Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:28:07 (1098626): wrapper (7.7.26015): starting
06:28:07 (1098626): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 06:28:07] Arguments: --nthreads 8
[2025-10-12 06:28:07] Threads: 8
[2025-10-12 06:28:07] Checking for CVMFS
[2025-10-12 06:28:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:28:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:28:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:28:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:28:07] 2.10.1.0 4440 186951 162500 151617 3 188 16527052 18432001 2797 130560 2 224708148 99.991 7135023 5569 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 06:28:07] CVMFS is ok
[2025-10-12 06:28:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:28:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:28:07] Further information can be found at the LHC@home message board.
[2025-10-12 06:28:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:28:07] Checking for apptainer binary...
[2025-10-12 06:28:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:28:07] Running /usr/bin/apptainer --version
[2025-10-12 06:28:07] apptainer version 1.1.9-1.el8
[2025-10-12 06:28:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:28:08] c-16-31.aglt2.org
[2025-10-12 06:28:08] apptainer works
[2025-10-12 06:28:08] Set ATHENA_PROC_NUMBER=8
[2025-10-12 06:28:08] Set ATHENA_CORE_NUMBER=8
[2025-10-12 06:28:08] Starting ATLAS job with PandaID=6838852993
[2025-10-12 06:28:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:23:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:23:40] 2025-10-12 13:22:37,471 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:23:40] 2025-10-12 13:22:37,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:23:40] 2025-10-12 13:22:37,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:23:40] 2025-10-12 13:22:37,477 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:23:40] 2025-10-12 13:22:37,478 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,479 | INFO     | sum of deviations: 19304427830.000008
[2025-10-12 09:23:40] 2025-10-12 13:22:37,479 | INFO     | mean x: 1760270103.0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,479 | INFO     | mean y: 2511808.0409356724
[2025-10-12 09:23:40] 2025-10-12 13:22:37,479 | INFO     | -- intersect: -21914651525.764576
[2025-10-12 09:23:40] 2025-10-12 13:22:37,480 | INFO     | intersect: -21914651525.764576
[2025-10-12 09:23:40] 2025-10-12 13:22:37,480 | INFO     | chi2: 1.1818256605806048
[2025-10-12 09:23:40] 2025-10-12 13:22:37,480 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 09:23:40] 2025-10-12 13:22:37,482 | INFO     | sum of deviations: 18638834443.000004
[2025-10-12 09:23:40] 2025-10-12 13:22:37,482 | INFO     | mean x: 1760269950.5
[2025-10-12 09:23:40] 2025-10-12 13:22:37,482 | INFO     | mean y: 2511039.1325301207
[2025-10-12 09:23:40] 2025-10-12 13:22:37,482 | INFO     | -- intersect: -23129377906.54515
[2025-10-12 09:23:40] 2025-10-12 13:22:37,482 | INFO     | intersect: -23129377906.54515
[2025-10-12 09:23:40] 2025-10-12 13:22:37,483 | INFO     | chi2: 1.1826586205874547
[2025-10-12 09:23:40] 2025-10-12 13:22:37,483 | INFO     | current chi2=1.1826586205874547 (change=-0.0704807853334936 %)
[2025-10-12 09:23:40] 2025-10-12 13:22:37,483 | INFO     | right removable region: 165
[2025-10-12 09:23:40] 2025-10-12 13:22:37,483 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 09:23:40] 2025-10-12 13:22:37,485 | INFO     | sum of deviations: -2383454646.9999995
[2025-10-12 09:23:40] 2025-10-12 13:22:37,485 | INFO     | mean x: 1760270255.5
[2025-10-12 09:23:40] 2025-10-12 13:22:37,485 | INFO     | mean y: 2536508.493975904
[2025-10-12 09:23:40] 2025-10-12 13:22:37,485 | INFO     | -- intersect: 2960544313.276133
[2025-10-12 09:23:40] 2025-10-12 13:22:37,485 | INFO     | intersect: 2960544313.276133
[2025-10-12 09:23:40] 2025-10-12 13:22:37,486 | INFO     | chi2: 0.025224902992857297
[2025-10-12 09:23:40] 2025-10-12 13:22:37,486 | INFO     | current chi2=0.025224902992857297 (change=97.86559863825728 %)
[2025-10-12 09:23:40] 2025-10-12 13:22:37,486 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,487 | INFO     | sum of deviations: -3895181474.0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,488 | INFO     | mean x: 1760270408.0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,488 | INFO     | mean y: 2538318.4782608696
[2025-10-12 09:23:40] 2025-10-12 13:22:37,488 | INFO     | -- intersect: 5301219473.1938305
[2025-10-12 09:23:40] 2025-10-12 13:22:37,488 | INFO     | intersect: 5301219473.1938305
[2025-10-12 09:23:40] 2025-10-12 13:22:37,489 | INFO     | chi2: 0.012069427923575014
[2025-10-12 09:23:40] 2025-10-12 13:22:37,489 | INFO     | current chi2=0.012069427923575014 (change=52.15272809178849 %)
[2025-10-12 09:23:40] 2025-10-12 13:22:37,489 | INFO     | sum of square deviations: 1177156955.0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,490 | INFO     | sum of deviations: -3361791557.000001
[2025-10-12 09:23:40] 2025-10-12 13:22:37,490 | INFO     | mean x: 1760270560.5
[2025-10-12 09:23:40] 2025-10-12 13:22:37,491 | INFO     | mean y: 2537618.1153846155
[2025-10-12 09:23:40] 2025-10-12 13:22:37,491 | INFO     | -- intersect: 5029618062.391874
[2025-10-12 09:23:40] 2025-10-12 13:22:37,491 | INFO     | intersect: 5029618062.391874
[2025-10-12 09:23:40] 2025-10-12 13:22:37,491 | INFO     | chi2: 0.0119805261313395
[2025-10-12 09:23:40] 2025-10-12 13:22:37,491 | INFO     | current chi2=0.0119805261313395 (change=0.7365866286161211 %)
[2025-10-12 09:23:40] 2025-10-12 13:22:37,492 | INFO     | left removable region: 30
[2025-10-12 09:23:40] 2025-10-12 13:22:37,492 | INFO     | sum of square deviations: 762879420.0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,493 | INFO     | sum of deviations: -207990175.0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,493 | INFO     | mean x: 1760270835.0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,493 | INFO     | mean y: 2532476.3185185185
[2025-10-12 09:23:40] 2025-10-12 13:22:37,493 | INFO     | -- intersect: 482449786.2114059
[2025-10-12 09:23:40] 2025-10-12 13:22:37,494 | INFO     | intersect: 482449786.2114059
[2025-10-12 09:23:40] 2025-10-12 13:22:37,494 | INFO     | chi2: 0.007897110397800212
[2025-10-12 09:23:40] 2025-10-12 13:22:37,494 | INFO     | -- intersect: 482449786.2114059
[2025-10-12 09:23:40] 2025-10-12 13:22:37,494 | INFO     | current memory leak: -0.27 B/s (using 135 data points, chi2=0.01)
[2025-10-12 09:23:40] 2025-10-12 13:22:37,495 | INFO     | could have reported an average CPU frequency of 3016 MHz (9 samples)
[2025-10-12 09:23:40] 2025-10-12 13:22:37,495 | INFO     | ..............................
[2025-10-12 09:23:40] 2025-10-12 13:22:37,495 | INFO     | . Timing measurements:
[2025-10-12 09:23:40] 2025-10-12 13:22:37,495 | INFO     | . get job = 0 s
[2025-10-12 09:23:40] 2025-10-12 13:22:37,495 | INFO     | . initial setup = 2 s
[2025-10-12 09:23:40] 2025-10-12 13:22:37,496 | INFO     | . payload setup = 4 s
[2025-10-12 09:23:40] 2025-10-12 13:22:37,496 | INFO     | . stage-in = 0 s
[2025-10-12 09:23:40] 2025-10-12 13:22:37,496 | INFO     | . payload execution = 10429 s
[2025-10-12 09:23:40] 2025-10-12 13:22:37,496 | INFO     | . stage-out = 0 s
[2025-10-12 09:23:40] 2025-10-12 13:22:37,496 | INFO     | . log creation = 0 s
[2025-10-12 09:23:40] 2025-10-12 13:22:37,496 | INFO     | ..............................
[2025-10-12 09:23:40] 2025-10-12 13:22:37,579 | INFO     | 
[2025-10-12 09:23:40] 2025-10-12 13:22:37,580 | INFO     | job summary report
[2025-10-12 09:23:40] 2025-10-12 13:22:37,580 | INFO     | --------------------------------------------------
[2025-10-12 09:23:40] 2025-10-12 13:22:37,580 | INFO     | PanDA job id: 6838852993
[2025-10-12 09:23:40] 2025-10-12 13:22:37,580 | INFO     | task id: 46676269
[2025-10-12 09:23:40] 2025-10-12 13:22:37,580 | INFO     | errors: (none)
[2025-10-12 09:23:40] 2025-10-12 13:22:37,581 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:23:40] 2025-10-12 13:22:37,581 | INFO     | pilot state: finished 
[2025-10-12 09:23:40] 2025-10-12 13:22:37,581 | INFO     | transexitcode: 0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,581 | INFO     | exeerrorcode: 0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,581 | INFO     | exeerrordiag: 
[2025-10-12 09:23:40] 2025-10-12 13:22:37,581 | INFO     | exitcode: 0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,582 | INFO     | exitmsg: OK
[2025-10-12 09:23:40] 2025-10-12 13:22:37,582 | INFO     | cpuconsumptiontime: 78089 s
[2025-10-12 09:23:40] 2025-10-12 13:22:37,582 | INFO     | nevents: 400
[2025-10-12 09:23:40] 2025-10-12 13:22:37,582 | INFO     | neventsw: 0
[2025-10-12 09:23:40] 2025-10-12 13:22:37,582 | INFO     | pid: 1133799
[2025-10-12 09:23:40] 2025-10-12 13:22:37,582 | INFO     | pgrp: 1133799
[2025-10-12 09:23:40] 2025-10-12 13:22:37,582 | INFO     | corecount: 8
[2025-10-12 09:23:40] 2025-10-12 13:22:37,583 | INFO     | event service: False
[2025-10-12 09:23:40] 2025-10-12 13:22:37,583 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 10436: 2377932, 10437: 2377931, 10440: 2386985, 10441: 2387169, 10446: 2387427}
[2025-10-12 09:23:40] 2025-10-12 13:22:37,583 | INFO     | --------------------------------------------------
[2025-10-12 09:23:40] 2025-10-12 13:22:37,583 | INFO     | 
[2025-10-12 09:23:40] 2025-10-12 13:22:37,583 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 09:23:40] 2025-10-12 13:22:37,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,600 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,600 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,601 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,601 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,601 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,601 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,601 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,602 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,602 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:23:40] 2025-10-12 13:22:37,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,603 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:23:40] 2025-10-12 13:22:37,603 | INFO     | job 6838852993 has completed (purged errors)
[2025-10-12 09:23:40] 2025-10-12 13:22:37,603 | INFO     | overall cleanup function is called
[2025-10-12 09:23:40] 2025-10-12 13:22:38,612 | INFO     | --- collectZombieJob: --- 10, [1133799]
[2025-10-12 09:23:40] 2025-10-12 13:22:38,612 | INFO     | zombie collector waiting for pid 1133799
[2025-10-12 09:23:40] 2025-10-12 13:22:38,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:23:40] 2025-10-12 13:22:38,613 | INFO     | collected zombie processes
[2025-10-12 09:23:40] 2025-10-12 13:22:38,613 | INFO     | will attempt to kill all subprocesses of pid=1133799
[2025-10-12 09:23:40] 2025-10-12 13:22:38,909 | INFO     | process IDs to be killed: [1133799] (in reverse order)
[2025-10-12 09:23:40] 2025-10-12 13:22:38,983 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:23:40] 2025-10-12 13:22:38,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:23:40] 2025-10-12 13:22:38,995 | INFO     | did not find any defunct processes belonging to 1133799
[2025-10-12 09:23:40] 2025-10-12 13:22:39,001 | INFO     | did not find any defunct processes belonging to 1133799
[2025-10-12 09:23:40] 2025-10-12 13:22:39,001 | INFO     | ready for new job
[2025-10-12 09:23:40] 2025-10-12 13:22:39,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:23:40] 2025-10-12 13:22:39,003 | INFO     | ***************************************
[2025-10-12 09:23:40] 2025-10-12 13:22:39,003 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:23:40] 2025-10-12 13:22:39,003 | INFO     | ***************************************
[2025-10-12 09:23:40] 2025-10-12 13:22:39,003 | INFO     | 
[2025-10-12 09:23:40] 2025-10-12 13:22:39,017 | INFO     | architecture information:
[2025-10-12 09:23:40] 2025-10-12 13:22:39,017 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:23:40] 2025-10-12 13:22:39,028 | INFO     | cat /etc/os-release:
[2025-10-12 09:23:40] NAME="CentOS Linux"
[2025-10-12 09:23:40] VERSION="7 (Core)"
[2025-10-12 09:23:40] ID="centos"
[2025-10-12 09:23:40] ID_LIKE="rhel fedora"
[2025-10-12 09:23:40] VERSION_ID="7"
[2025-10-12 09:23:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:23:40] ANSI_COLOR="0;31"
[2025-10-12 09:23:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:23:40] HOME_URL="https://www.centos.org/"
[2025-10-12 09:23:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:23:40] 
[2025-10-12 09:23:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:23:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:23:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:23:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:23:40] 
[2025-10-12 09:23:40] 2025-10-12 13:22:39,029 | INFO     | ***************************************
[2025-10-12 09:23:40] 2025-10-12 13:22:39,532 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 09:23:40] 2025-10-12 13:22:39,545 | INFO     | sufficient remaining disk space (103513325568 B)
[2025-10-12 09:23:40] 2025-10-12 13:22:39,545 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:23:40] 2025-10-12 13:22:39,545 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:23:40] 2025-10-12 13:22:39,546 | INFO     | update_server=False
[2025-10-12 09:23:40] 2025-10-12 13:22:39,546 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:23:40] 2025-10-12 13:22:39,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:23:40] 2025-10-12 13:22:39,546 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:23:40] 2025-10-12 13:22:39,818 | INFO     | all job control threads have been joined
[2025-10-12 09:23:40] 2025-10-12 13:22:40,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:23:40] 2025-10-12 13:22:40,191 | INFO     | aborting loop
[2025-10-12 09:23:40] 2025-10-12 13:22:40,426 | INFO     | all data control threads have been joined
[2025-10-12 09:23:40] 2025-10-12 13:22:40,551 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:40,552 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:40,613 | INFO     | all payload control threads have been joined
[2025-10-12 09:23:40] 2025-10-12 13:22:40,759 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:40,823 | INFO     | [job] control thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:41,157 | INFO     | [job] validate thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:41,197 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:41,431 | INFO     | [data] control thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:41,548 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:41,618 | INFO     | [payload] control thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:41,622 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:41,793 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:41,819 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:41,843 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:41,844 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:42,125 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:22:42,993 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:23:40] 2025-10-12 13:22:46,998 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:23:40] 2025-10-12 13:23:09,086 | INFO     | PID=1109275 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:23:40] 2025-10-12 13:23:09,086 | INFO     | .. there are 5 such processes running
[2025-10-12 09:23:40] 2025-10-12 13:23:09,087 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:23:40] 2025-10-12 13:23:09,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:23:40] 2025-10-12 13:23:09,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:23:40] 2025-10-12 13:23:34,012 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:23:40] 2025-10-12 13:23:34,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139823244355392)>', '<ExcThread(monitor, started 139822584817408)>']
[2025-10-12 09:23:40] 2025-10-12 13:23:35,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:23:40] 2025-10-12 13:23:35,214 | INFO     | [monitor] control thread has ended
[2025-10-12 09:23:40] 2025-10-12 13:23:39,789 | INFO     | all workflow threads have been joined
[2025-10-12 09:23:40] 2025-10-12 13:23:39,789 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:23:40] 2025-10-12 13:23:39,790 | INFO     | traces error code: 0
[2025-10-12 09:23:40] 2025-10-12 13:23:39,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:23:40] 2025-10-12 13:23:39,917 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:23:40] 2025-10-12 13:23:39,920 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:23:40] 2025-10-12 13:23:39,922 [wrapper] pilotpid: 1109275
[2025-10-12 09:23:40] 2025-10-12 13:23:39,924 [wrapper] Pilot exit status: 0
[2025-10-12 09:23:40] 2025-10-12 13:23:39,933 [wrapper] pandaids: 6838852993
[2025-10-12 09:23:40] 2025-10-12 13:23:39,991 [wrapper] cleanup supervisor_pilot 3557892 1109276
[2025-10-12 09:23:40] 2025-10-12 13:23:39,994 [wrapper] Test setup, not cleaning
[2025-10-12 09:23:40] 2025-10-12 13:23:39,996 [wrapper] apfmon messages muted
[2025-10-12 09:23:40] 2025-10-12 13:23:39,999 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:23:40] 2025-10-12 13:23:40,001 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:23:40]  *** Error codes and diagnostics ***
[2025-10-12 09:23:40]     "exeErrorCode": 0,
[2025-10-12 09:23:40]     "exeErrorDiag": "",
[2025-10-12 09:23:40]     "pilotErrorCode": 0,
[2025-10-12 09:23:40]     "pilotErrorDiag": "",
[2025-10-12 09:23:40]  *** Listing of results directory ***
[2025-10-12 09:23:40] total 426876
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 16:36 pilot3.tar.gz
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 16:40 queuedata.json
[2025-10-12 09:23:40] -rwx------ 1 boincer umatlas     36292 Oct 11 16:42 runpilot2-wrapper.sh
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas       100 Oct 12 06:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:23:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 06:28 run_atlas
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas       105 Oct 12 06:28 job.xml
[2025-10-12 09:23:40] -rw-r--r-- 2 boincer umatlas 224037175 Oct 12 06:28 EVNT.46676267._002598.pool.root.1
[2025-10-12 09:23:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:28 start_atlas.sh
[2025-10-12 09:23:40] drwxrwx--x 2 boincer umatlas      4096 Oct 12 06:28 shared
[2025-10-12 09:23:40] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 06:28 input.tar.gz
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas         0 Oct 12 06:28 boinc_lockfile
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 06:28 pandaJob.out
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas    975520 Oct 12 06:28 agis_schedconf.cvmfs.json
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas   1560580 Oct 12 06:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:23:40] drwx------ 5 boincer umatlas      4096 Oct 12 06:28 pilot3
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas      6014 Oct 12 09:19 init_data.xml
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas 205382378 Oct 12 09:21 HITS.46676269._064629.pool.root.1
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas       530 Oct 12 09:22 boinc_task_state.xml
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas        95 Oct 12 09:22 pilot_heartbeat.json
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas      1049 Oct 12 09:22 memory_monitor_summary.json
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas    425570 Oct 12 09:22 log.46676269._064629.job.log.tgz.1
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas      7832 Oct 12 09:22 heartbeat.json
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 09:23 boinc_mmap_file
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas        28 Oct 12 09:23 wrapper_checkpoint.txt
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas      4824 Oct 12 09:23 pilotlog.txt
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas   1474414 Oct 12 09:23 log.46676269._064629.job.log.1
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas       357 Oct 12 09:23 output.list
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas       620 Oct 12 09:23 runtime_log
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas   1914880 Oct 12 09:23 result.tar.gz
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 09:23 runtime_log.err
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas       659 Oct 12 09:23 k1CNDmqavR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmOYSMDmctwRqm.diag
[2025-10-12 09:23:40] -rw-r--r-- 1 boincer umatlas     20915 Oct 12 09:23 stderr.txt
[2025-10-12 09:23:40] HITS file was successfully produced:
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas 205382378 Oct 12 09:21 shared/HITS.pool.root.1
[2025-10-12 09:23:40]  *** Contents of shared directory: ***
[2025-10-12 09:23:40] total 421816
[2025-10-12 09:23:40] -rw-r--r-- 2 boincer umatlas 224037175 Oct 12 06:28 ATLAS.root_0
[2025-10-12 09:23:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:28 start_atlas.sh
[2025-10-12 09:23:40] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 06:28 input.tar.gz
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas 205382378 Oct 12 09:21 HITS.pool.root.1
[2025-10-12 09:23:40] -rw------- 1 boincer umatlas   1914880 Oct 12 09:23 result.tar.gz
09:23:41 (1098626): run_atlas exited; CPU time 78451.936501
09:23:41 (1098626): called boinc_finish(0)

</stderr_txt>
]]>

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