Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:29:21 (972): wrapper (7.7.26015): starting
12:29:21 (972): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:29:21] Arguments: --nthreads 8
[2025-10-12 12:29:21] Threads: 8
[2025-10-12 12:29:21] Checking for CVMFS
[2025-10-12 12:29:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:29:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:29:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:29:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:29:28] 2.11.2.0 16160 220308 137808 151617 2 11 23702618 25165825 4632 130560 0 115934545 99.879 65031158 3241 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 12:29:28] CVMFS is ok
[2025-10-12 12:29:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:29:28] Checking for apptainer binary...
[2025-10-12 12:29:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:29:28] Running /usr/bin/apptainer --version
[2025-10-12 12:29:28] apptainer version 1.3.2-1.el7
[2025-10-12 12:29:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:29:35] cg-vwn457.simple-grid.lan
[2025-10-12 12:29:35] apptainer works
[2025-10-12 12:29:35] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:29:35] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:29:35] Starting ATLAS job with PandaID=6839588743
[2025-10-12 12:29:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:14:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:14:08] 2025-10-12 14:13:20,324 | INFO     | sum of square deviations: 2750295288.0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,326 | INFO     | sum of deviations: 85916566604.99997
[2025-10-12 16:14:08] 2025-10-12 14:13:20,326 | INFO     | mean x: 1760271967.0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,326 | INFO     | mean y: 2436997.183574879
[2025-10-12 16:14:08] 2025-10-12 14:13:20,326 | INFO     | -- intersect: -54986757928.735886
[2025-10-12 16:14:08] 2025-10-12 14:13:20,326 | INFO     | intersect: -54986757928.735886
[2025-10-12 16:14:08] 2025-10-12 14:13:20,326 | INFO     | chi2: 6.07746374474224
[2025-10-12 16:14:08] 2025-10-12 14:13:20,327 | INFO     | sum of square deviations: 2555770710.5
[2025-10-12 16:14:08] 2025-10-12 14:13:20,336 | INFO     | sum of deviations: 83790419413.00002
[2025-10-12 16:14:08] 2025-10-12 14:13:20,337 | INFO     | mean x: 1760271814.5
[2025-10-12 16:14:08] 2025-10-12 14:13:20,337 | INFO     | mean y: 2435330.079207921
[2025-10-12 16:14:08] 2025-10-12 14:13:20,337 | INFO     | -- intersect: -57707715667.37959
[2025-10-12 16:14:08] 2025-10-12 14:13:20,337 | INFO     | intersect: -57707715667.37959
[2025-10-12 16:14:08] 2025-10-12 14:13:20,338 | INFO     | chi2: 6.090846430023148
[2025-10-12 16:14:08] 2025-10-12 14:13:20,338 | INFO     | current chi2=6.090846430023148 (change=-0.22020181185754112 %)
[2025-10-12 16:14:08] 2025-10-12 14:13:20,338 | INFO     | right removable region: 201
[2025-10-12 16:14:08] 2025-10-12 14:13:20,338 | INFO     | sum of square deviations: 2555770710.5
[2025-10-12 16:14:08] 2025-10-12 14:13:20,340 | INFO     | sum of deviations: 15132534526.500006
[2025-10-12 16:14:08] 2025-10-12 14:13:20,340 | INFO     | mean x: 1760272119.5
[2025-10-12 16:14:08] 2025-10-12 14:13:20,340 | INFO     | mean y: 2492437.202970297
[2025-10-12 16:14:08] 2025-10-12 14:13:20,340 | INFO     | -- intersect: -10419952156.489815
[2025-10-12 16:14:08] 2025-10-12 14:13:20,340 | INFO     | intersect: -10419952156.489815
[2025-10-12 16:14:08] 2025-10-12 14:13:20,340 | INFO     | chi2: 1.2661379360746277
[2025-10-12 16:14:08] 2025-10-12 14:13:20,341 | INFO     | current chi2=1.2661379360746277 (change=79.166672328239 %)
[2025-10-12 16:14:08] 2025-10-12 14:13:20,341 | INFO     | sum of square deviations: 2370641658.0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,342 | INFO     | sum of deviations: -14314544748.000002
[2025-10-12 16:14:08] 2025-10-12 14:13:20,343 | INFO     | mean x: 1760272272.0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,343 | INFO     | mean y: 2516464.964467005
[2025-10-12 16:14:08] 2025-10-12 14:13:20,343 | INFO     | -- intersect: 10631493696.160843
[2025-10-12 16:14:08] 2025-10-12 14:13:20,343 | INFO     | intersect: 10631493696.160843
[2025-10-12 16:14:08] 2025-10-12 14:13:20,343 | INFO     | chi2: 0.12076353338735026
[2025-10-12 16:14:08] 2025-10-12 14:13:20,343 | INFO     | current chi2=0.12076353338735026 (change=90.46205551965767 %)
[2025-10-12 16:14:08] 2025-10-12 14:13:20,344 | INFO     | sum of square deviations: 2194675568.0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,345 | INFO     | sum of deviations: -10241454608.500006
[2025-10-12 16:14:08] 2025-10-12 14:13:20,345 | INFO     | mean x: 1760272424.5
[2025-10-12 16:14:08] 2025-10-12 14:13:20,345 | INFO     | mean y: 2512901.5260416665
[2025-10-12 16:14:08] 2025-10-12 14:13:20,346 | INFO     | -- intersect: 8216825029.008114
[2025-10-12 16:14:08] 2025-10-12 14:13:20,346 | INFO     | intersect: 8216825029.008114
[2025-10-12 16:14:08] 2025-10-12 14:13:20,346 | INFO     | chi2: 0.10246180769848083
[2025-10-12 16:14:08] 2025-10-12 14:13:20,346 | INFO     | current chi2=0.10246180769848083 (change=15.155010105713332 %)
[2025-10-12 16:14:08] 2025-10-12 14:13:20,346 | INFO     | left removable region: 30
[2025-10-12 16:14:08] 2025-10-12 14:13:20,347 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,348 | INFO     | sum of deviations: 4451116259.0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,348 | INFO     | mean x: 1760272699.0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,348 | INFO     | mean y: 2498712.730994152
[2025-10-12 16:14:08] 2025-10-12 14:13:20,348 | INFO     | -- intersect: -5051056191.778577
[2025-10-12 16:14:08] 2025-10-12 14:13:20,348 | INFO     | intersect: -5051056191.778577
[2025-10-12 16:14:08] 2025-10-12 14:13:20,348 | INFO     | chi2: 0.0014862283145837556
[2025-10-12 16:14:08] 2025-10-12 14:13:20,349 | INFO     | -- intersect: -5051056191.778577
[2025-10-12 16:14:08] 2025-10-12 14:13:20,349 | INFO     | current memory leak: 2.87 B/s (using 171 data points, chi2=0.00)
[2025-10-12 16:14:08] 2025-10-12 14:13:20,349 | INFO     | could have reported an average CPU frequency of 2250 MHz (10 samples)
[2025-10-12 16:14:08] 2025-10-12 14:13:20,350 | INFO     | ..............................
[2025-10-12 16:14:08] 2025-10-12 14:13:20,350 | INFO     | . Timing measurements:
[2025-10-12 16:14:08] 2025-10-12 14:13:20,350 | INFO     | . get job = 0 s
[2025-10-12 16:14:08] 2025-10-12 14:13:20,350 | INFO     | . initial setup = 5 s
[2025-10-12 16:14:08] 2025-10-12 14:13:20,350 | INFO     | . payload setup = 126 s
[2025-10-12 16:14:08] 2025-10-12 14:13:20,350 | INFO     | . stage-in = 0 s
[2025-10-12 16:14:08] 2025-10-12 14:13:20,350 | INFO     | . payload execution = 12762 s
[2025-10-12 16:14:08] 2025-10-12 14:13:20,350 | INFO     | . stage-out = 2 s
[2025-10-12 16:14:08] 2025-10-12 14:13:20,350 | INFO     | . log creation = 0 s
[2025-10-12 16:14:08] 2025-10-12 14:13:20,350 | INFO     | ..............................
[2025-10-12 16:14:08] 2025-10-12 14:13:20,614 | INFO     | 
[2025-10-12 16:14:08] 2025-10-12 14:13:20,614 | INFO     | job summary report
[2025-10-12 16:14:08] 2025-10-12 14:13:20,614 | INFO     | --------------------------------------------------
[2025-10-12 16:14:08] 2025-10-12 14:13:20,614 | INFO     | PanDA job id: 6839588743
[2025-10-12 16:14:08] 2025-10-12 14:13:20,614 | INFO     | task id: 46676269
[2025-10-12 16:14:08] 2025-10-12 14:13:20,614 | INFO     | errors: (none)
[2025-10-12 16:14:08] 2025-10-12 14:13:20,614 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | pilot state: finished 
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | transexitcode: 0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | exeerrorcode: 0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | exeerrordiag: 
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | exitcode: 0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | exitmsg: OK
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | cpuconsumptiontime: 47054 s
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | nevents: 400
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | neventsw: 0
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | pid: 11644
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | pgrp: 11644
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | corecount: 8
[2025-10-12 16:14:08] 2025-10-12 14:13:20,615 | INFO     | event service: False
[2025-10-12 16:14:08] 2025-10-12 14:13:20,616 | INFO     | sizes: {0: 2348637, 1: 2348836, 12: 2348836, 22: 2348864, 33: 2348892, 44: 2348948, 54: 2349104, 65: 2349132, 76: 2349160, 87: 2349216, 93: 2349506, 97: 2349814, 1
[2025-10-12 16:14:08] 2025-10-12 14:13:20,616 | INFO     | --------------------------------------------------
[2025-10-12 16:14:08] 2025-10-12 14:13:20,616 | INFO     | 
[2025-10-12 16:14:08] 2025-10-12 14:13:20,616 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-12 16:14:08] 2025-10-12 14:13:21,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,222 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,222 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,222 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,223 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:14:08] 2025-10-12 14:13:21,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:14:08] 2025-10-12 14:13:21,223 | INFO     | job 6839588743 has completed (purged errors)
[2025-10-12 16:14:08] 2025-10-12 14:13:21,224 | INFO     | overall cleanup function is called
[2025-10-12 16:14:08] 2025-10-12 14:13:22,234 | INFO     | --- collectZombieJob: --- 10, [11644]
[2025-10-12 16:14:08] 2025-10-12 14:13:22,234 | INFO     | zombie collector waiting for pid 11644
[2025-10-12 16:14:08] 2025-10-12 14:13:22,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:14:08] 2025-10-12 14:13:22,234 | INFO     | collected zombie processes
[2025-10-12 16:14:08] 2025-10-12 14:13:22,234 | INFO     | will attempt to kill all subprocesses of pid=11644
[2025-10-12 16:14:08] 2025-10-12 14:13:22,340 | INFO     | process IDs to be killed: [11644] (in reverse order)
[2025-10-12 16:14:08] 2025-10-12 14:13:23,107 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:14:08] 2025-10-12 14:13:23,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:14:08] 2025-10-12 14:13:23,111 | INFO     | did not find any defunct processes belonging to 11644
[2025-10-12 16:14:08] 2025-10-12 14:13:23,114 | INFO     | did not find any defunct processes belonging to 11644
[2025-10-12 16:14:08] 2025-10-12 14:13:23,115 | INFO     | ready for new job
[2025-10-12 16:14:08] 2025-10-12 14:13:23,115 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:14:08] 2025-10-12 14:13:23,117 | INFO     | ***************************************
[2025-10-12 16:14:08] 2025-10-12 14:13:23,117 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:14:08] 2025-10-12 14:13:23,117 | INFO     | ***************************************
[2025-10-12 16:14:08] 2025-10-12 14:13:23,117 | INFO     | 
[2025-10-12 16:14:08] 2025-10-12 14:13:23,118 | INFO     | pilot is running in a VM
[2025-10-12 16:14:08] 2025-10-12 14:13:23,118 | INFO     | architecture information:
[2025-10-12 16:14:08] 2025-10-12 14:13:23,133 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:14:08] 2025-10-12 14:13:23,376 | INFO     | cat /etc/os-release:
[2025-10-12 16:14:08] NAME="CentOS Linux"
[2025-10-12 16:14:08] VERSION="7 (Core)"
[2025-10-12 16:14:08] ID="centos"
[2025-10-12 16:14:08] ID_LIKE="rhel fedora"
[2025-10-12 16:14:08] VERSION_ID="7"
[2025-10-12 16:14:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:14:08] ANSI_COLOR="0;31"
[2025-10-12 16:14:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:14:08] HOME_URL="https://www.centos.org/"
[2025-10-12 16:14:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:14:08] 
[2025-10-12 16:14:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:14:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:14:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:14:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:14:08] 
[2025-10-12 16:14:08] 2025-10-12 14:13:23,376 | INFO     | ***************************************
[2025-10-12 16:14:08] 2025-10-12 14:13:23,880 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-12 16:14:08] 2025-10-12 14:13:24,015 | INFO     | sufficient remaining disk space (495910387712 B)
[2025-10-12 16:14:08] 2025-10-12 14:13:24,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:14:08] 2025-10-12 14:13:24,016 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:14:08] 2025-10-12 14:13:24,016 | INFO     | update_server=False
[2025-10-12 16:14:08] 2025-10-12 14:13:24,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:14:08] 2025-10-12 14:13:24,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:14:08] 2025-10-12 14:13:24,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:14:08] 2025-10-12 14:13:24,090 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 16:14:08] 2025-10-12 14:13:24,090 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 16:14:08] 2025-10-12 14:13:24,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:14:08] 2025-10-12 14:13:24,090 | INFO     | will abort loop
[2025-10-12 16:14:08] 2025-10-12 14:13:24,355 | INFO     | all payload control threads have been joined
[2025-10-12 16:14:08] 2025-10-12 14:13:24,722 | INFO     | all data control threads have been joined
[2025-10-12 16:14:08] 2025-10-12 14:13:25,026 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:25,063 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:25,096 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:25,297 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:25,361 | INFO     | [payload] control thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:25,382 | INFO     | all job control threads have been joined
[2025-10-12 16:14:08] 2025-10-12 14:13:25,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:14:08] 2025-10-12 14:13:25,538 | INFO     | [job] validate thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:25,728 | INFO     | [data] control thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:25,803 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:26,025 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:26,084 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:26,138 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:26,301 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:26,389 | INFO     | [job] control thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:26,543 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:28,030 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:34,684 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:14:08] 2025-10-12 14:13:35,690 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:14:08] 2025-10-12 14:13:53,010 | INFO     | PID=5107 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 16:14:08] 2025-10-12 14:13:53,010 | INFO     | .. there are 9 such processes running
[2025-10-12 16:14:08] 2025-10-12 14:13:53,012 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:14:08] 2025-10-12 14:13:53,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:14:08] 2025-10-12 14:13:53,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:14:08] 2025-10-12 14:13:57,930 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:14:08] 2025-10-12 14:13:57,957 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700072720192)>', '<ExcThread(monitor, started 139699641378560)>']
[2025-10-12 16:14:08] 2025-10-12 14:13:58,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:14:08] 2025-10-12 14:13:58,041 | INFO     | [monitor] control thread has ended
[2025-10-12 16:14:08] 2025-10-12 14:14:02,983 | INFO     | all workflow threads have been joined
[2025-10-12 16:14:08] 2025-10-12 14:14:02,983 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:14:08] 2025-10-12 14:14:02,983 | INFO     | traces error code: 0
[2025-10-12 16:14:08] 2025-10-12 14:14:02,983 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:14:08] 2025-10-12 14:14:03,365 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:14:08] 2025-10-12 14:14:03,454 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:14:08] 2025-10-12 14:14:03,586 [wrapper] pilotpid: 5107
[2025-10-12 16:14:08] 2025-10-12 14:14:03,700 [wrapper] Pilot exit status: 0
[2025-10-12 16:14:08] 2025-10-12 14:14:04,292 [wrapper] pandaids: 6839588743
[2025-10-12 16:14:08] 2025-10-12 14:14:05,261 [wrapper] cleanup supervisor_pilot  1402 5108
[2025-10-12 16:14:08] 2025-10-12 14:14:05,399 [wrapper] Test setup, not cleaning
[2025-10-12 16:14:08] 2025-10-12 14:14:05,511 [wrapper] apfmon messages muted
[2025-10-12 16:14:08] 2025-10-12 14:14:05,617 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:14:08] 2025-10-12 14:14:05,664 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:14:08]  *** Error codes and diagnostics ***
[2025-10-12 16:14:08]     "exeErrorCode": 0,
[2025-10-12 16:14:08]     "exeErrorDiag": "",
[2025-10-12 16:14:08]     "pilotErrorCode": 0,
[2025-10-12 16:14:08]     "pilotErrorDiag": "",
[2025-10-12 16:14:08]  *** Listing of results directory ***
[2025-10-12 16:14:08] total 410172
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc    557409 Oct 12 07:26 pilot3.tar.gz
[2025-10-12 16:14:08] -rwx------. 1 boinc boinc     36292 Oct 12 07:28 runpilot2-wrapper.sh
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc      5112 Oct 12 07:28 queuedata.json
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc       100 Oct 12 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:14:08] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 12:29 run_atlas
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc       105 Oct 12 12:29 job.xml
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc      6391 Oct 12 12:29 init_data.xml
[2025-10-12 16:14:08] -rw-r--r--. 2 boinc boinc 219524047 Oct 12 12:29 EVNT.46676267._001450.pool.root.1
[2025-10-12 16:14:08] -rw-r--r--. 2 boinc boinc     15120 Oct 12 12:29 start_atlas.sh
[2025-10-12 16:14:08] drwxrwx--x. 2 boinc boinc        68 Oct 12 12:29 shared
[2025-10-12 16:14:08] -rw-r--r--. 2 boinc boinc    569680 Oct 12 12:29 input.tar.gz
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc         0 Oct 12 12:29 boinc_lockfile
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc      2550 Oct 12 12:29 pandaJob.out
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc    975520 Oct 12 12:33 agis_schedconf.cvmfs.json
[2025-10-12 16:14:08] drwx------. 5 boinc boinc      4096 Oct 12 12:33 pilot3
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc 192150553 Oct 12 16:10 HITS.46676269._071935.pool.root.1
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc       531 Oct 12 16:11 boinc_task_state.xml
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc      1020 Oct 12 16:11 memory_monitor_summary.json
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc   1560580 Oct 12 16:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc    452200 Oct 12 16:11 log.46676269._071935.job.log.tgz.1
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc      7781 Oct 12 16:13 heartbeat.json
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc        95 Oct 12 16:13 pilot_heartbeat.json
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc      8192 Oct 12 16:14 boinc_mmap_file
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc        28 Oct 12 16:14 wrapper_checkpoint.txt
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc      5142 Oct 12 16:14 pilotlog.txt
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc   1775478 Oct 12 16:14 log.46676269._071935.job.log.1
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc       357 Oct 12 16:14 output.list
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc       620 Oct 12 16:14 runtime_log
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc   2242560 Oct 12 16:14 result.tar.gz
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc      8717 Oct 12 16:14 runtime_log.err
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc       657 Oct 12 16:14 4WoMDmyn3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8jiNDmbyyOjn.diag
[2025-10-12 16:14:08] -rw-r--r--. 1 boinc boinc     20657 Oct 12 16:14 stderr.txt
[2025-10-12 16:14:08] HITS file was successfully produced:
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc 192150553 Oct 12 16:10 shared/HITS.pool.root.1
[2025-10-12 16:14:08]  *** Contents of shared directory: ***
[2025-10-12 16:14:08] total 404796
[2025-10-12 16:14:08] -rw-r--r--. 2 boinc boinc 219524047 Oct 12 12:29 ATLAS.root_0
[2025-10-12 16:14:08] -rw-r--r--. 2 boinc boinc     15120 Oct 12 12:29 start_atlas.sh
[2025-10-12 16:14:08] -rw-r--r--. 2 boinc boinc    569680 Oct 12 12:29 input.tar.gz
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc 192150553 Oct 12 16:10 HITS.pool.root.1
[2025-10-12 16:14:08] -rw-------. 1 boinc boinc   2242560 Oct 12 16:14 result.tar.gz
16:14:09 (972): run_atlas exited; CPU time 47216.083961
16:14:09 (972): called boinc_finish(0)

</stderr_txt>
]]>

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