Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:44:16 (3055000): wrapper (7.7.26015): starting
02:44:16 (3055000): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 02:44:16] Arguments: --nthreads 3
[2025-10-13 02:44:16] Threads: 3
[2025-10-13 02:44:16] Checking for CVMFS
[2025-10-13 02:44:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:44:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:44:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:44:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:44:16] 2.9.2.0 185998 9410 88508 151642 0 57 5101750 36864001 12 130560 0 7576296 99.991 323069 848 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 02:44:16] CVMFS is ok
[2025-10-13 02:44:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:44:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:44:16] Further information can be found at the LHC@home message board.
[2025-10-13 02:44:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:44:16] Checking for apptainer binary...
[2025-10-13 02:44:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:44:16] Running /usr/bin/apptainer --version
[2025-10-13 02:44:16] apptainer version 1.4.1-1.1
[2025-10-13 02:44:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:44:16] thA387a
[2025-10-13 02:44:16] apptainer works
[2025-10-13 02:44:16] Set ATHENA_PROC_NUMBER=3
[2025-10-13 02:44:16] Set ATHENA_CORE_NUMBER=3
[2025-10-13 02:44:16] Starting ATLAS job with PandaID=6839588893
[2025-10-13 02:44:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:04:33]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:04:33] 2025-10-13 02:03:33,889 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:33,889 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:33,955 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:34,110 | INFO     | [data] control thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:34,110 | INFO     | all payload control threads have been joined
[2025-10-13 04:04:33] 2025-10-13 02:03:34,242 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:34,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:04:33] 2025-10-13 02:03:34,396 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:34,490 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:34,609 | INFO     | [job] control thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:34,705 | INFO     | [job] validate thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:34,779 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:34,877 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:35,116 | INFO     | [payload] control thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:35,128 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:36,344 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:36,890 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:03:43,930 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:04:33] 2025-10-13 02:03:44,936 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:04:33] 2025-10-13 02:04:03,172 | INFO     | PID=3058722 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:04:33] 2025-10-13 02:04:03,172 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:04:33] 2025-10-13 02:04:03,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:04:33] 2025-10-13 02:04:03,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:04:33] 2025-10-13 02:04:27,243 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:04:33] 2025-10-13 02:04:28,563 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887384692544)>', '<ExcThread(monitor, started 139887103674112)>']
[2025-10-13 04:04:33] 2025-10-13 02:04:29,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:04:33] 2025-10-13 02:04:29,277 | INFO     | [monitor] control thread has ended
[2025-10-13 04:04:33] 2025-10-13 02:04:33,589 | INFO     | all workflow threads have been joined
[2025-10-13 04:04:33] 2025-10-13 02:04:33,589 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:04:33] 2025-10-13 02:04:33,589 | INFO     | traces error code: 0
[2025-10-13 04:04:33] 2025-10-13 02:04:33,589 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:04:33] 2025-10-13 02:04:33,637 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:04:33] 2025-10-13 02:04:33,639 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:04:33] 2025-10-13 02:04:33,642 [wrapper] pilotpid: 3058722
[2025-10-13 04:04:33] 2025-10-13 02:04:33,644 [wrapper] Pilot exit status: 0
[2025-10-13 04:04:33] 2025-10-13 02:04:33,651 [wrapper] pandaids: 6839588893
[2025-10-13 04:04:33] 2025-10-13 02:04:33,667 [wrapper] cleanup supervisor_pilot 3077275 3058723
[2025-10-13 04:04:33] 2025-10-13 02:04:33,669 [wrapper] Test setup, not cleaning
[2025-10-13 04:04:33] 2025-10-13 02:04:33,672 [wrapper] apfmon messages muted
[2025-10-13 04:04:33] 2025-10-13 02:04:33,674 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:04:33] 2025-10-13 02:04:33,676 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:04:33]  *** Error codes and diagnostics ***
[2025-10-13 04:04:33]     "exeErrorCode": 0,
[2025-10-13 04:04:33]     "exeErrorDiag": "",
[2025-10-13 04:04:33]     "pilotErrorCode": 0,
[2025-10-13 04:04:33]     "pilotErrorDiag": "",
[2025-10-13 04:04:33]  *** Listing of results directory ***
[2025-10-13 04:04:33] total 409412
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc    557409 Oct 12 07:26 pilot3.tar.gz
[2025-10-13 04:04:33] -rwx------ 1 boinc boinc     36292 Oct 12 07:35 runpilot2-wrapper.sh
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc      5112 Oct 12 07:35 queuedata.json
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:04:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:44 run_atlas
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:44 job.xml
[2025-10-13 04:04:33] -rw-r--r-- 2 boinc boinc 222030418 Oct 13 02:44 EVNT.46676267._004326.pool.root.1
[2025-10-13 04:04:33] -rw-r--r-- 2 boinc boinc    569678 Oct 13 02:44 input.tar.gz
[2025-10-13 04:04:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:44 start_atlas.sh
[2025-10-13 04:04:33] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:44 shared
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:44 boinc_setup_complete
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc      6439 Oct 13 02:44 init_data.xml
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:44 boinc_lockfile
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc      2550 Oct 13 02:44 pandaJob.out
[2025-10-13 04:04:33] -rw------- 1 boinc boinc    975603 Oct 13 02:44 agis_schedconf.cvmfs.json
[2025-10-13 04:04:33] -rw------- 1 boinc boinc   1560580 Oct 13 02:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:04:33] drwx------ 5 boinc boinc      4096 Oct 13 02:44 pilot3
[2025-10-13 04:04:33] -rw------- 1 boinc boinc 191394145 Oct 13 04:03 HITS.46676269._072085.pool.root.1
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc       529 Oct 13 04:03 boinc_task_state.xml
[2025-10-13 04:04:33] -rw------- 1 boinc boinc      1035 Oct 13 04:03 memory_monitor_summary.json
[2025-10-13 04:04:33] -rw------- 1 boinc boinc    259852 Oct 13 04:03 log.46676269._072085.job.log.tgz.1
[2025-10-13 04:04:33] -rw------- 1 boinc boinc      7769 Oct 13 04:03 heartbeat.json
[2025-10-13 04:04:33] -rw------- 1 boinc boinc        95 Oct 13 04:04 pilot_heartbeat.json
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:04 boinc_mmap_file
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:04 wrapper_checkpoint.txt
[2025-10-13 04:04:33] -rw------- 1 boinc boinc      4824 Oct 13 04:04 pilotlog.txt
[2025-10-13 04:04:33] -rw------- 1 boinc boinc    700228 Oct 13 04:04 log.46676269._072085.job.log.1
[2025-10-13 04:04:33] -rw------- 1 boinc boinc       357 Oct 13 04:04 output.list
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc       620 Oct 13 04:04 runtime_log
[2025-10-13 04:04:33] -rw------- 1 boinc boinc    983040 Oct 13 04:04 result.tar.gz
[2025-10-13 04:04:33] -rw------- 1 boinc boinc       659 Oct 13 04:04 v77LDmyu3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaliNDmDRHein.diag
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc      8782 Oct 13 04:04 runtime_log.err
[2025-10-13 04:04:33] -rw-r--r-- 1 boinc boinc      6625 Oct 13 04:04 stderr.txt
[2025-10-13 04:04:33] HITS file was successfully produced:
[2025-10-13 04:04:33] -rw------- 1 boinc boinc 191394145 Oct 13 04:03 shared/HITS.pool.root.1
[2025-10-13 04:04:33]  *** Contents of shared directory: ***
[2025-10-13 04:04:33] total 405284
[2025-10-13 04:04:33] -rw-r--r-- 2 boinc boinc 222030418 Oct 13 02:44 ATLAS.root_0
[2025-10-13 04:04:33] -rw-r--r-- 2 boinc boinc    569678 Oct 13 02:44 input.tar.gz
[2025-10-13 04:04:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:44 start_atlas.sh
[2025-10-13 04:04:33] -rw------- 1 boinc boinc 191394145 Oct 13 04:03 HITS.pool.root.1
[2025-10-13 04:04:33] -rw------- 1 boinc boinc    983040 Oct 13 04:04 result.tar.gz
04:04:35 (3055000): run_atlas exited; CPU time 13607.831548
04:04:35 (3055000): called boinc_finish(0)

</stderr_txt>
]]>

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