Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:39:29 (3188388): wrapper (7.7.26015): starting
08:39:29 (3188388): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 08:39:29] Arguments: --nthreads 8
[2025-10-12 08:39:29] Threads: 8
[2025-10-12 08:39:29] Checking for CVMFS
[2025-10-12 08:39:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:39:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:39:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:39:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:39:30] 2.13.2.0 1630706 123822 151000 151620 2 119 35222085 40960001 23152 16776704 1 350610745 99.725 251950075 34079 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:39:30] CVMFS is ok
[2025-10-12 08:39:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:39:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:39:30] Further information can be found at the LHC@home message board.
[2025-10-12 08:39:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:39:30] Checking for apptainer binary...
[2025-10-12 08:39:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:39:30] Running /usr/bin/apptainer --version
[2025-10-12 08:39:30] apptainer version 1.4.3-1.el9
[2025-10-12 08:39:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:39:30] c-212-16.aglt2.org
[2025-10-12 08:39:30] apptainer works
[2025-10-12 08:39:30] Set ATHENA_PROC_NUMBER=8
[2025-10-12 08:39:30] Set ATHENA_CORE_NUMBER=8
[2025-10-12 08:39:30] Starting ATLAS job with PandaID=6839319354
[2025-10-12 08:39:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:13:14]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:13:14] 2025-10-12 14:12:26,003 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 10:13:14] 2025-10-12 14:12:26,003 | INFO     | summary of transferred files:
[2025-10-12 10:13:14] 2025-10-12 14:12:26,003 | INFO     |  -- lfn=log.46676269._070056.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 10:13:14] 2025-10-12 14:12:26,003 | INFO     | stage-out finished correctly
[2025-10-12 10:13:14] 2025-10-12 14:12:26,122 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 10:13:14] 2025-10-12 14:12:26,208 | INFO     | job 6839319354 has state=finished
[2025-10-12 10:13:14] 2025-10-12 14:12:26,209 | INFO     | preparing for final server update for job 6839319354 in state='finished'
[2025-10-12 10:13:14] 2025-10-12 14:12:26,209 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:13:14] 2025-10-12 14:12:26,209 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:13:14] 2025-10-12 14:12:26,209 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:13:14] 2025-10-12 14:12:26,209 | INFO     | job 6839319354 has finished - writing final server update
[2025-10-12 10:13:14] 2025-10-12 14:12:26,210 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:13:14] 2025-10-12 14:12:26,210 | INFO     | executing command: lscpu
[2025-10-12 10:13:14] 2025-10-12 14:12:26,237 | INFO     | number of running child processes to parent process 3199603: 1
[2025-10-12 10:13:14] 2025-10-12 14:12:26,237 | INFO     | maximum number of monitored processes: 6
[2025-10-12 10:13:14] 2025-10-12 14:12:26,303 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:13:14] 2025-10-12 14:12:26,757 | INFO     | time since job start (5562s) is within the limit (172800.0s)
[2025-10-12 10:13:14] 2025-10-12 14:12:28,745 | INFO     | monitor loop #392: job 0:6839319354 is in state 'finished'
[2025-10-12 10:13:14] 2025-10-12 14:12:28,745 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:13:14] 2025-10-12 14:12:28,765 | INFO     | time since job start (5564s) is within the limit (172800.0s)
[2025-10-12 10:13:14] 2025-10-12 14:12:30,772 | INFO     | time since job start (5566s) is within the limit (172800.0s)
[2025-10-12 10:13:14] 2025-10-12 14:12:31,248 | INFO     | monitor loop #393: job 0:6839319354 is in state 'finished'
[2025-10-12 10:13:14] 2025-10-12 14:12:31,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:13:14] 2025-10-12 14:12:32,280 | INFO     | PID=3192051 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 10:13:14] 2025-10-12 14:12:32,281 | INFO     | .. there are 21 such processes running
[2025-10-12 10:13:14] 2025-10-12 14:12:33,291 | INFO     | time since job start (5569s) is within the limit (172800.0s)
[2025-10-12 10:13:14] 2025-10-12 14:12:33,752 | INFO     | monitor loop #394: job 0:6839319354 is in state 'finished'
[2025-10-12 10:13:14] 2025-10-12 14:12:33,752 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:13:14] 2025-10-12 14:12:35,298 | INFO     | time since job start (5571s) is within the limit (172800.0s)
[2025-10-12 10:13:14] 2025-10-12 14:12:36,258 | INFO     | monitor loop #395: job 0:6839319354 is in state 'finished'
[2025-10-12 10:13:14] 2025-10-12 14:12:36,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:13:14] 2025-10-12 14:12:37,304 | INFO     | time since job start (5573s) is within the limit (172800.0s)
[2025-10-12 10:13:14] 2025-10-12 14:12:38,763 | INFO     | monitor loop #396: job 0:6839319354 is in state 'finished'
[2025-10-12 10:13:14] 2025-10-12 14:12:38,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:13:14] 2025-10-12 14:12:39,311 | INFO     | time since job start (5575s) is within the limit (172800.0s)
[2025-10-12 10:13:14] 2025-10-12 14:12:40,293 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 10:13:14] 2025-10-12 14:12:40,310 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3252.5846770833336
[2025-10-12 10:13:14] 2025-10-12 14:12:40,356 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6839319354/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:13:14] 2025-10-12 14:12:40,357 | INFO     | extracted standard info from prmon json
[2025-10-12 10:13:14] 2025-10-12 14:12:40,357 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:13:14] 2025-10-12 14:12:40,357 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:13:14] 2025-10-12 14:12:40,361 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:13:14] 2025-10-12 14:12:40,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:13:14] 2025-10-12 14:12:40,363 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:13:14] 2025-10-12 14:12:40,363 | INFO     | sum of square deviations: 183761585.0
[2025-10-12 10:13:14] 2025-10-12 14:12:40,363 | INFO     | sum of deviations: -11577544959.000002
[2025-10-12 10:13:14] 2025-10-12 14:12:40,363 | INFO     | mean x: 1760275651.5
[2025-10-12 10:13:14] 2025-10-12 14:12:40,363 | INFO     | mean y: 2597173.761904762
[2025-10-12 10:13:14] 2025-10-12 14:12:40,363 | INFO     | -- intersect: 110905376421.52617
[2025-10-12 10:13:14] 2025-10-12 14:12:40,363 | INFO     | intersect: 110905376421.52617
[2025-10-12 10:13:14] 2025-10-12 14:12:40,363 | INFO     | chi2: 0.06519886387974641
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | -- intersect: 110905376421.52617
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | current memory leak: -63.00 B/s (using 84 data points, chi2=0.07)
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | could have reported an average CPU frequency of 3118 MHz (7 samples)
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | ..............................
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | . Timing measurements:
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | . get job = 0 s
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | . initial setup = 2 s
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | . payload setup = 7 s
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | . stage-in = 0 s
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | . payload execution = 5531 s
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | . stage-out = 1 s
[2025-10-12 10:13:14] 2025-10-12 14:12:40,364 | INFO     | . log creation = 0 s
[2025-10-12 10:13:14] 2025-10-12 14:12:40,365 | INFO     | ..............................
[2025-10-12 10:13:14] 2025-10-12 14:12:40,528 | INFO     | 
[2025-10-12 10:13:14] 2025-10-12 14:12:40,529 | INFO     | job summary report
[2025-10-12 10:13:14] 2025-10-12 14:12:40,529 | INFO     | --------------------------------------------------
[2025-10-12 10:13:14] 2025-10-12 14:12:40,529 | INFO     | PanDA job id: 6839319354
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | task id: 46676269
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | errors: (none)
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | pilot state: finished 
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | transexitcode: 0
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | exeerrorcode: 0
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | exeerrordiag: 
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | exitcode: 0
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | exitmsg: OK
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | cpuconsumptiontime: 35832 s
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | nevents: 400
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | neventsw: 0
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | pid: 3199603
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | pgrp: 3199603
[2025-10-12 10:13:14] 2025-10-12 14:12:40,530 | INFO     | corecount: 8
[2025-10-12 10:13:14] 2025-10-12 14:12:40,531 | INFO     | event service: False
[2025-10-12 10:13:14] 2025-10-12 14:12:40,531 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 5542: 2375687, 5545: 2384741, 5559: 2384879}
[2025-10-12 10:13:14] 2025-10-12 14:12:40,531 | INFO     | --------------------------------------------------
[2025-10-12 10:13:14] 2025-10-12 14:12:40,531 | INFO     | 
[2025-10-12 10:13:14] 2025-10-12 14:12:40,531 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 10:13:14] 2025-10-12 14:12:40,558 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,558 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,558 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,558 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | job 6839319354 has completed (purged errors)
[2025-10-12 10:13:14] 2025-10-12 14:12:40,559 | INFO     | overall cleanup function is called
[2025-10-12 10:13:14] 2025-10-12 14:12:41,568 | INFO     | --- collectZombieJob: --- 10, [3199603]
[2025-10-12 10:13:14] 2025-10-12 14:12:41,569 | INFO     | zombie collector waiting for pid 3199603
[2025-10-12 10:13:14] 2025-10-12 14:12:41,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:13:14] 2025-10-12 14:12:41,569 | INFO     | collected zombie processes
[2025-10-12 10:13:14] 2025-10-12 14:12:41,569 | INFO     | will attempt to kill all subprocesses of pid=3199603
[2025-10-12 10:13:14] 2025-10-12 14:12:42,475 | INFO     | process IDs to be killed: [3199603] (in reverse order)
[2025-10-12 10:13:14] 2025-10-12 14:12:42,611 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:13:14] 2025-10-12 14:12:42,611 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:13:14] 2025-10-12 14:12:42,627 | INFO     | did not find any defunct processes belonging to 3199603
[2025-10-12 10:13:14] 2025-10-12 14:12:42,675 | INFO     | did not find any defunct processes belonging to 3199603
[2025-10-12 10:13:14] 2025-10-12 14:12:42,680 | INFO     | ready for new job
[2025-10-12 10:13:14] 2025-10-12 14:12:42,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:13:14] 2025-10-12 14:12:42,682 | INFO     | ***************************************
[2025-10-12 10:13:14] 2025-10-12 14:12:42,682 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:13:14] 2025-10-12 14:12:42,682 | INFO     | ***************************************
[2025-10-12 10:13:14] 2025-10-12 14:12:42,682 | INFO     | 
[2025-10-12 10:13:14] 2025-10-12 14:12:42,688 | INFO     | architecture information:
[2025-10-12 10:13:14] 2025-10-12 14:12:42,688 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:13:14] 2025-10-12 14:12:42,732 | INFO     | cat /etc/os-release:
[2025-10-12 10:13:14] NAME="CentOS Linux"
[2025-10-12 10:13:14] VERSION="7 (Core)"
[2025-10-12 10:13:14] ID="centos"
[2025-10-12 10:13:14] ID_LIKE="rhel fedora"
[2025-10-12 10:13:14] VERSION_ID="7"
[2025-10-12 10:13:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:13:14] ANSI_COLOR="0;31"
[2025-10-12 10:13:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:13:14] HOME_URL="https://www.centos.org/"
[2025-10-12 10:13:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:13:14] 
[2025-10-12 10:13:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:13:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:13:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:13:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:13:14] 
[2025-10-12 10:13:14] 2025-10-12 14:12:42,732 | INFO     | ***************************************
[2025-10-12 10:13:14] 2025-10-12 14:12:43,236 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 10:13:14] 2025-10-12 14:12:43,271 | INFO     | sufficient remaining disk space (127174443008 B)
[2025-10-12 10:13:14] 2025-10-12 14:12:43,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:13:14] 2025-10-12 14:12:43,272 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:13:14] 2025-10-12 14:12:43,272 | INFO     | update_server=False
[2025-10-12 10:13:14] 2025-10-12 14:12:43,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:13:14] 2025-10-12 14:12:43,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:13:14] 2025-10-12 14:12:43,272 | INFO     | aborting loop
[2025-10-12 10:13:14] 2025-10-12 14:12:43,595 | INFO     | all data control threads have been joined
[2025-10-12 10:13:14] 2025-10-12 14:12:44,144 | INFO     | all payload control threads have been joined
[2025-10-12 10:13:14] 2025-10-12 14:12:44,192 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:13:14] 2025-10-12 14:12:44,280 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:44,280 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:44,343 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:44,349 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:44,371 | INFO     | all job control threads have been joined
[2025-10-12 10:13:14] 2025-10-12 14:12:44,540 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:44,601 | INFO     | [data] control thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:44,930 | INFO     | [job] validate thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:45,093 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:45,150 | INFO     | [payload] control thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:45,205 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:45,377 | INFO     | [job] control thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:45,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:13:14] 2025-10-12 14:12:45,576 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:45,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:13:14] 2025-10-12 14:12:46,199 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:46,556 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:49,771 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:53,303 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:13:14] 2025-10-12 14:12:54,020 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:13:14] 2025-10-12 14:12:55,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:13:14] 2025-10-12 14:12:55,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140476953896768)>', '<ExcThread(monitor, started 140476468410112)>']
[2025-10-12 10:13:14] 2025-10-12 14:13:00,604 | INFO     | all workflow threads have been joined
[2025-10-12 10:13:14] 2025-10-12 14:13:00,604 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:13:14] 2025-10-12 14:13:00,604 | INFO     | traces error code: 0
[2025-10-12 10:13:14] 2025-10-12 14:13:00,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:13:14] 2025-10-12 14:13:13,195 | INFO     | PID=3192051 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:13:14] 2025-10-12 14:13:13,198 | INFO     | .. there are 21 such processes running
[2025-10-12 10:13:14] 2025-10-12 14:13:13,198 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:13:14] 2025-10-12 14:13:13,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:13:14] 2025-10-12 14:13:13,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:13:14] 2025-10-12 14:13:13,198 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:13:14] 2025-10-12 14:13:13,198 | INFO     | [monitor] control thread has ended
[2025-10-12 10:13:14] 2025-10-12 14:13:13,703 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:13:14] 2025-10-12 14:13:13,707 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:13:14] 2025-10-12 14:13:13,709 [wrapper] pilotpid: 3192051
[2025-10-12 10:13:14] 2025-10-12 14:13:13,711 [wrapper] Pilot exit status: 0
[2025-10-12 10:13:14] 2025-10-12 14:13:13,727 [wrapper] pandaids: 6839319354
[2025-10-12 10:13:14] 2025-10-12 14:13:13,860 [wrapper] cleanup supervisor_pilot 3509239 3192052
[2025-10-12 10:13:14] 2025-10-12 14:13:13,863 [wrapper] Test setup, not cleaning
[2025-10-12 10:13:14] 2025-10-12 14:13:13,866 [wrapper] apfmon messages muted
[2025-10-12 10:13:14] 2025-10-12 14:13:13,876 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:13:14] 2025-10-12 14:13:13,898 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:13:14]  *** Error codes and diagnostics ***
[2025-10-12 10:13:14]     "exeErrorCode": 0,
[2025-10-12 10:13:14]     "exeErrorDiag": "",
[2025-10-12 10:13:14]     "pilotErrorCode": 0,
[2025-10-12 10:13:14]     "pilotErrorDiag": "",
[2025-10-12 10:13:14]  *** Listing of results directory ***
[2025-10-12 10:13:14] total 415996
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 22:56 pilot3.tar.gz
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 23:17 queuedata.json
[2025-10-12 10:13:14] -rwx------. 1 boincer umatlas     36292 Oct 11 23:17 runpilot2-wrapper.sh
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas       100 Oct 12 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:13:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 08:39 run_atlas
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas       105 Oct 12 08:39 job.xml
[2025-10-12 10:13:14] -rw-r--r--. 2 boincer umatlas 220483396 Oct 12 08:39 EVNT.46676267._003216.pool.root.1
[2025-10-12 10:13:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:39 start_atlas.sh
[2025-10-12 10:13:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 08:39 shared
[2025-10-12 10:13:14] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 08:39 input.tar.gz
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas         0 Oct 12 08:39 boinc_lockfile
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 08:39 pandaJob.out
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas    975512 Oct 12 08:39 agis_schedconf.cvmfs.json
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas   1560580 Oct 12 08:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:13:14] drwx------. 5 boincer umatlas      4096 Oct 12 08:39 pilot3
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas      6945 Oct 12 10:11 init_data.xml
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas 199295160 Oct 12 10:11 HITS.46676269._070056.pool.root.1
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas       529 Oct 12 10:11 boinc_task_state.xml
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas        95 Oct 12 10:12 pilot_heartbeat.json
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas      1037 Oct 12 10:12 memory_monitor_summary.json
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas    355875 Oct 12 10:12 log.46676269._070056.job.log.tgz.1
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas      7785 Oct 12 10:12 heartbeat.json
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas       823 Oct 12 10:13 pilotlog.txt
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:13 boinc_mmap_file
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas    796241 Oct 12 10:13 log.46676269._070056.job.log.1
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas       357 Oct 12 10:13 output.list
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:13 runtime_log
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas   1167360 Oct 12 10:13 result.tar.gz
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas       656 Oct 12 10:13 WZhLDmRl1R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmb5SMDmyVs2So.diag
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 10:13 runtime_log.err
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas        27 Oct 12 10:13 wrapper_checkpoint.txt
[2025-10-12 10:13:14] -rw-r--r--. 1 boincer umatlas     22195 Oct 12 10:13 stderr.txt
[2025-10-12 10:13:14] HITS file was successfully produced:
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas 199295160 Oct 12 10:11 shared/HITS.pool.root.1
[2025-10-12 10:13:14]  *** Contents of shared directory: ***
[2025-10-12 10:13:14] total 411668
[2025-10-12 10:13:14] -rw-r--r--. 2 boincer umatlas 220483396 Oct 12 08:39 ATLAS.root_0
[2025-10-12 10:13:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:39 start_atlas.sh
[2025-10-12 10:13:14] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 08:39 input.tar.gz
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas 199295160 Oct 12 10:11 HITS.pool.root.1
[2025-10-12 10:13:14] -rw-------. 1 boincer umatlas   1167360 Oct 12 10:13 result.tar.gz
10:13:16 (3188388): run_atlas exited; CPU time 35903.633594
10:13:16 (3188388): called boinc_finish(0)

</stderr_txt>
]]>

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