Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:59:39 (4490): wrapper (7.7.26015): starting
16:59:39 (4490): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:59:39] Arguments: --nthreads 8
[2025-10-12 16:59:39] Threads: 8
[2025-10-12 16:59:39] Checking for CVMFS
[2025-10-12 16:59:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:59:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:59:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:59:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:59:42] 2.11.2.0 20781 220547 139136 151623 1 60 19867417 25165825 4632 130560 0 114977732 99.871 66776338 3261 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 16:59:42] CVMFS is ok
[2025-10-12 16:59:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:59:42] Checking for apptainer binary...
[2025-10-12 16:59:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:59:42] Running /usr/bin/apptainer --version
[2025-10-12 16:59:42] apptainer version 1.3.2-1.el7
[2025-10-12 16:59:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:59:55] cg-vwn441.simple-grid.lan
[2025-10-12 16:59:55] apptainer works
[2025-10-12 16:59:55] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:59:55] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:59:55] Starting ATLAS job with PandaID=6839588779
[2025-10-12 16:59:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:05:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:05:11] 2025-10-12 19:04:29,724 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:05:11] 2025-10-12 19:04:29,724 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:05:11] 2025-10-12 19:04:29,729 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:05:11] 2025-10-12 19:04:29,730 | INFO     | sum of square deviations: 3723716330.0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,732 | INFO     | sum of deviations: -987690711.0000267
[2025-10-12 21:05:11] 2025-10-12 19:04:29,732 | INFO     | mean x: 1760288861.0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,732 | INFO     | mean y: 2518779.655021834
[2025-10-12 21:05:11] 2025-10-12 19:04:29,732 | INFO     | -- intersect: 469423560.419167
[2025-10-12 21:05:11] 2025-10-12 19:04:29,732 | INFO     | intersect: 469423560.419167
[2025-10-12 21:05:11] 2025-10-12 19:04:29,733 | INFO     | chi2: 5.708587433199288
[2025-10-12 21:05:11] 2025-10-12 19:04:29,733 | INFO     | sum of square deviations: 3485088600.0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,735 | INFO     | sum of deviations: 15188425136.000032
[2025-10-12 21:05:11] 2025-10-12 19:04:29,736 | INFO     | mean x: 1760288708.5
[2025-10-12 21:05:11] 2025-10-12 19:04:29,736 | INFO     | mean y: 2528946.8303571427
[2025-10-12 21:05:11] 2025-10-12 19:04:29,736 | INFO     | -- intersect: -7669015835.933109
[2025-10-12 21:05:11] 2025-10-12 19:04:29,736 | INFO     | intersect: -7669015835.933109
[2025-10-12 21:05:11] 2025-10-12 19:04:29,736 | INFO     | chi2: 4.988454051094135
[2025-10-12 21:05:11] 2025-10-12 19:04:29,737 | INFO     | current chi2=4.988454051094135 (change=12.614913768633743 %)
[2025-10-12 21:05:11] 2025-10-12 19:04:29,737 | INFO     | right removable region: 223
[2025-10-12 21:05:11] 2025-10-12 19:04:29,737 | INFO     | sum of square deviations: 3485088600.0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,739 | INFO     | sum of deviations: -77757060083.0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,739 | INFO     | mean x: 1760289013.5
[2025-10-12 21:05:11] 2025-10-12 19:04:29,739 | INFO     | mean y: 2567754.0446428573
[2025-10-12 21:05:11] 2025-10-12 19:04:29,739 | INFO     | -- intersect: 39277006454.44505
[2025-10-12 21:05:11] 2025-10-12 19:04:29,739 | INFO     | intersect: 39277006454.44505
[2025-10-12 21:05:11] 2025-10-12 19:04:29,740 | INFO     | chi2: 1.4296485680387252
[2025-10-12 21:05:11] 2025-10-12 19:04:29,740 | INFO     | current chi2=1.4296485680387252 (change=74.9561763786895 %)
[2025-10-12 21:05:11] 2025-10-12 19:04:29,740 | INFO     | sum of square deviations: 3256879670.0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,742 | INFO     | sum of deviations: -95166169906.00002
[2025-10-12 21:05:11] 2025-10-12 19:04:29,742 | INFO     | mean x: 1760289166.0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,742 | INFO     | mean y: 2579281.97716895
[2025-10-12 21:05:11] 2025-10-12 19:04:29,742 | INFO     | -- intersect: 51438307595.28236
[2025-10-12 21:05:11] 2025-10-12 19:04:29,742 | INFO     | intersect: 51438307595.28236
[2025-10-12 21:05:11] 2025-10-12 19:04:29,743 | INFO     | chi2: 1.014578026500242
[2025-10-12 21:05:11] 2025-10-12 19:04:29,743 | INFO     | current chi2=1.014578026500242 (change=29.033047059103556 %)
[2025-10-12 21:05:11] 2025-10-12 19:04:29,743 | INFO     | sum of square deviations: 3038856977.5
[2025-10-12 21:05:11] 2025-10-12 19:04:29,745 | INFO     | sum of deviations: -95084441282.50002
[2025-10-12 21:05:11] 2025-10-12 19:04:29,745 | INFO     | mean x: 1760289318.5
[2025-10-12 21:05:11] 2025-10-12 19:04:29,745 | INFO     | mean y: 2579188.7056074766
[2025-10-12 21:05:11] 2025-10-12 19:04:29,745 | INFO     | -- intersect: 55081224740.10692
[2025-10-12 21:05:11] 2025-10-12 19:04:29,745 | INFO     | intersect: 55081224740.10692
[2025-10-12 21:05:11] 2025-10-12 19:04:29,746 | INFO     | chi2: 0.983398941205269
[2025-10-12 21:05:11] 2025-10-12 19:04:29,746 | INFO     | current chi2=0.983398941205269 (change=3.0731086698698076 %)
[2025-10-12 21:05:11] 2025-10-12 19:04:29,746 | INFO     | left removable region: 30
[2025-10-12 21:05:11] 2025-10-12 19:04:29,746 | INFO     | sum of square deviations: 2229146912.0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,748 | INFO     | sum of deviations: -62592831695.0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,748 | INFO     | mean x: 1760289593.0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,748 | INFO     | mean y: 2579781.6269430052
[2025-10-12 21:05:11] 2025-10-12 19:04:29,748 | INFO     | -- intersect: 49430237346.93911
[2025-10-12 21:05:11] 2025-10-12 19:04:29,748 | INFO     | intersect: 49430237346.93911
[2025-10-12 21:05:11] 2025-10-12 19:04:29,749 | INFO     | chi2: 0.1926921367544769
[2025-10-12 21:05:11] 2025-10-12 19:04:29,749 | INFO     | -- intersect: 49430237346.93911
[2025-10-12 21:05:11] 2025-10-12 19:04:29,749 | INFO     | current memory leak: -28.08 B/s (using 193 data points, chi2=0.19)
[2025-10-12 21:05:11] 2025-10-12 19:04:29,750 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 21:05:11] 2025-10-12 19:04:29,750 | INFO     | ..............................
[2025-10-12 21:05:11] 2025-10-12 19:04:29,750 | INFO     | . Timing measurements:
[2025-10-12 21:05:11] 2025-10-12 19:04:29,750 | INFO     | . get job = 0 s
[2025-10-12 21:05:11] 2025-10-12 19:04:29,750 | INFO     | . initial setup = 6 s
[2025-10-12 21:05:11] 2025-10-12 19:04:29,750 | INFO     | . payload setup = 129 s
[2025-10-12 21:05:11] 2025-10-12 19:04:29,751 | INFO     | . stage-in = 0 s
[2025-10-12 21:05:11] 2025-10-12 19:04:29,751 | INFO     | . payload execution = 14093 s
[2025-10-12 21:05:11] 2025-10-12 19:04:29,751 | INFO     | . stage-out = 4 s
[2025-10-12 21:05:11] 2025-10-12 19:04:29,751 | INFO     | . log creation = 1 s
[2025-10-12 21:05:11] 2025-10-12 19:04:29,751 | INFO     | ..............................
[2025-10-12 21:05:11] 2025-10-12 19:04:29,837 | INFO     | time since job start (14452s) is within the limit (172800.0s)
[2025-10-12 21:05:11] 2025-10-12 19:04:29,887 | INFO     | 
[2025-10-12 21:05:11] 2025-10-12 19:04:29,887 | INFO     | job summary report
[2025-10-12 21:05:11] 2025-10-12 19:04:29,887 | INFO     | --------------------------------------------------
[2025-10-12 21:05:11] 2025-10-12 19:04:29,887 | INFO     | PanDA job id: 6839588779
[2025-10-12 21:05:11] 2025-10-12 19:04:29,887 | INFO     | task id: 46676269
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | errors: (none)
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | pilot state: finished 
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | transexitcode: 0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | exeerrorcode: 0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | exeerrordiag: 
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | exitcode: 0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | exitmsg: OK
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | cpuconsumptiontime: 53062 s
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | nevents: 400
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | neventsw: 0
[2025-10-12 21:05:11] 2025-10-12 19:04:29,888 | INFO     | pid: 14844
[2025-10-12 21:05:11] 2025-10-12 19:04:29,889 | INFO     | pgrp: 14844
[2025-10-12 21:05:11] 2025-10-12 19:04:29,889 | INFO     | corecount: 8
[2025-10-12 21:05:11] 2025-10-12 19:04:29,889 | INFO     | event service: False
[2025-10-12 21:05:11] 2025-10-12 19:04:29,889 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348885, 12: 2348913, 23: 2348941, 34: 2348969, 44: 2349125, 55: 2349153, 66: 2349181, 77: 2349209, 87: 2349265, 97: 2349835, 98
[2025-10-12 21:05:11] 2025-10-12 19:04:29,889 | INFO     | --------------------------------------------------
[2025-10-12 21:05:11] 2025-10-12 19:04:29,889 | INFO     | 
[2025-10-12 21:05:11] 2025-10-12 19:04:29,889 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-12 21:05:11] 2025-10-12 19:04:29,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,922 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,924 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:05:11] 2025-10-12 19:04:29,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:05:11] 2025-10-12 19:04:29,924 | INFO     | job 6839588779 has completed (purged errors)
[2025-10-12 21:05:11] 2025-10-12 19:04:29,924 | INFO     | overall cleanup function is called
[2025-10-12 21:05:11] 2025-10-12 19:04:30,934 | INFO     | --- collectZombieJob: --- 10, [14844]
[2025-10-12 21:05:11] 2025-10-12 19:04:30,934 | INFO     | zombie collector waiting for pid 14844
[2025-10-12 21:05:11] 2025-10-12 19:04:30,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:05:11] 2025-10-12 19:04:30,934 | INFO     | collected zombie processes
[2025-10-12 21:05:11] 2025-10-12 19:04:30,934 | INFO     | will attempt to kill all subprocesses of pid=14844
[2025-10-12 21:05:11] 2025-10-12 19:04:31,049 | INFO     | process IDs to be killed: [14844] (in reverse order)
[2025-10-12 21:05:11] 2025-10-12 19:04:31,138 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:05:11] 2025-10-12 19:04:31,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:05:11] 2025-10-12 19:04:31,141 | INFO     | did not find any defunct processes belonging to 14844
[2025-10-12 21:05:11] 2025-10-12 19:04:31,145 | INFO     | did not find any defunct processes belonging to 14844
[2025-10-12 21:05:11] 2025-10-12 19:04:31,145 | INFO     | ready for new job
[2025-10-12 21:05:11] 2025-10-12 19:04:31,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:05:11] 2025-10-12 19:04:31,148 | INFO     | ***************************************
[2025-10-12 21:05:11] 2025-10-12 19:04:31,148 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:05:11] 2025-10-12 19:04:31,148 | INFO     | ***************************************
[2025-10-12 21:05:11] 2025-10-12 19:04:31,148 | INFO     | 
[2025-10-12 21:05:11] 2025-10-12 19:04:31,149 | INFO     | pilot is running in a VM
[2025-10-12 21:05:11] 2025-10-12 19:04:31,149 | INFO     | architecture information:
[2025-10-12 21:05:11] 2025-10-12 19:04:31,149 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:05:11] 2025-10-12 19:04:31,188 | INFO     | cat /etc/os-release:
[2025-10-12 21:05:11] NAME="CentOS Linux"
[2025-10-12 21:05:11] VERSION="7 (Core)"
[2025-10-12 21:05:11] ID="centos"
[2025-10-12 21:05:11] ID_LIKE="rhel fedora"
[2025-10-12 21:05:11] VERSION_ID="7"
[2025-10-12 21:05:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:05:11] ANSI_COLOR="0;31"
[2025-10-12 21:05:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:05:11] HOME_URL="https://www.centos.org/"
[2025-10-12 21:05:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:05:11] 
[2025-10-12 21:05:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:05:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:05:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:05:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:05:11] 
[2025-10-12 21:05:11] 2025-10-12 19:04:31,188 | INFO     | ***************************************
[2025-10-12 21:05:11] 2025-10-12 19:04:31,692 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-12 21:05:11] 2025-10-12 19:04:31,730 | INFO     | sufficient remaining disk space (494778974208 B)
[2025-10-12 21:05:11] 2025-10-12 19:04:31,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:05:11] 2025-10-12 19:04:31,730 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:05:11] 2025-10-12 19:04:31,730 | INFO     | update_server=False
[2025-10-12 21:05:11] 2025-10-12 19:04:31,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:05:11] 2025-10-12 19:04:31,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:05:11] 2025-10-12 19:04:31,731 | INFO     | aborting loop
[2025-10-12 21:05:11] 2025-10-12 19:04:31,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:05:11] 2025-10-12 19:04:31,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:05:11] 2025-10-12 19:04:31,732 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 21:05:11] 2025-10-12 19:04:31,732 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:05:11] 2025-10-12 19:04:31,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:05:11] 2025-10-12 19:04:31,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:05:11] 2025-10-12 19:04:32,021 | INFO     | all data control threads have been joined
[2025-10-12 21:05:11] 2025-10-12 19:04:32,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:05:11] 2025-10-12 19:04:32,737 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:32,737 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:32,738 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:33,027 | INFO     | [data] control thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:33,062 | INFO     | [job] validate thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:33,127 | INFO     | all job control threads have been joined
[2025-10-12 21:05:11] 2025-10-12 19:04:33,196 | INFO     | all payload control threads have been joined
[2025-10-12 21:05:11] 2025-10-12 19:04:33,616 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:33,627 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:33,715 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:33,812 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:33,910 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:34,097 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:34,133 | INFO     | [job] control thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:34,153 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:34,202 | INFO     | [payload] control thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:34,522 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:04:35,740 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:05:11] 2025-10-12 19:05:01,959 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:05:11] 2025-10-12 19:05:02,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731972273984)>', '<ExcThread(monitor, started 139731274798848)>']
[2025-10-12 21:05:11] 2025-10-12 19:05:02,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:05:11] 2025-10-12 19:05:02,917 | INFO     | [monitor] control thread has ended
[2025-10-12 21:05:11] 2025-10-12 19:05:07,227 | INFO     | all workflow threads have been joined
[2025-10-12 21:05:11] 2025-10-12 19:05:07,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:05:11] 2025-10-12 19:05:07,227 | INFO     | traces error code: 0
[2025-10-12 21:05:11] 2025-10-12 19:05:07,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:05:11] 2025-10-12 19:05:07,448 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:05:11] 2025-10-12 19:05:07,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:05:11] 2025-10-12 19:05:07,499 [wrapper] pilotpid: 8306
[2025-10-12 21:05:11] 2025-10-12 19:05:07,509 [wrapper] Pilot exit status: 0
[2025-10-12 21:05:11] 2025-10-12 19:05:07,986 [wrapper] pandaids: 6839588779
[2025-10-12 21:05:11] 2025-10-12 19:05:08,528 [wrapper] cleanup supervisor_pilot 21217 8307
[2025-10-12 21:05:11] 2025-10-12 19:05:08,609 [wrapper] Test setup, not cleaning
[2025-10-12 21:05:11] 2025-10-12 19:05:08,622 [wrapper] apfmon messages muted
[2025-10-12 21:05:11] 2025-10-12 19:05:08,661 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:05:11] 2025-10-12 19:05:08,717 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:05:11]  *** Error codes and diagnostics ***
[2025-10-12 21:05:11]     "exeErrorCode": 0,
[2025-10-12 21:05:11]     "exeErrorDiag": "",
[2025-10-12 21:05:11]     "pilotErrorCode": 0,
[2025-10-12 21:05:11]     "pilotErrorDiag": "",
[2025-10-12 21:05:11]  *** Listing of results directory ***
[2025-10-12 21:05:11] total 410396
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc    557409 Oct 12 07:26 pilot3.tar.gz
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc      5112 Oct 12 07:31 queuedata.json
[2025-10-12 21:05:11] -rwx------. 1 boinc boinc     36292 Oct 12 07:31 runpilot2-wrapper.sh
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:05:11] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:59 run_atlas
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:59 job.xml
[2025-10-12 21:05:11] -rw-r--r--. 2 boinc boinc 223059321 Oct 12 16:59 EVNT.46676267._004322.pool.root.1
[2025-10-12 21:05:11] -rw-r--r--. 2 boinc boinc    569683 Oct 12 16:59 input.tar.gz
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc      6391 Oct 12 16:59 init_data.xml
[2025-10-12 21:05:11] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:59 start_atlas.sh
[2025-10-12 21:05:11] drwxrwx--x. 2 boinc boinc        68 Oct 12 16:59 shared
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:59 boinc_lockfile
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc      2550 Oct 12 16:59 pandaJob.out
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc    975528 Oct 12 17:03 agis_schedconf.cvmfs.json
[2025-10-12 21:05:11] drwx------. 5 boinc boinc      4096 Oct 12 17:03 pilot3
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc 188544198 Oct 12 21:03 HITS.46676269._071971.pool.root.1
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc       531 Oct 12 21:03 boinc_task_state.xml
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc      1019 Oct 12 21:03 memory_monitor_summary.json
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc   1560580 Oct 12 21:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc    445672 Oct 12 21:03 log.46676269._071971.job.log.tgz.1
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc        95 Oct 12 21:04 pilot_heartbeat.json
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc      7787 Oct 12 21:04 heartbeat.json
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc      4615 Oct 12 21:05 pilotlog.txt
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc      8192 Oct 12 21:05 boinc_mmap_file
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc   1929408 Oct 12 21:05 log.46676269._071971.job.log.1
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc        28 Oct 12 21:05 wrapper_checkpoint.txt
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc       357 Oct 12 21:05 output.list
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc       620 Oct 12 21:05 runtime_log
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc   2396160 Oct 12 21:05 result.tar.gz
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc       657 Oct 12 21:05 WSkLDmuq3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrkiNDmOP5zpm.diag
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc      8703 Oct 12 21:05 runtime_log.err
[2025-10-12 21:05:11] -rw-r--r--. 1 boinc boinc     20541 Oct 12 21:05 stderr.txt
[2025-10-12 21:05:11] HITS file was successfully produced:
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc 188544198 Oct 12 21:03 shared/HITS.pool.root.1
[2025-10-12 21:05:11]  *** Contents of shared directory: ***
[2025-10-12 21:05:11] total 404876
[2025-10-12 21:05:11] -rw-r--r--. 2 boinc boinc 223059321 Oct 12 16:59 ATLAS.root_0
[2025-10-12 21:05:11] -rw-r--r--. 2 boinc boinc    569683 Oct 12 16:59 input.tar.gz
[2025-10-12 21:05:11] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:59 start_atlas.sh
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc 188544198 Oct 12 21:03 HITS.pool.root.1
[2025-10-12 21:05:11] -rw-------. 1 boinc boinc   2396160 Oct 12 21:05 result.tar.gz
21:05:12 (4490): run_atlas exited; CPU time 53272.148821
21:05:12 (4490): called boinc_finish(0)

</stderr_txt>
]]>

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