Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:04:55 (3071946): wrapper (7.7.26015): starting
03:04:55 (3071946): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 03:04:55] Arguments: --nthreads 3
[2025-10-13 03:04:55] Threads: 3
[2025-10-13 03:04:55] Checking for CVMFS
[2025-10-13 03:04:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:04:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:04:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:04:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:04:55] 2.9.2.0 1564373 5023 85628 151642 0 57 4804450 36864000 0 130560 0 3945404 99.991 174636 824 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 03:04:55] CVMFS is ok
[2025-10-13 03:04:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:04:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:04:55] Further information can be found at the LHC@home message board.
[2025-10-13 03:04:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:04:55] Checking for apptainer binary...
[2025-10-13 03:04:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:04:55] Running /usr/bin/apptainer --version
[2025-10-13 03:04:55] apptainer version 1.4.1-1.1
[2025-10-13 03:04:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:04:55] thA371
[2025-10-13 03:04:55] apptainer works
[2025-10-13 03:04:56] Set ATHENA_PROC_NUMBER=3
[2025-10-13 03:04:56] Set ATHENA_CORE_NUMBER=3
[2025-10-13 03:04:56] Starting ATLAS job with PandaID=6839588868
[2025-10-13 03:04:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:32:12]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:32:12] 2025-10-13 02:31:30,745 | INFO     | [job] control thread has finished
[2025-10-13 04:32:12] 2025-10-13 02:31:30,930 | INFO     | [payload] control thread has finished
[2025-10-13 04:32:12] 2025-10-13 02:31:31,242 | INFO     | [job] validate thread has finished
[2025-10-13 04:32:12] 2025-10-13 02:31:31,248 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:32:12] 2025-10-13 02:31:32,828 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:32:12] 2025-10-13 02:31:39,601 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:32:12] 2025-10-13 02:31:40,606 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:32:12] 2025-10-13 02:31:57,995 | INFO     | 5187s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 04:32:12] 2025-10-13 02:31:59,056 | INFO     | PID=3075663 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:32:12] 2025-10-13 02:31:59,056 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:32:12] 2025-10-13 02:31:59,056 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:32:12] 2025-10-13 02:31:59,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:32:12] 2025-10-13 02:32:06,791 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:32:12] 2025-10-13 02:32:06,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355406706496)>', '<ExcThread(monitor, started 140355051689728)>']
[2025-10-13 04:32:12] 2025-10-13 02:32:07,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:32:12] 2025-10-13 02:32:07,098 | INFO     | [monitor] control thread has ended
[2025-10-13 04:32:12] 2025-10-13 02:32:11,952 | INFO     | all workflow threads have been joined
[2025-10-13 04:32:12] 2025-10-13 02:32:11,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:32:12] 2025-10-13 02:32:11,952 | INFO     | traces error code: 0
[2025-10-13 04:32:12] 2025-10-13 02:32:11,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:32:12] 2025-10-13 02:32:12,002 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:32:12] 2025-10-13 02:32:12,004 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:32:12] 2025-10-13 02:32:12,007 [wrapper] pilotpid: 3075663
[2025-10-13 04:32:12] 2025-10-13 02:32:12,009 [wrapper] Pilot exit status: 0
[2025-10-13 04:32:12] 2025-10-13 02:32:12,016 [wrapper] pandaids: 6839588868
[2025-10-13 04:32:12] 2025-10-13 02:32:12,032 [wrapper] cleanup supervisor_pilot 3093998 3075664
[2025-10-13 04:32:12] 2025-10-13 02:32:12,034 [wrapper] Test setup, not cleaning
[2025-10-13 04:32:12] 2025-10-13 02:32:12,037 [wrapper] apfmon messages muted
[2025-10-13 04:32:12] 2025-10-13 02:32:12,039 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:32:12] 2025-10-13 02:32:12,041 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:32:12]  *** Error codes and diagnostics ***
[2025-10-13 04:32:12]     "exeErrorCode": 0,
[2025-10-13 04:32:12]     "exeErrorDiag": "",
[2025-10-13 04:32:12]     "pilotErrorCode": 0,
[2025-10-13 04:32:12]     "pilotErrorDiag": "",
[2025-10-13 04:32:12]  *** Listing of results directory ***
[2025-10-13 04:32:12] total 421136
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc    557409 Oct 12 07:26 pilot3.tar.gz
[2025-10-13 04:32:12] -rwx------ 1 boinc boinc     36292 Oct 12 07:33 runpilot2-wrapper.sh
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc      5112 Oct 12 07:33 queuedata.json
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:32:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:04 run_atlas
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:04 job.xml
[2025-10-13 04:32:12] -rw-r--r-- 2 boinc boinc 224061392 Oct 13 03:04 EVNT.46676267._004325.pool.root.1
[2025-10-13 04:32:12] -rw-r--r-- 2 boinc boinc    569677 Oct 13 03:04 input.tar.gz
[2025-10-13 04:32:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:04 start_atlas.sh
[2025-10-13 04:32:12] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:04 shared
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:04 boinc_setup_complete
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc      6438 Oct 13 03:04 init_data.xml
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:04 boinc_lockfile
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc      2550 Oct 13 03:04 pandaJob.out
[2025-10-13 04:32:12] -rw------- 1 boinc boinc    975603 Oct 13 03:05 agis_schedconf.cvmfs.json
[2025-10-13 04:32:12] -rw------- 1 boinc boinc   1560580 Oct 13 03:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:32:12] drwx------ 5 boinc boinc      4096 Oct 13 03:05 pilot3
[2025-10-13 04:32:12] -rw------- 1 boinc boinc 201257245 Oct 13 04:31 HITS.46676269._072060.pool.root.1
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc       529 Oct 13 04:31 boinc_task_state.xml
[2025-10-13 04:32:12] -rw------- 1 boinc boinc      1020 Oct 13 04:31 memory_monitor_summary.json
[2025-10-13 04:32:12] -rw------- 1 boinc boinc    261518 Oct 13 04:31 log.46676269._072060.job.log.tgz.1
[2025-10-13 04:32:12] -rw------- 1 boinc boinc      7759 Oct 13 04:31 heartbeat.json
[2025-10-13 04:32:12] -rw------- 1 boinc boinc        95 Oct 13 04:31 pilot_heartbeat.json
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:31 boinc_mmap_file
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:31 wrapper_checkpoint.txt
[2025-10-13 04:32:12] -rw------- 1 boinc boinc      4939 Oct 13 04:32 pilotlog.txt
[2025-10-13 04:32:12] -rw------- 1 boinc boinc    758437 Oct 13 04:32 log.46676269._072060.job.log.1
[2025-10-13 04:32:12] -rw------- 1 boinc boinc       357 Oct 13 04:32 output.list
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc       620 Oct 13 04:32 runtime_log
[2025-10-13 04:32:12] -rw------- 1 boinc boinc   1034240 Oct 13 04:32 result.tar.gz
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc      8777 Oct 13 04:32 runtime_log.err
[2025-10-13 04:32:12] -rw------- 1 boinc boinc       658 Oct 13 04:32 gZyMDm1s3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCliNDmoSzx0n.diag
[2025-10-13 04:32:12] -rw-r--r-- 1 boinc boinc      5529 Oct 13 04:32 stderr.txt
[2025-10-13 04:32:12] HITS file was successfully produced:
[2025-10-13 04:32:12] -rw------- 1 boinc boinc 201257245 Oct 13 04:31 shared/HITS.pool.root.1
[2025-10-13 04:32:12]  *** Contents of shared directory: ***
[2025-10-13 04:32:12] total 416948
[2025-10-13 04:32:12] -rw-r--r-- 2 boinc boinc 224061392 Oct 13 03:04 ATLAS.root_0
[2025-10-13 04:32:12] -rw-r--r-- 2 boinc boinc    569677 Oct 13 03:04 input.tar.gz
[2025-10-13 04:32:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:04 start_atlas.sh
[2025-10-13 04:32:12] -rw------- 1 boinc boinc 201257245 Oct 13 04:31 HITS.pool.root.1
[2025-10-13 04:32:12] -rw------- 1 boinc boinc   1034240 Oct 13 04:32 result.tar.gz
04:32:13 (3071946): run_atlas exited; CPU time 14841.835149
04:32:13 (3071946): called boinc_finish(0)

</stderr_txt>
]]>

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