Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:47:01 (4185423): wrapper (7.7.26015): starting
06:47:01 (4185423): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 06:47:01] Arguments: --nthreads 8
[2025-10-12 06:47:01] Threads: 8
[2025-10-12 06:47:01] Checking for CVMFS
[2025-10-12 06:47:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:47:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:47:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:47:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:47:03] 2.13.2.0 2815078 129144 428584 151617 1 158 17444845 32947200 36564 16776704 0 261990619 99.643 248748581 21396 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 06:47:03] CVMFS is ok
[2025-10-12 06:47:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:47:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:47:03] Further information can be found at the LHC@home message board.
[2025-10-12 06:47:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:47:03] Checking for apptainer binary...
[2025-10-12 06:47:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:47:03] Running /usr/bin/apptainer --version
[2025-10-12 06:47:03] apptainer version 1.4.3-1.el9
[2025-10-12 06:47:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:47:04] c6-6-8-2.aglt2.org
[2025-10-12 06:47:04] apptainer works
[2025-10-12 06:47:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 06:47:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 06:47:04] Starting ATLAS job with PandaID=6839588808
[2025-10-12 06:47:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:35:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:35:54] 2025-10-12 17:34:52,922 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:35:54] 2025-10-12 17:34:52,922 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:35:54] 2025-10-12 17:34:52,930 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:35:54] 2025-10-12 17:34:52,930 | INFO     | sum of square deviations: 19549846650.83688
[2025-10-12 13:35:54] 2025-10-12 17:34:52,934 | INFO     | sum of deviations: -127546377318.67838
[2025-10-12 13:35:54] 2025-10-12 17:34:52,934 | INFO     | mean x: 1760278325.1432161
[2025-10-12 13:35:54] 2025-10-12 17:34:52,935 | INFO     | mean y: 2098049.7487437185
[2025-10-12 13:35:54] 2025-10-12 17:34:52,935 | INFO     | -- intersect: 11486439970.91654
[2025-10-12 13:35:54] 2025-10-12 17:34:52,935 | INFO     | intersect: 11486439970.91654
[2025-10-12 13:35:54] 2025-10-12 17:34:52,935 | INFO     | chi2: 4.519590465899266
[2025-10-12 13:35:54] 2025-10-12 17:34:52,936 | INFO     | sum of square deviations: 18822318831.83726
[2025-10-12 13:35:54] 2025-10-12 17:34:52,940 | INFO     | sum of deviations: -54946556209.997475
[2025-10-12 13:35:54] 2025-10-12 17:34:52,941 | INFO     | mean x: 1760278172.6463103
[2025-10-12 13:35:54] 2025-10-12 17:34:52,941 | INFO     | mean y: 2113220.2086513997
[2025-10-12 13:35:54] 2025-10-12 17:34:52,941 | INFO     | -- intersect: 5140758698.625568
[2025-10-12 13:35:54] 2025-10-12 17:34:52,941 | INFO     | intersect: 5140758698.625568
[2025-10-12 13:35:54] 2025-10-12 17:34:52,941 | INFO     | chi2: 2.433204542678303
[2025-10-12 13:35:54] 2025-10-12 17:34:52,941 | INFO     | current chi2=2.433204542678303 (change=46.163163210537334 %)
[2025-10-12 13:35:54] 2025-10-12 17:34:52,942 | INFO     | sum of square deviations: 18112973430.48457
[2025-10-12 13:35:54] 2025-10-12 17:34:52,946 | INFO     | sum of deviations: -28546783878.958725
[2025-10-12 13:35:54] 2025-10-12 17:34:52,946 | INFO     | mean x: 1760278020.1391752
[2025-10-12 13:35:54] 2025-10-12 17:34:52,946 | INFO     | mean y: 2118873.6288659796
[2025-10-12 13:35:54] 2025-10-12 17:34:52,946 | INFO     | -- intersect: 2776388730.5714025
[2025-10-12 13:35:54] 2025-10-12 17:34:52,946 | INFO     | intersect: 2776388730.5714025
[2025-10-12 13:35:54] 2025-10-12 17:34:52,947 | INFO     | chi2: 2.152422034301649
[2025-10-12 13:35:54] 2025-10-12 17:34:52,947 | INFO     | current chi2=2.152422034301649 (change=11.539617958611405 %)
[2025-10-12 13:35:54] 2025-10-12 17:34:52,947 | INFO     | right removable region: 387
[2025-10-12 13:35:54] 2025-10-12 17:34:52,947 | INFO     | sum of square deviations: 18822210741.241665
[2025-10-12 13:35:54] 2025-10-12 17:34:52,952 | INFO     | sum of deviations: -191227820871.06104
[2025-10-12 13:35:54] 2025-10-12 17:34:52,952 | INFO     | mean x: 1760278477.6513994
[2025-10-12 13:35:54] 2025-10-12 17:34:52,952 | INFO     | mean y: 2111344.6564885494
[2025-10-12 13:35:54] 2025-10-12 17:34:52,952 | INFO     | -- intersect: 17885994488.62452
[2025-10-12 13:35:54] 2025-10-12 17:34:52,953 | INFO     | intersect: 17885994488.62452
[2025-10-12 13:35:54] 2025-10-12 17:34:52,953 | INFO     | chi2: 2.76535742501397
[2025-10-12 13:35:54] 2025-10-12 17:34:52,953 | INFO     | current chi2=2.76535742501397 (change=38.81398224288569 %)
[2025-10-12 13:35:54] 2025-10-12 17:34:52,954 | INFO     | sum of square deviations: 18112854244.09266
[2025-10-12 13:35:54] 2025-10-12 17:34:52,957 | INFO     | sum of deviations: -201576038950.16492
[2025-10-12 13:35:54] 2025-10-12 17:34:52,958 | INFO     | mean x: 1760278630.1597939
[2025-10-12 13:35:54] 2025-10-12 17:34:52,958 | INFO     | mean y: 2113556.93814433
[2025-10-12 13:35:54] 2025-10-12 17:34:52,958 | INFO     | -- intersect: 19592068234.123165
[2025-10-12 13:35:54] 2025-10-12 17:34:52,958 | INFO     | intersect: 19592068234.123165
[2025-10-12 13:35:54] 2025-10-12 17:34:52,958 | INFO     | chi2: 2.6666087982030646
[2025-10-12 13:35:54] 2025-10-12 17:34:52,958 | INFO     | current chi2=2.6666087982030646 (change=3.5709173041313673 %)
[2025-10-12 13:35:54] 2025-10-12 17:34:52,958 | INFO     | left removable region: 20
[2025-10-12 13:35:54] 2025-10-12 17:34:52,959 | INFO     | sum of square deviations: 15328103395.444016
[2025-10-12 13:35:54] 2025-10-12 17:34:52,962 | INFO     | sum of deviations: -86552343460.41966
[2025-10-12 13:35:54] 2025-10-12 17:34:52,962 | INFO     | mean x: 1760278599.667575
[2025-10-12 13:35:54] 2025-10-12 17:34:52,962 | INFO     | mean y: 2132875.258855586
[2025-10-12 13:35:54] 2025-10-12 17:34:52,962 | INFO     | -- intersect: 9941799513.320513
[2025-10-12 13:35:54] 2025-10-12 17:34:52,962 | INFO     | intersect: 9941799513.320513
[2025-10-12 13:35:54] 2025-10-12 17:34:52,963 | INFO     | chi2: 0.18319696236306715
[2025-10-12 13:35:54] 2025-10-12 17:34:52,963 | INFO     | -- intersect: 9941799513.320513
[2025-10-12 13:35:54] 2025-10-12 17:34:52,963 | INFO     | current memory leak: -5.65 B/s (using 367 data points, chi2=0.18)
[2025-10-12 13:35:54] 2025-10-12 17:34:52,964 | INFO     | could have reported an average CPU frequency of 2617 MHz (17 samples)
[2025-10-12 13:35:54] 2025-10-12 17:34:52,964 | INFO     | ..............................
[2025-10-12 13:35:54] 2025-10-12 17:34:52,964 | INFO     | . Timing measurements:
[2025-10-12 13:35:54] 2025-10-12 17:34:52,965 | INFO     | . get job = 0 s
[2025-10-12 13:35:54] 2025-10-12 17:34:52,965 | INFO     | . initial setup = 4 s
[2025-10-12 13:35:54] 2025-10-12 17:34:52,965 | INFO     | . payload setup = 38 s
[2025-10-12 13:35:54] 2025-10-12 17:34:52,965 | INFO     | . stage-in = 0 s
[2025-10-12 13:35:54] 2025-10-12 17:34:52,965 | INFO     | . payload execution = 24270 s
[2025-10-12 13:35:54] 2025-10-12 17:34:52,965 | INFO     | . stage-out = 3 s
[2025-10-12 13:35:54] 2025-10-12 17:34:52,965 | INFO     | . log creation = 0 s
[2025-10-12 13:35:54] 2025-10-12 17:34:52,965 | INFO     | ..............................
[2025-10-12 13:35:54] 2025-10-12 17:34:53,119 | INFO     | 
[2025-10-12 13:35:54] 2025-10-12 17:34:53,119 | INFO     | job summary report
[2025-10-12 13:35:54] 2025-10-12 17:34:53,119 | INFO     | --------------------------------------------------
[2025-10-12 13:35:54] 2025-10-12 17:34:53,119 | INFO     | PanDA job id: 6839588808
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | task id: 46676269
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | errors: (none)
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | pilot state: finished 
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | transexitcode: 0
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | exeerrorcode: 0
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | exeerrordiag: 
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | exitcode: 0
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | exitmsg: OK
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | cpuconsumptiontime: 49147 s
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | nevents: 400
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | neventsw: 0
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | pid: 6096
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | pgrp: 6096
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | corecount: 8
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | event service: False
[2025-10-12 13:35:54] 2025-10-12 17:34:53,120 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 13: 2348913, 24: 2348969, 25: 2349259, 35: 2349415, 24312: 2384601, 24313: 2384600, 24318: 2393654, 24321: 2393710, 243
[2025-10-12 13:35:54] 2025-10-12 17:34:53,121 | INFO     | --------------------------------------------------
[2025-10-12 13:35:54] 2025-10-12 17:34:53,121 | INFO     | 
[2025-10-12 13:35:54] 2025-10-12 17:34:53,121 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 13:35:54] 2025-10-12 17:34:53,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:35:54] 2025-10-12 17:34:53,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:35:54] 2025-10-12 17:34:53,233 | INFO     | job 6839588808 has completed (purged errors)
[2025-10-12 13:35:54] 2025-10-12 17:34:53,233 | INFO     | overall cleanup function is called
[2025-10-12 13:35:54] 2025-10-12 17:34:54,257 | INFO     | --- collectZombieJob: --- 10, [6096]
[2025-10-12 13:35:54] 2025-10-12 17:34:54,257 | INFO     | zombie collector waiting for pid 6096
[2025-10-12 13:35:54] 2025-10-12 17:34:54,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:35:54] 2025-10-12 17:34:54,257 | INFO     | collected zombie processes
[2025-10-12 13:35:54] 2025-10-12 17:34:54,257 | INFO     | will attempt to kill all subprocesses of pid=6096
[2025-10-12 13:35:54] 2025-10-12 17:34:54,953 | INFO     | process IDs to be killed: [6096] (in reverse order)
[2025-10-12 13:35:54] 2025-10-12 17:34:55,365 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:35:54] 2025-10-12 17:34:55,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:35:54] 2025-10-12 17:34:55,450 | INFO     | did not find any defunct processes belonging to 6096
[2025-10-12 13:35:54] 2025-10-12 17:34:55,561 | INFO     | did not find any defunct processes belonging to 6096
[2025-10-12 13:35:54] 2025-10-12 17:34:55,562 | INFO     | ready for new job
[2025-10-12 13:35:54] 2025-10-12 17:34:55,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:35:54] 2025-10-12 17:34:55,569 | INFO     | ***************************************
[2025-10-12 13:35:54] 2025-10-12 17:34:55,569 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:35:54] 2025-10-12 17:34:55,569 | INFO     | ***************************************
[2025-10-12 13:35:54] 2025-10-12 17:34:55,570 | INFO     | 
[2025-10-12 13:35:54] 2025-10-12 17:34:55,593 | INFO     | architecture information:
[2025-10-12 13:35:54] 2025-10-12 17:34:55,594 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:35:54] 2025-10-12 17:34:55,750 | INFO     | cat /etc/os-release:
[2025-10-12 13:35:54] NAME="CentOS Linux"
[2025-10-12 13:35:54] VERSION="7 (Core)"
[2025-10-12 13:35:54] ID="centos"
[2025-10-12 13:35:54] ID_LIKE="rhel fedora"
[2025-10-12 13:35:54] VERSION_ID="7"
[2025-10-12 13:35:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:35:54] ANSI_COLOR="0;31"
[2025-10-12 13:35:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:35:54] HOME_URL="https://www.centos.org/"
[2025-10-12 13:35:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:35:54] 
[2025-10-12 13:35:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:35:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:35:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:35:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:35:54] 
[2025-10-12 13:35:54] 2025-10-12 17:34:55,750 | INFO     | ***************************************
[2025-10-12 13:35:54] 2025-10-12 17:34:56,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 13:35:54] 2025-10-12 17:34:56,343 | INFO     | sufficient remaining disk space (73935093760 B)
[2025-10-12 13:35:54] 2025-10-12 17:34:56,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:35:54] 2025-10-12 17:34:56,344 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:35:54] 2025-10-12 17:34:56,344 | INFO     | update_server=False
[2025-10-12 13:35:54] 2025-10-12 17:34:56,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:35:54] 2025-10-12 17:34:56,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:35:54] 2025-10-12 17:34:56,344 | INFO     | aborting loop
[2025-10-12 13:35:54] 2025-10-12 17:34:56,751 | INFO     | all payload control threads have been joined
[2025-10-12 13:35:54] 2025-10-12 17:34:57,152 | INFO     | all job control threads have been joined
[2025-10-12 13:35:54] 2025-10-12 17:34:57,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:35:54] 2025-10-12 17:34:57,359 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:57,359 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:57,363 | INFO     | all data control threads have been joined
[2025-10-12 13:35:54] 2025-10-12 17:34:57,437 | INFO     | [job] validate thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:57,647 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:57,757 | INFO     | [payload] control thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:58,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:35:54] 2025-10-12 17:34:58,158 | INFO     | [job] control thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:58,195 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:58,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:35:54] 2025-10-12 17:34:58,383 | INFO     | [data] control thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:58,470 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:58,696 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:58,753 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:58,830 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:59,153 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:34:59,320 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:35:02,340 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:35:06,862 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:35:54] 2025-10-12 17:35:07,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:35:54] 2025-10-12 17:35:26,746 | INFO     | PID=4189920 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:35:54] 2025-10-12 17:35:26,746 | INFO     | .. there are 50 such processes running
[2025-10-12 13:35:54] 2025-10-12 17:35:26,746 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:35:54] 2025-10-12 17:35:26,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:35:54] 2025-10-12 17:35:26,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:35:54] 2025-10-12 17:35:47,666 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:35:54] 2025-10-12 17:35:48,233 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173041203008)>', '<ExcThread(monitor, started 140172532365056)>']
[2025-10-12 13:35:54] 2025-10-12 17:35:48,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:35:54] 2025-10-12 17:35:48,881 | INFO     | [monitor] control thread has ended
[2025-10-12 13:35:54] 2025-10-12 17:35:53,259 | INFO     | all workflow threads have been joined
[2025-10-12 13:35:54] 2025-10-12 17:35:53,259 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:35:54] 2025-10-12 17:35:53,259 | INFO     | traces error code: 0
[2025-10-12 13:35:54] 2025-10-12 17:35:53,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:35:54] 2025-10-12 17:35:53,697 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:35:54] 2025-10-12 17:35:53,700 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:35:54] 2025-10-12 17:35:53,702 [wrapper] pilotpid: 4189920
[2025-10-12 13:35:54] 2025-10-12 17:35:53,705 [wrapper] Pilot exit status: 0
[2025-10-12 13:35:54] 2025-10-12 17:35:53,800 [wrapper] pandaids: 6839588808
[2025-10-12 13:35:54] 2025-10-12 17:35:53,912 [wrapper] cleanup supervisor_pilot 1725659 4189921
[2025-10-12 13:35:54] 2025-10-12 17:35:53,916 [wrapper] Test setup, not cleaning
[2025-10-12 13:35:54] 2025-10-12 17:35:53,918 [wrapper] apfmon messages muted
[2025-10-12 13:35:54] 2025-10-12 17:35:53,921 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:35:54] 2025-10-12 17:35:53,923 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:35:54]  *** Error codes and diagnostics ***
[2025-10-12 13:35:54]     "exeErrorCode": 0,
[2025-10-12 13:35:54]     "exeErrorDiag": "",
[2025-10-12 13:35:54]     "pilotErrorCode": 0,
[2025-10-12 13:35:54]     "pilotErrorDiag": "",
[2025-10-12 13:35:54]  *** Listing of results directory ***
[2025-10-12 13:35:54] total 415396
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 01:26 pilot3.tar.gz
[2025-10-12 13:35:54] -rwx------ 1 boincer umatlas     36292 Oct 12 01:29 runpilot2-wrapper.sh
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 01:29 queuedata.json
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas       100 Oct 12 06:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:35:54] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 06:47 run_atlas
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas       105 Oct 12 06:47 job.xml
[2025-10-12 13:35:54] -rw-r--r-- 2 boincer umatlas 219500944 Oct 12 06:47 EVNT.46676267._004323.pool.root.1
[2025-10-12 13:35:54] drwxrwx--x 2 boincer umatlas      4096 Oct 12 06:47 shared
[2025-10-12 13:35:54] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 06:47 input.tar.gz
[2025-10-12 13:35:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:47 start_atlas.sh
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas         0 Oct 12 06:47 boinc_lockfile
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 06:47 pandaJob.out
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas    975520 Oct 12 06:47 agis_schedconf.cvmfs.json
[2025-10-12 13:35:54] drwx------ 5 boincer umatlas      4096 Oct 12 06:48 pilot3
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas      6857 Oct 12 13:28 init_data.xml
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas 194719265 Oct 12 13:31 HITS.46676269._072000.pool.root.1
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas       531 Oct 12 13:31 boinc_task_state.xml
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas      1044 Oct 12 13:34 memory_monitor_summary.json
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas   1560580 Oct 12 13:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas    586659 Oct 12 13:34 log.46676269._072000.job.log.tgz.1
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas        95 Oct 12 13:34 pilot_heartbeat.json
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas      7829 Oct 12 13:34 heartbeat.json
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas        28 Oct 12 13:35 wrapper_checkpoint.txt
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 13:35 boinc_mmap_file
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas      4896 Oct 12 13:35 pilotlog.txt
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas   3033428 Oct 12 13:35 log.46676269._072000.job.log.1
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas       357 Oct 12 13:35 output.list
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas       620 Oct 12 13:35 runtime_log
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas   3635200 Oct 12 13:35 result.tar.gz
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 13:35 runtime_log.err
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas       656 Oct 12 13:35 C6qKDmxo3R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhITMDmK59VQm.diag
[2025-10-12 13:35:54] -rw-r--r-- 1 boincer umatlas     20996 Oct 12 13:35 stderr.txt
[2025-10-12 13:35:54] HITS file was successfully produced:
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas 194719265 Oct 12 13:31 shared/HITS.pool.root.1
[2025-10-12 13:35:54]  *** Contents of shared directory: ***
[2025-10-12 13:35:54] total 408652
[2025-10-12 13:35:54] -rw-r--r-- 2 boincer umatlas 219500944 Oct 12 06:47 ATLAS.root_0
[2025-10-12 13:35:54] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 06:47 input.tar.gz
[2025-10-12 13:35:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:47 start_atlas.sh
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas 194719265 Oct 12 13:31 HITS.pool.root.1
[2025-10-12 13:35:54] -rw------- 1 boincer umatlas   3635200 Oct 12 13:35 result.tar.gz
13:35:55 (4185423): run_atlas exited; CPU time 50557.103164
13:35:55 (4185423): called boinc_finish(0)

</stderr_txt>
]]>

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