-10-12 20:35:18,167 | INFO     | intersect: -10116329798.415607
[2025-10-12 16:35:54] 2025-10-12 20:35:18,168 | INFO     | chi2: 2.000280459254262
[2025-10-12 16:35:54] 2025-10-12 20:35:18,168 | INFO     | current chi2=2.000280459254262 (change=52.06532994999773 %)
[2025-10-12 16:35:54] 2025-10-12 20:35:18,168 | INFO     | sum of square deviations: 21215104165.29597
[2025-10-12 16:35:54] 2025-10-12 20:35:18,185 | INFO     | sum of deviations: 124577489848.79219
[2025-10-12 16:35:54] 2025-10-12 20:35:18,186 | INFO     | mean x: 1760288221.1540341
[2025-10-12 16:35:54] 2025-10-12 20:35:18,186 | INFO     | mean y: 2444360.701711491
[2025-10-12 16:35:54] 2025-10-12 20:35:18,186 | INFO     | -- intersect: -10334167059.78272
[2025-10-12 16:35:54] 2025-10-12 20:35:18,186 | INFO     | intersect: -10334167059.78272
[2025-10-12 16:35:54] 2025-10-12 20:35:18,186 | INFO     | chi2: 2.0003565909315686
[2025-10-12 16:35:54] 2025-10-12 20:35:18,186 | INFO     | current chi2=2.0003565909315686 (change=-0.0038060501443474685 %)
[2025-10-12 16:35:54] 2025-10-12 20:35:18,186 | INFO     | right removable region: 408
[2025-10-12 16:35:54] 2025-10-12 20:35:18,187 | INFO     | sum of square deviations: 22002685627.60627
[2025-10-12 16:35:54] 2025-10-12 20:35:18,211 | INFO     | sum of deviations: -37070019256.29712
[2025-10-12 16:35:54] 2025-10-12 20:35:18,212 | INFO     | mean x: 1760288678.6545894
[2025-10-12 16:35:54] 2025-10-12 20:35:18,212 | INFO     | mean y: 2446187.34057971
[2025-10-12 16:35:54] 2025-10-12 20:35:18,212 | INFO     | -- intersect: 2968172113.6563563
[2025-10-12 16:35:54] 2025-10-12 20:35:18,212 | INFO     | intersect: 2968172113.6563563
[2025-10-12 16:35:54] 2025-10-12 20:35:18,212 | INFO     | chi2: 2.272321125894536
[2025-10-12 16:35:54] 2025-10-12 20:35:18,212 | INFO     | current chi2=2.272321125894536 (change=45.54615433377149 %)
[2025-10-12 16:35:54] 2025-10-12 20:35:18,213 | INFO     | sum of square deviations: 21215051339.985367
[2025-10-12 16:35:54] 2025-10-12 20:35:18,232 | INFO     | sum of deviations: -50170530072.95354
[2025-10-12 16:35:54] 2025-10-12 20:35:18,238 | INFO     | mean x: 1760288831.1564791
[2025-10-12 16:35:54] 2025-10-12 20:35:18,238 | INFO     | mean y: 2448710.1711491444
[2025-10-12 16:35:54] 2025-10-12 20:35:18,239 | INFO     | -- intersect: 4165277370.1314545
[2025-10-12 16:35:54] 2025-10-12 20:35:18,239 | INFO     | intersect: 4165277370.1314545
[2025-10-12 16:35:54] 2025-10-12 20:35:18,239 | INFO     | chi2: 2.2128589668214604
[2025-10-12 16:35:54] 2025-10-12 20:35:18,239 | INFO     | current chi2=2.2128589668214604 (change=2.616802633900051 %)
[2025-10-12 16:35:54] 2025-10-12 20:35:18,239 | INFO     | left removable region: 20
[2025-10-12 16:35:54] 2025-10-12 20:35:18,240 | INFO     | sum of square deviations: 18112078449.409855
[2025-10-12 16:35:54] 2025-10-12 20:35:18,259 | INFO     | sum of deviations: 25080822887.768044
[2025-10-12 16:35:54] 2025-10-12 20:35:18,260 | INFO     | mean x: 1760288800.6572165
[2025-10-12 16:35:54] 2025-10-12 20:35:18,260 | INFO     | mean y: 2464041.118556701
[2025-10-12 16:35:54] 2025-10-12 20:35:18,260 | INFO     | -- intersect: -2435107757.3871965
[2025-10-12 16:35:54] 2025-10-12 20:35:18,260 | INFO     | intersect: -2435107757.3871965
[2025-10-12 16:35:54] 2025-10-12 20:35:18,261 | INFO     | chi2: 0.005816410383153407
[2025-10-12 16:35:54] 2025-10-12 20:35:18,261 | INFO     | -- intersect: -2435107757.3871965
[2025-10-12 16:35:54] 2025-10-12 20:35:18,261 | INFO     | current memory leak: 1.38 B/s (using 388 data points, chi2=0.01)
[2025-10-12 16:35:54] 2025-10-12 20:35:18,261 | INFO     | could have reported an average CPU frequency of 3206 MHz (18 samples)
[2025-10-12 16:35:54] 2025-10-12 20:35:18,262 | INFO     | ..............................
[2025-10-12 16:35:54] 2025-10-12 20:35:18,262 | INFO     | . Timing measurements:
[2025-10-12 16:35:54] 2025-10-12 20:35:18,262 | INFO     | . get job = 0 s
[2025-10-12 16:35:54] 2025-10-12 20:35:18,262 | INFO     | . initial setup = 1 s
[2025-10-12 16:35:54] 2025-10-12 20:35:18,262 | INFO     | . payload setup = 10 s
[2025-10-12 16:35:54] 2025-10-12 20:35:18,262 | INFO     | . stage-in = 0 s
[2025-10-12 16:35:54] 2025-10-12 20:35:18,262 | INFO     | . payload execution = 25519 s
[2025-10-12 16:35:54] 2025-10-12 20:35:18,262 | INFO     | . stage-out = 13 s
[2025-10-12 16:35:54] 2025-10-12 20:35:18,262 | INFO     | . log creation = 0 s
[2025-10-12 16:35:54] 2025-10-12 20:35:18,262 | INFO     | ..............................
[2025-10-12 16:35:54] 2025-10-12 20:35:18,518 | INFO     | 
[2025-10-12 16:35:54] 2025-10-12 20:35:18,518 | INFO     | job summary report
[2025-10-12 16:35:54] 2025-10-12 20:35:18,518 | INFO     | --------------------------------------------------
[2025-10-12 16:35:54] 2025-10-12 20:35:18,522 | INFO     | PanDA job id: 6839317502
[2025-10-12 16:35:54] 2025-10-12 20:35:18,522 | INFO     | task id: 46676269
[2025-10-12 16:35:54] 2025-10-12 20:35:18,522 | INFO     | errors: (none)
[2025-10-12 16:35:54] 2025-10-12 20:35:18,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:35:54] 2025-10-12 20:35:18,522 | INFO     | pilot state: finished 
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | transexitcode: 0
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | exeerrorcode: 0
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | exeerrordiag: 
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | exitcode: 0
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | exitmsg: OK
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | cpuconsumptiontime: 34397 s
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | nevents: 400
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | neventsw: 0
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | pid: 2434409
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | pgrp: 2434409
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | corecount: 8
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | event service: False
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | sizes: {0: 2348028, 1: 2348884, 8: 2349146, 12: 2349174, 25533: 2385146, 25534: 2385145, 25549: 2394585, 25550: 2394641, 25561: 2394665}
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | --------------------------------------------------
[2025-10-12 16:35:54] 2025-10-12 20:35:18,523 | INFO     | 
[2025-10-12 16:35:54] 2025-10-12 20:35:18,524 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 16:35:54] 2025-10-12 20:35:18,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,570 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:35:54] 2025-10-12 20:35:18,571 | INFO     | job 6839317502 has completed (purged errors)
[2025-10-12 16:35:54] 2025-10-12 20:35:18,572 | INFO     | overall cleanup function is called
[2025-10-12 16:35:54] 2025-10-12 20:35:19,586 | INFO     | --- collectZombieJob: --- 10, [2434409]
[2025-10-12 16:35:54] 2025-10-12 20:35:19,587 | INFO     | zombie collector waiting for pid 2434409
[2025-10-12 16:35:54] 2025-10-12 20:35:19,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:35:54] 2025-10-12 20:35:19,587 | INFO     | collected zombie processes
[2025-10-12 16:35:54] 2025-10-12 20:35:19,587 | INFO     | will attempt to kill all subprocesses of pid=2434409
[2025-10-12 16:35:54] 2025-10-12 20:35:22,236 | INFO     | process IDs to be killed: [2434409] (in reverse order)
[2025-10-12 16:35:54] 2025-10-12 20:35:22,443 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:35:54] 2025-10-12 20:35:22,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:35:54] 2025-10-12 20:35:22,467 | INFO     | did not find any defunct processes belonging to 2434409
[2025-10-12 16:35:54] 2025-10-12 20:35:22,490 | INFO     | did not find any defunct processes belonging to 2434409
[2025-10-12 16:35:54] 2025-10-12 20:35:22,490 | INFO     | ready for new job
[2025-10-12 16:35:54] 2025-10-12 20:35:22,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:35:54] 2025-10-12 20:35:22,495 | INFO     | ***************************************
[2025-10-12 16:35:54] 2025-10-12 20:35:22,496 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:35:54] 2025-10-12 20:35:22,496 | INFO     | ***************************************
[2025-10-12 16:35:54] 2025-10-12 20:35:22,496 | INFO     | 
[2025-10-12 16:35:54] 2025-10-12 20:35:22,544 | INFO     | architecture information:
[2025-10-12 16:35:54] 2025-10-12 20:35:22,569 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:35:54] 2025-10-12 20:35:22,704 | INFO     | cat /etc/os-release:
[2025-10-12 16:35:54] NAME="CentOS Linux"
[2025-10-12 16:35:54] VERSION="7 (Core)"
[2025-10-12 16:35:54] ID="centos"
[2025-10-12 16:35:54] ID_LIKE="rhel fedora"
[2025-10-12 16:35:54] VERSION_ID="7"
[2025-10-12 16:35:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:35:54] ANSI_COLOR="0;31"
[2025-10-12 16:35:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:35:54] HOME_URL="https://www.centos.org/"
[2025-10-12 16:35:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:35:54] 
[2025-10-12 16:35:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:35:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:35:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:35:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:35:54] 
[2025-10-12 16:35:54] 2025-10-12 20:35:22,705 | INFO     | ***************************************
[2025-10-12 16:35:54] 2025-10-12 20:35:23,208 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:35:54] 2025-10-12 20:35:23,249 | INFO     | sufficient remaining disk space (73627860992 B)
[2025-10-12 16:35:54] 2025-10-12 20:35:23,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:35:54] 2025-10-12 20:35:23,250 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:35:54] 2025-10-12 20:35:23,251 | INFO     | update_server=False
[2025-10-12 16:35:54] 2025-10-12 20:35:23,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:35:54] 2025-10-12 20:35:23,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:35:54] 2025-10-12 20:35:23,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:35:54] 2025-10-12 20:35:23,251 | INFO     | aborting loop
[2025-10-12 16:35:54] 2025-10-12 20:35:23,275 | INFO     | all data control threads have been joined
[2025-10-12 16:35:54] 2025-10-12 20:35:23,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:35:54] 2025-10-12 20:35:23,980 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:35:54] 2025-10-12 20:35:24,256 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:24,257 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:24,282 | INFO     | [data] control thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:24,434 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:24,542 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:24,620 | INFO     | all payload control threads have been joined
[2025-10-12 16:35:54] 2025-10-12 20:35:24,765 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:24,824 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:24,879 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:24,918 | INFO     | all job control threads have been joined
[2025-10-12 16:35:54] 2025-10-12 20:35:24,944 | INFO     | [job] validate thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:25,385 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:25,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:25,625 | INFO     | [payload] control thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:25,862 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:25,934 | INFO     | [job] control thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:25,988 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:27,272 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:35:54] 2025-10-12 20:35:43,714 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:35:54] 2025-10-12 20:35:45,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043303855936)>', '<ExcThread(monitor, started 140042810930944)>']
[2025-10-12 16:35:54] 2025-10-12 20:35:50,444 | INFO     | all workflow threads have been joined
[2025-10-12 16:35:54] 2025-10-12 20:35:50,444 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:35:54] 2025-10-12 20:35:50,445 | INFO     | traces error code: 0
[2025-10-12 16:35:54] 2025-10-12 20:35:50,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:35:54] 2025-10-12 20:35:53,865 | INFO     | PID=2392802 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:35:54] 2025-10-12 20:35:53,865 | INFO     | .. there are 49 such processes running
[2025-10-12 16:35:54] 2025-10-12 20:35:53,866 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:35:54] 2025-10-12 20:35:53,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:35:54] 2025-10-12 20:35:53,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:35:54] 2025-10-12 20:35:53,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:35:54] 2025-10-12 20:35:53,866 | INFO     | [monitor] control thread has ended
[2025-10-12 16:35:54] 2025-10-12 20:35:54,465 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:35:54] 2025-10-12 20:35:54,470 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:35:54] 2025-10-12 20:35:54,473 [wrapper] pilotpid: 2392802
[2025-10-12 16:35:54] 2025-10-12 20:35:54,476 [wrapper] Pilot exit status: 0
[2025-10-12 16:35:54] 2025-10-12 20:35:54,490 [wrapper] pandaids: 6839317502 6839317502
[2025-10-12 16:35:54] 2025-10-12 20:35:54,614 [wrapper] cleanup supervisor_pilot  457712 2392803
[2025-10-12 16:35:54] 2025-10-12 20:35:54,617 [wrapper] Test setup, not cleaning
[2025-10-12 16:35:54] 2025-10-12 20:35:54,624 [wrapper] apfmon messages muted
[2025-10-12 16:35:54] 2025-10-12 20:35:54,627 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:35:54] 2025-10-12 20:35:54,631 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:35:54]  *** Error codes and diagnostics ***
[2025-10-12 16:35:54]     "exeErrorCode": 0,
[2025-10-12 16:35:54]     "exeErrorDiag": "",
[2025-10-12 16:35:54]     "pilotErrorCode": 0,
[2025-10-12 16:35:54]     "pilotErrorDiag": "",
[2025-10-12 16:35:54]  *** Listing of results directory ***
[2025-10-12 16:35:54] total 633396
[2025-10-12 16:35:54] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 22:49 pilot3.tar.gz
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 22:53 queuedata.json
[2025-10-12 16:35:54] -rwx------. 1 boincer umatlas     36292 Oct 11 22:55 runpilot2-wrapper.sh
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas       100 Oct 12 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:35:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 07:13 run_atlas
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas       105 Oct 12 07:13 job.xml
[2025-10-12 16:35:54] -rw-r--r--. 3 boincer umatlas 224212955 Oct 12 07:13 EVNT.46676267._003191.pool.root.1
[2025-10-12 16:35:54] -rw-r--r--. 3 boincer umatlas 224212955 Oct 12 07:13 ATLAS.root_0
[2025-10-12 16:35:54] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 07:13 input.tar.gz
[2025-10-12 16:35:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:13 start_atlas.sh
[2025-10-12 16:35:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 07:13 shared
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas         0 Oct 12 07:13 boinc_lockfile
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 09:28 pandaJob.out
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas    975528 Oct 12 09:28 agis_schedconf.cvmfs.json
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas      6935 Oct 12 16:28 init_data.xml
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas 188687634 Oct 12 16:31 HITS.46676269._069541.pool.root.1
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas       530 Oct 12 16:31 boinc_task_state.xml
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas      1047 Oct 12 16:34 memory_monitor_summary.json
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas    595589 Oct 12 16:35 log.46676269._069541.job.log.tgz.1
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas        96 Oct 12 16:35 pilot_heartbeat.json
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas      7801 Oct 12 16:35 heartbeat.json
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:35 boinc_mmap_file
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas       823 Oct 12 16:35 pilotlog.txt
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:35 wrapper_checkpoint.txt
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas   3195133 Oct 12 16:35 log.46676269._069541.job.log.1
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas       357 Oct 12 16:35 output.list
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:35 runtime_log
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas   3809280 Oct 12 16:35 result.tar.gz
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas      8784 Oct 12 16:35 runtime_log.err
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas       786 Oct 12 16:35 Kz9NDm0P1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGOiNDmZaQf8m.diag
[2025-10-12 16:35:54] -rw-r--r--. 1 boincer umatlas     23178 Oct 12 16:35 stderr.txt
[2025-10-12 16:35:54] HITS file was successfully produced:
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas 188687634 Oct 12 16:31 shared/HITS.pool.root.1
[2025-10-12 16:35:54]  *** Contents of shared directory: ***
[2025-10-12 16:35:54] total 407528
[2025-10-12 16:35:54] -rw-r--r--. 3 boincer umatlas 224212955 Oct 12 07:13 ATLAS.root_0
[2025-10-12 16:35:54] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 07:13 input.tar.gz
[2025-10-12 16:35:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:13 start_atlas.sh
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas 188687634 Oct 12 16:31 HITS.pool.root.1
[2025-10-12 16:35:54] -rw-------. 1 boincer umatlas   3809280 Oct 12 16:35 result.tar.gz
16:35:55 (2370108): run_atlas exited; CPU time 35543.968581
16:35:55 (2370108): called boinc_finish(0)

</stderr_txt>
]]>

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