Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:57:57 (3567866): wrapper (7.7.26015): starting
17:57:57 (3567866): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 17:57:57] Arguments: --nthreads 4
[2025-10-13 17:57:57] Threads: 4
[2025-10-13 17:57:57] Checking for CVMFS
[2025-10-13 17:57:57] No cvmfs_config command found, will try listing directly
[2025-10-13 17:57:57] CVMFS is ok
[2025-10-13 17:57:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:57:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:57:57] Further information can be found at the LHC@home message board.
[2025-10-13 17:57:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:57:57] Checking for apptainer binary...
[2025-10-13 17:57:57] which: no apptainer in ((null))
[2025-10-13 17:57:57] apptainer is not installed, using version from CVMFS
[2025-10-13 17:57:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:57:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-13 17:57:58] apptainer works
[2025-10-13 17:57:58] Set ATHENA_PROC_NUMBER=4
[2025-10-13 17:57:58] Set ATHENA_CORE_NUMBER=4
[2025-10-13 17:57:58] Starting ATLAS job with PandaID=6839164740
[2025-10-13 17:57:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:05:59 (3753488): wrapper (7.7.26015): starting
19:05:59 (3753488): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 19:05:59] Arguments: --nthreads 4
[2025-10-13 19:05:59] Threads: 4
[2025-10-13 19:05:59] This job has been restarted, cleaning up previous attempt
[2025-10-13 19:05:59] Checking for CVMFS
[2025-10-13 19:05:59] No cvmfs_config command found, will try listing directly
[2025-10-13 19:05:59] CVMFS is ok
[2025-10-13 19:05:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:05:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:05:59] Further information can be found at the LHC@home message board.
[2025-10-13 19:05:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:05:59] Checking for apptainer binary...
[2025-10-13 19:05:59] which: no apptainer in ((null))
[2025-10-13 19:05:59] apptainer is not installed, using version from CVMFS
[2025-10-13 19:05:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:05:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-13 19:05:59] apptainer works
[2025-10-13 19:05:59] Set ATHENA_PROC_NUMBER=4
[2025-10-13 19:05:59] Set ATHENA_CORE_NUMBER=4
[2025-10-13 19:05:59] Starting ATLAS job with PandaID=6839164740
[2025-10-13 19:05:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:47:16]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:47:16] 2025-10-13 19:37:13,453 | INFO     | intersect: -34968057150.17215
[2025-10-13 21:47:16] 2025-10-13 19:37:13,453 | INFO     | chi2: 1.2645495430712155
[2025-10-13 21:47:16] 2025-10-13 19:37:13,453 | INFO     | sum of square deviations: 906703512.0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,454 | INFO     | sum of deviations: 19344388319.999996
[2025-10-13 21:47:16] 2025-10-13 19:37:13,454 | INFO     | mean x: 1760379537.0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,454 | INFO     | mean y: 2307428.958041958
[2025-10-13 21:47:16] 2025-10-13 19:37:13,454 | INFO     | -- intersect: -37555135443.62433
[2025-10-13 21:47:16] 2025-10-13 19:37:13,454 | INFO     | intersect: -37555135443.62433
[2025-10-13 21:47:16] 2025-10-13 19:37:13,455 | INFO     | chi2: 1.2651608754643522
[2025-10-13 21:47:16] 2025-10-13 19:37:13,455 | INFO     | current chi2=1.2651608754643522 (change=-0.04834388628633441 %)
[2025-10-13 21:47:16] 2025-10-13 19:37:13,455 | INFO     | right removable region: 142
[2025-10-13 21:47:16] 2025-10-13 19:37:13,455 | INFO     | sum of square deviations: 906703512.0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,456 | INFO     | sum of deviations: 2234149156.0000005
[2025-10-13 21:47:16] 2025-10-13 19:37:13,456 | INFO     | mean x: 1760379842.0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,456 | INFO     | mean y: 2335349.6293706293
[2025-10-13 21:47:16] 2025-10-13 19:37:13,456 | INFO     | -- intersect: -4335302131.853897
[2025-10-13 21:47:16] 2025-10-13 19:37:13,456 | INFO     | intersect: -4335302131.853897
[2025-10-13 21:47:16] 2025-10-13 19:37:13,456 | INFO     | chi2: 0.0015632450419277217
[2025-10-13 21:47:16] 2025-10-13 19:37:13,456 | INFO     | current chi2=0.0015632450419277217 (change=99.87637929644647 %)
[2025-10-13 21:47:16] 2025-10-13 19:37:13,457 | INFO     | sum of square deviations: 814878534.5
[2025-10-13 21:47:16] 2025-10-13 19:37:13,457 | INFO     | sum of deviations: 1656064996.5000005
[2025-10-13 21:47:16] 2025-10-13 19:37:13,458 | INFO     | mean x: 1760379994.5
[2025-10-13 21:47:16] 2025-10-13 19:37:13,458 | INFO     | mean y: 2336318.9637681157
[2025-10-13 21:47:16] 2025-10-13 19:37:13,458 | INFO     | -- intersect: -3575256617.9014907
[2025-10-13 21:47:16] 2025-10-13 19:37:13,458 | INFO     | intersect: -3575256617.9014907
[2025-10-13 21:47:16] 2025-10-13 19:37:13,458 | INFO     | chi2: 0.0010576527628122455
[2025-10-13 21:47:16] 2025-10-13 19:37:13,458 | INFO     | current chi2=0.0010576527628122455 (change=32.34248409910215 %)
[2025-10-13 21:47:16] 2025-10-13 19:37:13,458 | INFO     | sum of square deviations: 729472282.0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,459 | INFO     | sum of deviations: 1122659493.9999998
[2025-10-13 21:47:16] 2025-10-13 19:37:13,459 | INFO     | mean x: 1760380147.0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,459 | INFO     | mean y: 2337264.977443609
[2025-10-13 21:47:16] 2025-10-13 19:37:13,459 | INFO     | -- intersect: -2706891767.906722
[2025-10-13 21:47:16] 2025-10-13 19:37:13,459 | INFO     | intersect: -2706891767.906722
[2025-10-13 21:47:16] 2025-10-13 19:37:13,459 | INFO     | chi2: 0.0006614210653432839
[2025-10-13 21:47:16] 2025-10-13 19:37:13,460 | INFO     | current chi2=0.0006614210653432839 (change=37.463306616379604 %)
[2025-10-13 21:47:16] 2025-10-13 19:37:13,460 | INFO     | sum of square deviations: 650252192.0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,461 | INFO     | sum of deviations: 803773789.5
[2025-10-13 21:47:16] 2025-10-13 19:37:13,461 | INFO     | mean x: 1760380299.5
[2025-10-13 21:47:16] 2025-10-13 19:37:13,461 | INFO     | mean y: 2337879.1953125
[2025-10-13 21:47:16] 2025-10-13 19:37:13,461 | INFO     | -- intersect: -2173660236.148618
[2025-10-13 21:47:16] 2025-10-13 19:37:13,461 | INFO     | intersect: -2173660236.148618
[2025-10-13 21:47:16] 2025-10-13 19:37:13,461 | INFO     | chi2: 0.0005602686398408948
[2025-10-13 21:47:16] 2025-10-13 19:37:13,461 | INFO     | current chi2=0.0005602686398408948 (change=15.293196845777803 %)
[2025-10-13 21:47:16] 2025-10-13 19:37:13,461 | INFO     | left removable region: 40
[2025-10-13 21:47:16] 2025-10-13 19:37:13,461 | INFO     | sum of square deviations: 329031285.5
[2025-10-13 21:47:16] 2025-10-13 19:37:13,462 | INFO     | sum of deviations: 11574475.499999994
[2025-10-13 21:47:16] 2025-10-13 19:37:13,462 | INFO     | mean x: 1760380726.5
[2025-10-13 21:47:16] 2025-10-13 19:37:13,462 | INFO     | mean y: 2340136.6960784313
[2025-10-13 21:47:16] 2025-10-13 19:37:13,462 | INFO     | -- intersect: -59585535.686666586
[2025-10-13 21:47:16] 2025-10-13 19:37:13,462 | INFO     | intersect: -59585535.686666586
[2025-10-13 21:47:16] 2025-10-13 19:37:13,462 | INFO     | chi2: 0.00016973765368142053
[2025-10-13 21:47:16] 2025-10-13 19:37:13,463 | INFO     | -- intersect: -59585535.686666586
[2025-10-13 21:47:16] 2025-10-13 19:37:13,463 | INFO     | current memory leak: 0.04 B/s (using 102 data points, chi2=0.00)
[2025-10-13 21:47:16] 2025-10-13 19:37:13,463 | INFO     | could have reported an average CPU frequency of 2717 MHz (8 samples)
[2025-10-13 21:47:16] 2025-10-13 19:37:13,463 | INFO     | ..............................
[2025-10-13 21:47:16] 2025-10-13 19:37:13,463 | INFO     | . Timing measurements:
[2025-10-13 21:47:16] 2025-10-13 19:37:13,463 | INFO     | . get job = 0 s
[2025-10-13 21:47:16] 2025-10-13 19:37:13,463 | INFO     | . initial setup = 1 s
[2025-10-13 21:47:16] 2025-10-13 19:37:13,463 | INFO     | . payload setup = 8 s
[2025-10-13 21:47:16] 2025-10-13 19:37:13,463 | INFO     | . stage-in = 0 s
[2025-10-13 21:47:16] 2025-10-13 19:37:13,464 | INFO     | . payload execution = 9022 s
[2025-10-13 21:47:16] 2025-10-13 19:37:13,464 | INFO     | . stage-out = 1 s
[2025-10-13 21:47:16] 2025-10-13 19:37:13,464 | INFO     | . log creation = 0 s
[2025-10-13 21:47:16] 2025-10-13 19:37:13,464 | INFO     | ..............................
[2025-10-13 21:47:16] 2025-10-13 19:37:13,562 | INFO     | 
[2025-10-13 21:47:16] 2025-10-13 19:37:13,563 | INFO     | job summary report
[2025-10-13 21:47:16] 2025-10-13 19:37:13,563 | INFO     | --------------------------------------------------
[2025-10-13 21:47:16] 2025-10-13 19:37:13,563 | INFO     | PanDA job id: 6839164740
[2025-10-13 21:47:16] 2025-10-13 19:37:13,563 | INFO     | task id: 46676269
[2025-10-13 21:47:16] 2025-10-13 19:37:13,563 | INFO     | errors: (none)
[2025-10-13 21:47:16] 2025-10-13 19:37:13,563 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:47:16] 2025-10-13 19:37:13,563 | INFO     | pilot state: finished 
[2025-10-13 21:47:16] 2025-10-13 19:37:13,563 | INFO     | transexitcode: 0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,563 | INFO     | exeerrorcode: 0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,564 | INFO     | exeerrordiag: 
[2025-10-13 21:47:16] 2025-10-13 19:37:13,564 | INFO     | exitcode: 0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,564 | INFO     | exitmsg: OK
[2025-10-13 21:47:16] 2025-10-13 19:37:13,564 | INFO     | cpuconsumptiontime: 34644 s
[2025-10-13 21:47:16] 2025-10-13 19:37:13,564 | INFO     | nevents: 400
[2025-10-13 21:47:16] 2025-10-13 19:37:13,564 | INFO     | neventsw: 0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,564 | INFO     | pid: 3803585
[2025-10-13 21:47:16] 2025-10-13 19:37:13,564 | INFO     | pgrp: 3803585
[2025-10-13 21:47:16] 2025-10-13 19:37:13,564 | INFO     | corecount: 4
[2025-10-13 21:47:16] 2025-10-13 19:37:13,564 | INFO     | event service: False
[2025-10-13 21:47:16] 2025-10-13 19:37:13,564 | INFO     | sizes: {0: 2348698, 1: 2348897, 7: 2349159, 11: 2349187, 9034: 2377891, 9036: 2387097, 9043: 2387235}
[2025-10-13 21:47:16] 2025-10-13 19:37:13,565 | INFO     | --------------------------------------------------
[2025-10-13 21:47:16] 2025-10-13 19:37:13,565 | INFO     | 
[2025-10-13 21:47:16] 2025-10-13 19:37:13,565 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-10-13 21:47:16] 2025-10-13 19:37:13,596 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,597 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,597 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,598 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:47:16] 2025-10-13 19:37:13,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:37:13,598 | INFO     | job 6839164740 has completed (purged errors)
[2025-10-13 21:47:16] 2025-10-13 19:37:13,599 | INFO     | overall cleanup function is called
[2025-10-13 21:47:16] 2025-10-13 19:37:14,609 | INFO     | --- collectZombieJob: --- 10, [3803585]
[2025-10-13 21:47:16] 2025-10-13 19:37:14,609 | INFO     | zombie collector waiting for pid 3803585
[2025-10-13 21:47:16] 2025-10-13 19:37:14,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:47:16] 2025-10-13 19:37:14,610 | INFO     | collected zombie processes
[2025-10-13 21:47:16] 2025-10-13 19:37:14,610 | INFO     | will attempt to kill all subprocesses of pid=3803585
[2025-10-13 21:47:16] 2025-10-13 19:37:15,313 | INFO     | process IDs to be killed: [3803585] (in reverse order)
[2025-10-13 21:47:16] 2025-10-13 19:37:15,538 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:47:16] 2025-10-13 19:37:15,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:47:16] 2025-10-13 19:37:15,570 | INFO     | did not find any defunct processes belonging to 3803585
[2025-10-13 21:47:16] 2025-10-13 19:37:15,598 | INFO     | did not find any defunct processes belonging to 3803585
[2025-10-13 21:47:16] 2025-10-13 19:37:15,599 | INFO     | ready for new job
[2025-10-13 21:47:16] 2025-10-13 19:37:15,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:47:16] 2025-10-13 19:37:15,601 | INFO     | ***************************************
[2025-10-13 21:47:16] 2025-10-13 19:37:15,601 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:47:16] 2025-10-13 19:37:15,602 | INFO     | ***************************************
[2025-10-13 21:47:16] 2025-10-13 19:37:15,602 | INFO     | 
[2025-10-13 21:47:16] 2025-10-13 19:37:15,610 | INFO     | architecture information:
[2025-10-13 21:47:16] 2025-10-13 19:37:15,610 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:47:16] 2025-10-13 19:37:15,632 | INFO     | cat /etc/os-release:
[2025-10-13 21:47:16] NAME="CentOS Linux"
[2025-10-13 21:47:16] VERSION="7 (Core)"
[2025-10-13 21:47:16] ID="centos"
[2025-10-13 21:47:16] ID_LIKE="rhel fedora"
[2025-10-13 21:47:16] VERSION_ID="7"
[2025-10-13 21:47:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:47:16] ANSI_COLOR="0;31"
[2025-10-13 21:47:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:47:16] HOME_URL="https://www.centos.org/"
[2025-10-13 21:47:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:47:16] 
[2025-10-13 21:47:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:47:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:47:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:47:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:47:16] 
[2025-10-13 21:47:16] 2025-10-13 19:37:15,632 | INFO     | ***************************************
[2025-10-13 21:47:16] 2025-10-13 19:37:16,135 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-10-13 21:47:16] 2025-10-13 19:37:16,158 | INFO     | sufficient remaining disk space (3346508283904 B)
[2025-10-13 21:47:16] 2025-10-13 19:37:16,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:47:16] 2025-10-13 19:37:16,159 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:47:16] 2025-10-13 19:37:16,159 | INFO     | update_server=False
[2025-10-13 21:47:16] 2025-10-13 19:37:16,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:47:16] 2025-10-13 19:37:16,171 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:47:16] 2025-10-13 19:37:16,171 | INFO     | aborting loop
[2025-10-13 21:47:16] 2025-10-13 19:37:16,649 | INFO     | all job control threads have been joined
[2025-10-13 21:47:16] 2025-10-13 19:37:16,820 | INFO     | all data control threads have been joined
[2025-10-13 21:47:16] 2025-10-13 19:37:16,823 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:47:16] 2025-10-13 19:37:16,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:47:16] 2025-10-13 19:37:17,075 | INFO     | all payload control threads have been joined
[2025-10-13 21:47:16] 2025-10-13 19:37:17,164 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:17,177 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:17,200 | INFO     | [job] validate thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:17,274 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:17,570 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:17,654 | INFO     | [job] control thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:17,678 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:17,824 | INFO     | [data] control thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:17,957 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:18,056 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:18,080 | INFO     | [payload] control thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:18,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:47:16] 2025-10-13 19:37:18,634 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:18,829 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:19,579 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:20,926 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:26,330 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:47:16] 2025-10-13 19:37:26,887 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:47:16] 2025-10-13 19:37:27,335 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:37:27,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22849207195456)>', '<ExcThread(monitor, started 22848974325504)>']
[2025-10-13 21:47:16] 2025-10-13 19:37:33,021 | INFO     | all workflow threads have been joined
[2025-10-13 21:47:16] 2025-10-13 19:37:33,021 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:47:16] 2025-10-13 19:37:33,022 | INFO     | traces error code: 0
[2025-10-13 21:47:16] 2025-10-13 19:37:33,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:47:16] 2025-10-13 19:37:46,330 | INFO     | PID=3766903 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:47:16] 2025-10-13 19:37:46,330 | INFO     | .. there are 6 such processes running
[2025-10-13 21:47:16] 2025-10-13 19:37:46,330 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:47:16] 2025-10-13 19:37:46,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:47:16] 2025-10-13 19:37:46,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:47:16] 2025-10-13 19:37:46,330 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:47:16] 2025-10-13 19:37:46,330 | INFO     | [monitor] control thread has ended
[2025-10-13 21:47:16] 2025-10-13 19:37:46,479 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:47:16] 2025-10-13 19:37:46,484 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:47:16] 2025-10-13 19:37:46,487 [wrapper] pilotpid: 3766903
[2025-10-13 21:47:16] 2025-10-13 19:37:46,491 [wrapper] Pilot exit status: 0
[2025-10-13 21:47:16] 2025-10-13 19:37:46,505 [wrapper] pandaids: 6839164740 6839164740
[2025-10-13 21:47:16] 2025-10-13 19:37:46,675 [wrapper] cleanup supervisor_pilot   29571 3766904
[2025-10-13 21:47:16] 2025-10-13 19:37:46,679 [wrapper] Test setup, not cleaning
[2025-10-13 21:47:16] 2025-10-13 19:37:46,682 [wrapper] apfmon messages muted
[2025-10-13 21:47:16] 2025-10-13 19:37:46,686 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:47:16] 2025-10-13 19:37:46,690 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:47:16]  *** Error codes and diagnostics ***
[2025-10-13 21:47:16]     "exeErrorCode": 0,
[2025-10-13 21:47:16]     "exeErrorDiag": "",
[2025-10-13 21:47:16]     "pilotErrorCode": 0,
[2025-10-13 21:47:16]     "pilotErrorDiag": "",
[2025-10-13 21:47:16]  *** Listing of results directory ***
[2025-10-13 21:47:16] total 626852
[2025-10-13 21:47:16] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:02 pilot3.tar.gz
[2025-10-13 21:47:16] -rwx------ 1 boinc boinc     36292 Oct 12 03:20 runpilot2-wrapper.sh
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc      5112 Oct 12 03:20 queuedata.json
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:47:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:57 run_atlas
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:57 job.xml
[2025-10-13 21:47:16] -rw-r--r-- 3 boinc boinc 220406904 Oct 13 17:57 EVNT.46676267._003126.pool.root.1
[2025-10-13 21:47:16] -rw-r--r-- 3 boinc boinc 220406904 Oct 13 17:57 ATLAS.root_0
[2025-10-13 21:47:16] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:57 start_atlas.sh
[2025-10-13 21:47:16] drwxrwx--x 2 boinc boinc      4096 Oct 13 17:57 shared
[2025-10-13 21:47:16] -rw-r--r-- 2 boinc boinc    569671 Oct 13 17:57 input.tar.gz
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:57 boinc_lockfile
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc      6693 Oct 13 19:05 init_data.xml
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc      2550 Oct 13 19:05 pandaJob.out
[2025-10-13 21:47:16] -rw------- 1 boinc boinc    972783 Oct 13 19:06 agis_schedconf.cvmfs.json
[2025-10-13 21:47:16] -rw------- 1 boinc boinc 193982068 Oct 13 21:36 HITS.46676269._068231.pool.root.1
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc       528 Oct 13 21:36 boinc_task_state.xml
[2025-10-13 21:47:16] -rw------- 1 boinc boinc        97 Oct 13 21:36 pilot_heartbeat.json
[2025-10-13 21:47:16] -rw------- 1 boinc boinc      1051 Oct 13 21:37 memory_monitor_summary.json
[2025-10-13 21:47:16] -rw------- 1 boinc boinc   1560580 Oct 13 21:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:47:16] -rw------- 1 boinc boinc    324382 Oct 13 21:37 log.46676269._068231.job.log.tgz.1
[2025-10-13 21:47:16] -rw------- 1 boinc boinc      7800 Oct 13 21:37 heartbeat.json
[2025-10-13 21:47:16] -rw------- 1 boinc boinc       822 Oct 13 21:37 pilotlog.txt
[2025-10-13 21:47:16] -rw------- 1 boinc boinc   1270141 Oct 13 21:37 log.46676269._068231.job.log.1
[2025-10-13 21:47:16] -rw------- 1 boinc boinc       357 Oct 13 21:37 output.list
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:37 runtime_log
[2025-10-13 21:47:16] -rw------- 1 boinc boinc   1617920 Oct 13 21:37 result.tar.gz
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc      9161 Oct 13 21:37 runtime_log.err
[2025-10-13 21:47:16] -rw------- 1 boinc boinc       792 Oct 13 21:37 ROjLDmAwzR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTAiNDmUYAVgm.diag
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc        26 Oct 13 21:47 wrapper_checkpoint.txt
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:47 boinc_mmap_file
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc     22615 Oct 13 21:47 stderr.txt
[2025-10-13 21:47:17] HITS file was successfully produced:
[2025-10-13 21:47:17] -rw------- 1 boinc boinc 193982068 Oct 13 21:36 shared/HITS.pool.root.1
[2025-10-13 21:47:17]  *** Contents of shared directory: ***
[2025-10-13 21:47:17] total 406844
[2025-10-13 21:47:17] -rw-r--r-- 3 boinc boinc 220406904 Oct 13 17:57 ATLAS.root_0
[2025-10-13 21:47:17] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:57 start_atlas.sh
[2025-10-13 21:47:17] -rw-r--r-- 2 boinc boinc    569671 Oct 13 17:57 input.tar.gz
[2025-10-13 21:47:17] -rw------- 1 boinc boinc 193982068 Oct 13 21:36 HITS.pool.root.1
[2025-10-13 21:47:17] -rw------- 1 boinc boinc   1617920 Oct 13 21:37 result.tar.gz
21:47:18 (3753488): run_atlas exited; CPU time 35205.667103
21:47:18 (3753488): called boinc_finish(0)

</stderr_txt>
]]>

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