Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:39:31 (2123893): wrapper (7.7.26015): starting
06:39:31 (2123893): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 06:39:31] Arguments: --nthreads 9
[2025-10-12 06:39:31] Threads: 9
[2025-10-12 06:39:31] Checking for CVMFS
[2025-10-12 06:39:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:39:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:39:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:39:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:39:34] 2.13.2.0 2531586 129152 813060 151617 1 582 25756283 32935936 57040 16776704 0 185994601 99.739 124643027 23423 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 06:39:34] CVMFS is ok
[2025-10-12 06:39:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:39:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:39:34] Further information can be found at the LHC@home message board.
[2025-10-12 06:39:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:39:34] Checking for apptainer binary...
[2025-10-12 06:39:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:39:34] Running /usr/bin/apptainer --version
[2025-10-12 06:39:34] apptainer version 1.4.3-1.el9
[2025-10-12 06:39:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:39:35] c-1-3.aglt2.org
[2025-10-12 06:39:35] apptainer works
[2025-10-12 06:39:35] Set ATHENA_PROC_NUMBER=9
[2025-10-12 06:39:35] Set ATHENA_CORE_NUMBER=9
[2025-10-12 06:39:35] Starting ATLAS job with PandaID=6839474259
[2025-10-12 06:39:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:44:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:44:32] 2025-10-12 15:43:37,265 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:44:32] 2025-10-12 15:43:37,294 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:44:32] 2025-10-12 15:43:37,327 | INFO     | sum of square deviations: 7960311088.081358
[2025-10-12 11:44:32] 2025-10-12 15:43:37,329 | INFO     | sum of deviations: 96516095077.52878
[2025-10-12 11:44:32] 2025-10-12 15:43:37,329 | INFO     | mean x: 1760274790.2847457
[2025-10-12 11:44:32] 2025-10-12 15:43:37,329 | INFO     | mean y: 2126166.8508474575
[2025-10-12 11:44:32] 2025-10-12 15:43:37,329 | INFO     | -- intersect: -21340613726.326946
[2025-10-12 11:44:32] 2025-10-12 15:43:37,329 | INFO     | intersect: -21340613726.326946
[2025-10-12 11:44:32] 2025-10-12 15:43:37,330 | INFO     | chi2: 3.804353016390763
[2025-10-12 11:44:32] 2025-10-12 15:43:37,330 | INFO     | sum of square deviations: 7562385060.168925
[2025-10-12 11:44:32] 2025-10-12 15:43:37,358 | INFO     | sum of deviations: 111694842857.14821
[2025-10-12 11:44:32] 2025-10-12 15:43:37,358 | INFO     | mean x: 1760274637.7896552
[2025-10-12 11:44:32] 2025-10-12 15:43:37,359 | INFO     | mean y: 2131891.1827586205
[2025-10-12 11:44:32] 2025-10-12 15:43:37,359 | INFO     | -- intersect: -25996755693.754253
[2025-10-12 11:44:32] 2025-10-12 15:43:37,359 | INFO     | intersect: -25996755693.754253
[2025-10-12 11:44:32] 2025-10-12 15:43:37,359 | INFO     | chi2: 3.0366857748513634
[2025-10-12 11:44:32] 2025-10-12 15:43:37,359 | INFO     | current chi2=3.0366857748513634 (change=20.178654247698994 %)
[2025-10-12 11:44:32] 2025-10-12 15:43:37,360 | INFO     | right removable region: 289
[2025-10-12 11:44:32] 2025-10-12 15:43:37,390 | INFO     | sum of square deviations: 7562333820.168925
[2025-10-12 11:44:32] 2025-10-12 15:43:37,392 | INFO     | sum of deviations: 35184682999.744774
[2025-10-12 11:44:32] 2025-10-12 15:43:37,422 | INFO     | mean x: 1760274942.7896552
[2025-10-12 11:44:32] 2025-10-12 15:43:37,422 | INFO     | mean y: 2149595.848275862
[2025-10-12 11:44:32] 2025-10-12 15:43:37,422 | INFO     | -- intersect: -8187744863.619583
[2025-10-12 11:44:32] 2025-10-12 15:43:37,422 | INFO     | intersect: -8187744863.619583
[2025-10-12 11:44:32] 2025-10-12 15:43:37,423 | INFO     | chi2: 1.4707332119861545
[2025-10-12 11:44:32] 2025-10-12 15:43:37,423 | INFO     | current chi2=1.4707332119861545 (change=61.34077974232114 %)
[2025-10-12 11:44:32] 2025-10-12 15:43:37,423 | INFO     | sum of square deviations: 7177863110.828039
[2025-10-12 11:44:32] 2025-10-12 15:43:37,425 | INFO     | sum of deviations: 4213228416.0912304
[2025-10-12 11:44:32] 2025-10-12 15:43:37,425 | INFO     | mean x: 1760275095.291228
[2025-10-12 11:44:32] 2025-10-12 15:43:37,425 | INFO     | mean y: 2161869.396491228
[2025-10-12 11:44:32] 2025-10-12 15:43:37,426 | INFO     | -- intersect: -1031076148.2568072
[2025-10-12 11:44:32] 2025-10-12 15:43:37,429 | INFO     | intersect: -1031076148.2568072
[2025-10-12 11:44:32] 2025-10-12 15:43:37,429 | INFO     | chi2: 0.9542660549393166
[2025-10-12 11:44:32] 2025-10-12 15:43:37,430 | INFO     | current chi2=0.9542660549393166 (change=35.116304768107724 %)
[2025-10-12 11:44:32] 2025-10-12 15:43:37,430 | INFO     | sum of square deviations: 6806665238.56787
[2025-10-12 11:44:32] 2025-10-12 15:43:37,432 | INFO     | sum of deviations: -4382103819.557144
[2025-10-12 11:44:32] 2025-10-12 15:43:37,432 | INFO     | mean x: 1760275247.7892857
[2025-10-12 11:44:32] 2025-10-12 15:43:37,432 | INFO     | mean y: 2165369.4142857143
[2025-10-12 11:44:32] 2025-10-12 15:43:37,432 | INFO     | -- intersect: 1135423523.9511027
[2025-10-12 11:44:32] 2025-10-12 15:43:37,432 | INFO     | intersect: 1135423523.9511027
[2025-10-12 11:44:32] 2025-10-12 15:43:37,480 | INFO     | chi2: 0.8781581422135265
[2025-10-12 11:44:32] 2025-10-12 15:43:37,480 | INFO     | current chi2=0.8781581422135265 (change=7.975544381134873 %)
[2025-10-12 11:44:32] 2025-10-12 15:43:37,480 | INFO     | left removable region: 30
[2025-10-12 11:44:32] 2025-10-12 15:43:37,481 | INFO     | sum of square deviations: 5387126122.108096
[2025-10-12 11:44:32] 2025-10-12 15:43:37,490 | INFO     | sum of deviations: 9785678630.405401
[2025-10-12 11:44:32] 2025-10-12 15:43:37,490 | INFO     | mean x: 1760275522.2972972
[2025-10-12 11:44:32] 2025-10-12 15:43:37,491 | INFO     | mean y: 2173077.1505791508
[2025-10-12 11:44:32] 2025-10-12 15:43:37,491 | INFO     | -- intersect: -3195355655.5588884
[2025-10-12 11:44:32] 2025-10-12 15:43:37,491 | INFO     | intersect: -3195355655.5588884
[2025-10-12 11:44:32] 2025-10-12 15:43:37,491 | INFO     | chi2: 0.06704330241900144
[2025-10-12 11:44:32] 2025-10-12 15:43:37,491 | INFO     | -- intersect: -3195355655.5588884
[2025-10-12 11:44:32] 2025-10-12 15:43:37,491 | INFO     | current memory leak: 1.82 B/s (using 259 data points, chi2=0.07)
[2025-10-12 11:44:32] 2025-10-12 15:43:37,492 | INFO     | could have reported an average CPU frequency of 2825 MHz (13 samples)
[2025-10-12 11:44:32] 2025-10-12 15:43:37,492 | INFO     | ..............................
[2025-10-12 11:44:32] 2025-10-12 15:43:37,492 | INFO     | . Timing measurements:
[2025-10-12 11:44:32] 2025-10-12 15:43:37,492 | INFO     | . get job = 0 s
[2025-10-12 11:44:32] 2025-10-12 15:43:37,492 | INFO     | . initial setup = 7 s
[2025-10-12 11:44:32] 2025-10-12 15:43:37,492 | INFO     | . payload setup = 46 s
[2025-10-12 11:44:32] 2025-10-12 15:43:37,493 | INFO     | . stage-in = 0 s
[2025-10-12 11:44:32] 2025-10-12 15:43:37,493 | INFO     | . payload execution = 17977 s
[2025-10-12 11:44:32] 2025-10-12 15:43:37,521 | INFO     | . stage-out = 7 s
[2025-10-12 11:44:32] 2025-10-12 15:43:37,521 | INFO     | . log creation = 0 s
[2025-10-12 11:44:32] 2025-10-12 15:43:37,521 | INFO     | ..............................
[2025-10-12 11:44:32] 2025-10-12 15:43:38,162 | INFO     | 
[2025-10-12 11:44:32] 2025-10-12 15:43:38,162 | INFO     | job summary report
[2025-10-12 11:44:32] 2025-10-12 15:43:38,162 | INFO     | --------------------------------------------------
[2025-10-12 11:44:32] 2025-10-12 15:43:38,162 | INFO     | PanDA job id: 6839474259
[2025-10-12 11:44:32] 2025-10-12 15:43:38,162 | INFO     | task id: 46676269
[2025-10-12 11:44:32] 2025-10-12 15:43:38,162 | INFO     | errors: (none)
[2025-10-12 11:44:32] 2025-10-12 15:43:38,162 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:44:32] 2025-10-12 15:43:38,162 | INFO     | pilot state: finished 
[2025-10-12 11:44:32] 2025-10-12 15:43:38,162 | INFO     | transexitcode: 0
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | exeerrorcode: 0
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | exeerrordiag: 
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | exitcode: 0
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | exitmsg: OK
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | cpuconsumptiontime: 46143 s
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | nevents: 400
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | neventsw: 0
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | pid: 2164320
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | pgrp: 2164320
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | corecount: 9
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | event service: False
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | sizes: {0: 2348027, 1: 2348712, 2: 2348911, 3: 2348939, 14: 2348939, 25: 2348967, 36: 2349123, 40: 2349413, 47: 2349441, 18029: 2381484, 18030: 2381483, 18038: 239
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | --------------------------------------------------
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | 
[2025-10-12 11:44:32] 2025-10-12 15:43:38,163 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 11:44:32] 2025-10-12 15:43:38,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,363 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,367 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,367 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:44:32] 2025-10-12 15:43:38,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:44:32] 2025-10-12 15:43:38,369 | INFO     | job 6839474259 has completed (purged errors)
[2025-10-12 11:44:32] 2025-10-12 15:43:38,369 | INFO     | overall cleanup function is called
[2025-10-12 11:44:32] 2025-10-12 15:43:39,393 | INFO     | --- collectZombieJob: --- 10, [2164320]
[2025-10-12 11:44:32] 2025-10-12 15:43:39,393 | INFO     | zombie collector waiting for pid 2164320
[2025-10-12 11:44:32] 2025-10-12 15:43:39,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:44:32] 2025-10-12 15:43:39,393 | INFO     | collected zombie processes
[2025-10-12 11:44:32] 2025-10-12 15:43:39,393 | INFO     | will attempt to kill all subprocesses of pid=2164320
[2025-10-12 11:44:32] 2025-10-12 15:43:40,792 | INFO     | process IDs to be killed: [2164320] (in reverse order)
[2025-10-12 11:44:32] 2025-10-12 15:43:41,264 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:44:32] 2025-10-12 15:43:41,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:44:32] 2025-10-12 15:43:41,465 | INFO     | did not find any defunct processes belonging to 2164320
[2025-10-12 11:44:32] 2025-10-12 15:43:41,651 | INFO     | did not find any defunct processes belonging to 2164320
[2025-10-12 11:44:32] 2025-10-12 15:43:41,651 | INFO     | ready for new job
[2025-10-12 11:44:32] 2025-10-12 15:43:41,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:44:32] 2025-10-12 15:43:41,703 | INFO     | ***************************************
[2025-10-12 11:44:32] 2025-10-12 15:43:41,703 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:44:32] 2025-10-12 15:43:41,703 | INFO     | ***************************************
[2025-10-12 11:44:32] 2025-10-12 15:43:41,703 | INFO     | 
[2025-10-12 11:44:32] 2025-10-12 15:43:41,746 | INFO     | architecture information:
[2025-10-12 11:44:32] 2025-10-12 15:43:41,774 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:44:32] 2025-10-12 15:43:41,871 | INFO     | cat /etc/os-release:
[2025-10-12 11:44:32] NAME="CentOS Linux"
[2025-10-12 11:44:32] VERSION="7 (Core)"
[2025-10-12 11:44:32] ID="centos"
[2025-10-12 11:44:32] ID_LIKE="rhel fedora"
[2025-10-12 11:44:32] VERSION_ID="7"
[2025-10-12 11:44:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:44:32] ANSI_COLOR="0;31"
[2025-10-12 11:44:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:44:32] HOME_URL="https://www.centos.org/"
[2025-10-12 11:44:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:44:32] 
[2025-10-12 11:44:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:44:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:44:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:44:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:44:32] 
[2025-10-12 11:44:32] 2025-10-12 15:43:41,872 | INFO     | ***************************************
[2025-10-12 11:44:32] 2025-10-12 15:43:42,375 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 11:44:32] 2025-10-12 15:43:42,474 | INFO     | sufficient remaining disk space (75090624512 B)
[2025-10-12 11:44:32] 2025-10-12 15:43:42,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:44:32] 2025-10-12 15:43:42,474 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:44:32] 2025-10-12 15:43:42,474 | INFO     | update_server=False
[2025-10-12 11:44:32] 2025-10-12 15:43:42,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:44:32] 2025-10-12 15:43:42,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:44:32] 2025-10-12 15:43:42,653 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 11:44:32] 2025-10-12 15:43:42,653 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 11:44:32] 2025-10-12 15:43:42,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:44:32] 2025-10-12 15:43:42,653 | INFO     | will abort loop
[2025-10-12 11:44:32] 2025-10-12 15:43:42,731 | INFO     | all data control threads have been joined
[2025-10-12 11:44:32] 2025-10-12 15:43:43,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:44:32] 2025-10-12 15:43:43,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:44:32] 2025-10-12 15:43:43,328 | INFO     | all job control threads have been joined
[2025-10-12 11:44:32] 2025-10-12 15:43:43,480 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:43,659 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:43,737 | INFO     | [data] control thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:43,810 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:43,819 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:43,854 | INFO     | [job] validate thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:43,957 | INFO     | all payload control threads have been joined
[2025-10-12 11:44:32] 2025-10-12 15:43:43,967 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:44,118 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:44,121 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:44,181 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:44,334 | INFO     | [job] control thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:44,784 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:44,963 | INFO     | [payload] control thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:44,979 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:45,113 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:43:46,485 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:44:32] 2025-10-12 15:44:12,874 | INFO     | PID=2138688 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:44:32] 2025-10-12 15:44:12,874 | INFO     | .. there are 83 such processes running
[2025-10-12 11:44:32] 2025-10-12 15:44:12,875 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:44:32] 2025-10-12 15:44:12,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:44:32] 2025-10-12 15:44:12,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:44:32] 2025-10-12 15:44:24,554 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:44:32] 2025-10-12 15:44:25,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140547499087680)>', '<ExcThread(monitor, started 140546999826176)>']
[2025-10-12 11:44:32] 2025-10-12 15:44:25,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:44:32] 2025-10-12 15:44:25,975 | INFO     | [monitor] control thread has ended
[2025-10-12 11:44:32] 2025-10-12 15:44:30,586 | INFO     | all workflow threads have been joined
[2025-10-12 11:44:32] 2025-10-12 15:44:30,586 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:44:32] 2025-10-12 15:44:30,586 | INFO     | traces error code: 0
[2025-10-12 11:44:32] 2025-10-12 15:44:30,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:44:32] 2025-10-12 15:44:31,252 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:44:32] 2025-10-12 15:44:31,270 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:44:32] 2025-10-12 15:44:31,334 [wrapper] pilotpid: 2138688
[2025-10-12 11:44:32] 2025-10-12 15:44:31,347 [wrapper] Pilot exit status: 0
[2025-10-12 11:44:32] 2025-10-12 15:44:31,564 [wrapper] pandaids: 6839474259
[2025-10-12 11:44:32] 2025-10-12 15:44:32,300 [wrapper] cleanup supervisor_pilot 3482403 2138689
[2025-10-12 11:44:32] 2025-10-12 15:44:32,334 [wrapper] Test setup, not cleaning
[2025-10-12 11:44:32] 2025-10-12 15:44:32,351 [wrapper] apfmon messages muted
[2025-10-12 11:44:32] 2025-10-12 15:44:32,368 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:44:32] 2025-10-12 15:44:32,394 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:44:32]  *** Error codes and diagnostics ***
[2025-10-12 11:44:32]     "exeErrorCode": 0,
[2025-10-12 11:44:32]     "exeErrorDiag": "",
[2025-10-12 11:44:32]     "pilotErrorCode": 0,
[2025-10-12 11:44:32]     "pilotErrorDiag": "",
[2025-10-12 11:44:32]  *** Listing of results directory ***
[2025-10-12 11:44:33] total 415128
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-12 11:44:33] -rwx------. 1 boincer umatlas     36292 Oct 12 01:12 runpilot2-wrapper.sh
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 01:12 queuedata.json
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas       100 Oct 12 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:44:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 06:39 run_atlas
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas       105 Oct 12 06:39 job.xml
[2025-10-12 11:44:33] -rw-r--r--. 2 boincer umatlas 219272915 Oct 12 06:39 EVNT.46676267._004310.pool.root.1
[2025-10-12 11:44:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:39 start_atlas.sh
[2025-10-12 11:44:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 06:39 shared
[2025-10-12 11:44:33] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 06:39 input.tar.gz
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas         0 Oct 12 06:39 boinc_lockfile
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 06:39 pandaJob.out
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas    975520 Oct 12 06:40 agis_schedconf.cvmfs.json
[2025-10-12 11:44:33] drwx------. 5 boincer umatlas      4096 Oct 12 06:40 pilot3
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas      6839 Oct 12 11:40 init_data.xml
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas 196971838 Oct 12 11:41 HITS.46676269._071625.pool.root.1
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas       531 Oct 12 11:41 boinc_task_state.xml
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas      1043 Oct 12 11:42 memory_monitor_summary.json
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas   1560580 Oct 12 11:42 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas    484048 Oct 12 11:42 log.46676269._071625.job.log.tgz.1
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas      7821 Oct 12 11:43 heartbeat.json
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas        95 Oct 12 11:44 pilot_heartbeat.json
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas      5010 Oct 12 11:44 pilotlog.txt
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:44 boinc_mmap_file
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas   1985887 Oct 12 11:44 log.46676269._071625.job.log.1
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas        28 Oct 12 11:44 wrapper_checkpoint.txt
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas       357 Oct 12 11:44 output.list
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:44 runtime_log
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas   2488320 Oct 12 11:44 result.tar.gz
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 11:44 runtime_log.err
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas       652 Oct 12 11:44 cafLDmzY3R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTGTMDmY3AMPo.diag
[2025-10-12 11:44:33] -rw-r--r--. 1 boincer umatlas     21067 Oct 12 11:44 stderr.txt
[2025-10-12 11:44:33] HITS file was successfully produced:
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas 196971838 Oct 12 11:41 shared/HITS.pool.root.1
[2025-10-12 11:44:33]  *** Contents of shared directory: ***
[2025-10-12 11:44:33] total 409508
[2025-10-12 11:44:33] -rw-r--r--. 2 boincer umatlas 219272915 Oct 12 06:39 ATLAS.root_0
[2025-10-12 11:44:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:39 start_atlas.sh
[2025-10-12 11:44:33] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 06:39 input.tar.gz
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas 196971838 Oct 12 11:41 HITS.pool.root.1
[2025-10-12 11:44:33] -rw-------. 1 boincer umatlas   2488320 Oct 12 11:44 result.tar.gz
11:44:34 (2123893): run_atlas exited; CPU time 47134.024703
11:44:34 (2123893): called boinc_finish(0)

</stderr_txt>
]]>

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