Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
12:00:40 (3617810): wrapper (7.7.26015): starting
12:00:40 (3617810): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 12:00:40] Arguments: --nthreads 12
[2025-10-12 12:00:40] Threads: 12
[2025-10-12 12:00:40] Checking for CVMFS
[2025-10-12 12:00:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:00:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:00:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:00:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:00:41] 2.11.0.0 3299214 3034 84316 151619 1 188 5375433 6144001 14248 130560 0 59429574 100.000 108843 194 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 12:00:41] CVMFS is ok
[2025-10-12 12:00:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:00:41] Checking for apptainer binary...
[2025-10-12 12:00:41] apptainer is not installed, using version from CVMFS
[2025-10-12 12:00:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:00:41] radiat0r
[2025-10-12 12:00:41] apptainer works
[2025-10-12 12:00:41] Set ATHENA_PROC_NUMBER=12
[2025-10-12 12:00:41] Set ATHENA_CORE_NUMBER=12
[2025-10-12 12:00:41] Starting ATLAS job with PandaID=6839083874
[2025-10-12 12:00:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:54:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:54:07]  workdir=None
[2025-10-12 12:54:07] ]
[2025-10-12 12:54:07] 2025-10-12 12:53:24,569 | INFO     | transferring file log.46676269._066638.job.log.tgz.1 from /var/lib/boinc/slots/20/PanDA_Pilot-6839083874/log.46676269._066638.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 12:54:07] 2025-10-12 12:53:24,570 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/20/PanDA_Pilot-6839083874/log.46676269._066638.job.log.tgz.1 /var/lib/boinc/slots/20/log.46676269._066638.j
[2025-10-12 12:54:07] 2025-10-12 12:53:24,600 | INFO     | adding to output.list: log.46676269._066638.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/15/log.46676269._066638.job.log.tg
[2025-10-12 12:54:07] 2025-10-12 12:53:24,601 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 12:54:07] 2025-10-12 12:53:24,601 | INFO     | summary of transferred files:
[2025-10-12 12:54:07] 2025-10-12 12:53:24,602 | INFO     |  -- lfn=log.46676269._066638.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 12:54:07] 2025-10-12 12:53:24,602 | INFO     | stage-out finished correctly
[2025-10-12 12:54:07] 2025-10-12 12:53:25,250 | INFO     | monitor loop #221: job 0:6839083874 is in state 'finished'
[2025-10-12 12:54:07] 2025-10-12 12:53:25,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:54:07] 2025-10-12 12:53:25,858 | INFO     | PID=3622542 has CPU usage=19.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 12:54:07] 2025-10-12 12:53:25,859 | INFO     | .. there are 17 such processes running
[2025-10-12 12:54:07] 2025-10-12 12:53:26,478 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:54:07] 2025-10-12 12:53:26,859 | INFO     | time since job start (3149s) is within the limit (172800.0s)
[2025-10-12 12:54:07] 2025-10-12 12:53:27,099 | INFO     | job 6839083874 has state=finished
[2025-10-12 12:54:07] 2025-10-12 12:53:27,100 | INFO     | preparing for final server update for job 6839083874 in state='finished'
[2025-10-12 12:54:07] 2025-10-12 12:53:27,100 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:54:07] 2025-10-12 12:53:27,101 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:54:07] 2025-10-12 12:53:27,101 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:54:07] 2025-10-12 12:53:27,101 | INFO     | job 6839083874 has finished - writing final server update
[2025-10-12 12:54:07] 2025-10-12 12:53:27,101 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:54:07] 2025-10-12 12:53:27,103 | INFO     | executing command: lscpu
[2025-10-12 12:54:07] 2025-10-12 12:53:27,305 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:54:07] 2025-10-12 12:53:27,754 | INFO     | monitor loop #222: job 0:6839083874 is in state 'finished'
[2025-10-12 12:54:07] 2025-10-12 12:53:27,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:54:07] 2025-10-12 12:53:28,863 | INFO     | time since job start (3151s) is within the limit (172800.0s)
[2025-10-12 12:54:07] 2025-10-12 12:53:30,257 | INFO     | monitor loop #223: job 0:6839083874 is in state 'finished'
[2025-10-12 12:54:07] 2025-10-12 12:53:30,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:54:07] 2025-10-12 12:53:30,867 | INFO     | time since job start (3153s) is within the limit (172800.0s)
[2025-10-12 12:54:07] 2025-10-12 12:53:32,758 | INFO     | monitor loop #224: job 0:6839083874 is in state 'finished'
[2025-10-12 12:54:07] 2025-10-12 12:53:32,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:54:07] 2025-10-12 12:53:32,871 | INFO     | time since job start (3155s) is within the limit (172800.0s)
[2025-10-12 12:54:07] 2025-10-12 12:53:33,991 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 12:54:07] 2025-10-12 12:53:34,053 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2365.859410156248
[2025-10-12 12:54:07] 2025-10-12 12:53:34,106 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6839083874/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:54:07] 2025-10-12 12:53:34,107 | INFO     | extracted standard info from prmon json
[2025-10-12 12:54:07] 2025-10-12 12:53:34,107 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:54:07] 2025-10-12 12:53:34,107 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:54:07] 2025-10-12 12:53:34,108 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:54:07] 2025-10-12 12:53:34,108 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:54:07] 2025-10-12 12:53:34,109 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:54:07] 2025-10-12 12:53:34,109 | INFO     | sum of square deviations: 26400495.0
[2025-10-12 12:54:07] 2025-10-12 12:53:34,110 | INFO     | sum of deviations: 339776405.0
[2025-10-12 12:54:07] 2025-10-12 12:53:34,110 | INFO     | mean x: 1760272107.5
[2025-10-12 12:54:07] 2025-10-12 12:53:34,110 | INFO     | mean y: 2663999.5
[2025-10-12 12:54:07] 2025-10-12 12:53:34,110 | INFO     | -- intersect: -22652173665.783302
[2025-10-12 12:54:07] 2025-10-12 12:53:34,110 | INFO     | intersect: -22652173665.783302
[2025-10-12 12:54:07] 2025-10-12 12:53:34,110 | INFO     | chi2: 0.0011297805283465808
[2025-10-12 12:54:07] 2025-10-12 12:53:34,110 | INFO     | -- intersect: -22652173665.783302
[2025-10-12 12:54:07] 2025-10-12 12:53:34,111 | INFO     | current memory leak: 12.87 B/s (using 44 data points, chi2=0.00)
[2025-10-12 12:54:07] 2025-10-12 12:53:34,111 | INFO     | could have reported an average CPU frequency of 2370 MHz (5 samples)
[2025-10-12 12:54:07] 2025-10-12 12:53:34,111 | INFO     | ..............................
[2025-10-12 12:54:07] 2025-10-12 12:53:34,111 | INFO     | . Timing measurements:
[2025-10-12 12:54:07] 2025-10-12 12:53:34,111 | INFO     | . get job = 0 s
[2025-10-12 12:54:07] 2025-10-12 12:53:34,111 | INFO     | . initial setup = 3 s
[2025-10-12 12:54:07] 2025-10-12 12:53:34,111 | INFO     | . payload setup = 8 s
[2025-10-12 12:54:07] 2025-10-12 12:53:34,112 | INFO     | . stage-in = 0 s
[2025-10-12 12:54:07] 2025-10-12 12:53:34,112 | INFO     | . payload execution = 3116 s
[2025-10-12 12:54:07] 2025-10-12 12:53:34,112 | INFO     | . stage-out = 0 s
[2025-10-12 12:54:07] 2025-10-12 12:53:34,112 | INFO     | . log creation = 0 s
[2025-10-12 12:54:07] 2025-10-12 12:53:34,112 | INFO     | ..............................
[2025-10-12 12:54:07] 2025-10-12 12:53:34,207 | INFO     | 
[2025-10-12 12:54:07] 2025-10-12 12:53:34,208 | INFO     | job summary report
[2025-10-12 12:54:07] 2025-10-12 12:53:34,208 | INFO     | --------------------------------------------------
[2025-10-12 12:54:07] 2025-10-12 12:53:34,208 | INFO     | PanDA job id: 6839083874
[2025-10-12 12:54:07] 2025-10-12 12:53:34,208 | INFO     | task id: 46676269
[2025-10-12 12:54:07] 2025-10-12 12:53:34,208 | INFO     | errors: (none)
[2025-10-12 12:54:07] 2025-10-12 12:53:34,208 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:54:07] 2025-10-12 12:53:34,208 | INFO     | pilot state: finished 
[2025-10-12 12:54:07] 2025-10-12 12:53:34,208 | INFO     | transexitcode: 0
[2025-10-12 12:54:07] 2025-10-12 12:53:34,208 | INFO     | exeerrorcode: 0
[2025-10-12 12:54:07] 2025-10-12 12:53:34,208 | INFO     | exeerrordiag: 
[2025-10-12 12:54:07] 2025-10-12 12:53:34,208 | INFO     | exitcode: 0
[2025-10-12 12:54:07] 2025-10-12 12:53:34,209 | INFO     | exitmsg: OK
[2025-10-12 12:54:07] 2025-10-12 12:53:34,209 | INFO     | cpuconsumptiontime: 33031 s
[2025-10-12 12:54:07] 2025-10-12 12:53:34,209 | INFO     | nevents: 400
[2025-10-12 12:54:07] 2025-10-12 12:53:34,209 | INFO     | neventsw: 0
[2025-10-12 12:54:07] 2025-10-12 12:53:34,209 | INFO     | pid: 3635832
[2025-10-12 12:54:07] 2025-10-12 12:53:34,209 | INFO     | pgrp: 3635832
[2025-10-12 12:54:07] 2025-10-12 12:53:34,209 | INFO     | corecount: 12
[2025-10-12 12:54:07] 2025-10-12 12:53:34,209 | INFO     | event service: False
[2025-10-12 12:54:07] 2025-10-12 12:53:34,209 | INFO     | sizes: {0: 2348027, 1: 2348884, 8: 2349146, 12: 2349174, 3129: 2374884, 3130: 2383884, 3132: 2384068, 3140: 2384294}
[2025-10-12 12:54:07] 2025-10-12 12:53:34,209 | INFO     | --------------------------------------------------
[2025-10-12 12:54:07] 2025-10-12 12:53:34,209 | INFO     | 
[2025-10-12 12:54:07] 2025-10-12 12:53:34,210 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-10-12 12:54:07] 2025-10-12 12:53:34,239 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,240 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,240 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,240 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,241 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:54:07] 2025-10-12 12:53:34,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:54:07] 2025-10-12 12:53:34,241 | INFO     | job 6839083874 has completed (purged errors)
[2025-10-12 12:54:07] 2025-10-12 12:53:34,242 | INFO     | overall cleanup function is called
[2025-10-12 12:54:07] 2025-10-12 12:53:35,250 | INFO     | --- collectZombieJob: --- 10, [3635832]
[2025-10-12 12:54:07] 2025-10-12 12:53:35,251 | INFO     | zombie collector waiting for pid 3635832
[2025-10-12 12:54:07] 2025-10-12 12:53:35,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:54:07] 2025-10-12 12:53:35,251 | INFO     | collected zombie processes
[2025-10-12 12:54:07] 2025-10-12 12:53:35,251 | INFO     | will attempt to kill all subprocesses of pid=3635832
[2025-10-12 12:54:07] 2025-10-12 12:53:36,056 | INFO     | process IDs to be killed: [3635832] (in reverse order)
[2025-10-12 12:54:07] 2025-10-12 12:53:36,324 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:54:07] 2025-10-12 12:53:36,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:54:07] 2025-10-12 12:53:36,353 | INFO     | did not find any defunct processes belonging to 3635832
[2025-10-12 12:54:07] 2025-10-12 12:53:36,378 | INFO     | did not find any defunct processes belonging to 3635832
[2025-10-12 12:54:07] 2025-10-12 12:53:36,378 | INFO     | ready for new job
[2025-10-12 12:54:07] 2025-10-12 12:53:36,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:54:07] 2025-10-12 12:53:36,380 | INFO     | ***************************************
[2025-10-12 12:54:07] 2025-10-12 12:53:36,380 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:54:07] 2025-10-12 12:53:36,380 | INFO     | ***************************************
[2025-10-12 12:54:07] 2025-10-12 12:53:36,380 | INFO     | 
[2025-10-12 12:54:07] 2025-10-12 12:53:36,416 | INFO     | architecture information:
[2025-10-12 12:54:07] 2025-10-12 12:53:36,416 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:54:07] 2025-10-12 12:53:36,439 | INFO     | cat /etc/os-release:
[2025-10-12 12:54:07] NAME="CentOS Linux"
[2025-10-12 12:54:07] VERSION="7 (Core)"
[2025-10-12 12:54:07] ID="centos"
[2025-10-12 12:54:07] ID_LIKE="rhel fedora"
[2025-10-12 12:54:07] VERSION_ID="7"
[2025-10-12 12:54:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:54:07] ANSI_COLOR="0;31"
[2025-10-12 12:54:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:54:07] HOME_URL="https://www.centos.org/"
[2025-10-12 12:54:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:54:07] 
[2025-10-12 12:54:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:54:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:54:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:54:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:54:07] 
[2025-10-12 12:54:07] 2025-10-12 12:53:36,440 | INFO     | ***************************************
[2025-10-12 12:54:07] 2025-10-12 12:53:36,943 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-10-12 12:54:07] 2025-10-12 12:53:36,977 | INFO     | sufficient remaining disk space (1727258427392 B)
[2025-10-12 12:54:07] 2025-10-12 12:53:36,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:54:07] 2025-10-12 12:53:36,979 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:54:07] 2025-10-12 12:53:36,979 | INFO     | update_server=False
[2025-10-12 12:54:07] 2025-10-12 12:53:36,979 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:54:07] 2025-10-12 12:53:36,980 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:54:07] 2025-10-12 12:53:36,980 | INFO     | aborting loop
[2025-10-12 12:54:07] 2025-10-12 12:53:37,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:54:07] 2025-10-12 12:53:37,100 | INFO     | all payload control threads have been joined
[2025-10-12 12:54:07] 2025-10-12 12:53:37,398 | INFO     | all data control threads have been joined
[2025-10-12 12:54:07] 2025-10-12 12:53:37,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:54:07] 2025-10-12 12:53:37,982 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:37,986 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:38,054 | INFO     | all job control threads have been joined
[2025-10-12 12:54:07] 2025-10-12 12:53:38,102 | INFO     | [payload] control thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:38,114 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:38,116 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:38,118 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:38,258 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:38,402 | INFO     | [data] control thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:39,058 | INFO     | [job] control thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:39,087 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:39,093 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:39,162 | INFO     | [job] validate thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:39,214 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:54:07] 2025-10-12 12:53:39,728 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:40,218 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:41,090 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:53:47,246 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:54:07] 2025-10-12 12:53:48,250 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:54:07] 2025-10-12 12:54:01,538 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:54:07] 2025-10-12 12:54:01,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139709967042368)>', '<ExcThread(monitor, started 139709305054976)>']
[2025-10-12 12:54:07] 2025-10-12 12:54:04,948 | INFO     | 3161s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 12:54:07] 2025-10-12 12:54:06,658 | INFO     | all workflow threads have been joined
[2025-10-12 12:54:07] 2025-10-12 12:54:06,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:54:07] 2025-10-12 12:54:06,659 | INFO     | traces error code: 0
[2025-10-12 12:54:07] 2025-10-12 12:54:06,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:54:07] 2025-10-12 12:54:06,951 | INFO     | PID=3622542 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:54:07] 2025-10-12 12:54:06,952 | INFO     | .. there are 17 such processes running
[2025-10-12 12:54:07] 2025-10-12 12:54:06,953 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:54:07] 2025-10-12 12:54:06,953 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:54:07] 2025-10-12 12:54:06,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:54:07] 2025-10-12 12:54:06,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:54:07] 2025-10-12 12:54:06,953 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 12:54:07] 2025-10-12 12:54:06,954 | INFO     | [monitor] control thread has ended
[2025-10-12 12:54:07] 2025-10-12 12:54:07,170 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:54:07] 2025-10-12 12:54:07,174 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:54:07] 2025-10-12 12:54:07,178 [wrapper] pilotpid: 3622542
[2025-10-12 12:54:07] 2025-10-12 12:54:07,181 [wrapper] Pilot exit status: 0
[2025-10-12 12:54:07] 2025-10-12 12:54:07,195 [wrapper] pandaids: 6839083874
[2025-10-12 12:54:07] 2025-10-12 12:54:07,384 [wrapper] cleanup supervisor_pilot 4054508 3622543
[2025-10-12 12:54:07] 2025-10-12 12:54:07,388 [wrapper] Test setup, not cleaning
[2025-10-12 12:54:07] 2025-10-12 12:54:07,392 [wrapper] apfmon messages muted
[2025-10-12 12:54:07] 2025-10-12 12:54:07,395 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:54:07] 2025-10-12 12:54:07,398 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:54:07]  *** Error codes and diagnostics ***
[2025-10-12 12:54:07]     "exeErrorCode": 0,
[2025-10-12 12:54:07]     "exeErrorDiag": "",
[2025-10-12 12:54:07]     "pilotErrorCode": 0,
[2025-10-12 12:54:07]     "pilotErrorDiag": "",
[2025-10-12 12:54:07]  *** Listing of results directory ***
[2025-10-12 12:54:07] total 419244
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:51 pilot3.tar.gz
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc      5112 Oct 11 23:05 queuedata.json
[2025-10-12 12:54:07] -rwx------ 1 boinc boinc     36292 Oct 11 23:06 runpilot2-wrapper.sh
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc       100 Oct 12 12:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:54:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 12:00 run_atlas
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc       105 Oct 12 12:00 job.xml
[2025-10-12 12:54:07] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:00 start_atlas.sh
[2025-10-12 12:54:07] drwxrwx--x 2 boinc boinc      4096 Oct 12 12:00 shared
[2025-10-12 12:54:07] -rw-r--r-- 2 boinc boinc    569681 Oct 12 12:00 input.tar.gz
[2025-10-12 12:54:07] -rw-r--r-- 2 boinc boinc 220641972 Oct 12 12:00 EVNT.46676267._002687.pool.root.1
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc         0 Oct 12 12:00 boinc_setup_complete
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc      9396 Oct 12 12:00 init_data.xml
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc         0 Oct 12 12:00 boinc_lockfile
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc      2549 Oct 12 12:00 pandaJob.out
[2025-10-12 12:54:07] -rw------- 1 boinc boinc    975520 Oct 12 12:00 agis_schedconf.cvmfs.json
[2025-10-12 12:54:07] -rw------- 1 boinc boinc   1560580 Oct 12 12:00 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:54:07] drwx------ 5 boinc boinc      4096 Oct 12 12:00 pilot3
[2025-10-12 12:54:07] -rw------- 1 boinc boinc 203118476 Oct 12 12:52 HITS.46676269._066638.pool.root.1
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc       529 Oct 12 12:52 boinc_task_state.xml
[2025-10-12 12:54:07] -rw------- 1 boinc boinc      1024 Oct 12 12:53 memory_monitor_summary.json
[2025-10-12 12:54:07] -rw------- 1 boinc boinc    351336 Oct 12 12:53 log.46676269._066638.job.log.tgz.1
[2025-10-12 12:54:07] -rw------- 1 boinc boinc      7732 Oct 12 12:53 heartbeat.json
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc      8192 Oct 12 12:54 boinc_mmap_file
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc        27 Oct 12 12:54 wrapper_checkpoint.txt
[2025-10-12 12:54:07] -rw------- 1 boinc boinc       893 Oct 12 12:54 pilotlog.txt
[2025-10-12 12:54:07] -rw------- 1 boinc boinc        95 Oct 12 12:54 pilot_heartbeat.json
[2025-10-12 12:54:07] -rw------- 1 boinc boinc    468200 Oct 12 12:54 log.46676269._066638.job.log.1
[2025-10-12 12:54:07] -rw------- 1 boinc boinc       357 Oct 12 12:54 output.list
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc       620 Oct 12 12:54 runtime_log
[2025-10-12 12:54:07] -rw------- 1 boinc boinc    839680 Oct 12 12:54 result.tar.gz
[2025-10-12 12:54:07] -rw------- 1 boinc boinc       644 Oct 12 12:54 sm5NDmIqxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRlSMDmIFWvRm.diag
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc      8672 Oct 12 12:54 runtime_log.err
[2025-10-12 12:54:07] -rw-r--r-- 1 boinc boinc     22034 Oct 12 12:54 stderr.txt
[2025-10-12 12:54:07] HITS file was successfully produced:
[2025-10-12 12:54:07] -rw------- 1 boinc boinc 203118476 Oct 12 12:52 shared/HITS.pool.root.1
[2025-10-12 12:54:07]  *** Contents of shared directory: ***
[2025-10-12 12:54:07] total 415236
[2025-10-12 12:54:07] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:00 start_atlas.sh
[2025-10-12 12:54:07] -rw-r--r-- 2 boinc boinc    569681 Oct 12 12:00 input.tar.gz
[2025-10-12 12:54:07] -rw-r--r-- 2 boinc boinc 220641972 Oct 12 12:00 ATLAS.root_0
[2025-10-12 12:54:07] -rw------- 1 boinc boinc 203118476 Oct 12 12:52 HITS.pool.root.1
[2025-10-12 12:54:07] -rw------- 1 boinc boinc    839680 Oct 12 12:54 result.tar.gz
12:54:08 (3617810): run_atlas exited; CPU time 33210.167099
12:54:08 (3617810): called boinc_finish(0)

</stderr_txt>
]]>

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