Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:43:00 (2112515): wrapper (7.7.26015): starting
03:43:00 (2112515): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 03:43:00] Arguments: --nthreads 12
[2025-10-13 03:43:00] Threads: 12
[2025-10-13 03:43:00] Checking for CVMFS
[2025-10-13 03:43:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:43:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:43:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:43:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:43:00] 2.13.1.0 2584362 12685 83836 151643 2 57 2807627 4097024 0 130560 0 22679946 99.996 437110 4006 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-13 03:43:00] CVMFS is ok
[2025-10-13 03:43:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:43:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:43:00] Further information can be found at the LHC@home message board.
[2025-10-13 03:43:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:43:00] Checking for apptainer binary...
[2025-10-13 03:43:00] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-13 03:43:00] apptainer is not installed, using version from CVMFS
[2025-10-13 03:43:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:43:00] pckelar1.cern.ch
[2025-10-13 03:43:00] apptainer works
[2025-10-13 03:43:00] Set ATHENA_PROC_NUMBER=12
[2025-10-13 03:43:00] Set ATHENA_CORE_NUMBER=12
[2025-10-13 03:43:00] Starting ATLAS job with PandaID=6839475077
[2025-10-13 03:43:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:27:16]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:27:16]  storage_token=
[2025-10-13 04:27:16]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6839475077/log.46676269._071811.job.log.tgz.1
[2025-10-13 04:27:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/f9/log.46676269._071811.job.log.tgz.1
[2025-10-13 04:27:16]  workdir=None
[2025-10-13 04:27:16] ]
[2025-10-13 04:27:16] 2025-10-13 02:26:22,125 | INFO     | time since job start (2594s) is within the limit (172800.0s)
[2025-10-13 04:27:16] 2025-10-13 02:26:22,148 | INFO     | transferring file log.46676269._071811.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6839475077/log.46676269._071811.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 04:27:16] 2025-10-13 02:26:22,148 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6839475077/log.46676269._071811.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._071811.job
[2025-10-13 04:27:16] 2025-10-13 02:26:22,159 | INFO     | adding to output.list: log.46676269._071811.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/f9/log.46676269._071811.job.log.tg
[2025-10-13 04:27:16] 2025-10-13 02:26:22,160 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 04:27:16] 2025-10-13 02:26:22,160 | INFO     | summary of transferred files:
[2025-10-13 04:27:16] 2025-10-13 02:26:22,160 | INFO     |  -- lfn=log.46676269._071811.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 04:27:16] 2025-10-13 02:26:22,160 | INFO     | stage-out finished correctly
[2025-10-13 04:27:16] 2025-10-13 02:26:22,608 | WARNING  | process 2123794 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 04:27:16] 2025-10-13 02:26:22,608 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839475077/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:27:16] 2025-10-13 02:26:22,669 | INFO     | number of running child processes to parent process 2123794: 1
[2025-10-13 04:27:16] 2025-10-13 02:26:22,669 | INFO     | maximum number of monitored processes: 6
[2025-10-13 04:27:16] 2025-10-13 02:26:23,663 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 04:27:16] 2025-10-13 02:26:24,130 | INFO     | time since job start (2596s) is within the limit (172800.0s)
[2025-10-13 04:27:16] 2025-10-13 02:26:25,177 | INFO     | monitor loop #201: job 0:6839475077 is in state 'finished'
[2025-10-13 04:27:16] 2025-10-13 02:26:25,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:27:16] 2025-10-13 02:26:25,429 | INFO     | job 6839475077 has state=finished
[2025-10-13 04:27:16] 2025-10-13 02:26:25,429 | INFO     | preparing for final server update for job 6839475077 in state='finished'
[2025-10-13 04:27:16] 2025-10-13 02:26:25,430 | INFO     | this job has now completed (state=finished)
[2025-10-13 04:27:16] 2025-10-13 02:26:25,430 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 04:27:16] 2025-10-13 02:26:25,430 | INFO     | log transfer has been attempted: DONE
[2025-10-13 04:27:16] 2025-10-13 02:26:25,430 | INFO     | job 6839475077 has finished - writing final server update
[2025-10-13 04:27:16] 2025-10-13 02:26:25,430 | INFO     | total number of processed events: 400 (read)
[2025-10-13 04:27:16] 2025-10-13 02:26:25,431 | INFO     | executing command: lscpu
[2025-10-13 04:27:16] 2025-10-13 02:26:25,454 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 04:27:16] 2025-10-13 02:26:26,132 | INFO     | time since job start (2598s) is within the limit (172800.0s)
[2025-10-13 04:27:16] 2025-10-13 02:26:27,679 | INFO     | monitor loop #202: job 0:6839475077 is in state 'finished'
[2025-10-13 04:27:16] 2025-10-13 02:26:27,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:27:16] 2025-10-13 02:26:28,137 | INFO     | time since job start (2600s) is within the limit (172800.0s)
[2025-10-13 04:27:16] 2025-10-13 02:26:30,143 | INFO     | time since job start (2602s) is within the limit (172800.0s)
[2025-10-13 04:27:16] 2025-10-13 02:26:30,158 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 04:27:16] 2025-10-13 02:26:30,160 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2283.66905
[2025-10-13 04:27:16] 2025-10-13 02:26:30,162 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839475077/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:27:16] 2025-10-13 02:26:30,162 | INFO     | extracted standard info from prmon json
[2025-10-13 04:27:16] 2025-10-13 02:26:30,162 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:27:16] 2025-10-13 02:26:30,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:27:16] 2025-10-13 02:26:30,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:27:16] 2025-10-13 02:26:30,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:27:16] 2025-10-13 02:26:30,163 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:27:16] 2025-10-13 02:26:30,164 | INFO     | sum of square deviations: 14456085.0
[2025-10-13 04:27:16] 2025-10-13 02:26:30,164 | INFO     | sum of deviations: -3840014355.0
[2025-10-13 04:27:16] 2025-10-13 02:26:30,164 | INFO     | mean x: 1760321184.5
[2025-10-13 04:27:16] 2025-10-13 02:26:30,164 | INFO     | mean y: 2956529.3333333335
[2025-10-13 04:27:16] 2025-10-13 02:26:30,164 | INFO     | -- intersect: 467602491112.21686
[2025-10-13 04:27:16] 2025-10-13 02:26:30,164 | INFO     | intersect: 467602491112.21686
[2025-10-13 04:27:16] 2025-10-13 02:26:30,164 | INFO     | chi2: 0.05337822400181559
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | -- intersect: 467602491112.21686
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | current memory leak: -265.63 B/s (using 36 data points, chi2=0.05)
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | could have reported an average CPU frequency of 2432 MHz (5 samples)
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | ..............................
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | . Timing measurements:
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | . get job = 0 s
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | . initial setup = 1 s
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | . payload setup = 6 s
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | . stage-in = 0 s
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | . payload execution = 2568 s
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | . stage-out = 0 s
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | . log creation = 0 s
[2025-10-13 04:27:16] 2025-10-13 02:26:30,165 | INFO     | ..............................
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | 
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | job summary report
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | --------------------------------------------------
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | PanDA job id: 6839475077
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | task id: 46676269
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | errors: (none)
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | pilot state: finished 
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | transexitcode: 0
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | exeerrorcode: 0
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | exeerrordiag: 
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | exitcode: 0
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | exitmsg: OK
[2025-10-13 04:27:16] 2025-10-13 02:26:30,532 | INFO     | cpuconsumptiontime: 28121 s
[2025-10-13 04:27:16] 2025-10-13 02:26:30,533 | INFO     | nevents: 400
[2025-10-13 04:27:16] 2025-10-13 02:26:30,533 | INFO     | neventsw: 0
[2025-10-13 04:27:16] 2025-10-13 02:26:30,533 | INFO     | pid: 2123794
[2025-10-13 04:27:16] 2025-10-13 02:26:30,533 | INFO     | pgrp: 2123794
[2025-10-13 04:27:16] 2025-10-13 02:26:30,533 | INFO     | corecount: 12
[2025-10-13 04:27:16] 2025-10-13 02:26:30,533 | INFO     | event service: False
[2025-10-13 04:27:16] 2025-10-13 02:26:30,533 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 2578: 2374372, 2580: 2383370, 2581: 2383426, 2588: 2383780}
[2025-10-13 04:27:16] 2025-10-13 02:26:30,533 | INFO     | --------------------------------------------------
[2025-10-13 04:27:16] 2025-10-13 02:26:30,533 | INFO     | 
[2025-10-13 04:27:16] 2025-10-13 02:26:30,533 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 04:27:16] 2025-10-13 02:26:30,554 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:27:16] 2025-10-13 02:26:30,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,556 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:27:16] 2025-10-13 02:26:30,556 | INFO     | job 6839475077 has completed (purged errors)
[2025-10-13 04:27:16] 2025-10-13 02:26:30,556 | INFO     | overall cleanup function is called
[2025-10-13 04:27:16] 2025-10-13 02:26:31,560 | INFO     | --- collectZombieJob: --- 10, [2123794]
[2025-10-13 04:27:16] 2025-10-13 02:26:31,560 | INFO     | zombie collector waiting for pid 2123794
[2025-10-13 04:27:16] 2025-10-13 02:26:31,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:27:16] 2025-10-13 02:26:31,560 | INFO     | collected zombie processes
[2025-10-13 04:27:16] 2025-10-13 02:26:31,560 | INFO     | will attempt to kill all subprocesses of pid=2123794
[2025-10-13 04:27:16] 2025-10-13 02:26:31,639 | INFO     | process IDs to be killed: [2123794] (in reverse order)
[2025-10-13 04:27:16] 2025-10-13 02:26:31,671 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:27:16] 2025-10-13 02:26:31,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:27:16] 2025-10-13 02:26:31,673 | INFO     | did not find any defunct processes belonging to 2123794
[2025-10-13 04:27:16] 2025-10-13 02:26:31,675 | INFO     | did not find any defunct processes belonging to 2123794
[2025-10-13 04:27:16] 2025-10-13 02:26:31,675 | INFO     | ready for new job
[2025-10-13 04:27:16] 2025-10-13 02:26:31,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:27:16] 2025-10-13 02:26:31,676 | INFO     | ***************************************
[2025-10-13 04:27:16] 2025-10-13 02:26:31,676 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:27:16] 2025-10-13 02:26:31,676 | INFO     | ***************************************
[2025-10-13 04:27:16] 2025-10-13 02:26:31,676 | INFO     | 
[2025-10-13 04:27:16] 2025-10-13 02:26:31,677 | INFO     | architecture information:
[2025-10-13 04:27:16] 2025-10-13 02:26:31,677 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:27:16] 2025-10-13 02:26:31,686 | INFO     | cat /etc/os-release:
[2025-10-13 04:27:16] NAME="CentOS Linux"
[2025-10-13 04:27:16] VERSION="7 (Core)"
[2025-10-13 04:27:16] ID="centos"
[2025-10-13 04:27:16] ID_LIKE="rhel fedora"
[2025-10-13 04:27:16] VERSION_ID="7"
[2025-10-13 04:27:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:27:16] ANSI_COLOR="0;31"
[2025-10-13 04:27:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:27:16] HOME_URL="https://www.centos.org/"
[2025-10-13 04:27:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:27:16] 
[2025-10-13 04:27:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:27:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:27:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:27:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:27:16] 
[2025-10-13 04:27:16] 2025-10-13 02:26:31,687 | INFO     | ***************************************
[2025-10-13 04:27:16] 2025-10-13 02:26:32,190 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 04:27:16] 2025-10-13 02:26:32,202 | INFO     | sufficient remaining disk space (825150668800 B)
[2025-10-13 04:27:16] 2025-10-13 02:26:32,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:27:16] 2025-10-13 02:26:32,202 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:27:16] 2025-10-13 02:26:32,202 | INFO     | update_server=False
[2025-10-13 04:27:16] 2025-10-13 02:26:32,202 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:27:16] 2025-10-13 02:26:32,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:27:16] 2025-10-13 02:26:32,589 | INFO     | all data control threads have been joined
[2025-10-13 04:27:16] 2025-10-13 02:26:32,689 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 04:27:16] 2025-10-13 02:26:32,689 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 04:27:16] 2025-10-13 02:26:32,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:27:16] 2025-10-13 02:26:32,690 | INFO     | will abort loop
[2025-10-13 04:27:16] 2025-10-13 02:26:32,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:27:16] 2025-10-13 02:26:33,207 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:33,208 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:33,281 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:33,359 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:33,408 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:33,508 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:33,594 | INFO     | [data] control thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:33,647 | INFO     | all payload control threads have been joined
[2025-10-13 04:27:16] 2025-10-13 02:26:33,650 | INFO     | all job control threads have been joined
[2025-10-13 04:27:16] 2025-10-13 02:26:33,695 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:33,842 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:34,211 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:34,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:27:16] 2025-10-13 02:26:34,365 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:34,652 | INFO     | [payload] control thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:34,655 | INFO     | [job] control thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:34,672 | INFO     | [job] validate thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:34,724 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:26:38,223 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:27:16] 2025-10-13 02:27:03,318 | INFO     | PID=2116345 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:27:16] 2025-10-13 02:27:03,319 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:27:16] 2025-10-13 02:27:03,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:27:16] 2025-10-13 02:27:03,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:27:16] 2025-10-13 02:27:11,472 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:27:16] 2025-10-13 02:27:11,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431977641792)>', '<ExcThread(monitor, started 140431421576960)>']
[2025-10-13 04:27:16] 2025-10-13 02:27:12,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:27:16] 2025-10-13 02:27:12,363 | INFO     | [monitor] control thread has ended
[2025-10-13 04:27:16] 2025-10-13 02:27:16,583 | INFO     | all workflow threads have been joined
[2025-10-13 04:27:16] 2025-10-13 02:27:16,583 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:27:16] 2025-10-13 02:27:16,583 | INFO     | traces error code: 0
[2025-10-13 04:27:16] 2025-10-13 02:27:16,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:27:16] 2025-10-13 02:27:16,664 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:27:16] 2025-10-13 02:27:16,666 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:27:16] 2025-10-13 02:27:16,669 [wrapper] pilotpid: 2116345
[2025-10-13 04:27:16] 2025-10-13 02:27:16,671 [wrapper] Pilot exit status: 0
[2025-10-13 04:27:16] 2025-10-13 02:27:16,680 [wrapper] pandaids: 6839475077
[2025-10-13 04:27:16] 2025-10-13 02:27:16,700 [wrapper] cleanup supervisor_pilot 2133109 2116346
[2025-10-13 04:27:16] 2025-10-13 02:27:16,702 [wrapper] Test setup, not cleaning
[2025-10-13 04:27:16] 2025-10-13 02:27:16,704 [wrapper] apfmon messages muted
[2025-10-13 04:27:16] 2025-10-13 02:27:16,706 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:27:16] 2025-10-13 02:27:16,708 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:27:16]  *** Error codes and diagnostics ***
[2025-10-13 04:27:16]     "exeErrorCode": 0,
[2025-10-13 04:27:16]     "exeErrorDiag": "",
[2025-10-13 04:27:16]     "pilotErrorCode": 0,
[2025-10-13 04:27:16]     "pilotErrorDiag": "",
[2025-10-13 04:27:16]  *** Listing of results directory ***
[2025-10-13 04:27:16] total 410092
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:38 pilot3.tar.gz
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc      5112 Oct 12 07:21 queuedata.json
[2025-10-13 04:27:16] -rwx------ 1 boinc boinc     36292 Oct 12 07:21 runpilot2-wrapper.sh
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:27:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:42 run_atlas
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:42 job.xml
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc      6532 Oct 13 03:43 init_data.xml
[2025-10-13 04:27:16] -rw-r--r-- 2 boinc boinc 221681554 Oct 13 03:43 EVNT.46676267._004317.pool.root.1
[2025-10-13 04:27:16] drwxrwx--x 2 boinc boinc        68 Oct 13 03:43 shared
[2025-10-13 04:27:16] -rw-r--r-- 2 boinc boinc    569680 Oct 13 03:43 input.tar.gz
[2025-10-13 04:27:16] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:43 start_atlas.sh
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:43 boinc_lockfile
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc      2550 Oct 13 03:43 pandaJob.out
[2025-10-13 04:27:16] -rw------- 1 boinc boinc    975595 Oct 13 03:43 agis_schedconf.cvmfs.json
[2025-10-13 04:27:16] -rw------- 1 boinc boinc   1560580 Oct 13 03:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:27:16] drwx------ 5 boinc boinc      4096 Oct 13 03:43 pilot3
[2025-10-13 04:27:16] -rw------- 1 boinc boinc 192840075 Oct 13 04:25 HITS.46676269._071811.pool.root.1
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc       529 Oct 13 04:26 boinc_task_state.xml
[2025-10-13 04:27:16] -rw------- 1 boinc boinc      1020 Oct 13 04:26 memory_monitor_summary.json
[2025-10-13 04:27:16] -rw------- 1 boinc boinc    357372 Oct 13 04:26 log.46676269._071811.job.log.tgz.1
[2025-10-13 04:27:16] -rw------- 1 boinc boinc        95 Oct 13 04:26 pilot_heartbeat.json
[2025-10-13 04:27:16] -rw------- 1 boinc boinc      7798 Oct 13 04:26 heartbeat.json
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:27 boinc_mmap_file
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:27 wrapper_checkpoint.txt
[2025-10-13 04:27:16] -rw------- 1 boinc boinc      4935 Oct 13 04:27 pilotlog.txt
[2025-10-13 04:27:16] -rw------- 1 boinc boinc    403666 Oct 13 04:27 log.46676269._071811.job.log.1
[2025-10-13 04:27:16] -rw------- 1 boinc boinc       357 Oct 13 04:27 output.list
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc       620 Oct 13 04:27 runtime_log
[2025-10-13 04:27:16] -rw------- 1 boinc boinc    778240 Oct 13 04:27 result.tar.gz
[2025-10-13 04:27:16] -rw------- 1 boinc boinc       654 Oct 13 04:27 SCOODmvh3R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwHTMDmujye2m.diag
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc      8727 Oct 13 04:27 runtime_log.err
[2025-10-13 04:27:16] -rw-r--r-- 1 boinc boinc     22303 Oct 13 04:27 stderr.txt
[2025-10-13 04:27:16] HITS file was successfully produced:
[2025-10-13 04:27:16] -rw------- 1 boinc boinc 192840075 Oct 13 04:25 shared/HITS.pool.root.1
[2025-10-13 04:27:16]  *** Contents of shared directory: ***
[2025-10-13 04:27:16] total 406148
[2025-10-13 04:27:16] -rw-r--r-- 2 boinc boinc 221681554 Oct 13 03:43 ATLAS.root_0
[2025-10-13 04:27:16] -rw-r--r-- 2 boinc boinc    569680 Oct 13 03:43 input.tar.gz
[2025-10-13 04:27:16] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:43 start_atlas.sh
[2025-10-13 04:27:16] -rw------- 1 boinc boinc 192840075 Oct 13 04:25 HITS.pool.root.1
[2025-10-13 04:27:16] -rw------- 1 boinc boinc    778240 Oct 13 04:27 result.tar.gz
04:27:18 (2112515): run_atlas exited; CPU time 28124.771710
04:27:18 (2112515): called boinc_finish(0)

</stderr_txt>
]]>

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