Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:23:52 (2994190): wrapper (7.7.26015): starting
07:23:52 (2994190): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:23:52] Arguments: --nthreads 8
[2025-10-12 07:23:52] Threads: 8
[2025-10-12 07:23:52] Checking for CVMFS
[2025-10-12 07:23:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:23:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:23:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:23:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:23:54] 2.13.2.0 317483 112486 427480 151619 2 310 27855192 40960000 14173 16776704 0 186730604 99.708 145797946 39636 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:23:54] CVMFS is ok
[2025-10-12 07:23:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:23:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:23:54] Further information can be found at the LHC@home message board.
[2025-10-12 07:23:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:23:54] Checking for apptainer binary...
[2025-10-12 07:23:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:23:54] Running /usr/bin/apptainer --version
[2025-10-12 07:23:54] apptainer version 1.4.3-1.el9
[2025-10-12 07:23:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:23:55] c-206-34.aglt2.org
[2025-10-12 07:23:55] apptainer works
[2025-10-12 07:23:55] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:23:55] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:23:55] Starting ATLAS job with PandaID=6839387551
[2025-10-12 07:23:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:58:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:58:30] 2025-10-12 15:57:49,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:58:30] 2025-10-12 15:57:49,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:58:30] 2025-10-12 15:57:49,446 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:58:30] 2025-10-12 15:57:49,447 | INFO     | sum of square deviations: 5835777428.721841
[2025-10-12 11:58:30] 2025-10-12 15:57:49,448 | INFO     | sum of deviations: 99964246856.8571
[2025-10-12 11:58:30] 2025-10-12 15:57:49,448 | INFO     | mean x: 1760276562.1654136
[2025-10-12 11:58:30] 2025-10-12 15:57:49,448 | INFO     | mean y: 2429542.5714285714
[2025-10-12 11:58:30] 2025-10-12 15:57:49,448 | INFO     | -- intersect: -30150317532.839767
[2025-10-12 11:58:30] 2025-10-12 15:57:49,448 | INFO     | intersect: -30150317532.839767
[2025-10-12 11:58:30] 2025-10-12 15:57:49,449 | INFO     | chi2: 8.943857909088505
[2025-10-12 11:58:30] 2025-10-12 15:57:49,449 | INFO     | sum of square deviations: 5512925675.862069
[2025-10-12 11:58:30] 2025-10-12 15:57:49,451 | INFO     | sum of deviations: 132070074620.62068
[2025-10-12 11:58:30] 2025-10-12 15:57:49,451 | INFO     | mean x: 1760276409.689655
[2025-10-12 11:58:30] 2025-10-12 15:57:49,451 | INFO     | mean y: 2444520.674329502
[2025-10-12 11:58:30] 2025-10-12 15:57:49,451 | INFO     | -- intersect: -42167512132.020355
[2025-10-12 11:58:30] 2025-10-12 15:57:49,451 | INFO     | intersect: -42167512132.020355
[2025-10-12 11:58:30] 2025-10-12 15:57:49,451 | INFO     | chi2: 7.5488532357062885
[2025-10-12 11:58:30] 2025-10-12 15:57:49,451 | INFO     | current chi2=7.5488532357062885 (change=15.59734834298576 %)
[2025-10-12 11:58:30] 2025-10-12 15:57:49,451 | INFO     | right removable region: 260
[2025-10-12 11:58:30] 2025-10-12 15:57:49,452 | INFO     | sum of square deviations: 5512687407.088096
[2025-10-12 11:58:30] 2025-10-12 15:57:49,453 | INFO     | sum of deviations: 11595618725.789263
[2025-10-12 11:58:30] 2025-10-12 15:57:49,453 | INFO     | mean x: 1760276714.697318
[2025-10-12 11:58:30] 2025-10-12 15:57:49,454 | INFO     | mean y: 2471220.9846743294
[2025-10-12 11:58:30] 2025-10-12 15:57:49,454 | INFO     | -- intersect: -3700168912.2596583
[2025-10-12 11:58:30] 2025-10-12 15:57:49,454 | INFO     | intersect: -3700168912.2596583
[2025-10-12 11:58:30] 2025-10-12 15:57:49,454 | INFO     | chi2: 4.381068490695289
[2025-10-12 11:58:30] 2025-10-12 15:57:49,454 | INFO     | current chi2=4.381068490695289 (change=51.015897890737214 %)
[2025-10-12 11:58:30] 2025-10-12 15:57:49,454 | INFO     | sum of square deviations: 5201752826.859375
[2025-10-12 11:58:30] 2025-10-12 15:57:49,456 | INFO     | sum of deviations: -51206672366.328125
[2025-10-12 11:58:30] 2025-10-12 15:57:49,456 | INFO     | mean x: 1760276867.2265625
[2025-10-12 11:58:30] 2025-10-12 15:57:49,456 | INFO     | mean y: 2501989.1953125
[2025-10-12 11:58:30] 2025-10-12 15:57:49,456 | INFO     | -- intersect: 17330876445.71846
[2025-10-12 11:58:30] 2025-10-12 15:57:49,456 | INFO     | intersect: 17330876445.71846
[2025-10-12 11:58:30] 2025-10-12 15:57:49,456 | INFO     | chi2: 2.187400537567721
[2025-10-12 11:58:30] 2025-10-12 15:57:49,456 | INFO     | current chi2=2.187400537567721 (change=50.0715283905417 %)
[2025-10-12 11:58:30] 2025-10-12 15:57:49,456 | INFO     | sum of square deviations: 4902741186.685219
[2025-10-12 11:58:30] 2025-10-12 15:57:49,458 | INFO     | sum of deviations: -68811629935.50995
[2025-10-12 11:58:30] 2025-10-12 15:57:49,458 | INFO     | mean x: 1760277019.752988
[2025-10-12 11:58:30] 2025-10-12 15:57:49,458 | INFO     | mean y: 2510915.346613546
[2025-10-12 11:58:30] 2025-10-12 15:57:49,458 | INFO     | -- intersect: 24708593952.358856
[2025-10-12 11:58:30] 2025-10-12 15:57:49,458 | INFO     | intersect: 24708593952.358856
[2025-10-12 11:58:30] 2025-10-12 15:57:49,458 | INFO     | chi2: 1.917334088137048
[2025-10-12 11:58:30] 2025-10-12 15:57:49,458 | INFO     | current chi2=1.917334088137048 (change=12.34645620646016 %)
[2025-10-12 11:58:30] 2025-10-12 15:57:49,458 | INFO     | left removable region: 30
[2025-10-12 11:58:30] 2025-10-12 15:57:49,458 | INFO     | sum of square deviations: 3772237578.1912985
[2025-10-12 11:58:30] 2025-10-12 15:57:49,459 | INFO     | sum of deviations: -21397504695.60871
[2025-10-12 11:58:30] 2025-10-12 15:57:49,460 | INFO     | mean x: 1760277294.278261
[2025-10-12 11:58:30] 2025-10-12 15:57:49,460 | INFO     | mean y: 2519976.4782608696
[2025-10-12 11:58:30] 2025-10-12 15:57:49,460 | INFO     | -- intersect: 9987453557.45177
[2025-10-12 11:58:30] 2025-10-12 15:57:49,460 | INFO     | intersect: 9987453557.45177
[2025-10-12 11:58:30] 2025-10-12 15:57:49,460 | INFO     | chi2: 0.29687292108084107
[2025-10-12 11:58:30] 2025-10-12 15:57:49,460 | INFO     | -- intersect: 9987453557.45177
[2025-10-12 11:58:30] 2025-10-12 15:57:49,460 | INFO     | current memory leak: -5.67 B/s (using 230 data points, chi2=0.30)
[2025-10-12 11:58:30] 2025-10-12 15:57:49,461 | INFO     | could have reported an average CPU frequency of 3267 MHz (12 samples)
[2025-10-12 11:58:30] 2025-10-12 15:57:49,461 | INFO     | ..............................
[2025-10-12 11:58:30] 2025-10-12 15:57:49,461 | INFO     | . Timing measurements:
[2025-10-12 11:58:30] 2025-10-12 15:57:49,461 | INFO     | . get job = 0 s
[2025-10-12 11:58:30] 2025-10-12 15:57:49,461 | INFO     | . initial setup = 8 s
[2025-10-12 11:58:30] 2025-10-12 15:57:49,461 | INFO     | . payload setup = 59 s
[2025-10-12 11:58:30] 2025-10-12 15:57:49,461 | INFO     | . stage-in = 0 s
[2025-10-12 11:58:30] 2025-10-12 15:57:49,461 | INFO     | . payload execution = 16229 s
[2025-10-12 11:58:30] 2025-10-12 15:57:49,461 | INFO     | . stage-out = 2 s
[2025-10-12 11:58:30] 2025-10-12 15:57:49,461 | INFO     | . log creation = 0 s
[2025-10-12 11:58:30] 2025-10-12 15:57:49,461 | INFO     | ..............................
[2025-10-12 11:58:30] 2025-10-12 15:57:49,532 | INFO     | 
[2025-10-12 11:58:30] 2025-10-12 15:57:49,533 | INFO     | job summary report
[2025-10-12 11:58:30] 2025-10-12 15:57:49,533 | INFO     | --------------------------------------------------
[2025-10-12 11:58:30] 2025-10-12 15:57:49,533 | INFO     | PanDA job id: 6839387551
[2025-10-12 11:58:30] 2025-10-12 15:57:49,533 | INFO     | task id: 46676269
[2025-10-12 11:58:30] 2025-10-12 15:57:49,533 | INFO     | errors: (none)
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | pilot state: finished 
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | transexitcode: 0
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | exeerrorcode: 0
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | exeerrordiag: 
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | exitcode: 0
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | exitmsg: OK
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | cpuconsumptiontime: 36646 s
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | nevents: 400
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | neventsw: 0
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | pid: 3004860
[2025-10-12 11:58:30] 2025-10-12 15:57:49,535 | INFO     | pgrp: 3004860
[2025-10-12 11:58:30] 2025-10-12 15:57:49,536 | INFO     | corecount: 8
[2025-10-12 11:58:30] 2025-10-12 15:57:49,536 | INFO     | event service: False
[2025-10-12 11:58:30] 2025-10-12 15:57:49,539 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 33: 2348941, 35: 2349259, 44: 2349415, 16291: 2381386, 16295: 2390440, 16304: 2390578}
[2025-10-12 11:58:30] 2025-10-12 15:57:49,540 | INFO     | --------------------------------------------------
[2025-10-12 11:58:30] 2025-10-12 15:57:49,540 | INFO     | 
[2025-10-12 11:58:30] 2025-10-12 15:57:49,540 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 11:58:30] 2025-10-12 15:57:49,582 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:58:30] 2025-10-12 15:57:49,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:58:30] 2025-10-12 15:57:49,584 | INFO     | job 6839387551 has completed (purged errors)
[2025-10-12 11:58:30] 2025-10-12 15:57:49,584 | INFO     | overall cleanup function is called
[2025-10-12 11:58:30] 2025-10-12 15:57:50,592 | INFO     | --- collectZombieJob: --- 10, [3004860]
[2025-10-12 11:58:30] 2025-10-12 15:57:50,595 | INFO     | zombie collector waiting for pid 3004860
[2025-10-12 11:58:30] 2025-10-12 15:57:50,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:58:30] 2025-10-12 15:57:50,596 | INFO     | collected zombie processes
[2025-10-12 11:58:30] 2025-10-12 15:57:50,596 | INFO     | will attempt to kill all subprocesses of pid=3004860
[2025-10-12 11:58:30] 2025-10-12 15:57:50,854 | INFO     | process IDs to be killed: [3004860] (in reverse order)
[2025-10-12 11:58:30] 2025-10-12 15:57:50,965 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:58:30] 2025-10-12 15:57:50,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:58:30] 2025-10-12 15:57:50,980 | INFO     | did not find any defunct processes belonging to 3004860
[2025-10-12 11:58:30] 2025-10-12 15:57:50,993 | INFO     | did not find any defunct processes belonging to 3004860
[2025-10-12 11:58:30] 2025-10-12 15:57:50,994 | INFO     | ready for new job
[2025-10-12 11:58:30] 2025-10-12 15:57:50,994 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:58:30] 2025-10-12 15:57:50,996 | INFO     | ***************************************
[2025-10-12 11:58:30] 2025-10-12 15:57:50,996 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:58:30] 2025-10-12 15:57:50,997 | INFO     | ***************************************
[2025-10-12 11:58:30] 2025-10-12 15:57:50,997 | INFO     | 
[2025-10-12 11:58:30] 2025-10-12 15:57:51,000 | INFO     | architecture information:
[2025-10-12 11:58:30] 2025-10-12 15:57:51,004 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:58:30] 2025-10-12 15:57:51,027 | INFO     | cat /etc/os-release:
[2025-10-12 11:58:30] NAME="CentOS Linux"
[2025-10-12 11:58:30] VERSION="7 (Core)"
[2025-10-12 11:58:30] ID="centos"
[2025-10-12 11:58:30] ID_LIKE="rhel fedora"
[2025-10-12 11:58:30] VERSION_ID="7"
[2025-10-12 11:58:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:58:30] ANSI_COLOR="0;31"
[2025-10-12 11:58:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:58:30] HOME_URL="https://www.centos.org/"
[2025-10-12 11:58:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:58:30] 
[2025-10-12 11:58:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:58:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:58:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:58:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:58:30] 
[2025-10-12 11:58:30] 2025-10-12 15:57:51,027 | INFO     | ***************************************
[2025-10-12 11:58:30] 2025-10-12 15:57:51,530 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 11:58:30] 2025-10-12 15:57:51,605 | INFO     | sufficient remaining disk space (85146468352 B)
[2025-10-12 11:58:30] 2025-10-12 15:57:51,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:58:30] 2025-10-12 15:57:51,606 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:58:30] 2025-10-12 15:57:51,606 | INFO     | update_server=False
[2025-10-12 11:58:30] 2025-10-12 15:57:51,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:58:30] 2025-10-12 15:57:51,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:58:30] 2025-10-12 15:57:51,606 | INFO     | aborting loop
[2025-10-12 11:58:30] 2025-10-12 15:57:51,625 | INFO     | all payload control threads have been joined
[2025-10-12 11:58:30] 2025-10-12 15:57:52,385 | INFO     | all data control threads have been joined
[2025-10-12 11:58:30] 2025-10-12 15:57:52,611 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:52,611 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:52,630 | INFO     | [payload] control thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:52,700 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:52,705 | INFO     | [job] validate thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:52,844 | INFO     | all job control threads have been joined
[2025-10-12 11:58:30] 2025-10-12 15:57:52,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:58:30] 2025-10-12 15:57:53,024 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:53,392 | INFO     | [data] control thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:53,444 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:53,453 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:53,850 | INFO     | [job] control thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:53,876 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:54,007 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:54,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:58:30] 2025-10-12 15:57:54,977 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:55,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:58:30] 2025-10-12 15:57:55,600 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:57:59,086 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:58:01,946 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:58:30] 2025-10-12 15:58:02,952 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:58:30] 2025-10-12 15:58:22,675 | INFO     | PID=2998017 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:58:30] 2025-10-12 15:58:22,675 | INFO     | .. there are 11 such processes running
[2025-10-12 11:58:30] 2025-10-12 15:58:22,675 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:58:30] 2025-10-12 15:58:22,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:58:30] 2025-10-12 15:58:22,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:58:30] 2025-10-12 15:58:23,837 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:58:30] 2025-10-12 15:58:24,718 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652746671936)>', '<ExcThread(monitor, started 140651438003968)>']
[2025-10-12 11:58:30] 2025-10-12 15:58:25,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:58:30] 2025-10-12 15:58:25,711 | INFO     | [monitor] control thread has ended
[2025-10-12 11:58:30] 2025-10-12 15:58:29,744 | INFO     | all workflow threads have been joined
[2025-10-12 11:58:30] 2025-10-12 15:58:29,745 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:58:30] 2025-10-12 15:58:29,745 | INFO     | traces error code: 0
[2025-10-12 11:58:30] 2025-10-12 15:58:29,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:58:30] 2025-10-12 15:58:30,223 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:58:30] 2025-10-12 15:58:30,272 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:58:30] 2025-10-12 15:58:30,323 [wrapper] pilotpid: 2998017
[2025-10-12 11:58:30] 2025-10-12 15:58:30,326 [wrapper] Pilot exit status: 0
[2025-10-12 11:58:30] 2025-10-12 15:58:30,415 [wrapper] pandaids: 6839387551
[2025-10-12 11:58:30] 2025-10-12 15:58:30,518 [wrapper] cleanup supervisor_pilot 3425732 2998018
[2025-10-12 11:58:30] 2025-10-12 15:58:30,522 [wrapper] Test setup, not cleaning
[2025-10-12 11:58:30] 2025-10-12 15:58:30,526 [wrapper] apfmon messages muted
[2025-10-12 11:58:30] 2025-10-12 15:58:30,529 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:58:30] 2025-10-12 15:58:30,532 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:58:30]  *** Error codes and diagnostics ***
[2025-10-12 11:58:30]     "exeErrorCode": 0,
[2025-10-12 11:58:30]     "exeErrorDiag": "",
[2025-10-12 11:58:30]     "pilotErrorCode": 0,
[2025-10-12 11:58:30]     "pilotErrorDiag": "",
[2025-10-12 11:58:30]  *** Listing of results directory ***
[2025-10-12 11:58:30] total 422748
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 00:52 queuedata.json
[2025-10-12 11:58:30] -rwx------. 1 boincer umatlas     36292 Oct 12 00:53 runpilot2-wrapper.sh
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas       100 Oct 12 07:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:58:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 07:23 run_atlas
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas       105 Oct 12 07:23 job.xml
[2025-10-12 11:58:30] -rw-r--r--. 2 boincer umatlas 220367285 Oct 12 07:23 EVNT.46676267._004305.pool.root.1
[2025-10-12 11:58:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 07:23 shared
[2025-10-12 11:58:30] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 07:23 input.tar.gz
[2025-10-12 11:58:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:23 start_atlas.sh
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas         0 Oct 12 07:23 boinc_lockfile
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 07:23 pandaJob.out
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas    975520 Oct 12 07:24 agis_schedconf.cvmfs.json
[2025-10-12 11:58:30] drwx------. 5 boincer umatlas      4096 Oct 12 07:24 pilot3
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas      6900 Oct 12 11:55 init_data.xml
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas 203169479 Oct 12 11:56 HITS.46676269._071442.pool.root.1
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas       531 Oct 12 11:56 boinc_task_state.xml
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas        95 Oct 12 11:57 pilot_heartbeat.json
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas      1045 Oct 12 11:57 memory_monitor_summary.json
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas   1560580 Oct 12 11:57 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas    498174 Oct 12 11:57 log.46676269._071442.job.log.tgz.1
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas      7792 Oct 12 11:57 heartbeat.json
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:58 boinc_mmap_file
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas        28 Oct 12 11:58 wrapper_checkpoint.txt
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas      4896 Oct 12 11:58 pilotlog.txt
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas   2230638 Oct 12 11:58 log.46676269._071442.job.log.1
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas       357 Oct 12 11:58 output.list
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:58 runtime_log
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas   2744320 Oct 12 11:58 result.tar.gz
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas       659 Oct 12 11:58 xd5KDm5F3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEfiNDmjLuJ7n.diag
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 11:58 runtime_log.err
[2025-10-12 11:58:30] -rw-r--r--. 1 boincer umatlas     20994 Oct 12 11:58 stderr.txt
[2025-10-12 11:58:30] HITS file was successfully produced:
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas 203169479 Oct 12 11:56 shared/HITS.pool.root.1
[2025-10-12 11:58:30]  *** Contents of shared directory: ***
[2025-10-12 11:58:30] total 416876
[2025-10-12 11:58:30] -rw-r--r--. 2 boincer umatlas 220367285 Oct 12 07:23 ATLAS.root_0
[2025-10-12 11:58:30] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 07:23 input.tar.gz
[2025-10-12 11:58:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:23 start_atlas.sh
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas 203169479 Oct 12 11:56 HITS.pool.root.1
[2025-10-12 11:58:30] -rw-------. 1 boincer umatlas   2744320 Oct 12 11:58 result.tar.gz
11:58:32 (2994190): run_atlas exited; CPU time 36687.239955
11:58:32 (2994190): called boinc_finish(0)

</stderr_txt>
]]>

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