Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:19:07 (3114882): wrapper (7.7.26015): starting
19:19:07 (3114882): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:19:07] Arguments: --nthreads 8
[2025-10-12 19:19:07] Threads: 8
[2025-10-12 19:19:07] Checking for CVMFS
[2025-10-12 19:19:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:19:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:19:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:19:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:19:07] 2.13.2.0 1338992 4721 59384 151629 1 56 3166442 4097024 0 130560 0 4876129 99.993 162637 26957 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 19:19:07] CVMFS is ok
[2025-10-12 19:19:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:19:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:19:07] Further information can be found at the LHC@home message board.
[2025-10-12 19:19:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:19:07] Checking for apptainer binary...
[2025-10-12 19:19:07] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 19:19:07] apptainer is not installed, using version from CVMFS
[2025-10-12 19:19:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:19:07] pckeatlas02
[2025-10-12 19:19:07] apptainer works
[2025-10-12 19:19:07] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:19:07] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:19:07] Starting ATLAS job with PandaID=6839474182
[2025-10-12 19:19:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:37:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:37:46]  status_code=0
[2025-10-12 20:37:46]  storage_token=
[2025-10-12 20:37:46]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6839474182/log.46676269._071548.job.log.tgz.1
[2025-10-12 20:37:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/47/log.46676269._071548.job.log.tgz.1
[2025-10-12 20:37:46]  workdir=None
[2025-10-12 20:37:46] ]
[2025-10-12 20:37:46] 2025-10-12 18:37:12,098 | INFO     | transferring file log.46676269._071548.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6839474182/log.46676269._071548.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 20:37:46] 2025-10-12 18:37:12,098 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6839474182/log.46676269._071548.job.log.tgz.1 /var/lib/boinc/slots/19/log.46676269._071548.j
[2025-10-12 20:37:46] 2025-10-12 18:37:12,105 | INFO     | adding to output.list: log.46676269._071548.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/47/log.46676269._071548.job.log.tg
[2025-10-12 20:37:46] 2025-10-12 18:37:12,105 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 20:37:46] 2025-10-12 18:37:12,105 | INFO     | summary of transferred files:
[2025-10-12 20:37:46] 2025-10-12 18:37:12,105 | INFO     |  -- lfn=log.46676269._071548.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 20:37:46] 2025-10-12 18:37:12,105 | INFO     | stage-out finished correctly
[2025-10-12 20:37:46] 2025-10-12 18:37:12,141 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 20:37:46] 2025-10-12 18:37:12,175 | INFO     | job 6839474182 has state=finished
[2025-10-12 20:37:46] 2025-10-12 18:37:12,175 | INFO     | preparing for final server update for job 6839474182 in state='finished'
[2025-10-12 20:37:46] 2025-10-12 18:37:12,175 | INFO     | this job has now completed (state=finished)
[2025-10-12 20:37:46] 2025-10-12 18:37:12,175 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 20:37:46] 2025-10-12 18:37:12,175 | INFO     | log transfer has been attempted: DONE
[2025-10-12 20:37:46] 2025-10-12 18:37:12,176 | INFO     | job 6839474182 has finished - writing final server update
[2025-10-12 20:37:46] 2025-10-12 18:37:12,176 | INFO     | total number of processed events: 400 (read)
[2025-10-12 20:37:46] 2025-10-12 18:37:12,176 | INFO     | executing command: lscpu
[2025-10-12 20:37:46] 2025-10-12 18:37:12,185 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 20:37:46] 2025-10-12 18:37:13,016 | INFO     | time since job start (4682s) is within the limit (172800.0s)
[2025-10-12 20:37:46] 2025-10-12 18:37:14,798 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 20:37:46] 2025-10-12 18:37:14,799 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3814.11225
[2025-10-12 20:37:46] 2025-10-12 18:37:14,799 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6839474182/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:37:46] 2025-10-12 18:37:14,800 | INFO     | extracted standard info from prmon json
[2025-10-12 20:37:46] 2025-10-12 18:37:14,800 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:37:46] 2025-10-12 18:37:14,800 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:37:46] 2025-10-12 18:37:14,800 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:37:46] 2025-10-12 18:37:14,800 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:37:46] 2025-10-12 18:37:14,801 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:37:46] 2025-10-12 18:37:14,801 | INFO     | sum of square deviations: 106336877.5
[2025-10-12 20:37:46] 2025-10-12 18:37:14,801 | INFO     | sum of deviations: -11949415080.5
[2025-10-12 20:37:46] 2025-10-12 18:37:14,801 | INFO     | mean x: 1760291979.5
[2025-10-12 20:37:46] 2025-10-12 18:37:14,801 | INFO     | mean y: 2680867.5285714287
[2025-10-12 20:37:46] 2025-10-12 18:37:14,801 | INFO     | -- intersect: 197812321515.67056
[2025-10-12 20:37:46] 2025-10-12 18:37:14,801 | INFO     | intersect: 197812321515.67056
[2025-10-12 20:37:46] 2025-10-12 18:37:14,801 | INFO     | chi2: 0.1327273623429823
[2025-10-12 20:37:46] 2025-10-12 18:37:14,801 | INFO     | -- intersect: 197812321515.67056
[2025-10-12 20:37:46] 2025-10-12 18:37:14,801 | INFO     | current memory leak: -112.37 B/s (using 70 data points, chi2=0.13)
[2025-10-12 20:37:46] 2025-10-12 18:37:14,802 | INFO     | could have reported an average CPU frequency of 3755 MHz (6 samples)
[2025-10-12 20:37:46] 2025-10-12 18:37:14,802 | INFO     | ..............................
[2025-10-12 20:37:46] 2025-10-12 18:37:14,802 | INFO     | . Timing measurements:
[2025-10-12 20:37:46] 2025-10-12 18:37:14,802 | INFO     | . get job = 0 s
[2025-10-12 20:37:46] 2025-10-12 18:37:14,802 | INFO     | . initial setup = 0 s
[2025-10-12 20:37:46] 2025-10-12 18:37:14,802 | INFO     | . payload setup = 3 s
[2025-10-12 20:37:46] 2025-10-12 18:37:14,802 | INFO     | . stage-in = 0 s
[2025-10-12 20:37:46] 2025-10-12 18:37:14,802 | INFO     | . payload execution = 4660 s
[2025-10-12 20:37:46] 2025-10-12 18:37:14,802 | INFO     | . stage-out = 0 s
[2025-10-12 20:37:46] 2025-10-12 18:37:14,802 | INFO     | . log creation = 0 s
[2025-10-12 20:37:46] 2025-10-12 18:37:14,802 | INFO     | ..............................
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | 
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | job summary report
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | --------------------------------------------------
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | PanDA job id: 6839474182
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | task id: 46676269
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | errors: (none)
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | pilot state: finished 
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | transexitcode: 0
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | exeerrorcode: 0
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | exeerrordiag: 
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | exitcode: 0
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | exitmsg: OK
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | cpuconsumptiontime: 34740 s
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | nevents: 400
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | neventsw: 0
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | pid: 3125922
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | pgrp: 3125922
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | corecount: 8
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | event service: False
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | sizes: {0: 2348631, 1: 2348830, 2: 2349092, 11: 2349120, 4667: 2375375, 4668: 2384559, 4670: 2384697}
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | --------------------------------------------------
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | 
[2025-10-12 20:37:46] 2025-10-12 18:37:14,839 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,849 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:37:46] 2025-10-12 18:37:14,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,849 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:37:46] 2025-10-12 18:37:14,849 | INFO     | job 6839474182 has completed (purged errors)
[2025-10-12 20:37:46] 2025-10-12 18:37:14,849 | INFO     | overall cleanup function is called
[2025-10-12 20:37:46] 2025-10-12 18:37:15,855 | INFO     | --- collectZombieJob: --- 10, [3125922]
[2025-10-12 20:37:46] 2025-10-12 18:37:15,855 | INFO     | zombie collector waiting for pid 3125922
[2025-10-12 20:37:46] 2025-10-12 18:37:15,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:37:46] 2025-10-12 18:37:15,855 | INFO     | collected zombie processes
[2025-10-12 20:37:46] 2025-10-12 18:37:15,855 | INFO     | will attempt to kill all subprocesses of pid=3125922
[2025-10-12 20:37:46] 2025-10-12 18:37:15,887 | INFO     | process IDs to be killed: [3125922] (in reverse order)
[2025-10-12 20:37:46] 2025-10-12 18:37:15,902 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:37:46] 2025-10-12 18:37:15,903 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:37:46] 2025-10-12 18:37:15,903 | INFO     | did not find any defunct processes belonging to 3125922
[2025-10-12 20:37:46] 2025-10-12 18:37:15,904 | INFO     | did not find any defunct processes belonging to 3125922
[2025-10-12 20:37:46] 2025-10-12 18:37:15,904 | INFO     | ready for new job
[2025-10-12 20:37:46] 2025-10-12 18:37:15,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:37:46] 2025-10-12 18:37:15,905 | INFO     | ***************************************
[2025-10-12 20:37:46] 2025-10-12 18:37:15,905 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:37:46] 2025-10-12 18:37:15,905 | INFO     | ***************************************
[2025-10-12 20:37:46] 2025-10-12 18:37:15,905 | INFO     | 
[2025-10-12 20:37:46] 2025-10-12 18:37:15,906 | INFO     | architecture information:
[2025-10-12 20:37:46] 2025-10-12 18:37:15,906 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:37:46] 2025-10-12 18:37:15,911 | INFO     | cat /etc/os-release:
[2025-10-12 20:37:46] NAME="CentOS Linux"
[2025-10-12 20:37:46] VERSION="7 (Core)"
[2025-10-12 20:37:46] ID="centos"
[2025-10-12 20:37:46] ID_LIKE="rhel fedora"
[2025-10-12 20:37:46] VERSION_ID="7"
[2025-10-12 20:37:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:37:46] ANSI_COLOR="0;31"
[2025-10-12 20:37:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:37:46] HOME_URL="https://www.centos.org/"
[2025-10-12 20:37:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:37:46] 
[2025-10-12 20:37:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:37:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:37:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:37:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:37:46] 
[2025-10-12 20:37:46] 2025-10-12 18:37:15,911 | INFO     | ***************************************
[2025-10-12 20:37:46] 2025-10-12 18:37:16,414 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-12 20:37:46] 2025-10-12 18:37:16,421 | INFO     | sufficient remaining disk space (118222749696 B)
[2025-10-12 20:37:46] 2025-10-12 18:37:16,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:37:46] 2025-10-12 18:37:16,421 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:37:46] 2025-10-12 18:37:16,421 | INFO     | update_server=False
[2025-10-12 20:37:46] 2025-10-12 18:37:16,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:37:46] 2025-10-12 18:37:16,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:37:46] 2025-10-12 18:37:16,563 | INFO     | all data control threads have been joined
[2025-10-12 20:37:46] 2025-10-12 18:37:17,029 | INFO     | all job control threads have been joined
[2025-10-12 20:37:46] 2025-10-12 18:37:17,425 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:17,426 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:17,476 | INFO     | all payload control threads have been joined
[2025-10-12 20:37:46] 2025-10-12 18:37:17,507 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:17,569 | INFO     | [data] control thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:17,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:37:46] 2025-10-12 18:37:17,724 | WARNING  | process 3125922 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 20:37:46] 2025-10-12 18:37:17,749 | INFO     | using path: /var/lib/boinc/slots/19/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:37:46] 2025-10-12 18:37:17,749 | INFO     | using path: /var/lib/boinc/slots/19/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:37:46] 2025-10-12 18:37:17,749 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-12 20:37:46] 2025-10-12 18:37:17,749 | WARNING  | maxPSS not found in memory monitor output
[2025-10-12 20:37:46] 2025-10-12 18:37:17,750 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/19/PanDA_Pilot-6839474182/payload.stdout) since it has not been created yet
[2025-10-12 20:37:46] 2025-10-12 18:37:17,750 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-12 20:37:46] 2025-10-12 18:37:17,756 | INFO     | sufficient remaining disk space (118223798272 B)
[2025-10-12 20:37:46] 2025-10-12 18:37:17,757 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-10-12 20:37:46] 2025-10-12 18:37:17,757 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/19/PanDA_Pilot-6839474182/HITS.46676269._071548.pool.root.1 since it does not exist
[2025-10-12 20:37:46] 2025-10-12 18:37:17,789 | INFO     | number of running child processes to parent process 3125922: 1
[2025-10-12 20:37:46] 2025-10-12 18:37:17,789 | INFO     | maximum number of monitored processes: 6
[2025-10-12 20:37:46] 2025-10-12 18:37:17,789 | INFO     | aborting job monitoring since job object (job id=6839474182) has expired
[2025-10-12 20:37:46] 2025-10-12 18:37:17,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:37:46] 2025-10-12 18:37:17,789 | INFO     | will abort loop
[2025-10-12 20:37:46] 2025-10-12 18:37:18,023 | INFO     | [job] validate thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:18,035 | INFO     | [job] control thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:18,063 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:18,114 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:18,167 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:18,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:37:46] 2025-10-12 18:37:18,481 | INFO     | [payload] control thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:18,578 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:18,682 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:18,794 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:18,825 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:37:46] 2025-10-12 18:37:18,927 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:19,655 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:22,186 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:37:46] 2025-10-12 18:37:23,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648820991808)>', '<ExcThread(monitor, started 139648269526784)>']
[2025-10-12 20:37:46] 2025-10-12 18:37:28,413 | INFO     | all workflow threads have been joined
[2025-10-12 20:37:46] 2025-10-12 18:37:28,413 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:37:46] 2025-10-12 18:37:28,413 | INFO     | traces error code: 0
[2025-10-12 20:37:46] 2025-10-12 18:37:28,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:37:46] 2025-10-12 18:37:46,146 | INFO     | PID=3118622 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:37:46] 2025-10-12 18:37:46,147 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:37:46] 2025-10-12 18:37:46,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:37:46] 2025-10-12 18:37:46,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:37:46] 2025-10-12 18:37:46,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:37:46] 2025-10-12 18:37:46,147 | INFO     | [monitor] control thread has ended
[2025-10-12 20:37:46] 2025-10-12 18:37:46,204 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:37:46] 2025-10-12 18:37:46,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:37:46] 2025-10-12 18:37:46,206 [wrapper] pilotpid: 3118622
[2025-10-12 20:37:46] 2025-10-12 18:37:46,207 [wrapper] Pilot exit status: 0
[2025-10-12 20:37:46] 2025-10-12 18:37:46,211 [wrapper] pandaids: 6839474182
[2025-10-12 20:37:46] 2025-10-12 18:37:46,220 [wrapper] cleanup supervisor_pilot 3142489 3118623
[2025-10-12 20:37:46] 2025-10-12 18:37:46,221 [wrapper] Test setup, not cleaning
[2025-10-12 20:37:46] 2025-10-12 18:37:46,222 [wrapper] apfmon messages muted
[2025-10-12 20:37:46] 2025-10-12 18:37:46,223 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:37:46] 2025-10-12 18:37:46,224 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:37:46]  *** Error codes and diagnostics ***
[2025-10-12 20:37:46]     "exeErrorCode": 0,
[2025-10-12 20:37:46]     "exeErrorDiag": "",
[2025-10-12 20:37:46]     "pilotErrorCode": 0,
[2025-10-12 20:37:46]     "pilotErrorDiag": "",
[2025-10-12 20:37:46]  *** Listing of results directory ***
[2025-10-12 20:37:46] total 408200
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:38 pilot3.tar.gz
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc      5112 Oct 12 07:03 queuedata.json
[2025-10-12 20:37:46] -rwx------. 1 boinc boinc     36292 Oct 12 07:04 runpilot2-wrapper.sh
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc       100 Oct 12 19:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:37:46] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 19:19 run_atlas
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc       105 Oct 12 19:19 job.xml
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc      6275 Oct 12 19:19 init_data.xml
[2025-10-12 20:37:46] -rw-r--r--. 2 boinc boinc 219016397 Oct 12 19:19 EVNT.46676267._001156.pool.root.1
[2025-10-12 20:37:46] -rw-r--r--. 2 boinc boinc     15120 Oct 12 19:19 start_atlas.sh
[2025-10-12 20:37:46] drwxrwx--x. 2 boinc boinc        68 Oct 12 19:19 shared
[2025-10-12 20:37:46] -rw-r--r--. 2 boinc boinc    569682 Oct 12 19:19 input.tar.gz
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc         0 Oct 12 19:19 boinc_lockfile
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc      2547 Oct 12 19:19 pandaJob.out
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc    975528 Oct 12 19:19 agis_schedconf.cvmfs.json
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc   1560580 Oct 12 19:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:37:46] drwx------. 5 boinc boinc      4096 Oct 12 19:19 pilot3
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc 193101011 Oct 12 20:36 HITS.46676269._071548.pool.root.1
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc      1013 Oct 12 20:37 memory_monitor_summary.json
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc    308242 Oct 12 20:37 log.46676269._071548.job.log.tgz.1
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc       529 Oct 12 20:37 boinc_task_state.xml
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc      7773 Oct 12 20:37 heartbeat.json
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc        27 Oct 12 20:37 wrapper_checkpoint.txt
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc      8192 Oct 12 20:37 boinc_mmap_file
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc       747 Oct 12 20:37 pilotlog.txt
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc        95 Oct 12 20:37 pilot_heartbeat.json
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc    689053 Oct 12 20:37 log.46676269._071548.job.log.1
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc       357 Oct 12 20:37 output.list
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc       620 Oct 12 20:37 runtime_log
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc   1013760 Oct 12 20:37 result.tar.gz
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc      8730 Oct 12 20:37 runtime_log.err
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc       650 Oct 12 20:37 dMCODm0Q3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNgiNDmzmoYNm.diag
[2025-10-12 20:37:46] -rw-r--r--. 1 boinc boinc     22363 Oct 12 20:37 stderr.txt
[2025-10-12 20:37:46] HITS file was successfully produced:
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc 193101011 Oct 12 20:36 shared/HITS.pool.root.1
[2025-10-12 20:37:46]  *** Contents of shared directory: ***
[2025-10-12 20:37:46] total 404028
[2025-10-12 20:37:46] -rw-r--r--. 2 boinc boinc 219016397 Oct 12 19:19 ATLAS.root_0
[2025-10-12 20:37:46] -rw-r--r--. 2 boinc boinc     15120 Oct 12 19:19 start_atlas.sh
[2025-10-12 20:37:46] -rw-r--r--. 2 boinc boinc    569682 Oct 12 19:19 input.tar.gz
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc 193101011 Oct 12 20:36 HITS.pool.root.1
[2025-10-12 20:37:46] -rw-------. 1 boinc boinc   1013760 Oct 12 20:37 result.tar.gz
20:37:47 (3114882): run_atlas exited; CPU time 34775.846504
20:37:47 (3114882): called boinc_finish(0)

</stderr_txt>
]]>

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