Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:39:40 (312): wrapper (7.7.26015): starting
16:39:40 (312): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:39:40] Arguments: --nthreads 8
[2025-10-12 16:39:40] Threads: 8
[2025-10-12 16:39:40] Checking for CVMFS
[2025-10-12 16:39:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:39:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:39:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:39:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:39:42] 2.11.2.0 4058 220674 139176 151623 3 60 15544388 25165825 4632 130560 0 127069836 99.886 70537077 3533 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 16:39:42] CVMFS is ok
[2025-10-12 16:39:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:39:42] Checking for apptainer binary...
[2025-10-12 16:39:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:39:42] Running /usr/bin/apptainer --version
[2025-10-12 16:39:43] apptainer version 1.3.2-1.el7
[2025-10-12 16:39:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:39:56] cg-vwn233.simple-grid.lan
[2025-10-12 16:39:56] apptainer works
[2025-10-12 16:39:57] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:39:57] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:39:57] Starting ATLAS job with PandaID=6839387306
[2025-10-12 16:39:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:36:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:36:43] 2025-10-12 18:35:30,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:36:43] 2025-10-12 18:35:30,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:36:43] 2025-10-12 18:35:30,689 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:36:43] 2025-10-12 18:35:30,690 | INFO     | sum of square deviations: 3723716330.0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,697 | INFO     | sum of deviations: -27281892600.999992
[2025-10-12 20:36:43] 2025-10-12 18:35:30,697 | INFO     | mean x: 1760287071.0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,697 | INFO     | mean y: 2474881.8951965068
[2025-10-12 20:36:43] 2025-10-12 18:35:30,697 | INFO     | -- intersect: 12899258246.150778
[2025-10-12 20:36:43] 2025-10-12 18:35:30,697 | INFO     | intersect: 12899258246.150778
[2025-10-12 20:36:43] 2025-10-12 18:35:30,698 | INFO     | chi2: 3.2879063341055064
[2025-10-12 20:36:43] 2025-10-12 18:35:30,698 | INFO     | sum of square deviations: 3485088600.0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,700 | INFO     | sum of deviations: 4114151100.000001
[2025-10-12 20:36:43] 2025-10-12 18:35:30,700 | INFO     | mean x: 1760286918.5
[2025-10-12 20:36:43] 2025-10-12 18:35:30,701 | INFO     | mean y: 2494686.098214286
[2025-10-12 20:36:43] 2025-10-12 18:35:30,701 | INFO     | -- intersect: -2075526045.4442742
[2025-10-12 20:36:43] 2025-10-12 18:35:30,701 | INFO     | intersect: -2075526045.4442742
[2025-10-12 20:36:43] 2025-10-12 18:35:30,701 | INFO     | chi2: 1.628928614508655
[2025-10-12 20:36:43] 2025-10-12 18:35:30,701 | INFO     | current chi2=1.628928614508655 (change=50.456964129064396 %)
[2025-10-12 20:36:43] 2025-10-12 18:35:30,702 | INFO     | sum of square deviations: 3256879670.0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,704 | INFO     | sum of deviations: 4027623027.000006
[2025-10-12 20:36:43] 2025-10-12 18:35:30,704 | INFO     | mean x: 1760286766.0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,704 | INFO     | mean y: 2494628.2602739725
[2025-10-12 20:36:43] 2025-10-12 18:35:30,704 | INFO     | -- intersect: -2174365505.1277585
[2025-10-12 20:36:43] 2025-10-12 18:35:30,704 | INFO     | intersect: -2174365505.1277585
[2025-10-12 20:36:43] 2025-10-12 18:35:30,704 | INFO     | chi2: 1.6292180849098712
[2025-10-12 20:36:43] 2025-10-12 18:35:30,705 | INFO     | current chi2=1.6292180849098712 (change=-0.017770600788635554 %)
[2025-10-12 20:36:43] 2025-10-12 18:35:30,705 | INFO     | right removable region: 218
[2025-10-12 20:36:43] 2025-10-12 18:35:30,705 | INFO     | sum of square deviations: 3485088600.0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,707 | INFO     | sum of deviations: -60871827623.5
[2025-10-12 20:36:43] 2025-10-12 18:35:30,707 | INFO     | mean x: 1760287223.5
[2025-10-12 20:36:43] 2025-10-12 18:35:30,707 | INFO     | mean y: 2496121.03125
[2025-10-12 20:36:43] 2025-10-12 18:35:30,707 | INFO     | -- intersect: 30748314301.017094
[2025-10-12 20:36:43] 2025-10-12 18:35:30,707 | INFO     | intersect: 30748314301.017094
[2025-10-12 20:36:43] 2025-10-12 18:35:30,708 | INFO     | chi2: 1.8659525687123681
[2025-10-12 20:36:43] 2025-10-12 18:35:30,708 | INFO     | current chi2=1.8659525687123681 (change=43.248001034676335 %)
[2025-10-12 20:36:43] 2025-10-12 18:35:30,708 | INFO     | sum of square deviations: 3256879670.0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,710 | INFO     | sum of deviations: -56161332074.99999
[2025-10-12 20:36:43] 2025-10-12 18:35:30,710 | INFO     | mean x: 1760287376.0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,710 | INFO     | mean y: 2492946.328767123
[2025-10-12 20:36:43] 2025-10-12 18:35:30,710 | INFO     | -- intersect: 30356725797.35896
[2025-10-12 20:36:43] 2025-10-12 18:35:30,710 | INFO     | intersect: 30356725797.35896
[2025-10-12 20:36:43] 2025-10-12 18:35:30,711 | INFO     | chi2: 1.8550707318248496
[2025-10-12 20:36:43] 2025-10-12 18:35:30,711 | INFO     | current chi2=1.8550707318248496 (change=0.583178643979559 %)
[2025-10-12 20:36:43] 2025-10-12 18:35:30,711 | INFO     | left removable region: 20
[2025-10-12 20:36:43] 2025-10-12 18:35:30,711 | INFO     | sum of square deviations: 2406926989.5
[2025-10-12 20:36:43] 2025-10-12 18:35:30,713 | INFO     | sum of deviations: -10414186448.000004
[2025-10-12 20:36:43] 2025-10-12 18:35:30,713 | INFO     | mean x: 1760287345.5
[2025-10-12 20:36:43] 2025-10-12 18:35:30,713 | INFO     | mean y: 2503074.383838384
[2025-10-12 20:36:43] 2025-10-12 18:35:30,713 | INFO     | -- intersect: 7618837387.000512
[2025-10-12 20:36:43] 2025-10-12 18:35:30,713 | INFO     | intersect: 7618837387.000512
[2025-10-12 20:36:43] 2025-10-12 18:35:30,713 | INFO     | chi2: 0.09460416875110693
[2025-10-12 20:36:43] 2025-10-12 18:35:30,714 | INFO     | -- intersect: 7618837387.000512
[2025-10-12 20:36:43] 2025-10-12 18:35:30,714 | INFO     | current memory leak: -4.33 B/s (using 198 data points, chi2=0.09)
[2025-10-12 20:36:43] 2025-10-12 18:35:30,714 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 20:36:43] 2025-10-12 18:35:30,714 | INFO     | ..............................
[2025-10-12 20:36:43] 2025-10-12 18:35:30,715 | INFO     | . Timing measurements:
[2025-10-12 20:36:43] 2025-10-12 18:35:30,715 | INFO     | . get job = 0 s
[2025-10-12 20:36:43] 2025-10-12 18:35:30,715 | INFO     | . initial setup = 3 s
[2025-10-12 20:36:43] 2025-10-12 18:35:30,715 | INFO     | . payload setup = 9 s
[2025-10-12 20:36:43] 2025-10-12 18:35:30,715 | INFO     | . stage-in = 0 s
[2025-10-12 20:36:43] 2025-10-12 18:35:30,715 | INFO     | . payload execution = 13935 s
[2025-10-12 20:36:43] 2025-10-12 18:35:30,715 | INFO     | . stage-out = 3 s
[2025-10-12 20:36:43] 2025-10-12 18:35:30,715 | INFO     | . log creation = 1 s
[2025-10-12 20:36:43] 2025-10-12 18:35:30,715 | INFO     | ..............................
[2025-10-12 20:36:43] 2025-10-12 18:35:30,859 | INFO     | 
[2025-10-12 20:36:43] 2025-10-12 18:35:30,859 | INFO     | job summary report
[2025-10-12 20:36:43] 2025-10-12 18:35:30,859 | INFO     | --------------------------------------------------
[2025-10-12 20:36:43] 2025-10-12 18:35:30,859 | INFO     | PanDA job id: 6839387306
[2025-10-12 20:36:43] 2025-10-12 18:35:30,859 | INFO     | task id: 46676269
[2025-10-12 20:36:43] 2025-10-12 18:35:30,859 | INFO     | errors: (none)
[2025-10-12 20:36:43] 2025-10-12 18:35:30,859 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:36:43] 2025-10-12 18:35:30,860 | INFO     | pilot state: finished 
[2025-10-12 20:36:43] 2025-10-12 18:35:30,860 | INFO     | transexitcode: 0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,860 | INFO     | exeerrorcode: 0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,860 | INFO     | exeerrordiag: 
[2025-10-12 20:36:43] 2025-10-12 18:35:30,860 | INFO     | exitcode: 0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,860 | INFO     | exitmsg: OK
[2025-10-12 20:36:43] 2025-10-12 18:35:30,860 | INFO     | cpuconsumptiontime: 53579 s
[2025-10-12 20:36:43] 2025-10-12 18:35:30,860 | INFO     | nevents: 400
[2025-10-12 20:36:43] 2025-10-12 18:35:30,860 | INFO     | neventsw: 0
[2025-10-12 20:36:43] 2025-10-12 18:35:30,860 | INFO     | pid: 10698
[2025-10-12 20:36:43] 2025-10-12 18:35:30,861 | INFO     | pgrp: 10698
[2025-10-12 20:36:43] 2025-10-12 18:35:30,861 | INFO     | corecount: 8
[2025-10-12 20:36:43] 2025-10-12 18:35:30,861 | INFO     | event service: False
[2025-10-12 20:36:43] 2025-10-12 18:35:30,861 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 8: 2349175, 12: 2349203, 13949: 2379431, 13953: 2388429, 13956: 2388485, 14043: 2388679}
[2025-10-12 20:36:43] 2025-10-12 18:35:30,861 | INFO     | --------------------------------------------------
[2025-10-12 20:36:43] 2025-10-12 18:35:30,861 | INFO     | 
[2025-10-12 20:36:43] 2025-10-12 18:35:30,861 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-12 20:36:43] 2025-10-12 18:35:30,988 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,989 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,989 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,989 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,990 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,990 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,990 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,990 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,990 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:36:43] 2025-10-12 18:35:30,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,991 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:36:43] 2025-10-12 18:35:30,991 | INFO     | job 6839387306 has completed (purged errors)
[2025-10-12 20:36:43] 2025-10-12 18:35:30,991 | INFO     | overall cleanup function is called
[2025-10-12 20:36:43] 2025-10-12 18:35:31,999 | INFO     | --- collectZombieJob: --- 10, [10698]
[2025-10-12 20:36:43] 2025-10-12 18:35:32,000 | INFO     | zombie collector waiting for pid 10698
[2025-10-12 20:36:43] 2025-10-12 18:35:32,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:36:43] 2025-10-12 18:35:32,000 | INFO     | collected zombie processes
[2025-10-12 20:36:43] 2025-10-12 18:35:32,000 | INFO     | will attempt to kill all subprocesses of pid=10698
[2025-10-12 20:36:43] 2025-10-12 18:35:32,126 | INFO     | process IDs to be killed: [10698] (in reverse order)
[2025-10-12 20:36:43] 2025-10-12 18:35:32,828 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:36:43] 2025-10-12 18:35:32,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:36:43] 2025-10-12 18:35:32,831 | INFO     | did not find any defunct processes belonging to 10698
[2025-10-12 20:36:43] 2025-10-12 18:35:32,834 | INFO     | did not find any defunct processes belonging to 10698
[2025-10-12 20:36:43] 2025-10-12 18:35:32,835 | INFO     | ready for new job
[2025-10-12 20:36:43] 2025-10-12 18:35:32,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:36:43] 2025-10-12 18:35:32,837 | INFO     | ***************************************
[2025-10-12 20:36:43] 2025-10-12 18:35:32,837 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:36:43] 2025-10-12 18:35:32,837 | INFO     | ***************************************
[2025-10-12 20:36:43] 2025-10-12 18:35:32,838 | INFO     | 
[2025-10-12 20:36:43] 2025-10-12 18:35:32,838 | INFO     | pilot is running in a VM
[2025-10-12 20:36:43] 2025-10-12 18:35:32,838 | INFO     | architecture information:
[2025-10-12 20:36:43] 2025-10-12 18:35:32,839 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:36:43] 2025-10-12 18:35:33,106 | INFO     | cat /etc/os-release:
[2025-10-12 20:36:43] NAME="CentOS Linux"
[2025-10-12 20:36:43] VERSION="7 (Core)"
[2025-10-12 20:36:43] ID="centos"
[2025-10-12 20:36:43] ID_LIKE="rhel fedora"
[2025-10-12 20:36:43] VERSION_ID="7"
[2025-10-12 20:36:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:36:43] ANSI_COLOR="0;31"
[2025-10-12 20:36:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:36:43] HOME_URL="https://www.centos.org/"
[2025-10-12 20:36:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:36:43] 
[2025-10-12 20:36:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:36:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:36:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:36:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:36:43] 
[2025-10-12 20:36:43] 2025-10-12 18:35:33,106 | INFO     | ***************************************
[2025-10-12 20:36:43] 2025-10-12 18:35:33,610 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-12 20:36:43] 2025-10-12 18:35:33,802 | INFO     | sufficient remaining disk space (496153657344 B)
[2025-10-12 20:36:43] 2025-10-12 18:35:33,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:36:43] 2025-10-12 18:35:33,802 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:36:43] 2025-10-12 18:35:33,803 | INFO     | update_server=False
[2025-10-12 20:36:43] 2025-10-12 18:35:33,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:36:43] 2025-10-12 18:35:33,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:36:43] 2025-10-12 18:35:33,807 | INFO     | aborting loop
[2025-10-12 20:36:43] 2025-10-12 18:35:33,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:36:43] 2025-10-12 18:35:34,407 | INFO     | all payload control threads have been joined
[2025-10-12 20:36:43] 2025-10-12 18:35:34,574 | INFO     | all data control threads have been joined
[2025-10-12 20:36:43] 2025-10-12 18:35:34,808 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:34,813 | INFO     | [job] validate thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:34,813 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:35,018 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:35,118 | INFO     | all job control threads have been joined
[2025-10-12 20:36:43] 2025-10-12 18:35:35,222 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:35,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:36:43] 2025-10-12 18:35:35,313 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:35,395 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:35,414 | INFO     | [payload] control thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:35,502 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:35,580 | INFO     | [data] control thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:35,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:36:43] 2025-10-12 18:35:35,957 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:35,994 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:36,124 | INFO     | [job] control thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:36,136 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:36,878 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:35:39,303 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:36:43] 2025-10-12 18:36:02,759 | INFO     | PID=4220 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 20:36:43] 2025-10-12 18:36:02,760 | INFO     | .. there are 9 such processes running
[2025-10-12 20:36:43] 2025-10-12 18:36:02,761 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:36:43] 2025-10-12 18:36:02,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:36:43] 2025-10-12 18:36:02,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:36:43] 2025-10-12 18:36:32,601 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:36:43] 2025-10-12 18:36:33,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414778263360)>', '<ExcThread(monitor, started 140414308816640)>']
[2025-10-12 20:36:43] 2025-10-12 18:36:33,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:36:43] 2025-10-12 18:36:33,945 | INFO     | [monitor] control thread has ended
[2025-10-12 20:36:43] 2025-10-12 18:36:38,044 | INFO     | all workflow threads have been joined
[2025-10-12 20:36:43] 2025-10-12 18:36:38,045 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:36:43] 2025-10-12 18:36:38,045 | INFO     | traces error code: 0
[2025-10-12 20:36:43] 2025-10-12 18:36:38,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:36:43] 2025-10-12 18:36:38,510 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:36:43] 2025-10-12 18:36:38,603 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:36:43] 2025-10-12 18:36:38,686 [wrapper] pilotpid: 4220
[2025-10-12 20:36:43] 2025-10-12 18:36:38,764 [wrapper] Pilot exit status: 0
[2025-10-12 20:36:43] 2025-10-12 18:36:39,132 [wrapper] pandaids: 6839387306
[2025-10-12 20:36:43] 2025-10-12 18:36:40,075 [wrapper] cleanup supervisor_pilot 17717 4221
[2025-10-12 20:36:43] 2025-10-12 18:36:40,195 [wrapper] Test setup, not cleaning
[2025-10-12 20:36:43] 2025-10-12 18:36:40,295 [wrapper] apfmon messages muted
[2025-10-12 20:36:43] 2025-10-12 18:36:40,449 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:36:43] 2025-10-12 18:36:40,498 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:36:43]  *** Error codes and diagnostics ***
[2025-10-12 20:36:43]     "exeErrorCode": 0,
[2025-10-12 20:36:43]     "exeErrorDiag": "",
[2025-10-12 20:36:43]     "pilotErrorCode": 0,
[2025-10-12 20:36:43]     "pilotErrorDiag": "",
[2025-10-12 20:36:43]  *** Listing of results directory ***
[2025-10-12 20:36:43] total 408324
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:11 pilot3.tar.gz
[2025-10-12 20:36:43] -rwx------. 1 boinc boinc     36292 Oct 12 06:27 runpilot2-wrapper.sh
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc      5112 Oct 12 06:27 queuedata.json
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:36:43] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:39 run_atlas
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:39 job.xml
[2025-10-12 20:36:43] -rw-r--r--. 2 boinc boinc 220909111 Oct 12 16:39 EVNT.46676267._004060.pool.root.1
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc      6390 Oct 12 16:39 init_data.xml
[2025-10-12 20:36:43] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:39 start_atlas.sh
[2025-10-12 20:36:43] drwxrwx--x. 2 boinc boinc        68 Oct 12 16:39 shared
[2025-10-12 20:36:43] -rw-r--r--. 2 boinc boinc    569674 Oct 12 16:39 input.tar.gz
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:39 boinc_lockfile
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc      2550 Oct 12 16:39 pandaJob.out
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc    975528 Oct 12 16:41 agis_schedconf.cvmfs.json
[2025-10-12 20:36:43] drwx------. 5 boinc boinc      4096 Oct 12 16:41 pilot3
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc 188652597 Oct 12 20:32 HITS.46676269._071237.pool.root.1
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc       531 Oct 12 20:33 boinc_task_state.xml
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc      1018 Oct 12 20:33 memory_monitor_summary.json
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc   1560580 Oct 12 20:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc    449606 Oct 12 20:33 log.46676269._071237.job.log.tgz.1
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc      7777 Oct 12 20:35 heartbeat.json
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc        95 Oct 12 20:36 pilot_heartbeat.json
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc      4883 Oct 12 20:36 pilotlog.txt
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc      8192 Oct 12 20:36 boinc_mmap_file
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc        28 Oct 12 20:36 wrapper_checkpoint.txt
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc   1890053 Oct 12 20:36 log.46676269._071237.job.log.1
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc       357 Oct 12 20:36 output.list
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc       620 Oct 12 20:36 runtime_log
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc   2355200 Oct 12 20:36 result.tar.gz
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc       656 Oct 12 20:36 WDaKDmmr2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0DTMDmLK1tPn.diag
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc      8703 Oct 12 20:36 runtime_log.err
[2025-10-12 20:36:43] -rw-r--r--. 1 boinc boinc     20579 Oct 12 20:36 stderr.txt
[2025-10-12 20:36:43] HITS file was successfully produced:
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc 188652597 Oct 12 20:32 shared/HITS.pool.root.1
[2025-10-12 20:36:43]  *** Contents of shared directory: ***
[2025-10-12 20:36:43] total 402840
[2025-10-12 20:36:43] -rw-r--r--. 2 boinc boinc 220909111 Oct 12 16:39 ATLAS.root_0
[2025-10-12 20:36:43] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:39 start_atlas.sh
[2025-10-12 20:36:43] -rw-r--r--. 2 boinc boinc    569674 Oct 12 16:39 input.tar.gz
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc 188652597 Oct 12 20:32 HITS.pool.root.1
[2025-10-12 20:36:43] -rw-------. 1 boinc boinc   2355200 Oct 12 20:36 result.tar.gz
20:36:45 (312): run_atlas exited; CPU time 53756.789548
20:36:45 (312): called boinc_finish(0)

</stderr_txt>
]]>

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