Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:47:54 (3621296): wrapper (7.7.26015): starting
06:47:54 (3621296): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 06:47:55] Arguments: --nthreads 8
[2025-10-12 06:47:55] Threads: 8
[2025-10-12 06:47:55] Checking for CVMFS
[2025-10-12 06:47:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:47:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:47:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:47:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:47:56] 2.13.2.0 6179 5579 132484 151617 1 674 37548808 40960001 21161 16776704 0 14846459 99.943 1620567 31049 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 06:47:56] CVMFS is ok
[2025-10-12 06:47:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:47:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:47:56] Further information can be found at the LHC@home message board.
[2025-10-12 06:47:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:47:56] Checking for apptainer binary...
[2025-10-12 06:47:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:47:56] Running /usr/bin/apptainer --version
[2025-10-12 06:47:56] apptainer version 1.4.3-1.el9
[2025-10-12 06:47:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:47:57] c-211-33-2.aglt2.org
[2025-10-12 06:47:57] apptainer works
[2025-10-12 06:47:57] Set ATHENA_PROC_NUMBER=8
[2025-10-12 06:47:57] Set ATHENA_CORE_NUMBER=8
[2025-10-12 06:47:57] Starting ATLAS job with PandaID=6839319461
[2025-10-12 06:47:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:24:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:24:14] 2025-10-12 15:23:29,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:24:14] 2025-10-12 15:23:29,799 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:24:14] 2025-10-12 15:23:29,804 | INFO     | sum of square deviations: 6035672437.04088
[2025-10-12 11:24:14] 2025-10-12 15:23:29,811 | INFO     | sum of deviations: 105709503869.70628
[2025-10-12 11:24:14] 2025-10-12 15:23:29,811 | INFO     | mean x: 1760274396.5278811
[2025-10-12 11:24:14] 2025-10-12 15:23:29,811 | INFO     | mean y: 2427018.572490706
[2025-10-12 11:24:14] 2025-10-12 15:23:29,811 | INFO     | -- intersect: -30827233648.48942
[2025-10-12 11:24:14] 2025-10-12 15:23:29,811 | INFO     | intersect: -30827233648.48942
[2025-10-12 11:24:14] 2025-10-12 15:23:29,812 | INFO     | chi2: 4.828979801090091
[2025-10-12 11:24:14] 2025-10-12 15:23:29,812 | INFO     | sum of square deviations: 5705332913.757604
[2025-10-12 11:24:14] 2025-10-12 15:23:29,816 | INFO     | sum of deviations: 138854417654.212
[2025-10-12 11:24:14] 2025-10-12 15:23:29,816 | INFO     | mean x: 1760274244.030303
[2025-10-12 11:24:14] 2025-10-12 15:23:29,816 | INFO     | mean y: 2442138.9734848486
[2025-10-12 11:24:14] 2025-10-12 15:23:29,816 | INFO     | -- intersect: -42838503124.21129
[2025-10-12 11:24:14] 2025-10-12 15:23:29,816 | INFO     | intersect: -42838503124.21129
[2025-10-12 11:24:14] 2025-10-12 15:23:29,817 | INFO     | chi2: 3.2767913060581866
[2025-10-12 11:24:14] 2025-10-12 15:23:29,817 | INFO     | current chi2=3.2767913060581866 (change=32.14319709271747 %)
[2025-10-12 11:24:14] 2025-10-12 15:23:29,817 | INFO     | sum of square deviations: 5387272324.471019
[2025-10-12 11:24:14] 2025-10-12 15:23:29,820 | INFO     | sum of deviations: 136038197228.88025
[2025-10-12 11:24:14] 2025-10-12 15:23:29,820 | INFO     | mean x: 1760274091.5328186
[2025-10-12 11:24:14] 2025-10-12 15:23:29,820 | INFO     | mean y: 2440788.602316602
[2025-10-12 11:24:14] 2025-10-12 15:23:29,820 | INFO     | -- intersect: -44447607328.158295
[2025-10-12 11:24:14] 2025-10-12 15:23:29,820 | INFO     | intersect: -44447607328.158295
[2025-10-12 11:24:14] 2025-10-12 15:23:29,820 | INFO     | chi2: 3.272900650922638
[2025-10-12 11:24:14] 2025-10-12 15:23:29,821 | INFO     | current chi2=3.272900650922638 (change=0.11873368707843981 %)
[2025-10-12 11:24:14] 2025-10-12 15:23:29,821 | INFO     | right removable region: 258
[2025-10-12 11:24:14] 2025-10-12 15:23:29,821 | INFO     | sum of square deviations: 5705278745.621213
[2025-10-12 11:24:14] 2025-10-12 15:23:29,823 | INFO     | sum of deviations: 35207799825.32576
[2025-10-12 11:24:14] 2025-10-12 15:23:29,824 | INFO     | mean x: 1760274549.0378788
[2025-10-12 11:24:14] 2025-10-12 15:23:29,824 | INFO     | mean y: 2459491.867424242
[2025-10-12 11:24:14] 2025-10-12 15:23:29,824 | INFO     | -- intersect: -10860356633.936625
[2025-10-12 11:24:14] 2025-10-12 15:23:29,824 | INFO     | intersect: -10860356633.936625
[2025-10-12 11:24:14] 2025-10-12 15:23:29,824 | INFO     | chi2: 2.17702631337061
[2025-10-12 11:24:14] 2025-10-12 15:23:29,824 | INFO     | current chi2=2.17702631337061 (change=54.91746905051933 %)
[2025-10-12 11:24:14] 2025-10-12 15:23:29,826 | INFO     | sum of square deviations: 5387180336.239426
[2025-10-12 11:24:14] 2025-10-12 15:23:29,828 | INFO     | sum of deviations: 7454767700.702719
[2025-10-12 11:24:14] 2025-10-12 15:23:29,828 | INFO     | mean x: 1760274701.5444016
[2025-10-12 11:24:14] 2025-10-12 15:23:29,829 | INFO     | mean y: 2472783.243243243
[2025-10-12 11:24:14] 2025-10-12 15:23:29,829 | INFO     | -- intersect: -2433391281.1473637
[2025-10-12 11:24:14] 2025-10-12 15:23:29,829 | INFO     | intersect: -2433391281.1473637
[2025-10-12 11:24:14] 2025-10-12 15:23:29,829 | INFO     | chi2: 1.811822711475394
[2025-10-12 11:24:14] 2025-10-12 15:23:29,829 | INFO     | current chi2=1.811822711475394 (change=16.77534165077613 %)
[2025-10-12 11:24:14] 2025-10-12 15:23:29,829 | INFO     | left removable region: 20
[2025-10-12 11:24:14] 2025-10-12 15:23:29,830 | INFO     | sum of square deviations: 4180222037.731078
[2025-10-12 11:24:14] 2025-10-12 15:23:29,832 | INFO     | sum of deviations: 12817075978.563019
[2025-10-12 11:24:14] 2025-10-12 15:23:29,832 | INFO     | mean x: 1760274671.0336134
[2025-10-12 11:24:14] 2025-10-12 15:23:29,832 | INFO     | mean y: 2503919.0546218487
[2025-10-12 11:24:14] 2025-10-12 15:23:29,832 | INFO     | -- intersect: -5394715175.561633
[2025-10-12 11:24:14] 2025-10-12 15:23:29,832 | INFO     | intersect: -5394715175.561633
[2025-10-12 11:24:14] 2025-10-12 15:23:29,832 | INFO     | chi2: 0.016215258835438735
[2025-10-12 11:24:14] 2025-10-12 15:23:29,833 | INFO     | -- intersect: -5394715175.561633
[2025-10-12 11:24:14] 2025-10-12 15:23:29,833 | INFO     | current memory leak: 3.07 B/s (using 238 data points, chi2=0.02)
[2025-10-12 11:24:14] 2025-10-12 15:23:29,834 | INFO     | could have reported an average CPU frequency of 2583 MHz (12 samples)
[2025-10-12 11:24:14] 2025-10-12 15:23:29,835 | INFO     | ..............................
[2025-10-12 11:24:14] 2025-10-12 15:23:29,835 | INFO     | . Timing measurements:
[2025-10-12 11:24:14] 2025-10-12 15:23:29,835 | INFO     | . get job = 0 s
[2025-10-12 11:24:14] 2025-10-12 15:23:29,835 | INFO     | . initial setup = 3 s
[2025-10-12 11:24:14] 2025-10-12 15:23:29,835 | INFO     | . payload setup = 27 s
[2025-10-12 11:24:14] 2025-10-12 15:23:29,835 | INFO     | . stage-in = 0 s
[2025-10-12 11:24:14] 2025-10-12 15:23:29,835 | INFO     | . payload execution = 16373 s
[2025-10-12 11:24:14] 2025-10-12 15:23:29,835 | INFO     | . stage-out = 4 s
[2025-10-12 11:24:14] 2025-10-12 15:23:29,835 | INFO     | . log creation = 0 s
[2025-10-12 11:24:14] 2025-10-12 15:23:29,835 | INFO     | ..............................
[2025-10-12 11:24:14] 2025-10-12 15:23:29,957 | INFO     | 
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | job summary report
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | --------------------------------------------------
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | PanDA job id: 6839319461
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | task id: 46676269
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | errors: (none)
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | pilot state: finished 
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | transexitcode: 0
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | exeerrorcode: 0
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | exeerrordiag: 
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | exitcode: 0
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | exitmsg: OK
[2025-10-12 11:24:14] 2025-10-12 15:23:29,958 | INFO     | cpuconsumptiontime: 50216 s
[2025-10-12 11:24:14] 2025-10-12 15:23:29,959 | INFO     | nevents: 400
[2025-10-12 11:24:14] 2025-10-12 15:23:29,959 | INFO     | neventsw: 0
[2025-10-12 11:24:14] 2025-10-12 15:23:29,959 | INFO     | pid: 3646972
[2025-10-12 11:24:14] 2025-10-12 15:23:29,960 | INFO     | pgrp: 3646972
[2025-10-12 11:24:14] 2025-10-12 15:23:29,960 | INFO     | corecount: 8
[2025-10-12 11:24:14] 2025-10-12 15:23:29,960 | INFO     | event service: False
[2025-10-12 11:24:14] 2025-10-12 15:23:29,960 | INFO     | sizes: {0: 2348028, 1: 2348713, 2: 2348912, 12: 2348912, 23: 2348940, 24: 2349230, 34: 2349386, 16404: 2380737, 16405: 2380736, 16409: 2389790, 16411: 2389846, 164
[2025-10-12 11:24:14] 2025-10-12 15:23:29,960 | INFO     | --------------------------------------------------
[2025-10-12 11:24:14] 2025-10-12 15:23:29,960 | INFO     | 
[2025-10-12 11:24:14] 2025-10-12 15:23:29,960 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 11:24:14] 2025-10-12 15:23:30,179 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,180 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:24:14] 2025-10-12 15:23:30,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,187 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:24:14] 2025-10-12 15:23:30,187 | INFO     | job 6839319461 has completed (purged errors)
[2025-10-12 11:24:14] 2025-10-12 15:23:30,187 | INFO     | overall cleanup function is called
[2025-10-12 11:24:14] 2025-10-12 15:23:31,213 | INFO     | --- collectZombieJob: --- 10, [3646972]
[2025-10-12 11:24:14] 2025-10-12 15:23:31,213 | INFO     | zombie collector waiting for pid 3646972
[2025-10-12 11:24:14] 2025-10-12 15:23:31,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:24:14] 2025-10-12 15:23:31,214 | INFO     | collected zombie processes
[2025-10-12 11:24:14] 2025-10-12 15:23:31,214 | INFO     | will attempt to kill all subprocesses of pid=3646972
[2025-10-12 11:24:14] 2025-10-12 15:23:32,629 | INFO     | process IDs to be killed: [3646972] (in reverse order)
[2025-10-12 11:24:14] 2025-10-12 15:23:32,811 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:24:14] 2025-10-12 15:23:32,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:24:14] 2025-10-12 15:23:32,827 | INFO     | did not find any defunct processes belonging to 3646972
[2025-10-12 11:24:14] 2025-10-12 15:23:32,842 | INFO     | did not find any defunct processes belonging to 3646972
[2025-10-12 11:24:14] 2025-10-12 15:23:32,842 | INFO     | ready for new job
[2025-10-12 11:24:14] 2025-10-12 15:23:32,842 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:24:14] 2025-10-12 15:23:32,845 | INFO     | ***************************************
[2025-10-12 11:24:14] 2025-10-12 15:23:32,845 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:24:14] 2025-10-12 15:23:32,845 | INFO     | ***************************************
[2025-10-12 11:24:14] 2025-10-12 15:23:32,845 | INFO     | 
[2025-10-12 11:24:14] 2025-10-12 15:23:32,851 | INFO     | architecture information:
[2025-10-12 11:24:14] 2025-10-12 15:23:32,851 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:24:14] 2025-10-12 15:23:32,901 | INFO     | cat /etc/os-release:
[2025-10-12 11:24:14] NAME="CentOS Linux"
[2025-10-12 11:24:14] VERSION="7 (Core)"
[2025-10-12 11:24:14] ID="centos"
[2025-10-12 11:24:14] ID_LIKE="rhel fedora"
[2025-10-12 11:24:14] VERSION_ID="7"
[2025-10-12 11:24:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:24:14] ANSI_COLOR="0;31"
[2025-10-12 11:24:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:24:14] HOME_URL="https://www.centos.org/"
[2025-10-12 11:24:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:24:14] 
[2025-10-12 11:24:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:24:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:24:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:24:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:24:14] 
[2025-10-12 11:24:14] 2025-10-12 15:23:32,902 | INFO     | ***************************************
[2025-10-12 11:24:14] 2025-10-12 15:23:33,405 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 11:24:14] 2025-10-12 15:23:33,494 | INFO     | sufficient remaining disk space (127630573568 B)
[2025-10-12 11:24:14] 2025-10-12 15:23:33,495 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:24:14] 2025-10-12 15:23:33,495 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:24:14] 2025-10-12 15:23:33,495 | INFO     | update_server=False
[2025-10-12 11:24:14] 2025-10-12 15:23:33,495 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:24:14] 2025-10-12 15:23:33,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:24:14] 2025-10-12 15:23:33,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:24:14] 2025-10-12 15:23:33,800 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 11:24:14] 2025-10-12 15:23:33,823 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 11:24:14] 2025-10-12 15:23:33,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:24:14] 2025-10-12 15:23:33,823 | INFO     | will abort loop
[2025-10-12 11:24:14] 2025-10-12 15:23:33,946 | INFO     | all job control threads have been joined
[2025-10-12 11:24:14] 2025-10-12 15:23:34,499 | INFO     | all payload control threads have been joined
[2025-10-12 11:24:14] 2025-10-12 15:23:34,501 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:34,553 | INFO     | all data control threads have been joined
[2025-10-12 11:24:14] 2025-10-12 15:23:34,791 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:34,834 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:34,952 | INFO     | [job] control thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:34,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:24:14] 2025-10-12 15:23:35,001 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:35,137 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:35,508 | INFO     | [payload] control thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:35,510 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:35,559 | INFO     | [data] control thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:35,632 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:35,797 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:35,817 | INFO     | [job] validate thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:35,887 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:35,936 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:35,982 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:23:37,505 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:24:14] 2025-10-12 15:24:02,451 | INFO     | PID=3629704 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:24:14] 2025-10-12 15:24:02,452 | INFO     | .. there are 17 such processes running
[2025-10-12 11:24:14] 2025-10-12 15:24:02,452 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:24:14] 2025-10-12 15:24:02,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:24:14] 2025-10-12 15:24:02,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:24:14] 2025-10-12 15:24:05,445 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:24:14] 2025-10-12 15:24:07,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728454551360)>', '<ExcThread(monitor, started 139727801923328)>']
[2025-10-12 11:24:14] 2025-10-12 15:24:07,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:24:14] 2025-10-12 15:24:07,484 | INFO     | [monitor] control thread has ended
[2025-10-12 11:24:14] 2025-10-12 15:24:12,442 | INFO     | all workflow threads have been joined
[2025-10-12 11:24:14] 2025-10-12 15:24:12,442 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:24:14] 2025-10-12 15:24:12,443 | INFO     | traces error code: 0
[2025-10-12 11:24:14] 2025-10-12 15:24:12,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:24:14] 2025-10-12 15:24:12,857 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:24:14] 2025-10-12 15:24:12,911 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:24:14] 2025-10-12 15:24:12,934 [wrapper] pilotpid: 3629704
[2025-10-12 11:24:14] 2025-10-12 15:24:12,975 [wrapper] Pilot exit status: 0
[2025-10-12 11:24:14] 2025-10-12 15:24:13,177 [wrapper] pandaids: 6839319461
[2025-10-12 11:24:14] 2025-10-12 15:24:13,307 [wrapper] cleanup supervisor_pilot 4149320 3629705
[2025-10-12 11:24:14] 2025-10-12 15:24:13,325 [wrapper] Test setup, not cleaning
[2025-10-12 11:24:14] 2025-10-12 15:24:13,333 [wrapper] apfmon messages muted
[2025-10-12 11:24:14] 2025-10-12 15:24:13,352 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:24:14] 2025-10-12 15:24:13,382 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:24:14]  *** Error codes and diagnostics ***
[2025-10-12 11:24:14]     "exeErrorCode": 0,
[2025-10-12 11:24:14]     "exeErrorDiag": "",
[2025-10-12 11:24:14]     "pilotErrorCode": 0,
[2025-10-12 11:24:14]     "pilotErrorDiag": "",
[2025-10-12 11:24:14]  *** Listing of results directory ***
[2025-10-12 11:24:14] total 415252
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 23:35 pilot3.tar.gz
[2025-10-12 11:24:14] -rwx------. 1 boincer umatlas     36292 Oct 11 23:44 runpilot2-wrapper.sh
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 23:44 queuedata.json
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas       100 Oct 12 06:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:24:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 06:47 run_atlas
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas       105 Oct 12 06:47 job.xml
[2025-10-12 11:24:14] -rw-r--r--. 2 boincer umatlas 221964470 Oct 12 06:47 EVNT.46676267._003221.pool.root.1
[2025-10-12 11:24:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:47 start_atlas.sh
[2025-10-12 11:24:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 06:47 shared
[2025-10-12 11:24:14] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 06:47 input.tar.gz
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas         0 Oct 12 06:47 boinc_lockfile
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 06:47 pandaJob.out
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas    975520 Oct 12 06:48 agis_schedconf.cvmfs.json
[2025-10-12 11:24:14] drwx------. 5 boincer umatlas      4096 Oct 12 06:48 pilot3
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas 194224616 Oct 12 11:21 HITS.46676269._070163.pool.root.1
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas       531 Oct 12 11:21 boinc_task_state.xml
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas      6861 Oct 12 11:22 init_data.xml
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas      1046 Oct 12 11:22 memory_monitor_summary.json
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas   1560580 Oct 12 11:22 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas    480017 Oct 12 11:23 log.46676269._070163.job.log.tgz.1
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas        95 Oct 12 11:23 pilot_heartbeat.json
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas      7830 Oct 12 11:23 heartbeat.json
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:24 boinc_mmap_file
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas        28 Oct 12 11:24 wrapper_checkpoint.txt
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas      5011 Oct 12 11:24 pilotlog.txt
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas   2078731 Oct 12 11:24 log.46676269._070163.job.log.1
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas       357 Oct 12 11:24 output.list
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:24 runtime_log
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas   2580480 Oct 12 11:24 result.tar.gz
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 11:24 runtime_log.err
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas       657 Oct 12 11:24 knIODmPB2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNUiNDmFq8qSn.diag
[2025-10-12 11:24:14] -rw-r--r--. 1 boincer umatlas     21051 Oct 12 11:24 stderr.txt
[2025-10-12 11:24:14] HITS file was successfully produced:
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas 194224616 Oct 12 11:21 shared/HITS.pool.root.1
[2025-10-12 11:24:14]  *** Contents of shared directory: ***
[2025-10-12 11:24:14] total 409544
[2025-10-12 11:24:14] -rw-r--r--. 2 boincer umatlas 221964470 Oct 12 06:47 ATLAS.root_0
[2025-10-12 11:24:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:47 start_atlas.sh
[2025-10-12 11:24:14] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 06:47 input.tar.gz
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas 194224616 Oct 12 11:21 HITS.pool.root.1
[2025-10-12 11:24:14] -rw-------. 1 boincer umatlas   2580480 Oct 12 11:24 result.tar.gz
11:24:15 (3621296): run_atlas exited; CPU time 50864.217921
11:24:15 (3621296): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN