Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:24:59 (3539849): wrapper (7.7.26015): starting
09:24:59 (3539849): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:24:59] Arguments: --nthreads 8
[2025-10-12 09:24:59] Threads: 8
[2025-10-12 09:24:59] Checking for CVMFS
[2025-10-12 09:24:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:24:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:24:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:25:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:25:00] 2.13.2.0 97685 138171 285652 151621 1 65 25665118 32935937 27104 16776704 0 218978253 99.619 226930786 29499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 09:25:00] CVMFS is ok
[2025-10-12 09:25:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:25:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:25:00] Further information can be found at the LHC@home message board.
[2025-10-12 09:25:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:25:00] Checking for apptainer binary...
[2025-10-12 09:25:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:25:00] Running /usr/bin/apptainer --version
[2025-10-12 09:25:00] apptainer version 1.4.3-1.el9
[2025-10-12 09:25:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:25:01] c6-4-5-1.aglt2.org
[2025-10-12 09:25:01] apptainer works
[2025-10-12 09:25:01] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:25:01] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:25:02] Starting ATLAS job with PandaID=6839475093
[2025-10-12 09:25:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:47:21]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:47:21] 2025-10-12 16:46:31,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:47:21] 2025-10-12 16:46:31,019 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:47:21] 2025-10-12 16:46:31,020 | INFO     | sum of square deviations: 2299136309.517936
[2025-10-12 12:47:21] 2025-10-12 16:46:31,021 | INFO     | sum of deviations: -30686298937.93846
[2025-10-12 12:47:21] 2025-10-12 16:46:31,021 | INFO     | mean x: 1760281587.579487
[2025-10-12 12:47:21] 2025-10-12 16:46:31,021 | INFO     | mean y: 2207735.4153846153
[2025-10-12 12:47:21] 2025-10-12 16:46:31,021 | INFO     | -- intersect: 23496476773.660786
[2025-10-12 12:47:21] 2025-10-12 16:46:31,021 | INFO     | intersect: 23496476773.660786
[2025-10-12 12:47:21] 2025-10-12 16:46:31,022 | INFO     | chi2: 2.7225018942938886
[2025-10-12 12:47:21] 2025-10-12 16:46:31,022 | INFO     | sum of square deviations: 2126792733.4789484
[2025-10-12 12:47:21] 2025-10-12 16:46:31,023 | INFO     | sum of deviations: -15817827654.657894
[2025-10-12 12:47:21] 2025-10-12 16:46:31,023 | INFO     | mean x: 1760281435.0894737
[2025-10-12 12:47:21] 2025-10-12 16:46:31,023 | INFO     | mean y: 2220701.9210526315
[2025-10-12 12:47:21] 2025-10-12 16:46:31,023 | INFO     | -- intersect: 13094153886.398792
[2025-10-12 12:47:21] 2025-10-12 16:46:31,023 | INFO     | intersect: 13094153886.398792
[2025-10-12 12:47:21] 2025-10-12 16:46:31,023 | INFO     | chi2: 2.0167353198662656
[2025-10-12 12:47:21] 2025-10-12 16:46:31,023 | INFO     | current chi2=2.0167353198662656 (change=25.92345577084241 %)
[2025-10-12 12:47:21] 2025-10-12 16:46:31,037 | INFO     | sum of square deviations: 1963263474.778382
[2025-10-12 12:47:21] 2025-10-12 16:46:31,038 | INFO     | sum of deviations: -15327291012.335138
[2025-10-12 12:47:21] 2025-10-12 16:46:31,039 | INFO     | mean x: 1760281282.5891893
[2025-10-12 12:47:21] 2025-10-12 16:46:31,039 | INFO     | mean y: 2221165.2324324325
[2025-10-12 12:47:21] 2025-10-12 16:46:31,039 | INFO     | -- intersect: 13744820581.164957
[2025-10-12 12:47:21] 2025-10-12 16:46:31,039 | INFO     | intersect: 13744820581.164957
[2025-10-12 12:47:21] 2025-10-12 16:46:31,039 | INFO     | chi2: 2.012993625707865
[2025-10-12 12:47:21] 2025-10-12 16:46:31,039 | INFO     | current chi2=2.012993625707865 (change=0.185532237252079 %)
[2025-10-12 12:47:21] 2025-10-12 16:46:31,039 | INFO     | right removable region: 184
[2025-10-12 12:47:21] 2025-10-12 16:46:31,040 | INFO     | sum of square deviations: 2126735820.2947311
[2025-10-12 12:47:21] 2025-10-12 16:46:31,041 | INFO     | sum of deviations: -59861366211.00002
[2025-10-12 12:47:21] 2025-10-12 16:46:31,041 | INFO     | mean x: 1760281740.0947368
[2025-10-12 12:47:21] 2025-10-12 16:46:31,041 | INFO     | mean y: 2233327.0
[2025-10-12 12:47:21] 2025-10-12 16:46:31,041 | INFO     | -- intersect: 49548993612.32045
[2025-10-12 12:47:21] 2025-10-12 16:46:31,041 | INFO     | intersect: 49548993612.32045
[2025-10-12 12:47:21] 2025-10-12 16:46:31,041 | INFO     | chi2: 1.140151045088591
[2025-10-12 12:47:21] 2025-10-12 16:46:31,041 | INFO     | current chi2=1.140151045088591 (change=58.121202873054315 %)
[2025-10-12 12:47:21] 2025-10-12 16:46:31,042 | INFO     | sum of square deviations: 1963195642.4000015
[2025-10-12 12:47:21] 2025-10-12 16:46:31,043 | INFO     | sum of deviations: -57463105487.40002
[2025-10-12 12:47:21] 2025-10-12 16:46:31,043 | INFO     | mean x: 1760281892.6
[2025-10-12 12:47:21] 2025-10-12 16:46:31,043 | INFO     | mean y: 2231023.5621621623
[2025-10-12 12:47:21] 2025-10-12 16:46:31,043 | INFO     | -- intersect: 51526012911.33
[2025-10-12 12:47:21] 2025-10-12 16:46:31,043 | INFO     | intersect: 51526012911.33
[2025-10-12 12:47:21] 2025-10-12 16:46:31,043 | INFO     | chi2: 1.1072232912693898
[2025-10-12 12:47:21] 2025-10-12 16:46:31,043 | INFO     | current chi2=1.1072232912693898 (change=2.888016808039911 %)
[2025-10-12 12:47:21] 2025-10-12 16:46:31,047 | INFO     | left removable region: 20
[2025-10-12 12:47:21] 2025-10-12 16:46:31,047 | INFO     | sum of square deviations: 1367648305.5609758
[2025-10-12 12:47:21] 2025-10-12 16:46:31,048 | INFO     | sum of deviations: -28140214964.8049
[2025-10-12 12:47:21] 2025-10-12 16:46:31,048 | INFO     | mean x: 1760281862.121951
[2025-10-12 12:47:21] 2025-10-12 16:46:31,048 | INFO     | mean y: 2232028.3902439023
[2025-10-12 12:47:21] 2025-10-12 16:46:31,049 | INFO     | -- intersect: 36221126752.52829
[2025-10-12 12:47:21] 2025-10-12 16:46:31,049 | INFO     | intersect: 36221126752.52829
[2025-10-12 12:47:21] 2025-10-12 16:46:31,049 | INFO     | chi2: 0.3298322289904435
[2025-10-12 12:47:21] 2025-10-12 16:46:31,049 | INFO     | -- intersect: 36221126752.52829
[2025-10-12 12:47:21] 2025-10-12 16:46:31,049 | INFO     | current memory leak: -20.58 B/s (using 164 data points, chi2=0.33)
[2025-10-12 12:47:21] 2025-10-12 16:46:31,050 | INFO     | could have reported an average CPU frequency of 2870 MHz (10 samples)
[2025-10-12 12:47:21] 2025-10-12 16:46:31,050 | INFO     | ..............................
[2025-10-12 12:47:21] 2025-10-12 16:46:31,050 | INFO     | . Timing measurements:
[2025-10-12 12:47:21] 2025-10-12 16:46:31,050 | INFO     | . get job = 0 s
[2025-10-12 12:47:21] 2025-10-12 16:46:31,050 | INFO     | . initial setup = 3 s
[2025-10-12 12:47:21] 2025-10-12 16:46:31,050 | INFO     | . payload setup = 29 s
[2025-10-12 12:47:21] 2025-10-12 16:46:31,050 | INFO     | . stage-in = 0 s
[2025-10-12 12:47:21] 2025-10-12 16:46:31,050 | INFO     | . payload execution = 11901 s
[2025-10-12 12:47:21] 2025-10-12 16:46:31,050 | INFO     | . stage-out = 8 s
[2025-10-12 12:47:21] 2025-10-12 16:46:31,050 | INFO     | . log creation = 0 s
[2025-10-12 12:47:21] 2025-10-12 16:46:31,050 | INFO     | ..............................
[2025-10-12 12:47:21] 2025-10-12 16:46:31,355 | INFO     | 
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | job summary report
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | --------------------------------------------------
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | PanDA job id: 6839475093
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | task id: 46676269
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | errors: (none)
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | pilot state: finished 
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | transexitcode: 0
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | exeerrorcode: 0
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | exeerrordiag: 
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | exitcode: 0
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | exitmsg: OK
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | cpuconsumptiontime: 41950 s
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | nevents: 400
[2025-10-12 12:47:21] 2025-10-12 16:46:31,356 | INFO     | neventsw: 0
[2025-10-12 12:47:21] 2025-10-12 16:46:31,357 | INFO     | pid: 3553915
[2025-10-12 12:47:21] 2025-10-12 16:46:31,357 | INFO     | pgrp: 3553915
[2025-10-12 12:47:21] 2025-10-12 16:46:31,357 | INFO     | corecount: 8
[2025-10-12 12:47:21] 2025-10-12 16:46:31,357 | INFO     | event service: False
[2025-10-12 12:47:21] 2025-10-12 16:46:31,357 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348941, 14: 2348941, 25: 2348969, 28: 2349387, 36: 2349415, 11936: 2378957, 11945: 2387955, 11948: 2388011, 11979: 
[2025-10-12 12:47:21] 2025-10-12 16:46:31,357 | INFO     | --------------------------------------------------
[2025-10-12 12:47:21] 2025-10-12 16:46:31,357 | INFO     | 
[2025-10-12 12:47:21] 2025-10-12 16:46:31,357 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 12:47:21] 2025-10-12 16:46:31,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,541 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,541 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,541 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,542 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:47:21] 2025-10-12 16:46:31,543 | INFO     | job 6839475093 has completed (purged errors)
[2025-10-12 12:47:21] 2025-10-12 16:46:31,543 | INFO     | overall cleanup function is called
[2025-10-12 12:47:21] 2025-10-12 16:46:32,552 | INFO     | --- collectZombieJob: --- 10, [3553915]
[2025-10-12 12:47:21] 2025-10-12 16:46:32,552 | INFO     | zombie collector waiting for pid 3553915
[2025-10-12 12:47:21] 2025-10-12 16:46:32,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:47:21] 2025-10-12 16:46:32,552 | INFO     | collected zombie processes
[2025-10-12 12:47:21] 2025-10-12 16:46:32,552 | INFO     | will attempt to kill all subprocesses of pid=3553915
[2025-10-12 12:47:21] 2025-10-12 16:46:33,479 | INFO     | process IDs to be killed: [3553915] (in reverse order)
[2025-10-12 12:47:21] 2025-10-12 16:46:33,898 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:47:21] 2025-10-12 16:46:33,903 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:47:21] 2025-10-12 16:46:34,012 | INFO     | did not find any defunct processes belonging to 3553915
[2025-10-12 12:47:21] 2025-10-12 16:46:34,132 | INFO     | did not find any defunct processes belonging to 3553915
[2025-10-12 12:47:21] 2025-10-12 16:46:34,132 | INFO     | ready for new job
[2025-10-12 12:47:21] 2025-10-12 16:46:34,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:47:21] 2025-10-12 16:46:34,159 | INFO     | ***************************************
[2025-10-12 12:47:21] 2025-10-12 16:46:34,159 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:47:21] 2025-10-12 16:46:34,159 | INFO     | ***************************************
[2025-10-12 12:47:21] 2025-10-12 16:46:34,159 | INFO     | 
[2025-10-12 12:47:21] 2025-10-12 16:46:34,180 | INFO     | architecture information:
[2025-10-12 12:47:21] 2025-10-12 16:46:34,181 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:47:21] 2025-10-12 16:46:34,303 | INFO     | cat /etc/os-release:
[2025-10-12 12:47:21] NAME="CentOS Linux"
[2025-10-12 12:47:21] VERSION="7 (Core)"
[2025-10-12 12:47:21] ID="centos"
[2025-10-12 12:47:21] ID_LIKE="rhel fedora"
[2025-10-12 12:47:21] VERSION_ID="7"
[2025-10-12 12:47:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:47:21] ANSI_COLOR="0;31"
[2025-10-12 12:47:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:47:21] HOME_URL="https://www.centos.org/"
[2025-10-12 12:47:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:47:21] 
[2025-10-12 12:47:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:47:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:47:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:47:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:47:21] 
[2025-10-12 12:47:21] 2025-10-12 16:46:34,303 | INFO     | ***************************************
[2025-10-12 12:47:21] 2025-10-12 16:46:34,807 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 12:47:21] 2025-10-12 16:46:34,860 | INFO     | sufficient remaining disk space (75388420096 B)
[2025-10-12 12:47:21] 2025-10-12 16:46:34,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:47:21] 2025-10-12 16:46:34,860 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:47:21] 2025-10-12 16:46:34,861 | INFO     | update_server=False
[2025-10-12 12:47:21] 2025-10-12 16:46:34,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:47:21] 2025-10-12 16:46:34,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:47:21] 2025-10-12 16:46:35,139 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 12:47:21] 2025-10-12 16:46:35,139 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 12:47:21] 2025-10-12 16:46:35,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:47:21] 2025-10-12 16:46:35,139 | INFO     | will abort loop
[2025-10-12 12:47:21] 2025-10-12 16:46:35,171 | INFO     | all payload control threads have been joined
[2025-10-12 12:47:21] 2025-10-12 16:46:35,483 | INFO     | all job control threads have been joined
[2025-10-12 12:47:21] 2025-10-12 16:46:35,552 | INFO     | all data control threads have been joined
[2025-10-12 12:47:21] 2025-10-12 16:46:35,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:47:21] 2025-10-12 16:46:35,867 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:35,974 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:36,145 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:36,177 | INFO     | [payload] control thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:36,264 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:36,300 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:36,300 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:36,373 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:47:21] 2025-10-12 16:46:36,489 | INFO     | [job] control thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:36,558 | INFO     | [data] control thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:36,627 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:36,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:36,819 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:37,232 | INFO     | [job] validate thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:37,379 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:37,831 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:46:38,879 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:47:21] 2025-10-12 16:47:03,679 | INFO     | PID=3545784 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:47:21] 2025-10-12 16:47:03,679 | INFO     | .. there are 38 such processes running
[2025-10-12 12:47:21] 2025-10-12 16:47:03,680 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:47:21] 2025-10-12 16:47:03,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:47:21] 2025-10-12 16:47:03,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:47:21] 2025-10-12 16:47:12,537 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:47:21] 2025-10-12 16:47:14,273 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140155444901696)>', '<ExcThread(monitor, started 140154941449984)>']
[2025-10-12 12:47:21] 2025-10-12 16:47:14,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:47:21] 2025-10-12 16:47:14,758 | INFO     | [monitor] control thread has ended
[2025-10-12 12:47:21] 2025-10-12 16:47:19,299 | INFO     | all workflow threads have been joined
[2025-10-12 12:47:21] 2025-10-12 16:47:19,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:47:21] 2025-10-12 16:47:19,319 | INFO     | traces error code: 0
[2025-10-12 12:47:21] 2025-10-12 16:47:19,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:47:21] 2025-10-12 16:47:20,679 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:47:21] 2025-10-12 16:47:20,712 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:47:21] 2025-10-12 16:47:20,755 [wrapper] pilotpid: 3545784
[2025-10-12 12:47:21] 2025-10-12 16:47:20,772 [wrapper] Pilot exit status: 0
[2025-10-12 12:47:21] 2025-10-12 16:47:20,876 [wrapper] pandaids: 6839475093
[2025-10-12 12:47:21] 2025-10-12 16:47:21,342 [wrapper] cleanup supervisor_pilot   75357 3545785
[2025-10-12 12:47:21] 2025-10-12 16:47:21,355 [wrapper] Test setup, not cleaning
[2025-10-12 12:47:21] 2025-10-12 16:47:21,404 [wrapper] apfmon messages muted
[2025-10-12 12:47:21] 2025-10-12 16:47:21,443 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:47:21] 2025-10-12 16:47:21,457 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:47:21]  *** Error codes and diagnostics ***
[2025-10-12 12:47:21]     "exeErrorCode": 0,
[2025-10-12 12:47:21]     "exeErrorDiag": "",
[2025-10-12 12:47:21]     "pilotErrorCode": 0,
[2025-10-12 12:47:21]     "pilotErrorDiag": "",
[2025-10-12 12:47:21]  *** Listing of results directory ***
[2025-10-12 12:47:21] total 413856
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 01:17 queuedata.json
[2025-10-12 12:47:21] -rwx------. 1 boincer umatlas     36292 Oct 12 01:18 runpilot2-wrapper.sh
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas       100 Oct 12 09:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:47:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 09:24 run_atlas
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas       105 Oct 12 09:24 job.xml
[2025-10-12 12:47:21] -rw-r--r--. 2 boincer umatlas 220303957 Oct 12 09:24 EVNT.46676267._004318.pool.root.1
[2025-10-12 12:47:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 09:24 start_atlas.sh
[2025-10-12 12:47:21] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 09:24 shared
[2025-10-12 12:47:21] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 09:24 input.tar.gz
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas         0 Oct 12 09:24 boinc_lockfile
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 09:25 pandaJob.out
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas    975528 Oct 12 09:25 agis_schedconf.cvmfs.json
[2025-10-12 12:47:21] drwx------. 5 boincer umatlas      4096 Oct 12 09:25 pilot3
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas       531 Oct 12 12:44 boinc_task_state.xml
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas 195682833 Oct 12 12:44 HITS.46676269._071827.pool.root.1
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas      1043 Oct 12 12:45 memory_monitor_summary.json
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:45 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas    416118 Oct 12 12:45 log.46676269._071827.job.log.tgz.1
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas      6856 Oct 12 12:46 init_data.xml
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas      7828 Oct 12 12:46 heartbeat.json
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas        95 Oct 12 12:47 pilot_heartbeat.json
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas        28 Oct 12 12:47 wrapper_checkpoint.txt
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas      5010 Oct 12 12:47 pilotlog.txt
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:47 boinc_mmap_file
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas   1531923 Oct 12 12:47 log.46676269._071827.job.log.1
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas       357 Oct 12 12:47 output.list
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:47 runtime_log
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas   1966080 Oct 12 12:47 result.tar.gz
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas       655 Oct 12 12:47 UEkKDm1e3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqhiNDmwBLELn.diag
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 12:47 runtime_log.err
[2025-10-12 12:47:21] -rw-r--r--. 1 boincer umatlas     20790 Oct 12 12:47 stderr.txt
[2025-10-12 12:47:21] HITS file was successfully produced:
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas 195682833 Oct 12 12:44 shared/HITS.pool.root.1
[2025-10-12 12:47:21]  *** Contents of shared directory: ***
[2025-10-12 12:47:21] total 408744
[2025-10-12 12:47:21] -rw-r--r--. 2 boincer umatlas 220303957 Oct 12 09:24 ATLAS.root_0
[2025-10-12 12:47:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 09:24 start_atlas.sh
[2025-10-12 12:47:21] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 09:24 input.tar.gz
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas 195682833 Oct 12 12:44 HITS.pool.root.1
[2025-10-12 12:47:21] -rw-------. 1 boincer umatlas   1966080 Oct 12 12:47 result.tar.gz
12:47:23 (3539849): run_atlas exited; CPU time 42299.984258
12:47:23 (3539849): called boinc_finish(0)

</stderr_txt>
]]>

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