Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:37:41 (125845): wrapper (7.7.26015): starting
06:37:41 (125845): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 06:37:41] Arguments: --nthreads 8
[2025-10-12 06:37:41] Threads: 8
[2025-10-12 06:37:41] Checking for CVMFS
[2025-10-12 06:37:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:37:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:37:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:37:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:37:43] 2.13.2.0 108345 129134 473520 151617 1 554 29249189 32935936 39978 16776704 0 238026256 99.581 251977513 20637 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 06:37:43] CVMFS is ok
[2025-10-12 06:37:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:37:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:37:43] Further information can be found at the LHC@home message board.
[2025-10-12 06:37:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:37:43] Checking for apptainer binary...
[2025-10-12 06:37:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:37:43] Running /usr/bin/apptainer --version
[2025-10-12 06:37:43] apptainer version 1.4.3-1.el9
[2025-10-12 06:37:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:37:44] c6-8-25-2.aglt2.org
[2025-10-12 06:37:44] apptainer works
[2025-10-12 06:37:44] Set ATHENA_PROC_NUMBER=8
[2025-10-12 06:37:44] Set ATHENA_CORE_NUMBER=8
[2025-10-12 06:37:44] Starting ATLAS job with PandaID=6839588928
[2025-10-12 06:37:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:06:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:06:35] 2025-10-12 14:05:40,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:06:35] 2025-10-12 14:05:40,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:06:35] 2025-10-12 14:05:40,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:06:35] 2025-10-12 14:05:40,771 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:06:35] 2025-10-12 14:05:40,772 | INFO     | sum of square deviations: 2480543560.7799835
[2025-10-12 10:06:35] 2025-10-12 14:05:40,782 | INFO     | sum of deviations: 48279641173.34
[2025-10-12 10:06:35] 2025-10-12 14:05:40,782 | INFO     | mean x: 1760271774.69
[2025-10-12 10:06:35] 2025-10-12 14:05:40,782 | INFO     | mean y: 2055943.57
[2025-10-12 10:06:35] 2025-10-12 14:05:40,782 | INFO     | -- intersect: -34258696817.759766
[2025-10-12 10:06:35] 2025-10-12 14:05:40,782 | INFO     | intersect: -34258696817.759766
[2025-10-12 10:06:35] 2025-10-12 14:05:40,783 | INFO     | chi2: 5.4751062300682385
[2025-10-12 10:06:35] 2025-10-12 14:05:40,783 | INFO     | sum of square deviations: 2299119190.5948734
[2025-10-12 10:06:35] 2025-10-12 14:05:40,785 | INFO     | sum of deviations: 70302607360.18977
[2025-10-12 10:06:35] 2025-10-12 14:05:40,785 | INFO     | mean x: 1760271622.194872
[2025-10-12 10:06:35] 2025-10-12 14:05:40,785 | INFO     | mean y: 2074162.3897435898
[2025-10-12 10:06:35] 2025-10-12 14:05:40,785 | INFO     | -- intersect: -53823619263.46128
[2025-10-12 10:06:35] 2025-10-12 14:05:40,785 | INFO     | intersect: -53823619263.46128
[2025-10-12 10:06:35] 2025-10-12 14:05:40,794 | INFO     | chi2: 3.8523796347062556
[2025-10-12 10:06:35] 2025-10-12 14:05:40,794 | INFO     | current chi2=3.8523796347062556 (change=29.638266860472555 %)
[2025-10-12 10:06:35] 2025-10-12 14:05:40,795 | INFO     | sum of square deviations: 2126740844.6789525
[2025-10-12 10:06:35] 2025-10-12 14:05:40,796 | INFO     | sum of deviations: 68261711705.942116
[2025-10-12 10:06:35] 2025-10-12 14:05:40,796 | INFO     | mean x: 1760271469.6894736
[2025-10-12 10:06:35] 2025-10-12 14:05:40,797 | INFO     | mean y: 2072348.3210526316
[2025-10-12 10:06:35] 2025-10-12 14:05:40,797 | INFO     | -- intersect: -56497121659.624374
[2025-10-12 10:06:35] 2025-10-12 14:05:40,797 | INFO     | intersect: -56497121659.624374
[2025-10-12 10:06:35] 2025-10-12 14:05:40,797 | INFO     | chi2: 3.852682925041738
[2025-10-12 10:06:35] 2025-10-12 14:05:40,797 | INFO     | current chi2=3.852682925041738 (change=-0.007872804973583884 %)
[2025-10-12 10:06:35] 2025-10-12 14:05:40,797 | INFO     | right removable region: 189
[2025-10-12 10:06:35] 2025-10-12 14:05:40,806 | INFO     | sum of square deviations: 2299096010.5948734
[2025-10-12 10:06:35] 2025-10-12 14:05:40,816 | INFO     | sum of deviations: 611857431.7589645
[2025-10-12 10:06:35] 2025-10-12 14:05:40,816 | INFO     | mean x: 1760271927.194872
[2025-10-12 10:06:35] 2025-10-12 14:05:40,816 | INFO     | mean y: 2095904.558974359
[2025-10-12 10:06:35] 2025-10-12 14:05:40,817 | INFO     | -- intersect: -466364505.79691267
[2025-10-12 10:06:35] 2025-10-12 14:05:40,817 | INFO     | intersect: -466364505.79691267
[2025-10-12 10:06:35] 2025-10-12 14:05:40,817 | INFO     | chi2: 2.350870279303625
[2025-10-12 10:06:35] 2025-10-12 14:05:40,817 | INFO     | current chi2=2.350870279303625 (change=57.062563162827885 %)
[2025-10-12 10:06:35] 2025-10-12 14:05:40,818 | INFO     | sum of square deviations: 2126742308.6789525
[2025-10-12 10:06:35] 2025-10-12 14:05:40,819 | INFO     | sum of deviations: -18940589118.62632
[2025-10-12 10:06:35] 2025-10-12 14:05:40,819 | INFO     | mean x: 1760272079.6894736
[2025-10-12 10:06:35] 2025-10-12 14:05:40,819 | INFO     | mean y: 2113156.8368421053
[2025-10-12 10:06:35] 2025-10-12 14:05:40,819 | INFO     | -- intersect: 15678949067.952944
[2025-10-12 10:06:35] 2025-10-12 14:05:40,819 | INFO     | intersect: 15678949067.952944
[2025-10-12 10:06:35] 2025-10-12 14:05:40,828 | INFO     | chi2: 1.8336065792584533
[2025-10-12 10:06:35] 2025-10-12 14:05:40,828 | INFO     | current chi2=1.8336065792584533 (change=22.003072844937908 %)
[2025-10-12 10:06:35] 2025-10-12 14:05:40,829 | INFO     | left removable region: 20
[2025-10-12 10:06:35] 2025-10-12 14:05:40,829 | INFO     | sum of square deviations: 1496624412.674562
[2025-10-12 10:06:35] 2025-10-12 14:05:40,830 | INFO     | sum of deviations: 1761015523.3786995
[2025-10-12 10:06:35] 2025-10-12 14:05:40,830 | INFO     | mean x: 1760272049.1775148
[2025-10-12 10:06:35] 2025-10-12 14:05:40,831 | INFO     | mean y: 2134961.520710059
[2025-10-12 10:06:35] 2025-10-12 14:05:40,831 | INFO     | -- intersect: -2069103739.1975152
[2025-10-12 10:06:35] 2025-10-12 14:05:40,831 | INFO     | intersect: -2069103739.1975152
[2025-10-12 10:06:35] 2025-10-12 14:05:40,831 | INFO     | chi2: 0.08419653138420594
[2025-10-12 10:06:35] 2025-10-12 14:05:40,831 | INFO     | -- intersect: -2069103739.1975152
[2025-10-12 10:06:35] 2025-10-12 14:05:40,832 | INFO     | current memory leak: 1.18 B/s (using 169 data points, chi2=0.08)
[2025-10-12 10:06:35] 2025-10-12 14:05:40,841 | INFO     | could have reported an average CPU frequency of 2701 MHz (10 samples)
[2025-10-12 10:06:35] 2025-10-12 14:05:40,841 | INFO     | ..............................
[2025-10-12 10:06:35] 2025-10-12 14:05:40,841 | INFO     | . Timing measurements:
[2025-10-12 10:06:35] 2025-10-12 14:05:40,841 | INFO     | . get job = 0 s
[2025-10-12 10:06:35] 2025-10-12 14:05:40,841 | INFO     | . initial setup = 6 s
[2025-10-12 10:06:35] 2025-10-12 14:05:40,842 | INFO     | . payload setup = 47 s
[2025-10-12 10:06:35] 2025-10-12 14:05:40,842 | INFO     | . stage-in = 0 s
[2025-10-12 10:06:35] 2025-10-12 14:05:40,842 | INFO     | . payload execution = 12217 s
[2025-10-12 10:06:35] 2025-10-12 14:05:40,842 | INFO     | . stage-out = 6 s
[2025-10-12 10:06:35] 2025-10-12 14:05:40,842 | INFO     | . log creation = 0 s
[2025-10-12 10:06:35] 2025-10-12 14:05:40,842 | INFO     | ..............................
[2025-10-12 10:06:35] 2025-10-12 14:05:41,574 | INFO     | 
[2025-10-12 10:06:35] 2025-10-12 14:05:41,574 | INFO     | job summary report
[2025-10-12 10:06:35] 2025-10-12 14:05:41,574 | INFO     | --------------------------------------------------
[2025-10-12 10:06:35] 2025-10-12 14:05:41,574 | INFO     | PanDA job id: 6839588928
[2025-10-12 10:06:35] 2025-10-12 14:05:41,575 | INFO     | task id: 46676269
[2025-10-12 10:06:35] 2025-10-12 14:05:41,575 | INFO     | errors: (none)
[2025-10-12 10:06:35] 2025-10-12 14:05:41,575 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:06:35] 2025-10-12 14:05:41,575 | INFO     | pilot state: finished 
[2025-10-12 10:06:35] 2025-10-12 14:05:41,575 | INFO     | transexitcode: 0
[2025-10-12 10:06:35] 2025-10-12 14:05:41,575 | INFO     | exeerrorcode: 0
[2025-10-12 10:06:35] 2025-10-12 14:05:41,575 | INFO     | exeerrordiag: 
[2025-10-12 10:06:35] 2025-10-12 14:05:41,575 | INFO     | exitcode: 0
[2025-10-12 10:06:35] 2025-10-12 14:05:41,575 | INFO     | exitmsg: OK
[2025-10-12 10:06:35] 2025-10-12 14:05:41,575 | INFO     | cpuconsumptiontime: 39943 s
[2025-10-12 10:06:35] 2025-10-12 14:05:41,575 | INFO     | nevents: 400
[2025-10-12 10:06:35] 2025-10-12 14:05:41,576 | INFO     | neventsw: 0
[2025-10-12 10:06:35] 2025-10-12 14:05:41,576 | INFO     | pid: 149832
[2025-10-12 10:06:35] 2025-10-12 14:05:41,576 | INFO     | pgrp: 149832
[2025-10-12 10:06:35] 2025-10-12 14:05:41,576 | INFO     | corecount: 8
[2025-10-12 10:06:35] 2025-10-12 14:05:41,576 | INFO     | event service: False
[2025-10-12 10:06:35] 2025-10-12 14:05:41,576 | INFO     | sizes: {0: 2348628, 1: 2348712, 2: 2348911, 13: 2348911, 25: 2348967, 37: 2348995, 43: 2349413, 48: 2349441, 12269: 2378897, 12270: 2378896, 12278: 2387950, 12281:
[2025-10-12 10:06:35] 2025-10-12 14:05:41,576 | INFO     | --------------------------------------------------
[2025-10-12 10:06:35] 2025-10-12 14:05:41,576 | INFO     | 
[2025-10-12 10:06:35] 2025-10-12 14:05:41,576 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 10:06:35] 2025-10-12 14:05:41,695 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,695 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:06:35] 2025-10-12 14:05:41,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:06:35] 2025-10-12 14:05:41,697 | INFO     | job 6839588928 has completed (purged errors)
[2025-10-12 10:06:35] 2025-10-12 14:05:41,697 | INFO     | overall cleanup function is called
[2025-10-12 10:06:35] 2025-10-12 14:05:42,712 | INFO     | --- collectZombieJob: --- 10, [149832]
[2025-10-12 10:06:35] 2025-10-12 14:05:42,712 | INFO     | zombie collector waiting for pid 149832
[2025-10-12 10:06:35] 2025-10-12 14:05:42,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:06:35] 2025-10-12 14:05:42,712 | INFO     | collected zombie processes
[2025-10-12 10:06:35] 2025-10-12 14:05:42,712 | INFO     | will attempt to kill all subprocesses of pid=149832
[2025-10-12 10:06:35] 2025-10-12 14:05:47,439 | INFO     | process IDs to be killed: [149832] (in reverse order)
[2025-10-12 10:06:35] 2025-10-12 14:05:47,876 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:06:35] 2025-10-12 14:05:47,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:06:35] 2025-10-12 14:05:47,943 | INFO     | did not find any defunct processes belonging to 149832
[2025-10-12 10:06:35] 2025-10-12 14:05:48,005 | INFO     | did not find any defunct processes belonging to 149832
[2025-10-12 10:06:35] 2025-10-12 14:05:48,005 | INFO     | ready for new job
[2025-10-12 10:06:35] 2025-10-12 14:05:48,006 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:06:35] 2025-10-12 14:05:48,023 | INFO     | ***************************************
[2025-10-12 10:06:35] 2025-10-12 14:05:48,023 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:06:35] 2025-10-12 14:05:48,023 | INFO     | ***************************************
[2025-10-12 10:06:35] 2025-10-12 14:05:48,023 | INFO     | 
[2025-10-12 10:06:35] 2025-10-12 14:05:48,064 | INFO     | architecture information:
[2025-10-12 10:06:35] 2025-10-12 14:05:48,108 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:06:35] 2025-10-12 14:05:48,189 | INFO     | cat /etc/os-release:
[2025-10-12 10:06:35] NAME="CentOS Linux"
[2025-10-12 10:06:35] VERSION="7 (Core)"
[2025-10-12 10:06:35] ID="centos"
[2025-10-12 10:06:35] ID_LIKE="rhel fedora"
[2025-10-12 10:06:35] VERSION_ID="7"
[2025-10-12 10:06:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:06:35] ANSI_COLOR="0;31"
[2025-10-12 10:06:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:06:35] HOME_URL="https://www.centos.org/"
[2025-10-12 10:06:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:06:35] 
[2025-10-12 10:06:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:06:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:06:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:06:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:06:35] 
[2025-10-12 10:06:35] 2025-10-12 14:05:48,190 | INFO     | ***************************************
[2025-10-12 10:06:35] 2025-10-12 14:05:48,693 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 10:06:35] 2025-10-12 14:05:48,747 | INFO     | sufficient remaining disk space (73703358464 B)
[2025-10-12 10:06:35] 2025-10-12 14:05:48,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:06:35] 2025-10-12 14:05:48,748 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:06:35] 2025-10-12 14:05:48,748 | INFO     | update_server=False
[2025-10-12 10:06:35] 2025-10-12 14:05:48,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:06:35] 2025-10-12 14:05:48,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:06:35] 2025-10-12 14:05:48,749 | INFO     | aborting loop
[2025-10-12 10:06:35] 2025-10-12 14:05:48,911 | INFO     | all data control threads have been joined
[2025-10-12 10:06:35] 2025-10-12 14:05:48,911 | INFO     | all payload control threads have been joined
[2025-10-12 10:06:35] 2025-10-12 14:05:49,754 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:49,767 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:49,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:06:35] 2025-10-12 14:05:49,837 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:49,917 | INFO     | [data] control thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:49,918 | INFO     | [payload] control thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:50,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:06:35] 2025-10-12 14:05:50,235 | INFO     | all job control threads have been joined
[2025-10-12 10:06:35] 2025-10-12 14:05:50,368 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:50,369 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:50,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:06:35] 2025-10-12 14:05:50,818 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:50,884 | INFO     | [job] validate thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:50,970 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:51,158 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:51,227 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:51,263 | INFO     | [job] control thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:51,613 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:52,222 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:05:53,903 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:06:35] 2025-10-12 14:06:24,124 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:06:35] 2025-10-12 14:06:24,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140469092308800)>', '<ExcThread(monitor, started 140468356630272)>']
[2025-10-12 10:06:35] 2025-10-12 14:06:26,435 | INFO     | PID=134523 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 10:06:35] 2025-10-12 14:06:26,435 | INFO     | .. there are 50 such processes running
[2025-10-12 10:06:35] 2025-10-12 14:06:26,435 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:06:35] 2025-10-12 14:06:26,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:06:35] 2025-10-12 14:06:26,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:06:35] 2025-10-12 14:06:26,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:06:35] 2025-10-12 14:06:26,436 | INFO     | [monitor] control thread has ended
[2025-10-12 10:06:35] 2025-10-12 14:06:29,304 | INFO     | all workflow threads have been joined
[2025-10-12 10:06:35] 2025-10-12 14:06:29,304 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:06:35] 2025-10-12 14:06:29,304 | INFO     | traces error code: 0
[2025-10-12 10:06:35] 2025-10-12 14:06:29,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:06:35] 2025-10-12 14:06:33,565 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:06:35] 2025-10-12 14:06:33,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:06:35] 2025-10-12 14:06:33,611 [wrapper] pilotpid: 134523
[2025-10-12 10:06:35] 2025-10-12 14:06:33,646 [wrapper] Pilot exit status: 0
[2025-10-12 10:06:35] 2025-10-12 14:06:33,794 [wrapper] pandaids: 6839588928
[2025-10-12 10:06:35] 2025-10-12 14:06:34,182 [wrapper] cleanup supervisor_pilot  906356 134524
[2025-10-12 10:06:35] 2025-10-12 14:06:34,242 [wrapper] Test setup, not cleaning
[2025-10-12 10:06:35] 2025-10-12 14:06:34,292 [wrapper] apfmon messages muted
[2025-10-12 10:06:35] 2025-10-12 14:06:34,399 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:06:35] 2025-10-12 14:06:34,460 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:06:35]  *** Error codes and diagnostics ***
[2025-10-12 10:06:35]     "exeErrorCode": 0,
[2025-10-12 10:06:35]     "exeErrorDiag": "",
[2025-10-12 10:06:35]     "pilotErrorCode": 0,
[2025-10-12 10:06:35]     "pilotErrorDiag": "",
[2025-10-12 10:06:35]  *** Listing of results directory ***
[2025-10-12 10:06:35] total 414016
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 01:26 pilot3.tar.gz
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 01:38 queuedata.json
[2025-10-12 10:06:35] -rwx------. 1 boincer umatlas     36292 Oct 12 01:41 runpilot2-wrapper.sh
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas       100 Oct 12 06:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:06:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 06:37 run_atlas
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas       105 Oct 12 06:37 job.xml
[2025-10-12 10:06:35] -rw-r--r--. 2 boincer umatlas 218228239 Oct 12 06:37 EVNT.46676267._004328.pool.root.1
[2025-10-12 10:06:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:37 start_atlas.sh
[2025-10-12 10:06:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 06:37 shared
[2025-10-12 10:06:35] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 06:37 input.tar.gz
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas         0 Oct 12 06:37 boinc_lockfile
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 06:37 pandaJob.out
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas    975520 Oct 12 06:38 agis_schedconf.cvmfs.json
[2025-10-12 10:06:35] drwx------. 5 boincer umatlas      4096 Oct 12 06:39 pilot3
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas 198106760 Oct 12 10:02 HITS.46676269._072120.pool.root.1
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas       530 Oct 12 10:02 boinc_task_state.xml
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas      6857 Oct 12 10:03 init_data.xml
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas      1044 Oct 12 10:04 memory_monitor_summary.json
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:05 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas    410844 Oct 12 10:05 log.46676269._072120.job.log.tgz.1
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas        95 Oct 12 10:05 pilot_heartbeat.json
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas      7833 Oct 12 10:05 heartbeat.json
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:06 boinc_mmap_file
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas        27 Oct 12 10:06 wrapper_checkpoint.txt
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas      4823 Oct 12 10:06 pilotlog.txt
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas   1444739 Oct 12 10:06 log.46676269._072120.job.log.1
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas       357 Oct 12 10:06 output.list
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:06 runtime_log
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas   1873920 Oct 12 10:06 result.tar.gz
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 10:06 runtime_log.err
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas       656 Oct 12 10:06 1uGKDm003R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhJTMDmfq5ufm.diag
[2025-10-12 10:06:35] -rw-r--r--. 1 boincer umatlas     21018 Oct 12 10:06 stderr.txt
[2025-10-12 10:06:35] HITS file was successfully produced:
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas 198106760 Oct 12 10:02 shared/HITS.pool.root.1
[2025-10-12 10:06:35]  *** Contents of shared directory: ***
[2025-10-12 10:06:35] total 408996
[2025-10-12 10:06:35] -rw-r--r--. 2 boincer umatlas 218228239 Oct 12 06:37 ATLAS.root_0
[2025-10-12 10:06:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:37 start_atlas.sh
[2025-10-12 10:06:35] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 06:37 input.tar.gz
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas 198106760 Oct 12 10:02 HITS.pool.root.1
[2025-10-12 10:06:35] -rw-------. 1 boincer umatlas   1873920 Oct 12 10:06 result.tar.gz
10:06:36 (125845): run_atlas exited; CPU time 40602.778163
10:06:36 (125845): called boinc_finish(0)

</stderr_txt>
]]>

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