Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:31:03 (2232): wrapper (7.7.26015): starting
12:31:03 (2232): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:31:03] Arguments: --nthreads 8
[2025-10-12 12:31:03] Threads: 8
[2025-10-12 12:31:03] Checking for CVMFS
[2025-10-12 12:31:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:31:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:31:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:31:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:31:09] 2.11.2.0 17186 220457 141420 151617 1 11 20249247 25165824 4632 130560 0 122340125 99.893 62900050 3165 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 12:31:09] CVMFS is ok
[2025-10-12 12:31:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:31:09] Checking for apptainer binary...
[2025-10-12 12:31:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:31:09] Running /usr/bin/apptainer --version
[2025-10-12 12:31:09] apptainer version 1.3.2-1.el7
[2025-10-12 12:31:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:31:17] cg-vwn311.simple-grid.lan
[2025-10-12 12:31:17] apptainer works
[2025-10-12 12:31:17] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:31:17] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:31:17] Starting ATLAS job with PandaID=6838990837
[2025-10-12 12:31:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:39:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:39:43] 2025-10-12 14:38:50,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:39:43] 2025-10-12 14:38:50,216 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:39:43] 2025-10-12 14:38:50,229 | INFO     | sum of square deviations: 4127772278.0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,231 | INFO     | sum of deviations: -12158641572.999996
[2025-10-12 16:39:43] 2025-10-12 14:38:50,232 | INFO     | mean x: 1760272569.0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,232 | INFO     | mean y: 2496440.0632911394
[2025-10-12 16:39:43] 2025-10-12 14:38:50,232 | INFO     | -- intersect: 5187502248.480832
[2025-10-12 16:39:43] 2025-10-12 14:38:50,232 | INFO     | intersect: 5187502248.480832
[2025-10-12 16:39:43] 2025-10-12 14:38:50,232 | INFO     | chi2: 2.4322638980641584
[2025-10-12 16:39:43] 2025-10-12 14:38:50,233 | INFO     | sum of square deviations: 3871990738.0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,235 | INFO     | sum of deviations: 3512124501.500001
[2025-10-12 16:39:43] 2025-10-12 14:38:50,235 | INFO     | mean x: 1760272416.5
[2025-10-12 16:39:43] 2025-10-12 14:38:50,235 | INFO     | mean y: 2505622.004310345
[2025-10-12 16:39:43] 2025-10-12 14:38:50,235 | INFO     | -- intersect: -1594165522.539183
[2025-10-12 16:39:43] 2025-10-12 14:38:50,235 | INFO     | intersect: -1594165522.539183
[2025-10-12 16:39:43] 2025-10-12 14:38:50,235 | INFO     | chi2: 1.6578867693037351
[2025-10-12 16:39:43] 2025-10-12 14:38:50,236 | INFO     | current chi2=1.6578867693037351 (change=31.837710101142846 %)
[2025-10-12 16:39:43] 2025-10-12 14:38:50,236 | INFO     | sum of square deviations: 3627000098.0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,238 | INFO     | sum of deviations: 3105215370.0000024
[2025-10-12 16:39:43] 2025-10-12 14:38:50,238 | INFO     | mean x: 1760272264.0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,238 | INFO     | mean y: 2505368.6872246694
[2025-10-12 16:39:43] 2025-10-12 14:38:50,238 | INFO     | -- intersect: -1504531946.4128153
[2025-10-12 16:39:43] 2025-10-12 14:38:50,238 | INFO     | intersect: -1504531946.4128153
[2025-10-12 16:39:43] 2025-10-12 14:38:50,239 | INFO     | chi2: 1.6575651949051806
[2025-10-12 16:39:43] 2025-10-12 14:38:50,239 | INFO     | current chi2=1.6575651949051806 (change=0.019396644240641712 %)
[2025-10-12 16:39:43] 2025-10-12 14:38:50,239 | INFO     | right removable region: 226
[2025-10-12 16:39:43] 2025-10-12 14:38:50,240 | INFO     | sum of square deviations: 3871990738.0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,241 | INFO     | sum of deviations: -47810346766.50001
[2025-10-12 16:39:43] 2025-10-12 14:38:50,242 | INFO     | mean x: 1760272721.5
[2025-10-12 16:39:43] 2025-10-12 14:38:50,242 | INFO     | mean y: 2517484.702586207
[2025-10-12 16:39:43] 2025-10-12 14:38:50,242 | INFO     | -- intersect: 21737912766.66457
[2025-10-12 16:39:43] 2025-10-12 14:38:50,242 | INFO     | intersect: 21737912766.66457
[2025-10-12 16:39:43] 2025-10-12 14:38:50,242 | INFO     | chi2: 0.9806254767675724
[2025-10-12 16:39:43] 2025-10-12 14:38:50,242 | INFO     | current chi2=0.9806254767675724 (change=59.68260362092891 %)
[2025-10-12 16:39:43] 2025-10-12 14:38:50,243 | INFO     | sum of square deviations: 3627000098.0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,245 | INFO     | sum of deviations: -43326284560.0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,245 | INFO     | mean x: 1760272874.0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,245 | INFO     | mean y: 2514669.2246696036
[2025-10-12 16:39:43] 2025-10-12 14:38:50,245 | INFO     | -- intersect: 21029832392.27289
[2025-10-12 16:39:43] 2025-10-12 14:38:50,245 | INFO     | intersect: 21029832392.27289
[2025-10-12 16:39:43] 2025-10-12 14:38:50,246 | INFO     | chi2: 0.9683796855420799
[2025-10-12 16:39:43] 2025-10-12 14:38:50,246 | INFO     | current chi2=0.9683796855420799 (change=1.2487735140084488 %)
[2025-10-12 16:39:43] 2025-10-12 14:38:50,246 | INFO     | left removable region: 20
[2025-10-12 16:39:43] 2025-10-12 14:38:50,247 | INFO     | sum of square deviations: 2710627567.5
[2025-10-12 16:39:43] 2025-10-12 14:38:50,248 | INFO     | sum of deviations: -12791496930.999994
[2025-10-12 16:39:43] 2025-10-12 14:38:50,248 | INFO     | mean x: 1760272843.5
[2025-10-12 16:39:43] 2025-10-12 14:38:50,248 | INFO     | mean y: 2514132.6796116503
[2025-10-12 16:39:43] 2025-10-12 14:38:50,248 | INFO     | -- intersect: 8309271189.725178
[2025-10-12 16:39:43] 2025-10-12 14:38:50,249 | INFO     | intersect: 8309271189.725178
[2025-10-12 16:39:43] 2025-10-12 14:38:50,249 | INFO     | chi2: 0.12145736080666615
[2025-10-12 16:39:43] 2025-10-12 14:38:50,249 | INFO     | -- intersect: 8309271189.725178
[2025-10-12 16:39:43] 2025-10-12 14:38:50,249 | INFO     | current memory leak: -4.72 B/s (using 206 data points, chi2=0.12)
[2025-10-12 16:39:43] 2025-10-12 14:38:50,250 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 16:39:43] 2025-10-12 14:38:50,264 | INFO     | ..............................
[2025-10-12 16:39:43] 2025-10-12 14:38:50,264 | INFO     | . Timing measurements:
[2025-10-12 16:39:43] 2025-10-12 14:38:50,265 | INFO     | . get job = 0 s
[2025-10-12 16:39:43] 2025-10-12 14:38:50,265 | INFO     | . initial setup = 7 s
[2025-10-12 16:39:43] 2025-10-12 14:38:50,265 | INFO     | . payload setup = 11 s
[2025-10-12 16:39:43] 2025-10-12 14:38:50,265 | INFO     | . stage-in = 0 s
[2025-10-12 16:39:43] 2025-10-12 14:38:50,265 | INFO     | . payload execution = 14463 s
[2025-10-12 16:39:43] 2025-10-12 14:38:50,265 | INFO     | . stage-out = 10 s
[2025-10-12 16:39:43] 2025-10-12 14:38:50,265 | INFO     | . log creation = 1 s
[2025-10-12 16:39:43] 2025-10-12 14:38:50,265 | INFO     | ..............................
[2025-10-12 16:39:43] 2025-10-12 14:38:50,763 | INFO     | 
[2025-10-12 16:39:43] 2025-10-12 14:38:50,763 | INFO     | job summary report
[2025-10-12 16:39:43] 2025-10-12 14:38:50,763 | INFO     | --------------------------------------------------
[2025-10-12 16:39:43] 2025-10-12 14:38:50,764 | INFO     | PanDA job id: 6838990837
[2025-10-12 16:39:43] 2025-10-12 14:38:50,764 | INFO     | task id: 46676269
[2025-10-12 16:39:43] 2025-10-12 14:38:50,764 | INFO     | errors: (none)
[2025-10-12 16:39:43] 2025-10-12 14:38:50,764 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:39:43] 2025-10-12 14:38:50,764 | INFO     | pilot state: finished 
[2025-10-12 16:39:43] 2025-10-12 14:38:50,764 | INFO     | transexitcode: 0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,764 | INFO     | exeerrorcode: 0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,764 | INFO     | exeerrordiag: 
[2025-10-12 16:39:43] 2025-10-12 14:38:50,764 | INFO     | exitcode: 0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,765 | INFO     | exitmsg: OK
[2025-10-12 16:39:43] 2025-10-12 14:38:50,765 | INFO     | cpuconsumptiontime: 54416 s
[2025-10-12 16:39:43] 2025-10-12 14:38:50,765 | INFO     | nevents: 400
[2025-10-12 16:39:43] 2025-10-12 14:38:50,765 | INFO     | neventsw: 0
[2025-10-12 16:39:43] 2025-10-12 14:38:50,765 | INFO     | pid: 12872
[2025-10-12 16:39:43] 2025-10-12 14:38:50,765 | INFO     | pgrp: 12872
[2025-10-12 16:39:43] 2025-10-12 14:38:50,765 | INFO     | corecount: 8
[2025-10-12 16:39:43] 2025-10-12 14:38:50,765 | INFO     | event service: False
[2025-10-12 16:39:43] 2025-10-12 14:38:50,765 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2348885, 12: 2348913, 20: 2349203, 23: 2349231, 14479: 2379623, 14492: 2388677, 14590: 2388815}
[2025-10-12 16:39:43] 2025-10-12 14:38:50,765 | INFO     | --------------------------------------------------
[2025-10-12 16:39:43] 2025-10-12 14:38:50,766 | INFO     | 
[2025-10-12 16:39:43] 2025-10-12 14:38:50,766 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-10-12 16:39:43] 2025-10-12 14:38:51,046 | INFO     | time since job start (14623s) is within the limit (172800.0s)
[2025-10-12 16:39:43] 2025-10-12 14:38:51,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:39:43] 2025-10-12 14:38:51,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,234 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:39:43] 2025-10-12 14:38:51,234 | INFO     | job 6838990837 has completed (purged errors)
[2025-10-12 16:39:43] 2025-10-12 14:38:51,234 | INFO     | overall cleanup function is called
[2025-10-12 16:39:43] 2025-10-12 14:38:52,244 | INFO     | --- collectZombieJob: --- 10, [12872]
[2025-10-12 16:39:43] 2025-10-12 14:38:52,244 | INFO     | zombie collector waiting for pid 12872
[2025-10-12 16:39:43] 2025-10-12 14:38:52,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:39:43] 2025-10-12 14:38:52,245 | INFO     | collected zombie processes
[2025-10-12 16:39:43] 2025-10-12 14:38:52,245 | INFO     | will attempt to kill all subprocesses of pid=12872
[2025-10-12 16:39:43] 2025-10-12 14:38:52,370 | INFO     | process IDs to be killed: [12872] (in reverse order)
[2025-10-12 16:39:43] 2025-10-12 14:38:53,182 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:39:43] 2025-10-12 14:38:53,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:39:43] 2025-10-12 14:38:53,185 | INFO     | did not find any defunct processes belonging to 12872
[2025-10-12 16:39:43] 2025-10-12 14:38:53,194 | INFO     | did not find any defunct processes belonging to 12872
[2025-10-12 16:39:43] 2025-10-12 14:38:53,194 | INFO     | ready for new job
[2025-10-12 16:39:43] 2025-10-12 14:38:53,195 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:39:43] 2025-10-12 14:38:53,197 | INFO     | ***************************************
[2025-10-12 16:39:43] 2025-10-12 14:38:53,197 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:39:43] 2025-10-12 14:38:53,197 | INFO     | ***************************************
[2025-10-12 16:39:43] 2025-10-12 14:38:53,197 | INFO     | 
[2025-10-12 16:39:43] 2025-10-12 14:38:53,198 | INFO     | pilot is running in a VM
[2025-10-12 16:39:43] 2025-10-12 14:38:53,198 | INFO     | architecture information:
[2025-10-12 16:39:43] 2025-10-12 14:38:53,220 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:39:43] 2025-10-12 14:38:53,428 | INFO     | cat /etc/os-release:
[2025-10-12 16:39:43] NAME="CentOS Linux"
[2025-10-12 16:39:43] VERSION="7 (Core)"
[2025-10-12 16:39:43] ID="centos"
[2025-10-12 16:39:43] ID_LIKE="rhel fedora"
[2025-10-12 16:39:43] VERSION_ID="7"
[2025-10-12 16:39:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:39:43] ANSI_COLOR="0;31"
[2025-10-12 16:39:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:39:43] HOME_URL="https://www.centos.org/"
[2025-10-12 16:39:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:39:43] 
[2025-10-12 16:39:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:39:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:39:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:39:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:39:43] 
[2025-10-12 16:39:43] 2025-10-12 14:38:53,428 | INFO     | ***************************************
[2025-10-12 16:39:43] 2025-10-12 14:38:53,931 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-10-12 16:39:43] 2025-10-12 14:38:54,192 | INFO     | sufficient remaining disk space (496279486464 B)
[2025-10-12 16:39:43] 2025-10-12 14:38:54,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:39:43] 2025-10-12 14:38:54,192 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:39:43] 2025-10-12 14:38:54,192 | INFO     | update_server=False
[2025-10-12 16:39:43] 2025-10-12 14:38:54,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:39:43] 2025-10-12 14:38:54,754 | INFO     | all data control threads have been joined
[2025-10-12 16:39:43] 2025-10-12 14:38:54,758 | INFO     | all payload control threads have been joined
[2025-10-12 16:39:43] 2025-10-12 14:38:54,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:39:43] 2025-10-12 14:38:54,760 | INFO     | aborting loop
[2025-10-12 16:39:43] 2025-10-12 14:38:55,198 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:55,251 | INFO     | all job control threads have been joined
[2025-10-12 16:39:43] 2025-10-12 14:38:55,312 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:55,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:55,410 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:55,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:39:43] 2025-10-12 14:38:55,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:39:43] 2025-10-12 14:38:55,484 | INFO     | [job] validate thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:55,603 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:55,760 | INFO     | [data] control thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:55,764 | INFO     | [payload] control thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:55,766 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:56,257 | INFO     | [job] control thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:56,411 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:56,422 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:56,446 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:56,640 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:57,419 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:38:57,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:39:43] 2025-10-12 14:39:01,572 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:39:43] 2025-10-12 14:39:24,204 | INFO     | PID=6342 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 16:39:43] 2025-10-12 14:39:24,204 | INFO     | .. there are 9 such processes running
[2025-10-12 16:39:43] 2025-10-12 14:39:24,205 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:39:43] 2025-10-12 14:39:24,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:39:43] 2025-10-12 14:39:24,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:39:43] 2025-10-12 14:39:33,604 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:39:43] 2025-10-12 14:39:34,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245258700608)>', '<ExcThread(monitor, started 140244817004288)>']
[2025-10-12 16:39:43] 2025-10-12 14:39:35,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:39:43] 2025-10-12 14:39:35,271 | INFO     | [monitor] control thread has ended
[2025-10-12 16:39:43] 2025-10-12 14:39:39,807 | INFO     | all workflow threads have been joined
[2025-10-12 16:39:43] 2025-10-12 14:39:39,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:39:43] 2025-10-12 14:39:39,808 | INFO     | traces error code: 0
[2025-10-12 16:39:43] 2025-10-12 14:39:39,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:39:43] 2025-10-12 14:39:40,059 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:39:43] 2025-10-12 14:39:40,122 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:39:43] 2025-10-12 14:39:40,213 [wrapper] pilotpid: 6342
[2025-10-12 16:39:43] 2025-10-12 14:39:40,297 [wrapper] Pilot exit status: 0
[2025-10-12 16:39:43] 2025-10-12 14:39:40,722 [wrapper] pandaids: 6838990837
[2025-10-12 16:39:43] 2025-10-12 14:39:41,096 [wrapper] cleanup supervisor_pilot  3515 6343
[2025-10-12 16:39:43] 2025-10-12 14:39:41,190 [wrapper] Test setup, not cleaning
[2025-10-12 16:39:43] 2025-10-12 14:39:41,275 [wrapper] apfmon messages muted
[2025-10-12 16:39:43] 2025-10-12 14:39:41,381 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:39:43] 2025-10-12 14:39:41,426 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:39:43]  *** Error codes and diagnostics ***
[2025-10-12 16:39:43]     "exeErrorCode": 0,
[2025-10-12 16:39:43]     "exeErrorDiag": "",
[2025-10-12 16:39:43]     "pilotErrorCode": 0,
[2025-10-12 16:39:43]     "pilotErrorDiag": "",
[2025-10-12 16:39:43]  *** Listing of results directory ***
[2025-10-12 16:39:43] total 419012
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc    557409 Oct 12 00:51 pilot3.tar.gz
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc      5112 Oct 12 00:56 queuedata.json
[2025-10-12 16:39:43] -rwx------. 1 boinc boinc     36292 Oct 12 00:56 runpilot2-wrapper.sh
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc       100 Oct 12 12:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:39:43] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 12:31 run_atlas
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc       105 Oct 12 12:31 job.xml
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc      6387 Oct 12 12:31 init_data.xml
[2025-10-12 16:39:43] -rw-r--r--. 2 boinc boinc 220585407 Oct 12 12:31 EVNT.46676267._002672.pool.root.1
[2025-10-12 16:39:43] -rw-r--r--. 2 boinc boinc     15120 Oct 12 12:31 start_atlas.sh
[2025-10-12 16:39:43] drwxrwx--x. 2 boinc boinc        68 Oct 12 12:31 shared
[2025-10-12 16:39:43] -rw-r--r--. 2 boinc boinc    569677 Oct 12 12:31 input.tar.gz
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc         0 Oct 12 12:31 boinc_lockfile
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc      2550 Oct 12 12:31 pandaJob.out
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc    975520 Oct 12 12:35 agis_schedconf.cvmfs.json
[2025-10-12 16:39:43] drwx------. 5 boinc boinc      4096 Oct 12 12:35 pilot3
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc 199714641 Oct 12 16:35 HITS.46676269._066326.pool.root.1
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc       531 Oct 12 16:36 boinc_task_state.xml
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc      1017 Oct 12 16:36 memory_monitor_summary.json
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc   1560580 Oct 12 16:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc    468285 Oct 12 16:37 log.46676269._066326.job.log.tgz.1
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc      7779 Oct 12 16:38 heartbeat.json
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc        95 Oct 12 16:38 pilot_heartbeat.json
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc      8192 Oct 12 16:39 boinc_mmap_file
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc        28 Oct 12 16:39 wrapper_checkpoint.txt
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc      4883 Oct 12 16:39 pilotlog.txt
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc   1972224 Oct 12 16:39 log.46676269._066326.job.log.1
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc       357 Oct 12 16:39 output.list
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc       620 Oct 12 16:39 runtime_log
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc   2457600 Oct 12 16:39 result.tar.gz
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc       657 Oct 12 16:39 YbDLDmLhxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkqhNDmHtCrRm.diag
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc      8703 Oct 12 16:39 runtime_log.err
[2025-10-12 16:39:43] -rw-r--r--. 1 boinc boinc     20604 Oct 12 16:39 stderr.txt
[2025-10-12 16:39:43] HITS file was successfully produced:
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc 199714641 Oct 12 16:35 shared/HITS.pool.root.1
[2025-10-12 16:39:43]  *** Contents of shared directory: ***
[2025-10-12 16:39:43] total 413428
[2025-10-12 16:39:43] -rw-r--r--. 2 boinc boinc 220585407 Oct 12 12:31 ATLAS.root_0
[2025-10-12 16:39:43] -rw-r--r--. 2 boinc boinc     15120 Oct 12 12:31 start_atlas.sh
[2025-10-12 16:39:43] -rw-r--r--. 2 boinc boinc    569677 Oct 12 12:31 input.tar.gz
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc 199714641 Oct 12 16:35 HITS.pool.root.1
[2025-10-12 16:39:43] -rw-------. 1 boinc boinc   2457600 Oct 12 16:39 result.tar.gz
16:39:45 (2232): run_atlas exited; CPU time 54595.711592
16:39:45 (2232): called boinc_finish(0)

</stderr_txt>
]]>

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