Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:13:10 (13201): wrapper (7.7.26015): starting
06:13:10 (13201): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 06:13:10] Arguments: --nthreads 8
[2025-10-12 06:13:10] Threads: 8
[2025-10-12 06:13:10] Checking for CVMFS
[2025-10-12 06:13:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:13:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:13:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:13:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:13:11] 2.11.2.0 2756 8366 79772 151616 2 56 14408045 20275200 1 130560 0 5680476 99.990 279013 38607 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 06:13:11] CVMFS is ok
[2025-10-12 06:13:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:13:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:13:11] Further information can be found at the LHC@home message board.
[2025-10-12 06:13:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:13:11] Checking for apptainer binary...
[2025-10-12 06:13:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:13:11] Running /usr/bin/apptainer --version
[2025-10-12 06:13:11] apptainer version 1.3.2-1.el7
[2025-10-12 06:13:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:13:12] c-115-14.aglt2.org
[2025-10-12 06:13:12] apptainer works
[2025-10-12 06:13:12] Set ATHENA_PROC_NUMBER=8
[2025-10-12 06:13:12] Set ATHENA_CORE_NUMBER=8
[2025-10-12 06:13:12] Starting ATLAS job with PandaID=6839475169
[2025-10-12 06:13:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:05:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:05:46] 2025-10-12 12:04:39,145 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:05:46] 2025-10-12 12:04:39,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:05:46] 2025-10-12 12:04:39,145 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:05:46] 2025-10-12 12:04:39,145 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:05:46] 2025-10-12 12:04:39,148 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:05:46] 2025-10-12 12:04:39,149 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,149 | INFO     | sum of deviations: 15255623346.0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,149 | INFO     | mean x: 1760267333.0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,150 | INFO     | mean y: 2499215.018348624
[2025-10-12 08:05:46] 2025-10-12 12:04:39,150 | INFO     | -- intersect: -66876108679.89711
[2025-10-12 08:05:46] 2025-10-12 12:04:39,150 | INFO     | intersect: -66876108679.89711
[2025-10-12 08:05:46] 2025-10-12 12:04:39,150 | INFO     | chi2: 1.5700398243635263
[2025-10-12 08:05:46] 2025-10-12 12:04:39,151 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,151 | INFO     | sum of deviations: 14805403238.499998
[2025-10-12 08:05:46] 2025-10-12 12:04:39,151 | INFO     | mean x: 1760267180.5
[2025-10-12 08:05:46] 2025-10-12 12:04:39,151 | INFO     | mean y: 2497912.855769231
[2025-10-12 08:05:46] 2025-10-12 12:04:39,152 | INFO     | -- intersect: -74721576634.63945
[2025-10-12 08:05:46] 2025-10-12 12:04:39,152 | INFO     | intersect: -74721576634.63945
[2025-10-12 08:05:46] 2025-10-12 12:04:39,152 | INFO     | chi2: 1.5713574893497315
[2025-10-12 08:05:46] 2025-10-12 12:04:39,152 | INFO     | current chi2=1.5713574893497315 (change=-0.08392557728523792 %)
[2025-10-12 08:05:46] 2025-10-12 12:04:39,152 | INFO     | right removable region: 103
[2025-10-12 08:05:46] 2025-10-12 12:04:39,152 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,153 | INFO     | sum of deviations: -3097515614.5000005
[2025-10-12 08:05:46] 2025-10-12 12:04:39,153 | INFO     | mean x: 1760267485.5
[2025-10-12 08:05:46] 2025-10-12 12:04:39,153 | INFO     | mean y: 2551379.548076923
[2025-10-12 08:05:46] 2025-10-12 12:04:39,153 | INFO     | -- intersect: 15635967374.105005
[2025-10-12 08:05:46] 2025-10-12 12:04:39,153 | INFO     | intersect: 15635967374.105005
[2025-10-12 08:05:46] 2025-10-12 12:04:39,154 | INFO     | chi2: 0.034170350466743944
[2025-10-12 08:05:46] 2025-10-12 12:04:39,154 | INFO     | current chi2=0.034170350466743944 (change=97.82359976247125 %)
[2025-10-12 08:05:46] 2025-10-12 12:04:39,154 | INFO     | sum of square deviations: 300842850.0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,154 | INFO     | sum of deviations: -4628590147.0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,154 | INFO     | mean x: 1760267638.0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,155 | INFO     | mean y: 2556114.404040404
[2025-10-12 08:05:46] 2025-10-12 12:04:39,155 | INFO     | -- intersect: 27084992826.228046
[2025-10-12 08:05:46] 2025-10-12 12:04:39,155 | INFO     | intersect: 27084992826.228046
[2025-10-12 08:05:46] 2025-10-12 12:04:39,155 | INFO     | chi2: 0.008599950514561297
[2025-10-12 08:05:46] 2025-10-12 12:04:39,155 | INFO     | current chi2=0.008599950514561297 (change=74.8321266914393 %)
[2025-10-12 08:05:46] 2025-10-12 12:04:39,155 | INFO     | sum of square deviations: 257521107.5
[2025-10-12 08:05:46] 2025-10-12 12:04:39,156 | INFO     | sum of deviations: -4542246385.5
[2025-10-12 08:05:46] 2025-10-12 12:04:39,156 | INFO     | mean x: 1760267790.5
[2025-10-12 08:05:46] 2025-10-12 12:04:39,156 | INFO     | mean y: 2555803.138297872
[2025-10-12 08:05:46] 2025-10-12 12:04:39,156 | INFO     | -- intersect: 31050768070.207306
[2025-10-12 08:05:46] 2025-10-12 12:04:39,156 | INFO     | intersect: 31050768070.207306
[2025-10-12 08:05:46] 2025-10-12 12:04:39,156 | INFO     | chi2: 0.007217164651710181
[2025-10-12 08:05:46] 2025-10-12 12:04:39,157 | INFO     | current chi2=0.007217164651710181 (change=16.078997902485657 %)
[2025-10-12 08:05:46] 2025-10-12 12:04:39,157 | INFO     | left removable region: 30
[2025-10-12 08:05:46] 2025-10-12 12:04:39,157 | INFO     | sum of square deviations: 120605052.0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,157 | INFO     | sum of deviations: -2826221926.9999995
[2025-10-12 08:05:46] 2025-10-12 12:04:39,157 | INFO     | mean x: 1760268065.0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,157 | INFO     | mean y: 2551460.191780822
[2025-10-12 08:05:46] 2025-10-12 12:04:39,157 | INFO     | -- intersect: 41252135289.407
[2025-10-12 08:05:46] 2025-10-12 12:04:39,158 | INFO     | intersect: 41252135289.407
[2025-10-12 08:05:46] 2025-10-12 12:04:39,158 | INFO     | chi2: 0.0056588906342235415
[2025-10-12 08:05:46] 2025-10-12 12:04:39,158 | INFO     | -- intersect: 41252135289.407
[2025-10-12 08:05:46] 2025-10-12 12:04:39,158 | INFO     | current memory leak: -23.43 B/s (using 73 data points, chi2=0.01)
[2025-10-12 08:05:46] 2025-10-12 12:04:39,158 | INFO     | could have reported an average CPU frequency of 2078 MHz (7 samples)
[2025-10-12 08:05:46] 2025-10-12 12:04:39,159 | INFO     | ..............................
[2025-10-12 08:05:46] 2025-10-12 12:04:39,159 | INFO     | . Timing measurements:
[2025-10-12 08:05:46] 2025-10-12 12:04:39,159 | INFO     | . get job = 0 s
[2025-10-12 08:05:46] 2025-10-12 12:04:39,159 | INFO     | . initial setup = 2 s
[2025-10-12 08:05:46] 2025-10-12 12:04:39,159 | INFO     | . payload setup = 7 s
[2025-10-12 08:05:46] 2025-10-12 12:04:39,159 | INFO     | . stage-in = 0 s
[2025-10-12 08:05:46] 2025-10-12 12:04:39,159 | INFO     | . payload execution = 6630 s
[2025-10-12 08:05:46] 2025-10-12 12:04:39,159 | INFO     | . stage-out = 1 s
[2025-10-12 08:05:46] 2025-10-12 12:04:39,159 | INFO     | . log creation = 0 s
[2025-10-12 08:05:46] 2025-10-12 12:04:39,160 | INFO     | ..............................
[2025-10-12 08:05:46] 2025-10-12 12:04:39,269 | INFO     | 
[2025-10-12 08:05:46] 2025-10-12 12:04:39,269 | INFO     | job summary report
[2025-10-12 08:05:46] 2025-10-12 12:04:39,269 | INFO     | --------------------------------------------------
[2025-10-12 08:05:46] 2025-10-12 12:04:39,269 | INFO     | PanDA job id: 6839475169
[2025-10-12 08:05:46] 2025-10-12 12:04:39,270 | INFO     | task id: 46676269
[2025-10-12 08:05:46] 2025-10-12 12:04:39,270 | INFO     | errors: (none)
[2025-10-12 08:05:46] 2025-10-12 12:04:39,270 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:05:46] 2025-10-12 12:04:39,270 | INFO     | pilot state: finished 
[2025-10-12 08:05:46] 2025-10-12 12:04:39,270 | INFO     | transexitcode: 0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,271 | INFO     | exeerrorcode: 0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,271 | INFO     | exeerrordiag: 
[2025-10-12 08:05:46] 2025-10-12 12:04:39,271 | INFO     | exitcode: 0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,271 | INFO     | exitmsg: OK
[2025-10-12 08:05:46] 2025-10-12 12:04:39,271 | INFO     | cpuconsumptiontime: 48940 s
[2025-10-12 08:05:46] 2025-10-12 12:04:39,271 | INFO     | nevents: 400
[2025-10-12 08:05:46] 2025-10-12 12:04:39,271 | INFO     | neventsw: 0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,271 | INFO     | pid: 23316
[2025-10-12 08:05:46] 2025-10-12 12:04:39,272 | INFO     | pgrp: 23316
[2025-10-12 08:05:46] 2025-10-12 12:04:39,272 | INFO     | corecount: 8
[2025-10-12 08:05:46] 2025-10-12 12:04:39,272 | INFO     | event service: False
[2025-10-12 08:05:46] 2025-10-12 12:04:39,272 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 6643: 2376257, 6644: 2385255, 6647: 2385311, 6653: 2385633}
[2025-10-12 08:05:46] 2025-10-12 12:04:39,272 | INFO     | --------------------------------------------------
[2025-10-12 08:05:46] 2025-10-12 12:04:39,272 | INFO     | 
[2025-10-12 08:05:46] 2025-10-12 12:04:39,272 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 08:05:46] 2025-10-12 12:04:39,336 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,336 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,337 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,338 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,338 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,338 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,339 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,339 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,339 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,339 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,339 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,340 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,340 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:05:46] 2025-10-12 12:04:39,340 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,340 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:05:46] 2025-10-12 12:04:39,341 | INFO     | job 6839475169 has completed (purged errors)
[2025-10-12 08:05:46] 2025-10-12 12:04:39,341 | INFO     | overall cleanup function is called
[2025-10-12 08:05:46] 2025-10-12 12:04:40,349 | INFO     | --- collectZombieJob: --- 10, [23316]
[2025-10-12 08:05:46] 2025-10-12 12:04:40,350 | INFO     | zombie collector waiting for pid 23316
[2025-10-12 08:05:46] 2025-10-12 12:04:40,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:05:46] 2025-10-12 12:04:40,350 | INFO     | collected zombie processes
[2025-10-12 08:05:46] 2025-10-12 12:04:40,350 | INFO     | will attempt to kill all subprocesses of pid=23316
[2025-10-12 08:05:46] 2025-10-12 12:04:40,438 | INFO     | process IDs to be killed: [23316] (in reverse order)
[2025-10-12 08:05:46] 2025-10-12 12:04:40,489 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:05:46] 2025-10-12 12:04:40,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:05:46] 2025-10-12 12:04:40,493 | INFO     | did not find any defunct processes belonging to 23316
[2025-10-12 08:05:46] 2025-10-12 12:04:40,496 | INFO     | did not find any defunct processes belonging to 23316
[2025-10-12 08:05:46] 2025-10-12 12:04:40,496 | INFO     | ready for new job
[2025-10-12 08:05:46] 2025-10-12 12:04:40,496 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:05:46] 2025-10-12 12:04:40,498 | INFO     | ***************************************
[2025-10-12 08:05:46] 2025-10-12 12:04:40,498 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:05:46] 2025-10-12 12:04:40,498 | INFO     | ***************************************
[2025-10-12 08:05:46] 2025-10-12 12:04:40,498 | INFO     | 
[2025-10-12 08:05:46] 2025-10-12 12:04:40,499 | INFO     | architecture information:
[2025-10-12 08:05:46] 2025-10-12 12:04:40,499 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:05:46] 2025-10-12 12:04:40,518 | INFO     | cat /etc/os-release:
[2025-10-12 08:05:46] NAME="CentOS Linux"
[2025-10-12 08:05:46] VERSION="7 (Core)"
[2025-10-12 08:05:46] ID="centos"
[2025-10-12 08:05:46] ID_LIKE="rhel fedora"
[2025-10-12 08:05:46] VERSION_ID="7"
[2025-10-12 08:05:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:05:46] ANSI_COLOR="0;31"
[2025-10-12 08:05:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:05:46] HOME_URL="https://www.centos.org/"
[2025-10-12 08:05:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:05:46] 
[2025-10-12 08:05:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:05:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:05:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:05:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:05:46] 
[2025-10-12 08:05:46] 2025-10-12 12:04:40,518 | INFO     | ***************************************
[2025-10-12 08:05:46] 2025-10-12 12:04:41,022 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 08:05:46] 2025-10-12 12:04:41,041 | INFO     | sufficient remaining disk space (18592301056 B)
[2025-10-12 08:05:46] 2025-10-12 12:04:41,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:05:46] 2025-10-12 12:04:41,042 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:05:46] 2025-10-12 12:04:41,043 | INFO     | update_server=False
[2025-10-12 08:05:46] 2025-10-12 12:04:41,043 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:05:46] 2025-10-12 12:04:41,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:05:46] 2025-10-12 12:04:41,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:05:46] 2025-10-12 12:04:41,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:05:46] 2025-10-12 12:04:41,045 | INFO     | aborting loop
[2025-10-12 08:05:46] 2025-10-12 12:04:41,089 | INFO     | all payload control threads have been joined
[2025-10-12 08:05:46] 2025-10-12 12:04:41,477 | INFO     | all data control threads have been joined
[2025-10-12 08:05:46] 2025-10-12 12:04:41,492 | INFO     | all job control threads have been joined
[2025-10-12 08:05:46] 2025-10-12 12:04:42,049 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:42,049 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:42,050 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:42,090 | INFO     | [payload] control thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:42,159 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:42,346 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:42,483 | INFO     | [data] control thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:42,494 | INFO     | [job] control thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:42,860 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:42,880 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:42,895 | INFO     | [job] validate thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:42,967 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:43,046 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:43,274 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:43,320 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:04:43,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:05:46] 2025-10-12 12:04:47,567 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:05:46] 2025-10-12 12:05:11,917 | INFO     | PID=16871 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 08:05:46] 2025-10-12 12:05:11,918 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:05:46] 2025-10-12 12:05:11,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:05:46] 2025-10-12 12:05:11,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:05:46] 2025-10-12 12:05:39,711 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:05:46] 2025-10-12 12:05:41,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785093334848)>', '<ExcThread(monitor, started 139784626345728)>']
[2025-10-12 08:05:46] 2025-10-12 12:05:42,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:05:46] 2025-10-12 12:05:42,065 | INFO     | [monitor] control thread has ended
[2025-10-12 08:05:46] 2025-10-12 12:05:46,640 | INFO     | all workflow threads have been joined
[2025-10-12 08:05:46] 2025-10-12 12:05:46,640 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:05:46] 2025-10-12 12:05:46,641 | INFO     | traces error code: 0
[2025-10-12 08:05:46] 2025-10-12 12:05:46,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:05:46] 2025-10-12 12:05:46,742 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:05:46] 2025-10-12 12:05:46,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:05:46] 2025-10-12 12:05:46,751 [wrapper] pilotpid: 16871
[2025-10-12 08:05:46] 2025-10-12 12:05:46,755 [wrapper] Pilot exit status: 0
[2025-10-12 08:05:46] 2025-10-12 12:05:46,775 [wrapper] pandaids: 6839475169
[2025-10-12 08:05:46] 2025-10-12 12:05:46,824 [wrapper] cleanup supervisor_pilot 32655 16872
[2025-10-12 08:05:46] 2025-10-12 12:05:46,829 [wrapper] Test setup, not cleaning
[2025-10-12 08:05:46] 2025-10-12 12:05:46,834 [wrapper] apfmon messages muted
[2025-10-12 08:05:46] 2025-10-12 12:05:46,839 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:05:46] 2025-10-12 12:05:46,843 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:05:46]  *** Error codes and diagnostics ***
[2025-10-12 08:05:46]     "exeErrorCode": 0,
[2025-10-12 08:05:46]     "exeErrorDiag": "",
[2025-10-12 08:05:46]     "pilotErrorCode": 0,
[2025-10-12 08:05:46]     "pilotErrorDiag": "",
[2025-10-12 08:05:46]  *** Listing of results directory ***
[2025-10-12 08:05:46] total 409792
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 01:26 queuedata.json
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 01:26 pilot3.tar.gz
[2025-10-12 08:05:46] -rwx------ 1 boincer umatlas     36292 Oct 12 01:27 runpilot2-wrapper.sh
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas       100 Oct 12 06:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:05:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 06:13 run_atlas
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas       105 Oct 12 06:13 job.xml
[2025-10-12 08:05:46] -rw-r--r-- 2 boincer umatlas 220517988 Oct 12 06:13 EVNT.46676267._004321.pool.root.1
[2025-10-12 08:05:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:13 start_atlas.sh
[2025-10-12 08:05:46] drwxrwx--x 2 boincer umatlas      4096 Oct 12 06:13 shared
[2025-10-12 08:05:46] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 06:13 input.tar.gz
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas         0 Oct 12 06:13 boinc_lockfile
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 06:13 pandaJob.out
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas    975536 Oct 12 06:13 agis_schedconf.cvmfs.json
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas   1560580 Oct 12 06:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:05:46] drwx------ 5 boincer umatlas      4096 Oct 12 06:13 pilot3
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 08:03 init_data.xml
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas 192628915 Oct 12 08:03 HITS.46676269._071903.pool.root.1
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas       529 Oct 12 08:04 boinc_task_state.xml
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas      1063 Oct 12 08:04 memory_monitor_summary.json
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas    345809 Oct 12 08:04 log.46676269._071903.job.log.tgz.1
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas      7850 Oct 12 08:04 heartbeat.json
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas        95 Oct 12 08:05 pilot_heartbeat.json
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 08:05 boinc_mmap_file
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas        27 Oct 12 08:05 wrapper_checkpoint.txt
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas      4746 Oct 12 08:05 pilotlog.txt
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas    945710 Oct 12 08:05 log.46676269._071903.job.log.1
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas       357 Oct 12 08:05 output.list
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas       620 Oct 12 08:05 runtime_log
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas   1310720 Oct 12 08:05 result.tar.gz
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 08:05 runtime_log.err
[2025-10-12 08:05:46] -rw------- 1 boincer umatlas       659 Oct 12 08:05 Kp4NDmym3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2jiNDmHPihJn.diag
[2025-10-12 08:05:46] -rw-r--r-- 1 boincer umatlas     20858 Oct 12 08:05 stderr.txt
[2025-10-12 08:05:47] HITS file was successfully produced:
[2025-10-12 08:05:47] -rw------- 1 boincer umatlas 192628915 Oct 12 08:03 shared/HITS.pool.root.1
[2025-10-12 08:05:47]  *** Contents of shared directory: ***
[2025-10-12 08:05:47] total 405324
[2025-10-12 08:05:47] -rw-r--r-- 2 boincer umatlas 220517988 Oct 12 06:13 ATLAS.root_0
[2025-10-12 08:05:47] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:13 start_atlas.sh
[2025-10-12 08:05:47] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 06:13 input.tar.gz
[2025-10-12 08:05:47] -rw------- 1 boincer umatlas 192628915 Oct 12 08:03 HITS.pool.root.1
[2025-10-12 08:05:47] -rw------- 1 boincer umatlas   1310720 Oct 12 08:05 result.tar.gz
08:05:48 (13201): run_atlas exited; CPU time 48950.932966
08:05:48 (13201): called boinc_finish(0)

</stderr_txt>
]]>

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