Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:53:31 (3614264): wrapper (7.7.26015): starting
23:53:31 (3614264): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 23:53:31] Arguments: --nthreads 3
[2025-10-12 23:53:31] Threads: 3
[2025-10-12 23:53:31] Checking for CVMFS
[2025-10-12 23:53:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:53:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:53:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:53:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:53:31] 2.9.2.0 2117043 4970 86584 151638 2 57 33702062 36864000 0 130560 0 3939527 99.991 173255 847 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 23:53:31] CVMFS is ok
[2025-10-12 23:53:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:53:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:53:31] Further information can be found at the LHC@home message board.
[2025-10-12 23:53:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:53:31] Checking for apptainer binary...
[2025-10-12 23:53:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:53:31] Running /usr/bin/apptainer --version
[2025-10-12 23:53:31] apptainer version 1.4.1-1.1
[2025-10-12 23:53:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:53:31] cosA127b
[2025-10-12 23:53:31] apptainer works
[2025-10-12 23:53:31] Set ATHENA_PROC_NUMBER=3
[2025-10-12 23:53:31] Set ATHENA_CORE_NUMBER=3
[2025-10-12 23:53:31] Starting ATLAS job with PandaID=6830857146
[2025-10-12 23:53:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:06:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:06:47]  scope=mc23_13p6TeV
[2025-10-13 01:06:47]  status=None
[2025-10-13 01:06:47]  status_code=0
[2025-10-13 01:06:47]  storage_token=
[2025-10-13 01:06:47]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6830857146/log.46376905._075042.job.log.tgz.1
[2025-10-13 01:06:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/99/log.46376905._075042.job.log.tgz.1
[2025-10-13 01:06:47]  workdir=None
[2025-10-13 01:06:47] ]
[2025-10-13 01:06:47] 2025-10-12 23:06:03,114 | INFO     | transferring file log.46376905._075042.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6830857146/log.46376905._075042.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 01:06:47] 2025-10-12 23:06:03,114 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6830857146/log.46376905._075042.job.log.tgz.1 /local/data/boinc/slots/0/log.46376905._0750
[2025-10-13 01:06:47] 2025-10-12 23:06:03,126 | INFO     | adding to output.list: log.46376905._075042.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/99/log.46376905._075042.job.log.tg
[2025-10-13 01:06:47] 2025-10-12 23:06:03,127 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:06:47] 2025-10-12 23:06:03,127 | INFO     | summary of transferred files:
[2025-10-13 01:06:47] 2025-10-12 23:06:03,127 | INFO     |  -- lfn=log.46376905._075042.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:06:47] 2025-10-12 23:06:03,127 | INFO     | stage-out finished correctly
[2025-10-13 01:06:47] 2025-10-12 23:06:04,380 | INFO     | monitor loop #336: job 0:6830857146 is in state 'finished'
[2025-10-13 01:06:47] 2025-10-12 23:06:04,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:06:47] 2025-10-12 23:06:04,503 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:06:47] 2025-10-12 23:06:04,973 | INFO     | time since job start (4347s) is within the limit (172800.0s)
[2025-10-13 01:06:47] 2025-10-12 23:06:05,057 | INFO     | job 6830857146 has state=finished
[2025-10-13 01:06:47] 2025-10-12 23:06:05,058 | INFO     | preparing for final server update for job 6830857146 in state='finished'
[2025-10-13 01:06:47] 2025-10-12 23:06:05,058 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:06:47] 2025-10-12 23:06:05,058 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:06:47] 2025-10-12 23:06:05,058 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:06:47] 2025-10-12 23:06:05,058 | INFO     | job 6830857146 has finished - writing final server update
[2025-10-13 01:06:47] 2025-10-12 23:06:05,059 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:06:47] 2025-10-12 23:06:05,059 | INFO     | executing command: lscpu
[2025-10-13 01:06:47] 2025-10-12 23:06:05,075 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:06:47] 2025-10-12 23:06:06,883 | INFO     | monitor loop #337: job 0:6830857146 is in state 'finished'
[2025-10-13 01:06:47] 2025-10-12 23:06:06,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:06:47] 2025-10-12 23:06:06,980 | INFO     | time since job start (4349s) is within the limit (172800.0s)
[2025-10-13 01:06:47] 2025-10-12 23:06:08,985 | INFO     | time since job start (4351s) is within the limit (172800.0s)
[2025-10-13 01:06:47] 2025-10-12 23:06:09,386 | INFO     | monitor loop #338: job 0:6830857146 is in state 'finished'
[2025-10-13 01:06:47] 2025-10-12 23:06:09,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:06:47] 2025-10-12 23:06:10,217 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:06:47] 2025-10-12 23:06:10,218 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3746.1095
[2025-10-13 01:06:47] 2025-10-12 23:06:10,219 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6830857146/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:06:47] 2025-10-12 23:06:10,220 | INFO     | extracted standard info from prmon json
[2025-10-13 01:06:47] 2025-10-12 23:06:10,220 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:06:47] 2025-10-12 23:06:10,220 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:06:47] 2025-10-12 23:06:10,220 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:06:47] 2025-10-12 23:06:10,220 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | sum of square deviations: 81266640.0
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | sum of deviations: -3173874103.0
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | mean x: 1760308262.5
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | mean y: 2375595.1875
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | -- intersect: 68751333441.18282
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | intersect: 68751333441.18282
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | chi2: 0.10877504730632406
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | -- intersect: 68751333441.18282
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | current memory leak: -39.06 B/s (using 64 data points, chi2=0.11)
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | could have reported an average CPU frequency of 3847 MHz (6 samples)
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | ..............................
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | . Timing measurements:
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | . get job = 0 s
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | . initial setup = 1 s
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | . payload setup = 2 s
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | . stage-in = 0 s
[2025-10-13 01:06:47] 2025-10-12 23:06:10,221 | INFO     | . payload execution = 4325 s
[2025-10-13 01:06:47] 2025-10-12 23:06:10,222 | INFO     | . stage-out = 0 s
[2025-10-13 01:06:47] 2025-10-12 23:06:10,222 | INFO     | . log creation = 0 s
[2025-10-13 01:06:47] 2025-10-12 23:06:10,222 | INFO     | ..............................
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | 
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | job summary report
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | --------------------------------------------------
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | PanDA job id: 6830857146
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | task id: 46376905
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | errors: (none)
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | pilot state: finished 
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | transexitcode: 0
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | exeerrorcode: 0
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | exeerrordiag: 
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | exitcode: 0
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | exitmsg: OK
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | cpuconsumptiontime: 12300 s
[2025-10-13 01:06:47] 2025-10-12 23:06:10,252 | INFO     | nevents: 400
[2025-10-13 01:06:47] 2025-10-12 23:06:10,253 | INFO     | neventsw: 0
[2025-10-13 01:06:47] 2025-10-12 23:06:10,253 | INFO     | pid: 3624414
[2025-10-13 01:06:47] 2025-10-12 23:06:10,253 | INFO     | pgrp: 3624414
[2025-10-13 01:06:47] 2025-10-12 23:06:10,253 | INFO     | corecount: 3
[2025-10-13 01:06:47] 2025-10-12 23:06:10,253 | INFO     | event service: False
[2025-10-13 01:06:47] 2025-10-12 23:06:10,253 | INFO     | sizes: {0: 2348769, 2: 2349031, 10: 2349059, 4331: 2375300, 4332: 2384304, 4334: 2384360, 4340: 2384682}
[2025-10-13 01:06:47] 2025-10-12 23:06:10,253 | INFO     | --------------------------------------------------
[2025-10-13 01:06:47] 2025-10-12 23:06:10,253 | INFO     | 
[2025-10-13 01:06:47] 2025-10-12 23:06:10,253 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | job 6830857146 has completed (purged errors)
[2025-10-13 01:06:47] 2025-10-12 23:06:10,264 | INFO     | overall cleanup function is called
[2025-10-13 01:06:47] 2025-10-12 23:06:11,271 | INFO     | --- collectZombieJob: --- 10, [3624414]
[2025-10-13 01:06:47] 2025-10-12 23:06:11,271 | INFO     | zombie collector waiting for pid 3624414
[2025-10-13 01:06:47] 2025-10-12 23:06:11,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:06:47] 2025-10-12 23:06:11,271 | INFO     | collected zombie processes
[2025-10-13 01:06:47] 2025-10-12 23:06:11,271 | INFO     | will attempt to kill all subprocesses of pid=3624414
[2025-10-13 01:06:47] 2025-10-12 23:06:11,314 | INFO     | process IDs to be killed: [3624414] (in reverse order)
[2025-10-13 01:06:47] 2025-10-12 23:06:11,337 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:06:47] 2025-10-12 23:06:11,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:06:47] 2025-10-12 23:06:11,338 | INFO     | did not find any defunct processes belonging to 3624414
[2025-10-13 01:06:47] 2025-10-12 23:06:11,339 | INFO     | did not find any defunct processes belonging to 3624414
[2025-10-13 01:06:47] 2025-10-12 23:06:11,339 | INFO     | ready for new job
[2025-10-13 01:06:47] 2025-10-12 23:06:11,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:06:47] 2025-10-12 23:06:11,340 | INFO     | ***************************************
[2025-10-13 01:06:47] 2025-10-12 23:06:11,340 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 01:06:47] 2025-10-12 23:06:11,340 | INFO     | ***************************************
[2025-10-13 01:06:47] 2025-10-12 23:06:11,340 | INFO     | 
[2025-10-13 01:06:47] 2025-10-12 23:06:11,340 | INFO     | architecture information:
[2025-10-13 01:06:47] 2025-10-12 23:06:11,341 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:06:47] 2025-10-12 23:06:11,349 | INFO     | cat /etc/os-release:
[2025-10-13 01:06:47] NAME="CentOS Linux"
[2025-10-13 01:06:47] VERSION="7 (Core)"
[2025-10-13 01:06:47] ID="centos"
[2025-10-13 01:06:47] ID_LIKE="rhel fedora"
[2025-10-13 01:06:47] VERSION_ID="7"
[2025-10-13 01:06:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:06:47] ANSI_COLOR="0;31"
[2025-10-13 01:06:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:06:47] HOME_URL="https://www.centos.org/"
[2025-10-13 01:06:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:06:47] 
[2025-10-13 01:06:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:06:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:06:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:06:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:06:47] 
[2025-10-13 01:06:47] 2025-10-12 23:06:11,349 | INFO     | ***************************************
[2025-10-13 01:06:47] 2025-10-12 23:06:11,852 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 01:06:47] 2025-10-12 23:06:11,865 | INFO     | sufficient remaining disk space (325811437568 B)
[2025-10-13 01:06:47] 2025-10-12 23:06:11,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:06:47] 2025-10-12 23:06:11,865 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:06:47] 2025-10-12 23:06:11,865 | INFO     | update_server=False
[2025-10-13 01:06:47] 2025-10-12 23:06:11,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:06:47] 2025-10-12 23:06:11,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:06:47] 2025-10-12 23:06:11,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:06:47] 2025-10-12 23:06:11,889 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 01:06:47] 2025-10-12 23:06:11,889 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 01:06:47] 2025-10-12 23:06:11,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:06:47] 2025-10-12 23:06:11,889 | INFO     | will abort loop
[2025-10-13 01:06:47] 2025-10-12 23:06:12,451 | INFO     | all job control threads have been joined
[2025-10-13 01:06:47] 2025-10-12 23:06:12,455 | INFO     | all data control threads have been joined
[2025-10-13 01:06:47] 2025-10-12 23:06:12,665 | INFO     | all payload control threads have been joined
[2025-10-13 01:06:47] 2025-10-12 23:06:12,871 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:12,871 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:12,877 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:12,895 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:12,931 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:13,314 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:13,456 | INFO     | [job] control thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:13,461 | INFO     | [data] control thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:13,671 | INFO     | [payload] control thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:13,678 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:13,752 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:13,871 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:14,308 | INFO     | [job] validate thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:14,412 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:15,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:06:47] 2025-10-12 23:06:19,053 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:22,104 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:06:47] 2025-10-12 23:06:23,109 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:06:47] 2025-10-12 23:06:41,511 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:06:47] 2025-10-12 23:06:42,094 | INFO     | PID=3617986 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:06:47] 2025-10-12 23:06:42,094 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:06:47] 2025-10-12 23:06:42,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:06:47] 2025-10-12 23:06:42,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:06:47] 2025-10-12 23:06:42,463 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203573892928)>', '<ExcThread(monitor, started 140203075290880)>']
[2025-10-13 01:06:47] 2025-10-12 23:06:43,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:06:47] 2025-10-12 23:06:43,100 | INFO     | [monitor] control thread has ended
[2025-10-13 01:06:47] 2025-10-12 23:06:47,479 | INFO     | all workflow threads have been joined
[2025-10-13 01:06:47] 2025-10-12 23:06:47,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:06:47] 2025-10-12 23:06:47,479 | INFO     | traces error code: 0
[2025-10-13 01:06:47] 2025-10-12 23:06:47,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:06:47] 2025-10-12 23:06:47,528 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:06:47] 2025-10-12 23:06:47,530 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:06:47] 2025-10-12 23:06:47,532 [wrapper] pilotpid: 3617986
[2025-10-13 01:06:47] 2025-10-12 23:06:47,535 [wrapper] Pilot exit status: 0
[2025-10-13 01:06:47] 2025-10-12 23:06:47,542 [wrapper] pandaids: 6830857146
[2025-10-13 01:06:47] 2025-10-12 23:06:47,558 [wrapper] cleanup supervisor_pilot 3634514 3617987
[2025-10-13 01:06:47] 2025-10-12 23:06:47,560 [wrapper] Test setup, not cleaning
[2025-10-13 01:06:47] 2025-10-12 23:06:47,562 [wrapper] apfmon messages muted
[2025-10-13 01:06:47] 2025-10-12 23:06:47,565 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:06:47] 2025-10-12 23:06:47,567 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:06:47]  *** Error codes and diagnostics ***
[2025-10-13 01:06:47]     "exeErrorCode": 0,
[2025-10-13 01:06:47]     "exeErrorDiag": "",
[2025-10-13 01:06:47]     "pilotErrorCode": 0,
[2025-10-13 01:06:47]     "pilotErrorDiag": "",
[2025-10-13 01:06:47]  *** Listing of results directory ***
[2025-10-13 01:06:47] total 386716
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc    552446 Oct  5 05:27 pilot3.tar.gz
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc      5112 Oct  5 05:40 queuedata.json
[2025-10-13 01:06:47] -rwx------ 1 boinc boinc     36292 Oct  5 05:41 runpilot2-wrapper.sh
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:06:47] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:53 run_atlas
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:53 job.xml
[2025-10-13 01:06:47] -rw-r--r-- 2 boinc boinc 212832978 Oct 12 23:53 EVNT.46376901._001201.pool.root.1
[2025-10-13 01:06:47] -rw-r--r-- 2 boinc boinc    565608 Oct 12 23:53 input.tar.gz
[2025-10-13 01:06:47] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:53 start_atlas.sh
[2025-10-13 01:06:47] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:53 shared
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:53 boinc_setup_complete
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc      6441 Oct 12 23:53 init_data.xml
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:53 boinc_lockfile
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc      2519 Oct 12 23:53 pandaJob.out
[2025-10-13 01:06:47] -rw------- 1 boinc boinc    975528 Oct 12 23:53 agis_schedconf.cvmfs.json
[2025-10-13 01:06:47] -rw------- 1 boinc boinc   1560580 Oct 12 23:53 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:06:47] drwx------ 4 boinc boinc      4096 Oct 12 23:53 pilot3
[2025-10-13 01:06:47] -rw------- 1 boinc boinc 177506818 Oct 13 01:05 HITS.46376905._075042.pool.root.1
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:05 boinc_task_state.xml
[2025-10-13 01:06:47] -rw------- 1 boinc boinc        95 Oct 13 01:05 pilot_heartbeat.json
[2025-10-13 01:06:47] -rw------- 1 boinc boinc      1020 Oct 13 01:05 memory_monitor_summary.json
[2025-10-13 01:06:47] -rw------- 1 boinc boinc    238768 Oct 13 01:06 log.46376905._075042.job.log.tgz.1
[2025-10-13 01:06:47] -rw------- 1 boinc boinc      7764 Oct 13 01:06 heartbeat.json
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:06 wrapper_checkpoint.txt
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:06 boinc_mmap_file
[2025-10-13 01:06:47] -rw------- 1 boinc boinc      5010 Oct 13 01:06 pilotlog.txt
[2025-10-13 01:06:47] -rw------- 1 boinc boinc    644108 Oct 13 01:06 log.46376905._075042.job.log.1
[2025-10-13 01:06:47] -rw------- 1 boinc boinc       357 Oct 13 01:06 output.list
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:06 runtime_log
[2025-10-13 01:06:47] -rw------- 1 boinc boinc    901120 Oct 13 01:06 result.tar.gz
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc      8787 Oct 13 01:06 runtime_log.err
[2025-10-13 01:06:47] -rw------- 1 boinc boinc       660 Oct 13 01:06 hLUMDm4nUP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjpNNDmMya8Go.diag
[2025-10-13 01:06:47] -rw-r--r-- 1 boinc boinc     21882 Oct 13 01:06 stderr.txt
[2025-10-13 01:06:47] HITS file was successfully produced:
[2025-10-13 01:06:47] -rw------- 1 boinc boinc 177506818 Oct 13 01:05 shared/HITS.pool.root.1
[2025-10-13 01:06:47]  *** Contents of shared directory: ***
[2025-10-13 01:06:47] total 382652
[2025-10-13 01:06:47] -rw-r--r-- 2 boinc boinc 212832978 Oct 12 23:53 ATLAS.root_0
[2025-10-13 01:06:47] -rw-r--r-- 2 boinc boinc    565608 Oct 12 23:53 input.tar.gz
[2025-10-13 01:06:47] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:53 start_atlas.sh
[2025-10-13 01:06:47] -rw------- 1 boinc boinc 177506818 Oct 13 01:05 HITS.pool.root.1
[2025-10-13 01:06:47] -rw------- 1 boinc boinc    901120 Oct 13 01:06 result.tar.gz
01:06:49 (3614264): run_atlas exited; CPU time 12315.420880
01:06:49 (3614264): called boinc_finish(0)

</stderr_txt>
]]>

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